Pregenerated sensors for NACC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001910Ensembl transcript IDs: ENSMUST00000001975.6, ENSMUST00000238301.2, ENSMUST00000238434.2, ENSMUST00000238449.2, ENSMUST00000238687.2
Found 196 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CGGGAGTCAGGGCCACCTCCTGAGGTGCTTGGAACCAATGGGCTCTaGTGCCCACTCTACAAGCCCTCTCCGCCCCACAGAACTGCCCCC | + |
|
Preference number: 1 (lower is better) Translates to: RESGPPPEVLGTNGL*CPLYKPSPPHRTAP Trigger: GGGGGCAGTTCTGTGGGGCGGAGAGGGCTTGTAGAGTGGGCAGCAGAGCCCATTGGTTCCAAGCACCTCAGGAGGTGGCCCTGACTCCCG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR TCA 90 bp | GTCCTGAGACCCTCACCTGCCCATAGGAGCACTGCTCTCTTGGAATaGCCTCTTGGGCTGAGGGGGCCCACAGAGGCAGAGCAGGGTGGG | + |
|
Preference number: 1 (lower is better) Translates to: VLRPSPAHRSTALLE*PLGLRGPTEAEQGG Trigger: CCCACCCTGCTCTGCCTCTGTGGGCCCCCTCAGCCCAAGAGGTCATTCCAAGAGAGCAGTGCTCCTATGGGCAGGTGAGGGTCTCAGGAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR GCA 90 bp | TGGGCTCTGCTGCCCACTCTACAAGCCCTCTCCGCCCCACAGAACTaGCCCCTTACTAAACCTGGGCAGGGAGCACAGCCTGCGCTCATC | + |
|
Preference number: 1 (lower is better) Translates to: WALLPTLQALSAPQN*PLTKPGQGAQPALI Trigger: GATGAGCGCAGGCTGTGCTCCCTGCCCAGGTTTAGTAAGGGGGCAGTTCTGTGGGGCGGAGAGGGCTTGTAGAGTGGGCAGCAGAGCCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR TCA 90 bp | GGCATTGGCACTTCACATGGGCCAGTGGGTGATGGCCTGTCCCCATaGGAGGCATGGATGGGTGGGAGGGTAGCCACTGGGTTTGCCCCT | + |
|
Preference number: 1 (lower is better) Translates to: GIGTSHGPVGDGLSP*EAWMGGRVATGFAP Trigger: AGGGGCAAACCCAGTGGCTACCCTCCCACCCATCCATGCCTCTCATGGGGACAGGCCATCACCCACTGGCCCATGTGAAGTGCCAATGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR GCA 90 bp | GAGTCAGGGCCACCTCCTGAGGTGCTTGGAACCAATGGGCTCTGCTaGCCACTCTACAAGCCCTCTCCGCCCCACAGAACTGCCCCCTTA | + |
|
Preference number: 1 (lower is better) Translates to: ESGPPPEVLGTNGLC*PLYKPSPPHRTAPL Trigger: TAAGGGGGCAGTTCTGTGGGGCGGAGAGGGCTTGTAGAGTGGGCAGCAGAGCCCATTGGTTCCAAGCACCTCAGGAGGTGGCCCTGACTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR GCA 90 bp | ACTTCCCTCAACCCAAGCCCCGGGAGTCAGGGCCACCTCCTGAGGTaGTTGGAACCAATGGGCTCTGCTGCCCACTCTACAAGCCCTCTC | + |
|
Preference number: 1 (lower is better) Translates to: TSLNPSPGSQGHLLR*LEPMGSAAHSTSPL Trigger: GAGAGGGCTTGTAGAGTGGGCAGCAGAGCCCATTGGTTCCAAGCACCTCAGGAGGTGGCCCTGACTCCCGGGGCTTGGGTTGAGGGAAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR TCA 90 bp | GGGAAATGCCTAAGAGGAAGGGGAACCAGGGCTCCCCGTGAGTGTTaGGGAAGGTCACAGATCCCACCTGATGCCTGTCCTCTCTTGACC | + |
|
Preference number: 1 (lower is better) Translates to: GKCLRGRGTRAPREC*GRSQIPPDACPLLT Trigger: GGTCAAGAGAGGACAGGCATCAGGTGGGATCTGTGACCTTCCTCAACACTCACGGGGAGCCCTGGTTCCCCTTCCTCTTAGGCATTTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR CCA 90 bp | TGGTTGGATCCACAGGAGTCCTGGGGCACTGGGACTGGGCCCCTGTaGAAACATGCACCCACAGTCCACACACACACACATTCAGTCTTC | + |
|
Preference number: 1 (lower is better) Translates to: WLDPQESWGTGTGPL*KHAPTVHTHTHSVF Trigger: GAAGACTGAATGTGTGTGTGTGTGGACTGTGGGTGCATGTTTCCACAGGGGCCCAGTCCCAGTGCCCCAGGACTCCTGTGGATCCAACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR TCA 90 bp | GCACGCACGCACACCCACAAATTCTGCCAGACTGGAAACCTGTCCTaGGACCCTCACCTGCCCATAGGAGCACTGCTCTCTTGGAATGAC | + |
|
Preference number: 1 (lower is better) Translates to: ARTHTHKFCQTGNLS*DPHLPIGALLSWND Trigger: GTCATTCCAAGAGAGCAGTGCTCCTATGGGCAGGTGAGGGTCTCAGGACAGGTTTCCAGTCTGGCAGAATTTGTGGGTGTGCGTGCGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR GCA 90 bp | GAAACATGCACCCACAGTCCACACACACACACATTCAGTCTTCCCTaGATCCTGCCTTCCACAGCCCAGGGACCCAGGGAACCTCAGACA | + |
|
Preference number: 1 (lower is better) Translates to: ETCTHSPHTHTFSLP*ILPSTAQGPREPQT Trigger: TGTCTGAGGTTCCCTGGGTCCCTGGGCTGTGGAAGGCAGGATGCAGGGAAGACTGAATGTGTGTGTGTGTGGACTGTGGGTGCATGTTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR CCA 90 bp | ACAGGAGGGGAGTGTGACATCCATGGAAGGGTCCTGGGCAGGTATTaGAGGACCTTCGCTGAGGGGGCTGTCTGTGTGAAAGCTGTATTC | + |
|
Preference number: 1 (lower is better) Translates to: TGGECDIHGRVLGRY*RTFAEGAVCVKAVF Trigger: GAATACAGCTTTCACACAGACAGCCCCCTCAGCGAAGGTCCTCCAATACCTGCCCAGGACCCTTCCATGGATGTCACACTCCCCTCCTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR GCA 90 bp | AGGGCAGCAGTCTCCCAGCCTGCTCCCTGGTTCCGACCCTGGTCTTaGTGCCTCTTGATCTTCATGTTTTTAAAAGCAAACACTCTACGC | + |
|
Preference number: 1 (lower is better) Translates to: RAAVSQPAPWFRPWS*CLLIFMFLKANTLR Trigger: GCGTAGAGTGTTTGCTTTTAAAAACATGAAGATCAAGAGGCAGCAAGACCAGGGTCGGAACCAGGGAGCAGGCTGGGAGACTGCTGCCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR CCA 90 bp | GGGAGAAGGGCAGCAGTCTCCCAGCCTGCTCCCTGGTTCCGACCCTaGTCTTGCTGCCTCTTGATCTTCATGTTTTTAAAAGCAAACACT | + |
|
Preference number: 1 (lower is better) Translates to: GRRAAVSQPAPWFRP*SCCLLIFMFLKANT Trigger: AGTGTTTGCTTTTAAAAACATGAAGATCAAGAGGCAGCAAGACCAGGGTCGGAACCAGGGAGCAGGCTGGGAGACTGCTGCCCTTCTCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR TCA 90 bp | AGCTGTATTCTATGCCTATCAAGTTCTGCTCTTCCTCATGGTCACTaGGAAAGCTGTTGTAGGCACTGCCCTCTCCTAGGTACAGTGGTT | + |
|
Preference number: 1 (lower is better) Translates to: SCILCLSSSALPHGH*ESCCRHCPLLGTVV Trigger: AACCACTGTACCTAGGAGAGGGCAGTGCCTACAACAGCTTTCTCAGTGACCATGAGGAAGAGCAGAACTTGATAGGCATAGAATACAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR CAA 90 bp | CCTGGGCCCGTGGAGTCCCAAGCAGCCACAGTGAGGGGCAGGCTCTaGTTGAGTCCTGCCCGTCCCCTAGCCGGGCCTGGTGCTGGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: PGPVESQAATVRGRL*LSPARPLAGPGAGK Trigger: TTTCCCAGCACCAGGCCCGGCTAGGGGACGGGCAGGACTCAACAAGAGCCTGCCCCTCACTGTGGCTGCTTGGGACTCCACGGGCCCAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR-3UTR GCA 90 bp | AGCCCCGGGAGTCAGGGCCACCTCCTGAGGTGCTTGGAACCAATGGGCTCTGCTGGGGGCTGGGAGCCCTaGCCAGGGTCGGATGGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: SPGSQGHLLRCLEPMGSAGGWEP*PGSDGR Trigger: TCTCCCATCCGACCCTGGGCAGGGCTCCCAGCCCCC...AGCAGAGCCCATTGGTTCCAAGCACCTCAGGAGGTGGCCCTGACTCCCGGGGCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR-3UTR TCA 90 bp | GGGCAGGGAGCACAGCCTGCGCTCATCCCGGCCAGGCTCAGCTGCTCGCCAAGTGGAAAAGGTGTGGGATaGCAGGGAGGCAGAGGGGCT | + |
|
Preference number: 2 (lower is better) Translates to: GQGAQPALIPARLSCSPSGKGVG*QGGRGA Trigger: AGCCCCTCTGCCTCCCTGTCATCCCACACCTTTTCC...ACTTGGCGAGCAGCTGAGCCTGGCCGGGATGAGCGCAGGCTGTGCTCCCTGCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR-3UTR GCA 90 bp | GGAGGGGTCCAGAAGACCCCTGGGCCCGTGGAGTCCCAAGCAGCCACAGTGAGGGAGGGGCTGGGAGCATaGAGCACCCCTGCAGGTTCT | + |
|
Preference number: 2 (lower is better) Translates to: GGVQKTPGPVESQAATVREGLGA*STPAGS Trigger: AGAACCTGCAGGGGTGCTGCATGCTCCCAGCCCCTC...CCTCACTGTGGCTGCTTGGGACTCCACGGGCCCAGGGGTCTTCTGGACCCCTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR CAA 90 bp | TCCCTCAACCCAAGCCCCGGGAGTCAGGGCCACCTCCTGAGGTGCTaGGAACCAATGGGCTCTGCTGCCCACTCTACAAGCCCTCTCCGC | + |
|
Preference number: 2 (lower is better) Translates to: SLNPSPGSQGHLLRC*EPMGSAAHSTSPLR Trigger: GCGGAGAGGGCTTGTAGAGTGGGCAGCAGAGCCCATTGGTTCCAAGCACCTCAGGAGGTGGCCCTGACTCCCGGGGCTTGGGTTGAGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR-3UTR CCA 90 bp | AAGCCCCGGGAGTCAGGGCCACCTCCTGAGGTGCTTGGAACCAATGGGCTCTGCTCCCAGCCTGCTCCCTaGTTCCGACCCTGGTCTTGC | + |
|
Preference number: 2 (lower is better) Translates to: KPRESGPPPEVLGTNGLCSQPAP*FRPWSC Trigger: GCAAGACCAGGGTCGGAACCAGGGAGCAGGCTGGGA...GCAGAGCCCATTGGTTCCAAGCACCTCAGGAGGTGGCCCTGACTCCCGGGGCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR-3UTR GCA 90 bp | AGCCCCGGGAGTCAGGGCCACCTCCTGAGGTGCTTGGAACCAATGGGCTCTGCTGTCTTCCCTGCATCCTaGCTTCCACAGCCCAGGGAC | + |
|
Preference number: 2 (lower is better) Translates to: SPGSQGHLLRCLEPMGSAVFPAS*LPQPRD Trigger: GTCCCTGGGCTGTGGAAGGCAGGATGCAGGGAAGAC...AGCAGAGCCCATTGGTTCCAAGCACCTCAGGAGGTGGCCCTGACTCCCGGGGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR-3UTR CCA 90 bp | CCCTGGCTTTATACTTCCCTCAACCCAAGCCCCGGGAGTCAGGGCCACCTCCTGGTAGACAGTCCCTCTTaGCCCCACCTACCCCAGCCC | + |
|
Preference number: 2 (lower is better) Translates to: PWLYTSLNPSPGSQGHLLVDSPS*PHLPQP Trigger: GGGCTGGGGTAGGTGGGGCCAAGAGGGACTGTCTAC...CAGGAGGTGGCCCTGACTCCCGGGGCTTGGGTTGAGGGAAGTATAAAGCCAGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR CAA 90 bp | CCCGGCCAGGCTCAGCTGCTCGCCAAGTTATCAGGAGATTGTGCTTaGGGATCTTTGCTGGGGGAGGTGGGTAACAGGCCAGGGCGAGGG | + |
|
Preference number: 2 (lower is better) Translates to: PGQAQLLAKLSGDCA*GSLLGEVGNRPGRG Trigger: CCCTCGCCCTGGCCTGTTACCCACCTCCCCCAGCAAAGATCCCAAAGCACAATCTCCTGATAACTTGGCGAGCAGCTGAGCCTGGCCGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR-3UTR CCA 90 bp | CTGGGGCACTGGGACTGGGCCCCTGTGGAAACATGCACCCACAGTCCACACACAGCCCCTCACAGGTCCTaGGGAGGGACAGACAGTAGA | + |
|
Preference number: 2 (lower is better) Translates to: LGHWDWAPVETCTHSPHTAPHRS*GGTDSR Trigger: TCTACTGTCTGTCCCTCCCCAGGACCTGTGAGGGGC...TGTGTGTGGACTGTGGGTGCATGTTTCCACAGGGGCCCAGTCCCAGTGCCCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR-3UTR CCA 90 bp | CACAGAACTGCCCCCTTACTAAACCTGGGCAGGGAGCACAGCCTGCGCTCATCCCTGCCCAGGGTCGGATaGGAGAAGGGCAGCAGTCTC | + |
|
Preference number: 2 (lower is better) Translates to: HRTAPLLNLGREHSLRSSLPRVG*EKGSSL Trigger: GAGACTGCTGCCCTTCTCCCATCCGACCCTGGGCAG...GGATGAGCGCAGGCTGTGCTCCCTGCCCAGGTTTAGTAAGGGGGCAGTTCTGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR-3UTR CCA 90 bp | AAGCCCCGGGAGTCAGGGCCACCTCCTGAGGTGCTTGGAACCAATGGGCTCTGCCTACTCCCCTCCACTTaGCCACCCAGGGCTAAGGTA | + |
|
Preference number: 2 (lower is better) Translates to: KPRESGPPPEVLGTNGLCLLPST*PPRAKV Trigger: TACCTTAGCCCTGGGTGGCCAAGTGGAGGGGAGTAG...GCAGAGCCCATTGGTTCCAAGCACCTCAGGAGGTGGCCCTGACTCCCGGGGCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR-3UTR TCA 90 bp | AGCCCCGGGAGTCAGGGCCACCTCCTGAGGTGCTTGGAACCAATGGGCTCTGCTGATAGGAGGGGAGTGTaGCATCCAGTAAGGGGGTGT | + |
|
Preference number: 2 (lower is better) Translates to: SPGSQGHLLRCLEPMGSADRRGV*HPVRGC Trigger: ACACCCCCTTACTGGATGTCACACTCCCCTCCTATC...AGCAGAGCCCATTGGTTCCAAGCACCTCAGGAGGTGGCCCTGACTCCCGGGGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR-3UTR TCA 90 bp | CAACCCAAGCCCCGGGAGTCAGGGCCACCTCCTGAGGTGCTTGGAACCAATGGGCAGGTAGGTGATAGGTaGGGGTGTGATAGGAGGGGA | + |
|
Preference number: 2 (lower is better) Translates to: QPKPRESGPPPEVLGTNGQVGDR*GCDRRG Trigger: TCCCCTCCTATCACACCCTCACCTATCACCTACCTG...CCCATTGGTTCCAAGCACCTCAGGAGGTGGCCCTGACTCCCGGGGCTTGGGTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR-3UTR TCA 90 bp | CTGGGGCACTGGGACTGGGCCCCTGTGGAAACATGCACCCACAGTCCACACACAGACAGGAGGGGAGTGTaGCATCCATGGAAGGGTCCT | + |
|
Preference number: 2 (lower is better) Translates to: LGHWDWAPVETCTHSPHTDRRGV*HPWKGP Trigger: AGGACCCTTCCATGGATGTCACACTCCCCTCCTGTC...TGTGTGTGGACTGTGGGTGCATGTTTCCACAGGGGCCCAGTCCCAGTGCCCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR-3UTR GCA 90 bp | CAACCCAAGCCCCGGGAGTCAGGGCCACCTCCTGAGGTGCTTGGAACCAATGGGACCAGTAACAATGGATaGGGACCCTGCCCTGCCTCA | + |
|
Preference number: 2 (lower is better) Translates to: QPKPRESGPPPEVLGTNGTSNNG*GPCPAS Trigger: TGAGGCAGGGCAGGGTCCGCATCCATTGTTACTGGT...CCCATTGGTTCCAAGCACCTCAGGAGGTGGCCCTGACTCCCGGGGCTTGGGTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR-3UTR CCA 90 bp | GGAGGGGTCCAGAAGACCCCTGGGCCCGTGGAGTCCCAAGCAGCCACAGTGAGGCTAGGTACAGTGGTTTaGCCTTGTCAGCCAGCTCTT | + |
|
Preference number: 2 (lower is better) Translates to: GGVQKTPGPVESQAATVRLGTVV*PCQPAL Trigger: AAGAGCTGGCTGACAAGGCCAAACCACTGTACCTAG...CCTCACTGTGGCTGCTTGGGACTCCACGGGCCCAGGGGTCTTCTGGACCCCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR-3UTR TCA 90 bp | GTCCCCATGAGAGGCATGGATGGGTGGGAGGGTAGCCACTGGGTTTGCCCCTACGTGGGGGTATGTATGTaGCAGGAGGGGAGTGTGACA | + |
|
Preference number: 2 (lower is better) Translates to: VPMRGMDGWEGSHWVCPYVGVCM*QEGSVT Trigger: TGTCACACTCCCCTCCTGTCACATACATACCCCCAC...GTAGGGGCAAACCCAGTGGCTACCCTCCCACCCATCCATGCCTCTCATGGGGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR-3UTR TCA 90 bp | GTCCCCATGAGAGGCATGGATGGGTGGGAGGGTAGCCACTGGGTTTGCCCCTACATGCCTGTCCTCTCTTaGCCCAGCCCAGCTTGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: VPMRGMDGWEGSHWVCPYMPVLS*PSPACF Trigger: AAAGCAAGCTGGGCTGGGTCAAGAGAGGACAGGCAT...GTAGGGGCAAACCCAGTGGCTACCCTCCCACCCATCCATGCCTCTCATGGGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR-3UTR CCA 90 bp | CCCTGGCTTTATACTTCCCTCAACCCAAGCCCCGGGAGTCAGGGCCACCTCCTGGCGCTTTTGGAGACATaGAAGCACTGGGGGATGGTG | + |
|
Preference number: 2 (lower is better) Translates to: PWLYTSLNPSPGSQGHLLALLET*KHWGMV Trigger: CACCATCCCCCAGTGCTTCCATGTCTCCAAAAGCGC...CAGGAGGTGGCCCTGACTCCCGGGGCTTGGGTTGAGGGAAGTATAAAGCCAGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR-3UTR GCA 90 bp | GTCCCCATGAGAGGCATGGATGGGTGGGAGGGTAGCCACTGGGTTTGCCCCTACACATTCAGTCTTCCCTaGATCCTGCCTTCCACAGCC | + |
|
Preference number: 2 (lower is better) Translates to: VPMRGMDGWEGSHWVCPYTFSLP*ILPSTA Trigger: GGCTGTGGAAGGCAGGATGCAGGGAAGACTGAATGT...GTAGGGGCAAACCCAGTGGCTACCCTCCCACCCATCCATGCCTCTCATGGGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR-3UTR GCA 90 bp | TGGAACCAATGGGCTCTGCTGCCCACTCTACAAGCCCTCTCCGCCCCACAGAACCAGATTAGAGGGTGCTaGTGGCCTGGAGACAGGTCT | + |
|
Preference number: 2 (lower is better) Translates to: WNQWALLPTLQALSAPQNQIRGC*WPGDRS Trigger: AGACCTGTCTCCAGGCCAGCAGCACCCTCTAATCTG...GTTCTGTGGGGCGGAGAGGGCTTGTAGAGTGGGCAGCAGAGCCCATTGGTTCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR-3UTR CCA 90 bp | CCCTGTGCTCACATGTCAAACTCAAGACACCCAAAAGACTGCTCCTGGAGAGCTGGGAGGCAGAGGGGCTaGGAGCATGCAGCACCCCTG | + |
|
Preference number: 2 (lower is better) Translates to: PCAHMSNSRHPKDCSWRAGRQRG*EHAAPL Trigger: CAGGGGTGCTGCATGCTCCCAGCCCCTCTGCCTCCC...AGCTCTCCAGGAGCAGTCTTTTGGGTGTCTTGAGTTTGACATGTGAGCACAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR-3UTR CCA 90 bp | CCCACAGTCCACACACACACACATTCAGTCTTCCCTGCATCCTGCCTTCCACAGAGCACTGGGGGATGGTaGGAGGGGTCCAGAAGACCC | + |
|
Preference number: 2 (lower is better) Translates to: PTVHTHTHSVFPASCLPQSTGGW*EGSRRP Trigger: GGGTCTTCTGGACCCCTCCCACCATCCCCCAGTGCT...CTGTGGAAGGCAGGATGCAGGGAAGACTGAATGTGTGTGTGTGTGGACTGTGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR-3UTR TCA 90 bp | CCTCCTGAGGTGCTTGGAACCAATGGGCTCTGCTGCCCACTCTACAAGCCCTCTACTGGAAACCTGTCCTaGGACCCTCACCTGCCCATA | + |
|
Preference number: 2 (lower is better) Translates to: PPEVLGTNGLCCPLYKPSTGNLS*DPHLPI Trigger: TATGGGCAGGTGAGGGTCTCAGGACAGGTTTCCAGT...AGAGGGCTTGTAGAGTGGGCAGCAGAGCCCATTGGTTCCAAGCACCTCAGGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR-3UTR TCA 90 bp | CCTCCTGAGGTGCTTGGAACCAATGGGCTCTGCTGCCCACTCTACAAGCCCTCTCGGAGGGAGGGGGTATaGCTAAGGTGCTTGTGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: PPEVLGTNGLCCPLYKPSRREGV*LRCLCF Trigger: AAAGCACAAGCACCTTAGTCATACCCCCTCCCTCCG...AGAGGGCTTGTAGAGTGGGCAGCAGAGCCCATTGGTTCCAAGCACCTCAGGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR-3UTR GCA 90 bp | CCCTGTGCTCACATGTCAAACTCAAGACACCCAAAAGACTGCTCCTGGAGAGCTATGCGGACCCTGCCCTaGCTCATCCCCCAGGAGTGG | + |
|
Preference number: 2 (lower is better) Translates to: PCAHMSNSRHPKDCSWRAMRTLP*LIPQEW Trigger: CCACTCCTGGGGGATGAGGCAGGGCAGGGTCCGCAT...AGCTCTCCAGGAGCAGTCTTTTGGGTGTCTTGAGTTTGACATGTGAGCACAGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR-3UTR CCA 90 bp | CACAGAACTGCCCCCTTACTAAACCTGGGCAGGGAGCACAGCCTGCGCTCATCCACAGGAAGGCGCTTTTaGAGACATGGAAGCACTGGG | + |
|
Preference number: 2 (lower is better) Translates to: HRTAPLLNLGREHSLRSSTGRRF*RHGSTG Trigger: CCCAGTGCTTCCATGTCTCCAAAAGCGCCTTCCTGT...GGATGAGCGCAGGCTGTGCTCCCTGCCCAGGTTTAGTAAGGGGGCAGTTCTGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR-3UTR TCA 90 bp | TGGAACCAATGGGCTCTGCTGCCCACTCTACAAGCCCTCTCCGCCCCACAGAACCTTCCTCATGGTCACTaGGAAAGCTGTTGTAGGCAC | + |
|
Preference number: 2 (lower is better) Translates to: WNQWALLPTLQALSAPQNLPHGH*ESCCRH Trigger: GTGCCTACAACAGCTTTCTCAGTGACCATGAGGAAG...GTTCTGTGGGGCGGAGAGGGCTTGTAGAGTGGGCAGCAGAGCCCATTGGTTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR-3UTR GCA 90 bp | CCTCCTGAGGTGCTTGGAACCAATGGGCTCTGCTGCCCACTCTACAAGCCCTCTGTGCTTTGGGATCTTTaGTGGGGGAGGTGGGTAACA | + |
|
Preference number: 2 (lower is better) Translates to: PPEVLGTNGLCCPLYKPSVLWDL*WGRWVT Trigger: TGTTACCCACCTCCCCCAGCAAAGATCCCAAAGCAC...AGAGGGCTTGTAGAGTGGGCAGCAGAGCCCATTGGTTCCAAGCACCTCAGGAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR-3UTR GCA 90 bp | AGCCCCGGGAGTCAGGGCCACCTCCTGAGGTGCTTGGAACCAATGGGCTCTGCTGTTATCAGGAGATTGTaGTTTGGGATCTTTGCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: SPGSQGHLLRCLEPMGSAVIRRL*FGIFAG Trigger: CCCAGCAAAGATCCCAAAGCACAATCTCCTGATAAC...AGCAGAGCCCATTGGTTCCAAGCACCTCAGGAGGTGGCCCTGACTCCCGGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR-3UTR GCA 90 bp | CCCTGTGCTCACATGTCAAACTCAAGACACCCAAAAGACTGCTCCTGGAGAGCTAGCATGCAGCACCCCTaGAGGTTCTGGGGAGGGACA | + |
|
Preference number: 2 (lower is better) Translates to: PCAHMSNSRHPKDCSWRASMQHP*RFWGGT Trigger: TGTCCCTCCCCAGAACCTGCAGGGGTGCTGCATGCT...AGCTCTCCAGGAGCAGTCTTTTGGGTGTCTTGAGTTTGACATGTGAGCACAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR-3UTR GCA 90 bp | CCTCCTGAGGTGCTTGGAACCAATGGGCTCTGCTGCCCACTCTACAAGCCCTCTCACCTTCTCCAATCCTaGAAACCCCTGCCTCTGAAA | + |
|
Preference number: 2 (lower is better) Translates to: PPEVLGTNGLCCPLYKPSHLLQS*KPLPLK Trigger: TTTCAGAGGCAGGGGTTTGCAGGATTGGAGAAGGTG...AGAGGGCTTGTAGAGTGGGCAGCAGAGCCCATTGGTTCCAAGCACCTCAGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR-3UTR CCA 90 bp | CTGGGGCACTGGGACTGGGCCCCTGTGGAAACATGCACCCACAGTCCACACACATTCTGCTCTTCCTCATaGTCACTGAGAAAGCTGTTG | + |
|
Preference number: 2 (lower is better) Translates to: LGHWDWAPVETCTHSPHTFCSSS*SLRKLL Trigger: CAACAGCTTTCTCAGTGACCATGAGGAAGAGCAGAA...TGTGTGTGGACTGTGGGTGCATGTTTCCACAGGGGCCCAGTCCCAGTGCCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR-3UTR CCA 90 bp | TCATGGCAGATTAGAGGGTGCTGCTGGCCTGGAGACAGGTCTCCAGATCTGACTTCCATGGAAGGGTCCTaGGCAGGTATTGGAGGACCT | + |
|
Preference number: 2 (lower is better) Translates to: SWQIRGCCWPGDRSPDLTSMEGS*AGIGGP Trigger: AGGTCCTCCAATACCTGCCCAGGACCCTTCCATGGA...AGTCAGATCTGGAGACCTGTCTCCAGGCCAGCAGCACCCTCTAATCTGCCATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR-3UTR CCA 90 bp | AGAAACCCTGTGCTCACATGTCAAACTCAAGACACCCAAAAGACTGCTCCTGGAGGTCCAGAAGACCCCTaGGCCCGTGGAGTCCCAAGC | + |
|
Preference number: 2 (lower is better) Translates to: RNPVLTCQTQDTQKTAPGGPEDP*ARGVPS Trigger: GCTTGGGACTCCACGGGCCCAGGGGTCTTCTGGACC...TCCAGGAGCAGTCTTTTGGGTGTCTTGAGTTTGACATGTGAGCACAGGGTTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR-3UTR GCA 90 bp | GATCTTCATGTTTTTAAAAGCAAACACTCTACGCAGGCACGCACGCACACACGCACCCCAGCCCCAAGGTaGAGGGACAGACGAGAGGGA | + |
|
Preference number: 2 (lower is better) Translates to: DLHVFKSKHSTQARTHTRTPAPR*RDRREG Trigger: TCCCTCTCGTCTGTCCCTGCACCTTGGGGCTGGGGT...GCGTGTGTGCGTGCGTGCCTGCGTAGAGTGTTTGCTTTTAAAAACATGAAGATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR CAA 90 bp | GTCTCCCAGCCTGCTCCCTGGTTCCGACCCTGGTCTTGCTGCCTCTaGATCTTCATGTTTTTAAAAGCAAACACTCTACGCAGGCACGCA | + |
|
Preference number: 2 (lower is better) Translates to: VSQPAPWFRPWSCCL*IFMFLKANTLRRHA Trigger: TGCGTGCCTGCGTAGAGTGTTTGCTTTTAAAAACATGAAGATCAAGAGGCAGCAAGACCAGGGTCGGAACCAGGGAGCAGGCTGGGAGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR CAA 90 bp | AAGGGCAGCAGTCTCCCAGCCTGCTCCCTGGTTCCGACCCTGGTCTaGCTGCCTCTTGATCTTCATGTTTTTAAAAGCAAACACTCTACG | + |
|
Preference number: 2 (lower is better) Translates to: KGSSLPACSLVPTLV*LPLDLHVFKSKHST Trigger: CGTAGAGTGTTTGCTTTTAAAAACATGAAGATCAAGAGGCAGCAAGACCAGGGTCGGAACCAGGGAGCAGGCTGGGAGACTGCTGCCCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR-3UTR GCA 90 bp | CCCACAGTCCACACACACACACATTCAGTCTTCCCTGCATCCTGCCTTCCACAGCGACCCTGGTCTTGCTaGCTCTTGATCTTCATGTTT | + |
|
Preference number: 2 (lower is better) Translates to: PTVHTHTHSVFPASCLPQRPWSC*LLIFMF Trigger: AAACATGAAGATCAAGAGGCAGCAAGACCAGGGTCG...CTGTGGAAGGCAGGATGCAGGGAAGACTGAATGTGTGTGTGTGTGGACTGTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR-3UTR GCA 90 bp | CCTCCTGAGGTGCTTGGAACCAATGGGCTCTGCTGCCCACTCTACAAGCCCTCTGTAACAGAAACCCTGTaGTCACATGTCAAACTCAAG | + |
|
Preference number: 2 (lower is better) Translates to: PPEVLGTNGLCCPLYKPSVTETL*SHVKLK Trigger: CTTGAGTTTGACATGTGAGCACAGGGTTTCTGTTAC...AGAGGGCTTGTAGAGTGGGCAGCAGAGCCCATTGGTTCCAAGCACCTCAGGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR-3UTR TCA 90 bp | GATCTTCATGTTTTTAAAAGCAAACACTCTACGCAGGCACGCACGCACACACGCGTCACAGATCCCACCTaGTGCCTGTCCTCTCTTGAC | + |
|
Preference number: 2 (lower is better) Translates to: DLHVFKSKHSTQARTHTRVTDPT*CLSSLD Trigger: GTCAAGAGAGGACAGGCATCAGGTGGGATCTGTGAC...GCGTGTGTGCGTGCGTGCCTGCGTAGAGTGTTTGCTTTTAAAAACATGAAGATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR-3UTR CCA 90 bp | AGTTTCTCTAAGCCTTTTGGGCTTGTTTCCTCAGTTTGTAAAGTAGACAGTCCCGGAAGCACTGGGGGATaGTGGGAGGGGTCCAGAAGA | + |
|
Preference number: 2 (lower is better) Translates to: SFSKPFGLVSSVCKVDSPGSTGG*WEGSRR Trigger: TCTTCTGGACCCCTCCCACCATCCCCCAGTGCTTCC...GGGACTGTCTACTTTACAAACTGAGGAAACAAGCCCAAAAGGCTTAGAGAAACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR-3UTR GCA 90 bp | TCTCTTGACCCAGCCCAGCTTGCTTTGGGGAAAAGGTGTGGGATGACAGGGAGGGAAAGCTGTATTCTATaGCTATCAAGTTCTGCTCTT | + |
|
Preference number: 2 (lower is better) Translates to: SLDPAQLALGKRCGMTGRESCIL*LSSSAL Trigger: AAGAGCAGAACTTGATAGGCATAGAATACAGCTTTC...CCTCCCTGTCATCCCACACCTTTTCCCCAAAGCAAGCTGGGCTGGGTCAAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR-3UTR GCA 90 bp | GTGAAAGCTGTATTCTATGCCTATCAAGTTCTGCTCTTCCTCATGGTCACTGAGAGCTGTTGTAGGCACTaGCCTCTCCTAGGTACAGTG | + |
|
Preference number: 2 (lower is better) Translates to: VKAVFYAYQVLLFLMVTESCCRH*PLLGTV Trigger: CACTGTACCTAGGAGAGGGCAGTGCCTACAACAGCT...CTCAGTGACCATGAGGAAGAGCAGAACTTGATAGGCATAGAATACAGCTTTCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR CCA 72 bp | GTTGAGTCCTGCCCGTCCCCTAGCCGGGCCTGGTGCTaGGAAATGCCTAAGAGGAAGGGGAACCAGGGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: VESCPSPSRAWC*EMPKRKGNQGS Trigger: GGAGCCCTGGTTCCCCTTCCTCTTAGGCATTTCCCAGCACCAGGCCCGGCTAGGGGACGGGCAGGACTCAAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR GCA 72 bp | CTTGTTGAGTCCTGCCCGTCCCCTAGCCGGGCCTGGTaGTGGGAAATGCCTAAGAGGAAGGGGAACCAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: LVESCPSPSRAW*WEMPKRKGNQG Trigger: GCCCTGGTTCCCCTTCCTCTTAGGCATTTCCCAGCACCAGGCCCGGCTAGGGGACGGGCAGGACTCAACAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR CCA 72 bp | CGGGGGAGAGGAAGCTGGTTGGATCCACAGGAGTCCTaGGGCACTGGGACTGGGCCCCTGTGGAAACATGCA | + |
|
Preference number: 3 (lower is better) Translates to: RGRGSWLDPQES*GTGTGPLWKHA Trigger: TGCATGTTTCCACAGGGGCCCAGTCCCAGTGCCCCAGGACTCCTGTGGATCCAACCAGCTTCCTCTCCCCCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR TCA 72 bp | CCCTCACCTGCCCATAGGAGCACTGCTCTCTTGGAATaGCCTCTTGGGCTGAGGGGGCCCACAGAGGCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: PSPAHRSTALLE*PLGLRGPTEAE Trigger: CTCTGCCTCTGTGGGCCCCCTCAGCCCAAGAGGTCATTCCAAGAGAGCAGTGCTCCTATGGGCAGGTGAGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR GCA 72 bp | AACCCAAGCCCCGGGAGTCAGGGCCACCTCCTGAGGTaGTTGGAACCAATGGGCTCTGCTGCCCACTCTACA | + |
|
Preference number: 3 (lower is better) Translates to: NPSPGSQGHLLR*LEPMGSAAHST Trigger: TGTAGAGTGGGCAGCAGAGCCCATTGGTTCCAAGCACCTCAGGAGGTGGCCCTGACTCCCGGGGCTTGGGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR CCA 72 bp | GCTCTTGTTGAGTCCTGCCCGTCCCCTAGCCGGGCCTaGTGCTGGGAAATGCCTAAGAGGAAGGGGAACCAG | + |
|
Preference number: 3 (lower is better) Translates to: ALVESCPSPSRA*CWEMPKRKGNQ Trigger: CTGGTTCCCCTTCCTCTTAGGCATTTCCCAGCACCAGGCCCGGCTAGGGGACGGGCAGGACTCAACAAGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR-3UTR CAA 90 bp | AAGCCCCGGGAGTCAGGGCCACCTCCTGAGGTGCTTGGAACCAATGGGCTCTGCCCTAGGTACAGTGGTTaGGCCTTGTCAGCCAGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: KPRESGPPPEVLGTNGLCPRYSG*ALSASS Trigger: AGAGCTGGCTGACAAGGCCAAACCACTGTACCTAGG...GCAGAGCCCATTGGTTCCAAGCACCTCAGGAGGTGGCCCTGACTCCCGGGGCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR-3UTR CAA 90 bp | CACAGAACTGCCCCCTTACTAAACCTGGGCAGGGAGCACAGCCTGCGCTCATCCGGGAGAGGAAGCTGGTaGGATCCACAGGAGTCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: HRTAPLLNLGREHSLRSSGRGSW*DPQESW Trigger: CCAGGACTCCTGTGGATCCAACCAGCTTCCTCTCCC...GGATGAGCGCAGGCTGTGCTCCCTGCCCAGGTTTAGTAAGGGGGCAGTTCTGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR CCA 72 bp | TGGATGCGGACCCTGCCCTGCCTCATCCCCCAGGAGTaGGCTCAGCTAACTGGGACCTGTGAACACCCTAAA | + |
|
Preference number: 3 (lower is better) Translates to: WMRTLPCLIPQE*AQLTGTCEHPK Trigger: TTTAGGGTGTTCACAGGTCCCAGTTAGCTGAGCCCACTCCTGGGGGATGAGGCAGGGCAGGGTCCGCATCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR-3UTR CAA 90 bp | TGGAACCAATGGGCTCTGCTGCCCACTCTACAAGCCCTCTCCGCCCCACAGAACTTGACCCAGCCCAGCTaGCTTTGGGGAAAAGGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: WNQWALLPTLQALSAPQNLTQPS*LWGKGV Trigger: CACACCTTTTCCCCAAAGCAAGCTGGGCTGGGTCAA...GTTCTGTGGGGCGGAGAGGGCTTGTAGAGTGGGCAGCAGAGCCCATTGGTTCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR TCA 72 bp | CTAAGAGGAAGGGGAACCAGGGCTCCCCGTGAGTGTTaGGGAAGGTCACAGATCCCACCTGATGCCTGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: LRGRGTRAPREC*GRSQIPPDACP Trigger: AGGACAGGCATCAGGTGGGATCTGTGACCTTCCTCAACACTCACGGGGAGCCCTGGTTCCCCTTCCTCTTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR GCA 72 bp | GTCCACACACACACACATTCAGTCTTCCCTGCATCCTaGCTTCCACAGCCCAGGGACCCAGGGAACCTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: VHTHTHSVFPAS*LPQPRDPGNLR Trigger: TCTGAGGTTCCCTGGGTCCCTGGGCTGTGGAAGGCAGGATGCAGGGAAGACTGAATGTGTGTGTGTGTGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR GCA 72 bp | ACCCACAGTCCACACACACACACATTCAGTCTTCCCTaGATCCTGCCTTCCACAGCCCAGGGACCCAGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: THSPHTHTFSLP*ILPSTAQGPRE Trigger: TTCCCTGGGTCCCTGGGCTGTGGAAGGCAGGATGCAGGGAAGACTGAATGTGTGTGTGTGTGGACTGTGGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR GCA 72 bp | TCGCCAAGTTATCAGGAGATTGTGCTTTGGGATCTTTaGTGGGGGAGGTGGGTAACAGGCCAGGGCGAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: SPSYQEIVLWDL*WGRWVTGQGEG Trigger: GCCCTCGCCCTGGCCTGTTACCCACCTCCCCCAGCAAAGATCCCAAAGCACAATCTCCTGATAACTTGGCGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR-3UTR CAA 90 bp | CCCTGTGCTCACATGTCAAACTCAAGACACCCAAAAGACTGCTCCTGGAGAGCTAGGGGCAGGCTCTTGTaGAGTCCTGCCCGTCCCCTA | + |
|
Preference number: 3 (lower is better) Translates to: PCAHMSNSRHPKDCSWRARGRLL*SPARPL Trigger: TAGGGGACGGGCAGGACTCAACAAGAGCCTGCCCCT...AGCTCTCCAGGAGCAGTCTTTTGGGTGTCTTGAGTTTGACATGTGAGCACAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR TCA 72 bp | CCACAGAGGCAGAGCAGGGTGGGACTAAAAGGGGCGTaGTGGAGGCTGTCACAGAGGGTCAGTTCTAGAGTT | + |
|
Preference number: 3 (lower is better) Translates to: PQRQSRVGLKGA*WRLSQRVSSRV Trigger: AACTCTAGAACTGACCCTCTGTGACAGCCTCCATCACGCCCCTTTTAGTCCCACCCTGCTCTGCCTCTGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR TCA 72 bp | GAGGGTGCTGCTGGCCTGGAGACAGGTCTCCAGATCTaGCTCAAAAGGCTCCATCCCACCTTCTCCAATCCT | + |
|
Preference number: 3 (lower is better) Translates to: EGAAGLETGLQI*LKRLHPTFSNP Trigger: AGGATTGGAGAAGGTGGGATGGAGCCTTTTGAGTCAGATCTGGAGACCTGTCTCCAGGCCAGCAGCACCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR CCA 72 bp | GAGTGTGACATCCATGGAAGGGTCCTGGGCAGGTATTaGAGGACCTTCGCTGAGGGGGCTGTCTGTGTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: ECDIHGRVLGRY*RTFAEGAVCVK Trigger: TTTCACACAGACAGCCCCCTCAGCGAAGGTCCTCCAATACCTGCCCAGGACCCTTCCATGGATGTCACACTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR-3UTR CAA 90 bp | TCATGGCAGATTAGAGGGTGCTGCTGGCCTGGAGACAGGTCTCCAGATCTGACTGACAGGAAGGCGCTTTaGGAGACATGGAAGCACTGG | + |
|
Preference number: 3 (lower is better) Translates to: SWQIRGCCWPGDRSPDLTDRKAL*ETWKHW Trigger: CCAGTGCTTCCATGTCTCCAAAAGCGCCTTCCTGTC...AGTCAGATCTGGAGACCTGTCTCCAGGCCAGCAGCACCCTCTAATCTGCCATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR TCA 72 bp | CACACCCACAAATTCTGCCAGACTGGAAACCTGTCCTaGGACCCTCACCTGCCCATAGGAGCACTGCTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: HTHKFCQTGNLS*DPHLPIGALLS Trigger: AGAGAGCAGTGCTCCTATGGGCAGGTGAGGGTCTCAGGACAGGTTTCCAGTCTGGCAGAATTTGTGGGTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR-3UTR CAA 90 bp | GGGCCACCTCCTGAGGTGCTTGGAACCAATGGGCTCTGCTGCCCACTCTACAAGGTTTCTCTAAGCCTTTaGGGCTTGTTTCCTCAGTTT | + |
|
Preference number: 3 (lower is better) Translates to: GPPPEVLGTNGLCCPLYKVSLSL*GLFPQF Trigger: AAACTGAGGAAACAAGCCCAAAAGGCTTAGAGAAAC...CTTGTAGAGTGGGCAGCAGAGCCCATTGGTTCCAAGCACCTCAGGAGGTGGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR CCA 72 bp | GCAGCAGTCTCCCAGCCTGCTCCCTGGTTCCGACCCTaGTCTTGCTGCCTCTTGATCTTCATGTTTTTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: AAVSQPAPWFRP*SCCLLIFMFLK Trigger: TTTTAAAAACATGAAGATCAAGAGGCAGCAAGACCAGGGTCGGAACCAGGGAGCAGGCTGGGAGACTGCTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR-3UTR CAA 90 bp | CTGGGGCACTGGGACTGGGCCCCTGTGGAAACATGCACCCACAGTCCACACACATGGTCTTGCTGCCTCTaGATCTTCATGTTTTTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: LGHWDWAPVETCTHSPHTWSCCL*IFMFLK Trigger: TTTTAAAAACATGAAGATCAAGAGGCAGCAAGACCA...TGTGTGTGGACTGTGGGTGCATGTTTCCACAGGGGCCCAGTCCCAGTGCCCCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR GCA 72 bp | GTCTCCCAGCCTGCTCCCTGGTTCCGACCCTGGTCTTaGTGCCTCTTGATCTTCATGTTTTTAAAAGCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: VSQPAPWFRPWS*CLLIFMFLKAN Trigger: GTTTGCTTTTAAAAACATGAAGATCAAGAGGCAGCAAGACCAGGGTCGGAACCAGGGAGCAGGCTGGGAGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR TCA 72 bp | CTATGCCTATCAAGTTCTGCTCTTCCTCATGGTCACTaGGAAAGCTGTTGTAGGCACTGCCCTCTCCTAGGT | + |
|
Preference number: 3 (lower is better) Translates to: LCLSSSALPHGH*ESCCRHCPLLG Trigger: ACCTAGGAGAGGGCAGTGCCTACAACAGCTTTCTCAGTGACCATGAGGAAGAGCAGAACTTGATAGGCATAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR GCA 72 bp | TCCCAGCCTGCTCCCTGGTTCCGACCCTGGTCTTGCTaGCTCTTGATCTTCATGTTTTTAAAAGCAAACACT | + |
|
Preference number: 3 (lower is better) Translates to: SQPAPWFRPWSC*LLIFMFLKANT Trigger: AGTGTTTGCTTTTAAAAACATGAAGATCAAGAGGCAGCAAGACCAGGGTCGGAACCAGGGAGCAGGCTGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| CDS-3UTR GCA 90 bp | CAACCCAAGCCCCGGGAGTCAGGGCCACCTCCTGAGGTGCTTGGAACCAATGGGGGGGCCTCCTCCGGGTaGAGGCCCTGGGAGTCGCAA | + |
|
Preference number: 4 (lower is better) Translates to: QPKPRESGPPPEVLGTNGGASSG*RPWESQ Trigger: TTGCGACTCCCAGGGCCTGCACCCGGAGGAGGCCCC...CCCATTGGTTCCAAGCACCTCAGGAGGTGGCCCTGACTCCCGGGGCTTGGGTTG 68% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| CDS-3UTR TCA 90 bp | GGGCAGGGAGCACAGCCTGCGCTCATCCCGGCCAGGCTCAGCTGCTCGCCAAGTGAGGATCTGCTGGAATaGCTGTGGCTGCACAGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: GQGAQPALIPARLSCSPSEDLLE*LWLHSG Trigger: GCCGCTGTGCAGCCACAGTCATTCCAGCAGATCCTC...ACTTGGCGAGCAGCTGAGCCTGGCCGGGATGAGCGCAGGCTGTGCTCCCTGCCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR CAA 72 bp | GTGGAGTCCCAAGCAGCCACAGTGAGGGGCAGGCTCTaGTTGAGTCCTGCCCGTCCCCTAGCCGGGCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VESQAATVRGRL*LSPARPLAGPG Trigger: ACCAGGCCCGGCTAGGGGACGGGCAGGACTCAACAAGAGCCTGCCCCTCACTGTGGCTGCTTGGGACTCCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| CDS-3UTR CCA 90 bp | GGGCAGGGAGCACAGCCTGCGCTCATCCCGGCCAGGCTCAGCTGCTCGCCAAGTGTCTGGGGTCATTGGTaGAAGAACGGATGCCGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GQGAQPALIPARLSCSPSVWGHW*KNGCRC Trigger: GCACCGGCATCCGTTCTTCCACCAATGACCCCAGAC...ACTTGGCGAGCAGCTGAGCCTGGCCGGGATGAGCGCAGGCTGTGCTCCCTGCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| CDS-3UTR TCA 90 bp | AAGCCCCGGGAGTCAGGGCCACCTCCTGAGGTGCTTGGAACCAATGGGCTCTGCCTGGAGAACCTCAGCTaGAGGGCCAGCCTCGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: KPRESGPPPEVLGTNGLCLENLS*RASLAI Trigger: GATGGCGAGGCTGGCCCTTCAGCTGAGGTTCTCCAG...GCAGAGCCCATTGGTTCCAAGCACCTCAGGAGGTGGCCCTGACTCCCGGGGCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR CAA 72 bp | CCAAGCCCCGGGAGTCAGGGCCACCTCCTGAGGTGCTaGGAACCAATGGGCTCTGCTGCCCACTCTACAAGC | + |
|
Preference number: 4 (lower is better) Translates to: PSPGSQGHLLRC*EPMGSAAHSTS Trigger: GCTTGTAGAGTGGGCAGCAGAGCCCATTGGTTCCAAGCACCTCAGGAGGTGGCCCTGACTCCCGGGGCTTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| CDS-3UTR TCA 90 bp | GGGCAGGGAGCACAGCCTGCGCTCATCCCGGCCAGGCTCAGCTGCTCGCCAAGTTCTGGCAGTAGTACTTaGCAGCATGGAGGACACGAC | + |
|
Preference number: 4 (lower is better) Translates to: GQGAQPALIPARLSCSPSSGSST*QHGGHD Trigger: GTCGTGTCCTCCATGCTGTCAAGTACTACTGCCAGA...ACTTGGCGAGCAGCTGAGCCTGGCCGGGATGAGCGCAGGCTGTGCTCCCTGCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| CDS-3UTR GCA 90 bp | GGGCAGGGAGCACAGCCTGCGCTCATCCCGGCCAGGCTCAGCTGCTCGCCAAGTTGTGCCCTCCTCACCTaGATCTTCTTCTTCGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GQGAQPALIPARLSCSPSCALLT*IFFFVL Trigger: GAGGACGAAGAAGAAGATGCAGGTGAGGAGGGCACA...ACTTGGCGAGCAGCTGAGCCTGGCCGGGATGAGCGCAGGCTGTGCTCCCTGCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| CDS-3UTR GCA 90 bp | CTGGGGCACTGGGACTGGGCCCCTGTGGAAACATGCACCCACAGTCCACACACACGCAGCAAGACCTTGTaGCGCGTGCCTGCACTGACG | + |
|
Preference number: 4 (lower is better) Translates to: LGHWDWAPVETCTHSPHTRSKTL*RVPALT Trigger: CGTCAGTGCAGGCACGCGGCACAAGGTCTTGCTGCG...TGTGTGTGGACTGTGGGTGCATGTTTCCACAGGGGCCCAGTCCCAGTGCCCCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| CDS-3UTR TCA 90 bp | AAGCCCCGGGAGTCAGGGCCACCTCCTGAGGTGCTTGGAACCAATGGGCTCTGCCACTGCGGCTGCTGTTaGAGAGGTCCCGGAAGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: KPRESGPPPEVLGTNGLCHCGCC*RGPGSK Trigger: CTTACTTCCGGGACCTCTTCAACAGCAGCCGCAGTG...GCAGAGCCCATTGGTTCCAAGCACCTCAGGAGGTGGCCCTGACTCCCGGGGCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| CDS-3UTR TCA 90 bp | AGCAGCCACAGTGAGGGGCAGGCTCTTGTTGAGTCCTGCCCGTCCCCTAGCCGGACTCCTGTTCTGTCTTaGCCCGTGACACAAGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SSHSEGQALVESCPSPSRTPVLS*PVTQGA Trigger: TGCCCCTTGTGTCACGGGTCAAGACAGAACAGGAGT...CCGGCTAGGGGACGGGCAGGACTCAACAAGAGCCTGCCCCTCACTGTGGCTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| CDS-3UTR GCA 90 bp | CTGGGGCACTGGGACTGGGCCCCTGTGGAAACATGCACCCACAGTCCACACACACAGCCTCCTTCTGGCTaGTGTCCCACAGCCTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LGHWDWAPVETCTHSPHTQPPSG*CPTASW Trigger: CCAAGAGGCTGTGGGACAGCAGCCAGAAGGAGGCTG...TGTGTGTGGACTGTGGGTGCATGTTTCCACAGGGGCCCAGTCCCAGTGCCCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| CDS-3UTR GCA 90 bp | AAGCCCCGGGAGTCAGGGCCACCTCCTGAGGTGCTTGGAACCAATGGGCTCTGCCACACATCCCCCTACTaGAACCACAGCCACTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KPRESGPPPEVLGTNGLCHTSPY*NHSHCC Trigger: GCAGCAGTGGCTGTGGTTGCAGTAGGGGGATGTGTG...GCAGAGCCCATTGGTTCCAAGCACCTCAGGAGGTGGCCCTGACTCCCGGGGCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| CDS-3UTR GCA 90 bp | GATGTCTACTCCCCTCCACTTGGCCACCCAGGGCTAAGGTACTGGGGGCCAAGTCGTTGTTGCCACCACTaGCTCCAGCCTCCTTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: DVYSPPLGHPGLRYWGPSRCCHH*LQPPSG Trigger: GCCAGAAGGAGGCTGGAGGCAGTGGTGGCAACAACG...ACTTGGCCCCCAGTACCTTAGCCCTGGGTGGCCAAGTGGAGGGGAGTAGACATC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| CDS-3UTR GCA 90 bp | CCCTGGCTTTATACTTCCCTCAACCCAAGCCCCGGGAGTCAGGGCCACCTCCTGTGGTCCGCTCTGACATaGTGGGCCCACTCACACATC | + |
|
Preference number: 4 (lower is better) Translates to: PWLYTSLNPSPGSQGHLLWSALT*WAHSHI Trigger: GATGTGTGAGTGGGCCCAGCATGTCAGAGCGGACCA...CAGGAGGTGGCCCTGACTCCCGGGGCTTGGGTTGAGGGAAGTATAAAGCCAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| CDS-3UTR GCA 90 bp | GTCCCCATGAGAGGCATGGATGGGTGGGAGGGTAGCCACTGGGTTTGCCCCTACCTTGTGCCGCGTGCCTaGACTGACGTGGCAGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: VPMRGMDGWEGSHWVCPYLVPRA*TDVAVH Trigger: ATGAACTGCCACGTCAGTGCAGGCACGCGGCACAAG...GTAGGGGCAAACCCAGTGGCTACCCTCCCACCCATCCATGCCTCTCATGGGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| CDS-3UTR CCA 90 bp | GATGTCTACTCCCCTCCACTTGGCCACCCAGGGCTAAGGTACTGGGGGCCAAGTCTGGCGTGGAGAACTTaGCCATCTTGCGGCTGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: DVYSPPLGHPGLRYWGPSLAWRT*PSCGCR Trigger: ACGGCAGCCGCAAGATGGCCAAGTTCTCCACGCCAG...ACTTGGCCCCCAGTACCTTAGCCCTGGGTGGCCAAGTGGAGGGGAGTAGACATC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| CDS-3UTR GCA 90 bp | GGGCCACCTCCTGAGGTGCTTGGAACCAATGGGCTCTGCTGCCCACTCTACAAGTTCAGCTGGGAGAGATaGCAGGTCTTGCCGCACTCG | + |
|
Preference number: 4 (lower is better) Translates to: GPPPEVLGTNGLCCPLYKFSWER*QVLPHS Trigger: CGAGTGCGGCAAGACCTGGCATCTCTCCCAGCTGAA...CTTGTAGAGTGGGCAGCAGAGCCCATTGGTTCCAAGCACCTCAGGAGGTGGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| CDS-3UTR CCA 90 bp | CCTCCTGAGGTGCTTGGAACCAATGGGCTCTGCTGCCCACTCTACAAGCCCTCTGGGCCAGGTCTGGCGTaGAGAACTTGGCCATCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: PPEVLGTNGLCCPLYKPSGPGLA*RTWPSC Trigger: GCAAGATGGCCAAGTTCTCCACGCCAGACCTGGCCC...AGAGGGCTTGTAGAGTGGGCAGCAGAGCCCATTGGTTCCAAGCACCTCAGGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| CDS-3UTR GCA 90 bp | GATGTCTACTCCCCTCCACTTGGCCACCCAGGGCTAAGGTACTGGGGGCCAAGTAGTCCCTGTAGCCGCTaGTCATTGAGGCACTCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: DVYSPPLGHPGLRYWGPSSPCSR*SLRHSR Trigger: CCTTGAGTGCCTCAATGAGCAGCGGCTACAGGGACT...ACTTGGCCCCCAGTACCTTAGCCCTGGGTGGCCAAGTGGAGGGGAGTAGACATC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| CDS-3UTR CCA 90 bp | TCATGGCAGATTAGAGGGTGCTGCTGGCCTGGAGACAGGTCTCCAGATCTGACTTGGCGTGCTACAGGCTaGCCACCCCAATGTCTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: SWQIRGCCWPGDRSPDLTWRATG*PPQCLR Trigger: GCGCAGACATTGGGGTGGCCAGCCTGTAGCACGCCA...AGTCAGATCTGGAGACCTGTCTCCAGGCCAGCAGCACCCTCTAATCTGCCATGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| CDS-3UTR CCA 90 bp | CCCTGGCTTTATACTTCCCTCAACCCAAGCCCCGGGAGTCAGGGCCACCTCCTGACAGCCTCTTGGCCATaGGTGTGCATTGCACTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: PWLYTSLNPSPGSQGHLLTASWP*VCIALS Trigger: ACTCAGTGCAATGCACACCCATGGCCAAGAGGCTGT...CAGGAGGTGGCCCTGACTCCCGGGGCTTGGGTTGAGGGAAGTATAAAGCCAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| CDS-3UTR CCA 90 bp | GATGTCTACTCCCCTCCACTTGGCCACCCAGGGCTAAGGTACTGGGGGCCAAGTTGTCCCACAGCCTCTTaGCCATGGGTGTGCATTGCA | + |
|
Preference number: 4 (lower is better) Translates to: DVYSPPLGHPGLRYWGPSCPTAS*PWVCIA Trigger: TGCAATGCACACCCATGGCCAAGAGGCTGTGGGACA...ACTTGGCCCCCAGTACCTTAGCCCTGGGTGGCCAAGTGGAGGGGAGTAGACATC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| CDS-3UTR CCA 90 bp | CCTCCTGAGGTGCTTGGAACCAATGGGCTCTGCTGCCCACTCTACAAGCCCTCTGTTAAGGGCCAGGTCTaGCGTGGAGAACTTGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: PPEVLGTNGLCCPLYKPSVKGQV*RGELGH Trigger: ATGGCCAAGTTCTCCACGCCAGACCTGGCCCTTAAC...AGAGGGCTTGTAGAGTGGGCAGCAGAGCCCATTGGTTCCAAGCACCTCAGGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| CDS-3UTR GCA 90 bp | AGCCCCGGGAGTCAGGGCCACCTCCTGAGGTGCTTGGAACCAATGGGCTCTGCTACTCAAGGATGCTGTTaGCGAAGTTTGGAATCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SPGSQGHLLRCLEPMGSATQGCC*RSLESP Trigger: TGGAGATTCCAAACTTCGGCAACAGCATCCTTGAGT...AGCAGAGCCCATTGGTTCCAAGCACCTCAGGAGGTGGCCCTGACTCCCGGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| CDS-3UTR CCA 90 bp | CCCTGTGCTCACATGTCAAACTCAAGACACCCAAAAGACTGCTCCTGGAGAGCTGCCAGCACAGCACGGTaGGCTTTGAAGGCATGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PCAHMSNSRHPKDCSWRAASTAR*ALKAWP Trigger: GGGCCATGCCTTCAAAGCCCACCGTGCTGTGCTGGC...AGCTCTCCAGGAGCAGTCTTTTGGGTGTCTTGAGTTTGACATGTGAGCACAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| CDS-3UTR GCA 90 bp | TCTCTTGACCCAGCCCAGCTTGCTTTGGGGAAAAGGTGTGGGATGACAGGGAGGGGTACTGCTCATCTGTaGCCTCCTCACCTGCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLDPAQLALGKRCGMTGRGTAHL*PPHLHL Trigger: AAGATGCAGGTGAGGAGGGCACAGATGAGCAGTACC...CCTCCCTGTCATCCCACACCTTTTCCCCAAAGCAAGCTGGGCTGGGTCAAGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| CDS-3UTR CCA 90 bp | GGGCCACCTCCTGAGGTGCTTGGAACCAATGGGCTCTGCTGCCCACTCTACAAGGTTGATAAGTTCAGCTaGGAGAGATGCCAGGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GPPPEVLGTNGLCCPLYKVDKFS*ERCQVL Trigger: CAAGACCTGGCATCTCTCCCAGCTGAACTTATCAAC...CTTGTAGAGTGGGCAGCAGAGCCCATTGGTTCCAAGCACCTCAGGAGGTGGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| CDS-3UTR GCA 90 bp | CCCACAGTCCACACACACACACATTCAGTCTTCCCTGCATCCTGCCTTCCACAGGCCATGGGTGTGCATTaGACTGAGTCCAACTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PTVHTHTHSVFPASCLPQAMGVH*TESNSC Trigger: ACAGGAGTTGGACTCAGTGCAATGCACACCCATGGC...CTGTGGAAGGCAGGATGCAGGGAAGACTGAATGTGTGTGTGTGTGGACTGTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| CDS-3UTR GCA 90 bp | AGAAACCCTGTGCTCACATGTCAAACTCAAGACACCCAAAAGACTGCTCCTGGATGCGGCTGCCGTTGTTaGCACCACTGCCTCCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: RNPVLTCQTQDTQKTAPGCGCRC*HHCLQP Trigger: AGGCTGGAGGCAGTGGTGGCAACAACGGCAGCCGCA...TCCAGGAGCAGTCTTTTGGGTGTCTTGAGTTTGACATGTGAGCACAGGGTTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| CDS-3UTR CCA 90 bp | TGGAACCAATGGGCTCTGCTGCCCACTCTACAAGCCCTCTCCGCCCCACAGAACCAACGATTGCCAATCTaGTTGATAAGTTCAGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: WNQWALLPTLQALSAPQNQRLPI*LISSAG Trigger: CCCAGCTGAACTTATCAACCAGATTGGCAATCGTTG...GTTCTGTGGGGCGGAGAGGGCTTGTAGAGTGGGCAGCAGAGCCCATTGGTTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| CDS-3UTR GCA 90 bp | AGAAACCCTGTGCTCACATGTCAAACTCAAGACACCCAAAAGACTGCTCCTGGAAGAACTTGGCCATCTTaGGGCTGCCGTTGTTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RNPVLTCQTQDTQKTAPGRTWPS*GCRCCH Trigger: GTGGCAACAACGGCAGCCGCAAGATGGCCAAGTTCT...TCCAGGAGCAGTCTTTTGGGTGTCTTGAGTTTGACATGTGAGCACAGGGTTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| CDS-3UTR GCA 90 bp | CCCTGTGCTCACATGTCAAACTCAAGACACCCAAAAGACTGCTCCTGGAGAGCTGGTGCACATGTCAGCTaGAATGGCATTCATCTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: PCAHMSNSRHPKDCSWRAGAHVS*NGIHLA Trigger: AGCGAGATGAATGCCATTGCAGCTGACATGTGCACC...AGCTCTCCAGGAGCAGTCTTTTGGGTGTCTTGAGTTTGACATGTGAGCACAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| 3UTR CAA 72 bp | CCTGCTCCCTGGTTCCGACCCTGGTCTTGCTGCCTCTaGATCTTCATGTTTTTAAAAGCAAACACTCTACGC | + |
|
Preference number: 4 (lower is better) Translates to: PAPWFRPWSCCL*IFMFLKANTLR Trigger: GCGTAGAGTGTTTGCTTTTAAAAACATGAAGATCAAGAGGCAGCAAGACCAGGGTCGGAACCAGGGAGCAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| CDS-3UTR GCA 90 bp | GATCTTCATGTTTTTAAAAGCAAACACTCTACGCAGGCACGCACGCACACACGCCAAAATGTGAGGATCTaGTGGAATGACTGTGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: DLHVFKSKHSTQARTHTRQNVRI*WNDCGC Trigger: GCAGCCACAGTCATTCCAGCAGATCCTCACATTTTG...GCGTGTGTGCGTGCGTGCCTGCGTAGAGTGTTTGCTTTTAAAAACATGAAGATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| CDS-3UTR GCA 90 bp | AGTTTCTCTAAGCCTTTTGGGCTTGTTTCCTCAGTTTGTAAAGTAGACAGTCCCAAGAACGGATGCCGGTaGCACAGCTATTGGCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SFSKPFGLVSSVCKVDSPKNGCR*HSYWPV Trigger: CACTGGCCAATAGCTGTGGCACCGGCATCCGTTCTT...GGGACTGTCTACTTTACAAACTGAGGAAACAAGCCCAAAAGGCTTAGAGAAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| CDS-3UTR CCA 90 bp | AGAAACCCTGTGCTCACATGTCAAACTCAAGACACCCAAAAGACTGCTCCTGGACTGGGAGTCGCAACTTaGAGAGCTAACTTTGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RNPVLTCQTQDTQKTAPGLGVAT*RANFEE Trigger: TTCCTCAAAGTTAGCTCTCCAAGTTGCGACTCCCAG...TCCAGGAGCAGTCTTTTGGGTGTCTTGAGTTTGACATGTGAGCACAGGGTTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| CDS-3UTR CCA 90 bp | GTGAAAGCTGTATTCTATGCCTATCAAGTTCTGCTCTTCCTCATGGTCACTGAGAATGTGAGGATCTGCTaGAATGACTGTGGCTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: VKAVFYAYQVLLFLMVTENVRIC*NDCGCT Trigger: TGTGCAGCCACAGTCATTCCAGCAGATCCTCACATT...CTCAGTGACCATGAGGAAGAGCAGAACTTGATAGGCATAGAATACAGCTTTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| CDS-3UTR CCA 90 bp | GTGAAAGCTGTATTCTATGCCTATCAAGTTCTGCTCTTCCTCATGGTCACTGAGACCTTCTCAGCTGTCTaGCCAACGTTCAACATACTG | + |
|
Preference number: 4 (lower is better) Translates to: VKAVFYAYQVLLFLMVTETFSAV*PTFNIL Trigger: CAGTATGTTGAACGTTGGCCAGACAGCTGAGAAGGT...CTCAGTGACCATGAGGAAGAGCAGAACTTGATAGGCATAGAATACAGCTTTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| CDS-3UTR CCA 90 bp | AGTTTCTCTAAGCCTTTTGGGCTTGTTTCCTCAGTTTGTAAAGTAGACAGTCCCTTCATCGTAGAGCTTTaGGTGGCAACGATTGCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: SFSKPFGLVSSVCKVDSPFIVEL*VATIAN Trigger: ATTGGCAATCGTTGCCACCCAAAGCTCTACGATGAA...GGGACTGTCTACTTTACAAACTGAGGAAACAAGCCCAAAAGGCTTAGAGAAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| CDS TCA 90 bp | GGCGTGCTACAGGCTGGCCACCCCAATGTCTGCGCTACAGGACTCTaGGGCTCTGAGGATGGGGCCTCCTCCGGGTGCAGGCCCTGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: GVLQAGHPNVCATGL*GSEDGASSGCRPWE Trigger: CTCCCAGGGCCTGCACCCGGAGGAGGCCCCATCCTCAGAGCCTCAGAGTCCTGTAGCGCAGACATTGGGGTGGCCAGCCTGTAGCACGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001975.6 ENSMUST00000238301.2 ENSMUST00000238434.2 ENSMUST00000238449.2 |
||
| CDS-3UTR CAA 90 bp | GGAGGGGTCCAGAAGACCCCTGGGCCCGTGGAGTCCCAAGCAGCCACAGTGAGGCTGTCCCACAGCCTCTaGGCCATGGGTGTGCATTGC | + |
|
Preference number: 5 (lower is better) Translates to: GGVQKTPGPVESQAATVRLSHSL*AMGVHC Trigger: GCAATGCACACCCATGGCCAAGAGGCTGTGGGACAG...CCTCACTGTGGCTGCTTGGGACTCCACGGGCCCAGGGGTCTTCTGGACCCCTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| CDS-3UTR CAA 90 bp | CCCTGGCTTTATACTTCCCTCAACCCAAGCCCCGGGAGTCAGGGCCACCTCCTGTTGCGGCTGCCGTTGTaGCCACCACTGCCTCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PWLYTSLNPSPGSQGHLLLRLPL*PPLPPA Trigger: GGCTGGAGGCAGTGGTGGCAACAACGGCAGCCGCAA...CAGGAGGTGGCCCTGACTCCCGGGGCTTGGGTTGAGGGAAGTATAAAGCCAGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| CDS GCA 90 bp | GCGTGGAGAACTTGGCCATCTTGCGGCTGCCGTTGTTGCCACCACTaGCTCCAGCCTCCTTCTGGCTGCTGTCCCACAGCCTCTTGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: AWRTWPSCGCRCCHH*LQPPSGCCPTASWP Trigger: TGGCCAAGAGGCTGTGGGACAGCAGCCAGAAGGAGGCTGGAGGCAGTGGTGGCAACAACGGCAGCCGCAAGATGGCCAAGTTCTCCACGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001975.6 ENSMUST00000238301.2 ENSMUST00000238434.2 |
||
| CDS-3UTR CAA 90 bp | CTGGGGCACTGGGACTGGGCCCCTGTGGAAACATGCACCCACAGTCCACACACAACAGCACGGTGGGCTTaGAAGGCATGGCCCTTCACC | + |
|
Preference number: 5 (lower is better) Translates to: LGHWDWAPVETCTHSPHTTARWA*KAWPFT Trigger: GGTGAAGGGCCATGCCTTCAAAGCCCACCGTGCTGT...TGTGTGTGGACTGTGGGTGCATGTTTCCACAGGGGCCCAGTCCCAGTGCCCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| CDS-3UTR CAA 90 bp | GGGCCACCTCCTGAGGTGCTTGGAACCAATGGGCTCTGCTGCCCACTCTACAAGTCTGGCGTGGAGAACTaGGCCATCTTGCGGCTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: GPPPEVLGTNGLCCPLYKSGVEN*AILRLP Trigger: CGGCAGCCGCAAGATGGCCAAGTTCTCCACGCCAGA...CTTGTAGAGTGGGCAGCAGAGCCCATTGGTTCCAAGCACCTCAGGAGGTGGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| CDS CCA 90 bp | AGGAGCTGGGGCTGTCACTGGTGTAAGCACTGGAGGTACCTGGACTaGTCCGCTCTGACATGCTGGGCCCACTCACACATCCCCCTACTG | + |
|
Preference number: 5 (lower is better) Translates to: RSWGCHWCKHWRYLD*SALTCWAHSHIPLL Trigger: CAGTAGGGGGATGTGTGAGTGGGCCCAGCATGTCAGAGCGGACCAGTCCAGGTACCTCCAGTGCTTACACCAGTGACAGCCCCAGCTCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001975.6 ENSMUST00000238434.2 |
||
| CDS TCA 90 bp | TGGCCATGGGTGTGCATTGCACTGAGTCCAACTCCTGTTCTGTCTTaGCCCGTGACACAAGGGGCAGTGGCGTGCTACAGGCTGGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: WPWVCIALSPTPVLS*PVTQGAVACYRLAT Trigger: GGTGGCCAGCCTGTAGCACGCCACTGCCCCTTGTGTCACGGGTCAAGACAGAACAGGAGTTGGACTCAGTGCAATGCACACCCATGGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001975.6 ENSMUST00000238301.2 ENSMUST00000238434.2 ENSMUST00000238449.2 |
||
| CDS TCA 90 bp | GCTGTCACTGGTGTAAGCACTGGAGGTACCTGGACTGGTCCGCTCTaGCATGCTGGGCCCACTCACACATCCCCCTACTGCAACCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: AVTGVSTGGTWTGPL*HAGPTHTSPYCNHS Trigger: GCTGTGGTTGCAGTAGGGGGATGTGTGAGTGGGCCCAGCATGTCAGAGCGGACCAGTCCAGGTACCTCCAGTGCTTACACCAGTGACAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001975.6 ENSMUST00000238434.2 |
||
| CDS GCA 90 bp | CACTGGTGTAAGCACTGGAGGTACCTGGACTGGTCCGCTCTGACATaGTGGGCCCACTCACACATCCCCCTACTGCAACCACAGCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: HWCKHWRYLDWSALT*WAHSHIPLLQPQPL Trigger: CAGTGGCTGTGGTTGCAGTAGGGGGATGTGTGAGTGGGCCCAGCATGTCAGAGCGGACCAGTCCAGGTACCTCCAGTGCTTACACCAGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001975.6 ENSMUST00000238434.2 |
||
| CDS GCA 90 bp | AGGTCTTGCCGCACTCGAATGCGACTGCGGGACTCAAGGACCACCTaGTCAGGAAGGGCCTCTACCTTCTCAGCTGTCTGGCCAACGTTC | + |
|
Preference number: 5 (lower is better) Translates to: RSCRTRMRLRDSRTT*SGRASTFSAVWPTF Trigger: GAACGTTGGCCAGACAGCTGAGAAGGTAGAGGCCCTTCCTGAGCAGGTGGTCCTTGAGTCCCGCAGTCGCATTCGAGTGCGGCAAGACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| CDS CCA 90 bp | TGGTGTAAGCACTGGAGGTACCTGGACTGGTCCGCTCTGACATGCTaGGCCCACTCACACATCCCCCTACTGCAACCACAGCCACTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: WCKHWRYLDWSALTC*AHSHIPLLQPQPLL Trigger: CAGCAGTGGCTGTGGTTGCAGTAGGGGGATGTGTGAGTGGGCCCAGCATGTCAGAGCGGACCAGTCCAGGTACCTCCAGTGCTTACACCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001975.6 ENSMUST00000238434.2 |
||
| CDS-3UTR CAA 90 bp | AGCAGCCACAGTGAGGGGCAGGCTCTTGTTGAGTCCTGCCCGTCCCCTAGCCGGCGATTGCCAATCTGGTaGATAAGTTCAGCTGGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: SSHSEGQALVESCPSPSRRLPIW*ISSAGR Trigger: TCTCCCAGCTGAACTTATCAACCAGATTGGCAATCG...CCGGCTAGGGGACGGGCAGGACTCAACAAGAGCCTGCCCCTCACTGTGGCTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| CDS GCA 90 bp | AGGTCTTGCCGCACTCGAATGCGACTGCGGGACTCAAGGACCACCTaGTCAGGAAGGGCCTCTACCTTCTCAGCTGCATCTTCTTCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: RSCRTRMRLRDSRTT*SGRASTFSAASSSS Trigger: CGAAGAAGAAGATGCAGCTGAGAAGGTAGAGGCCCTTCCTGAGCAGGTGGTCCTTGAGTCCCGCAGTCGCATTCGAGTGCGGCAAGACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238434.2 |
||
| CDS GCA 90 bp | TCCTTCTGGCTGCTGTCCCACAGCCTCTTGGCCATGGGTGTGCATTaGACTGAGTCCAACTCCTGTTCTGTCTTGACCCGTGACACAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SFWLLSHSLLAMGVH*TESNSCSVLTRDTR Trigger: CCTTGTGTCACGGGTCAAGACAGAACAGGAGTTGGACTCAGTGCAATGCACACCCATGGCCAAGAGGCTGTGGGACAGCAGCCAGAAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001975.6 ENSMUST00000238301.2 ENSMUST00000238434.2 |
||
| CDS CCA 90 bp | CATGGAGGACACGACTGTCCAGTGGCTTTCGTCTGGGGTCATTGGTaGAAGAACGGATGCCGGTGCCACAGCTATTGGCCAGTGTATTCC | + |
|
Preference number: 5 (lower is better) Translates to: HGGHDCPVAFVWGHW*KNGCRCHSYWPVYS Trigger: GGAATACACTGGCCAATAGCTGTGGCACCGGCATCCGTTCTTCCACCAATGACCCCAGACGAAAGCCACTGGACAGTCGTGTCCTCCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001975.6 ENSMUST00000238434.2 |
||
| CDS CCA 90 bp | CAGCATGGAGGACACGACTGTCCAGTGGCTTTCGTCTGGGGTCATTaGTGGAAGAACGGATGCCGGTGCCACAGCTATTGGCCAGTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: QHGGHDCPVAFVWGH*WKNGCRCHSYWPVY Trigger: ATACACTGGCCAATAGCTGTGGCACCGGCATCCGTTCTTCCACCAATGACCCCAGACGAAAGCCACTGGACAGTCGTGTCCTCCATGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001975.6 ENSMUST00000238434.2 |
||
| CDS CCA 90 bp | GTTCTGGCAGTAGTACTTGACAGCATGGAGGACACGACTGTCCAGTaGCTTTCGTCTGGGGTCATTGGTGGAAGAACGGATGCCGGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: VLAVVLDSMEDTTVQ*LSSGVIGGRTDAGA Trigger: GGCACCGGCATCCGTTCTTCCACCAATGACCCCAGACGAAAGCCACTGGACAGTCGTGTCCTCCATGCTGTCAAGTACTACTGCCAGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001975.6 ENSMUST00000238434.2 |
||
| CDS-3UTR CAA 90 bp | CACAGAACTGCCCCCTTACTAAACCTGGGCAGGGAGCACAGCCTGCGCTCATCCCTTGTGATGTATACATaGGTGCCTGTCACGAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: HRTAPLLNLGREHSLRSSLVMYT*VPVTSS Trigger: GGAGCTCGTGACAGGCACCAATGTATACATCACAAG...GGATGAGCGCAGGCTGTGCTCCCTGCCCAGGTTTAGTAAGGGGGCAGTTCTGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| CDS GCA 90 bp | TTGCCAATCTGGTTGATAAGTTCAGCTGGGAGAGATGCCAGGTCTTaGCGCACTCGAATGCGACTGCGGGACTCAAGGACCACCTGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LPIWLISSAGRDARS*RTRMRLRDSRTTCS Trigger: TGAGCAGGTGGTCCTTGAGTCCCGCAGTCGCATTCGAGTGCGGCAAGACCTGGCATCTCTCCCAGCTGAACTTATCAACCAGATTGGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001975.6 ENSMUST00000238434.2 |
||
| CDS GCA 90 bp | GTGGCAACGATTGCCAATCTGGTTGATAAGTTCAGCTGGGAGAGATaGCAGGTCTTGCCGCACTCGAATGCGACTGCGGGACTCAAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: VATIANLVDKFSWER*QVLPHSNATAGLKD Trigger: GTCCTTGAGTCCCGCAGTCGCATTCGAGTGCGGCAAGACCTGGCATCTCTCCCAGCTGAACTTATCAACCAGATTGGCAATCGTTGCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001975.6 ENSMUST00000238434.2 |
||
| CDS GCA 90 bp | CCAGTGGCTTTCGTCTGGGGTCATTGGTGGAAGAACGGATGCCGGTaGCACAGCTATTGGCCAGTGTATTCCGGTCAAAGAAGGAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PVAFVWGHWWKNGCR*HSYWPVYSGQRRKP Trigger: TGGCTTCCTTCTTTGACCGGAATACACTGGCCAATAGCTGTGGCACCGGCATCCGTTCTTCCACCAATGACCCCAGACGAAAGCCACTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001975.6 ENSMUST00000238434.2 |
||
| CDS CCA 90 bp | GAGCTTTGGGTGGCAACGATTGCCAATCTGGTTGATAAGTTCAGCTaGGAGAGATGCCAGGTCTTGCCGCACTCGAATGCGACTGCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: ELWVATIANLVDKFS*ERCQVLPHSNATAG Trigger: TCCCGCAGTCGCATTCGAGTGCGGCAAGACCTGGCATCTCTCCCAGCTGAACTTATCAACCAGATTGGCAATCGTTGCCACCCAAAGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001975.6 ENSMUST00000238434.2 |
||
| CDS-3UTR CAA 90 bp | GTCCCCATGAGAGGCATGGATGGGTGGGAGGGTAGCCACTGGGTTTGCCCCTACTTTGGGTGGCAACGATaGCCAATCTGGTTGATAAGT | + |
|
Preference number: 5 (lower is better) Translates to: VPMRGMDGWEGSHWVCPYFGWQR*PIWLIS Trigger: ACTTATCAACCAGATTGGCAATCGTTGCCACCCAAA...GTAGGGGCAAACCCAGTGGCTACCCTCCCACCCATCCATGCCTCTCATGGGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| CDS-3UTR CAA 90 bp | TCATGGCAGATTAGAGGGTGCTGCTGGCCTGGAGACAGGTCTCCAGATCTGACTCTTCATCGTAGAGCTTaGGGTGGCAACGATTGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: SWQIRGCCWPGDRSPDLTLHRRA*GGNDCQ Trigger: TTGGCAATCGTTGCCACCCAAAGCTCTACGATGAAG...AGTCAGATCTGGAGACCTGTCTCCAGGCCAGCAGCACCCTCTAATCTGCCATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| CDS-3UTR CAA 90 bp | AGTTTCTCTAAGCCTTTTGGGCTTGTTTCCTCAGTTTGTAAAGTAGACAGTCCCCGCCGCAGCAAGACCTaGTGCCGCGTGCCTGCACTG | + |
|
Preference number: 5 (lower is better) Translates to: SFSKPFGLVSSVCKVDSPRRSKT*CRVPAL Trigger: CAGTGCAGGCACGCGGCACAAGGTCTTGCTGCGGCG...GGGACTGTCTACTTTACAAACTGAGGAAACAAGCCCAAAAGGCTTAGAGAAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| CDS GCA 90 bp | CATATTGCAGATCTGACGGTACTGCTCATCTGTGCCCTCCTCACCTaGATCTTCTTCTTCGTCCTCTTCATTGTGGTAGGAGCTGGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: HIADLTVLLICALLT*IFFFVLFIVVGAGA Trigger: AGCCCCAGCTCCTACCACAATGAAGAGGACGAAGAAGAAGATGCAGGTGAGGAGGGCACAGATGAGCAGTACCGTCAGATCTGCAATATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| CDS-3UTR CAA 90 bp | GATCTTCATGTTTTTAAAAGCAAACACTCTACGCAGGCACGCACGCACACACGCGAGAACTTGGCCATCTaGCGGCTGCCGTTGTTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: DLHVFKSKHSTQARTHTRENLAI*RLPLLP Trigger: TGGCAACAACGGCAGCCGCAAGATGGCCAAGTTCTC...GCGTGTGTGCGTGCGTGCCTGCGTAGAGTGTTTGCTTTTAAAAACATGAAGATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| CDS-3UTR CAA 90 bp | CCCTGTGCTCACATGTCAAACTCAAGACACCCAAAAGACTGCTCCTGGAGAGCTCTTGGAGAGCTAACTTaGAGGAAGAACTCAGTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: PCAHMSNSRHPKDCSWRALGELT*RKNSVP Trigger: AGGCACTGAGTTCTTCCTCAAAGTTAGCTCTCCAAG...AGCTCTCCAGGAGCAGTCTTTTGGGTGTCTTGAGTTTGACATGTGAGCACAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| CDS GCA 90 bp | CAGCTGTCTGGCCAACGTTCAACATACTGTACATTGTATACATATTaGAGATCTGACGGTACTGCTCATCTGTGCCCTCCTCACCTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: QLSGQRSTYCTLYTY*RSDGTAHLCPPHLH Trigger: ATGCAGGTGAGGAGGGCACAGATGAGCAGTACCGTCAGATCTGCAATATGTATACAATGTACAGTATGTTGAACGTTGGCCAGACAGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| CDS CCA 90 bp | TCAAGGACCACCTGCTCAGGAAGGGCCTCTACCTTCTCAGCTGTCTaGCCAACGTTCAACATACTGTACATTGTATACATATTGCAGATC | + |
|
Preference number: 5 (lower is better) Translates to: SRTTCSGRASTFSAV*PTFNILYIVYILQI Trigger: GATCTGCAATATGTATACAATGTACAGTATGTTGAACGTTGGCCAGACAGCTGAGAAGGTAGAGGCCCTTCCTGAGCAGGTGGTCCTTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| CDS TCA 90 bp | TGGCCAACGTTCAACATACTGTACATTGTATACATATTGCAGATCTaGCGGTACTGCTCATCTGTGCCCTCCTCACCTGCATCTTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: WPTFNILYIVYILQI*RYCSSVPSSPASSS Trigger: AGAAGAAGATGCAGGTGAGGAGGGCACAGATGAGCAGTACCGTCAGATCTGCAATATGTATACAATGTACAGTATGTTGAACGTTGGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| CDS TCA 72 bp | GCCACTGCTGCTGTAGCTGTGGCCATTGAGAGTGGCTaGGGCATCCGGTTAAGGGCCAGGTCTGGCGTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: ATAAVAVAIESG*GIRLRARSGVE Trigger: CTCCACGCCAGACCTGGCCCTTAACCGGATGCCTCAGCCACTCTCAATGGCCACAGCTACAGCAGCAGTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001975.6 ENSMUST00000238434.2 |
||
| CDS GCA 72 bp | CCAGGTCTGGCGTGGAGAACTTGGCCATCTTGCGGCTaGCGTTGTTGCCACCACTGCCTCCAGCCTCCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: PGLAWRTWPSCG*RCCHHCLQPPS Trigger: AGAAGGAGGCTGGAGGCAGTGGTGGCAACAACGGCAGCCGCAAGATGGCCAAGTTCTCCACGCCAGACCTGG 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001975.6 ENSMUST00000238301.2 ENSMUST00000238434.2 |
||
| CDS CCA 72 bp | GGCTCTGAGGATGGGGCCTCCTCCGGGTGCAGGCCCTaGGAGTCGCAACTTGGAGAGCTAACTTTGAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: GSEDGASSGCRP*ESQLGELTLRK Trigger: CTTCCTCAAAGTTAGCTCTCCAAGTTGCGACTCCCAGGGCCTGCACCCGGAGGAGGCCCCATCCTCAGAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001975.6 ENSMUST00000238301.2 ENSMUST00000238434.2 ENSMUST00000238449.2 |
||
| CDS CAA 72 bp | TTAAGGGCCAGGTCTGGCGTGGAGAACTTGGCCATCTaGCGGCTGCCGTTGTTGCCACCACTGCCTCCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: LRARSGVENLAI*RLPLLPPLPPA Trigger: GGCTGGAGGCAGTGGTGGCAACAACGGCAGCCGCAAGATGGCCAAGTTCTCCACGCCAGACCTGGCCCTTAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001975.6 ENSMUST00000238301.2 ENSMUST00000238434.2 |
||
| CDS CAA 72 bp | GGCATCCGGTTAAGGGCCAGGTCTGGCGTGGAGAACTaGGCCATCTTGCGGCTGCCGTTGTTGCCACCACTG | + |
|
Preference number: 6 (lower is better) Translates to: GIRLRARSGVEN*AILRLPLLPPL Trigger: CAGTGGTGGCAACAACGGCAGCCGCAAGATGGCCAAGTTCTCCACGCCAGACCTGGCCCTTAACCGGATGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001975.6 ENSMUST00000238301.2 ENSMUST00000238434.2 |
||
| CDS GCA 72 bp | CGCACTCGAATGCGACTGCGGGACTCAAGGACCACCTaGTCAGGAAGGGCCTCTACCTTCTCAGCTGTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: RTRMRLRDSRTT*SGRASTFSAVW Trigger: CCAGACAGCTGAGAAGGTAGAGGCCCTTCCTGAGCAGGTGGTCCTTGAGTCCCGCAGTCGCATTCGAGTGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| CDS GCA 72 bp | CAGCTGGGAGAGATGCCAGGTCTTGCCGCACTCGAATaGGACTGCGGGACTCAAGGACCACCTGCTCAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: QLGEMPGLAALE*DCGTQGPPAQE Trigger: TTCCTGAGCAGGTGGTCCTTGAGTCCCGCAGTCGCATTCGAGTGCGGCAAGACCTGGCATCTCTCCCAGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001975.6 ENSMUST00000238434.2 |
||
| CDS TCA 72 bp | TGCAACCACAGCCACTGCTGCTGTAGCTGTGGCCATTaGGAGTGGCTGAGGCATCCGGTTAAGGGCCAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: CNHSHCCCSCGH*EWLRHPVKGQV Trigger: GACCTGGCCCTTAACCGGATGCCTCAGCCACTCTCAATGGCCACAGCTACAGCAGCAGTGGCTGTGGTTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001975.6 ENSMUST00000238434.2 |
||
| CDS GCA 72 bp | AAGCACTGGAGGTACCTGGACTGGTCCGCTCTGACATaGTGGGCCCACTCACACATCCCCCTACTGCAACCA | + |
|
Preference number: 6 (lower is better) Translates to: KHWRYLDWSALT*WAHSHIPLLQP Trigger: TGGTTGCAGTAGGGGGATGTGTGAGTGGGCCCAGCATGTCAGAGCGGACCAGTCCAGGTACCTCCAGTGCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001975.6 ENSMUST00000238434.2 |
||
| CDS GCA 72 bp | CGCACTCGAATGCGACTGCGGGACTCAAGGACCACCTaGTCAGGAAGGGCCTCTACCTTCTCAGCTGCATCT | + |
|
Preference number: 6 (lower is better) Translates to: RTRMRLRDSRTT*SGRASTFSAAS Trigger: AGATGCAGCTGAGAAGGTAGAGGCCCTTCCTGAGCAGGTGGTCCTTGAGTCCCGCAGTCGCATTCGAGTGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238434.2 |
||
| CDS CCA 72 bp | GGCTGTCACTGGTGTAAGCACTGGAGGTACCTGGACTaGTCCGCTCTGACATGCTGGGCCCACTCACACATC | + |
|
Preference number: 6 (lower is better) Translates to: GCHWCKHWRYLD*SALTCWAHSHI Trigger: GATGTGTGAGTGGGCCCAGCATGTCAGAGCGGACCAGTCCAGGTACCTCCAGTGCTTACACCAGTGACAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001975.6 ENSMUST00000238434.2 |
||
| CDS CCA 72 bp | CAGCATGGAGGACACGACTGTCCAGTGGCTTTCGTCTaGGGTCATTGGTGGAAGAACGGATGCCGGTGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: QHGGHDCPVAFV*GHWWKNGCRCH Trigger: GTGGCACCGGCATCCGTTCTTCCACCAATGACCCCAGACGAAAGCCACTGGACAGTCGTGTCCTCCATGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001975.6 ENSMUST00000238434.2 |
||
| CDS CAA 90 bp | TTGGCCATGGGTGTGCATTGCACTGAGTCCAACTCCTGTTCTGTCTaGACCCGTGACACAAGGGGCAGTGGCGTGCTACAGGCTGGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: LAMGVHCTESNSCSV*TRDTRGSGVLQAGH Trigger: GTGGCCAGCCTGTAGCACGCCACTGCCCCTTGTGTCACGGGTCAAGACAGAACAGGAGTTGGACTCAGTGCAATGCACACCCATGGCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001975.6 ENSMUST00000238301.2 ENSMUST00000238434.2 ENSMUST00000238449.2 |
||
| CDS CCA 72 bp | GGCCTCCTCCGGGTGCAGGCCCTGGGAGTCGCAACTTaGAGAGCTAACTTTGAGGAAGAACTCAGTGCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: GLLRVQALGVAT*RANFEEELSAF Trigger: AAAGGCACTGAGTTCTTCCTCAAAGTTAGCTCTCCAAGTTGCGACTCCCAGGGCCTGCACCCGGAGGAGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001975.6 ENSMUST00000238301.2 ENSMUST00000238434.2 ENSMUST00000238449.2 |
||
| CDS CCA 72 bp | CACGACTGTCCAGTGGCTTTCGTCTGGGGTCATTGGTaGAAGAACGGATGCCGGTGCCACAGCTATTGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: HDCPVAFVWGHW*KNGCRCHSYWP Trigger: TGGCCAATAGCTGTGGCACCGGCATCCGTTCTTCCACCAATGACCCCAGACGAAAGCCACTGGACAGTCGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001975.6 ENSMUST00000238434.2 |
||
| CDS CAA 90 bp | ACAGCATGGAGGACACGACTGTCCAGTGGCTTTCGTCTGGGGTCATaGGTGGAAGAACGGATGCCGGTGCCACAGCTATTGGCCAGTGTA | + |
|
Preference number: 6 (lower is better) Translates to: TAWRTRLSSGFRLGS*VEERMPVPQLLASV Trigger: TACACTGGCCAATAGCTGTGGCACCGGCATCCGTTCTTCCACCAATGACCCCAGACGAAAGCCACTGGACAGTCGTGTCCTCCATGCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001975.6 ENSMUST00000238434.2 |
||
| CDS TCA 72 bp | CCGGCCTGTGTAACAAAATGTGAGGATCTGCTGGAATaGCTGTGGCTGCACAGCGGCCGGCAGTTCTACCAC | + |
|
Preference number: 6 (lower is better) Translates to: PACVTKCEDLLE*LWLHSGRQFYH Trigger: GTGGTAGAACTGCCGGCCGCTGTGCAGCCACAGTCATTCCAGCAGATCCTCACATTTTGTTACACAGGCCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001975.6 ENSMUST00000238301.2 ENSMUST00000238449.2 |
||
| CDS TCA 72 bp | GTGTGCATTGCACTGAGTCCAACTCCTGTTCTGTCTTaGCCCGTGACACAAGGGGCAGTGGCGTGCTACAGG | + |
|
Preference number: 6 (lower is better) Translates to: VCIALSPTPVLS*PVTQGAVACYR Trigger: CCTGTAGCACGCCACTGCCCCTTGTGTCACGGGTCAAGACAGAACAGGAGTTGGACTCAGTGCAATGCACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001975.6 ENSMUST00000238301.2 ENSMUST00000238434.2 ENSMUST00000238449.2 |
||
| CDS GCA 72 bp | TGGTTGATAAGTTCAGCTGGGAGAGATGCCAGGTCTTaGCGCACTCGAATGCGACTGCGGGACTCAAGGACC | + |
|
Preference number: 6 (lower is better) Translates to: WLISSAGRDARS*RTRMRLRDSRT Trigger: GGTCCTTGAGTCCCGCAGTCGCATTCGAGTGCGGCAAGACCTGGCATCTCTCCCAGCTGAACTTATCAACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001975.6 ENSMUST00000238434.2 |
||
| CDS CAA 72 bp | CTGGTTGATAAGTTCAGCTGGGAGAGATGCCAGGTCTaGCCGCACTCGAATGCGACTGCGGGACTCAAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: LVDKFSWERCQV*PHSNATAGLKD Trigger: GTCCTTGAGTCCCGCAGTCGCATTCGAGTGCGGCAAGACCTGGCATCTCTCCCAGCTGAACTTATCAACCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001975.6 ENSMUST00000238434.2 |
||
| CDS CAA 72 bp | AGGACACGACTGTCCAGTGGCTTTCGTCTGGGGTCATaGGTGGAAGAACGGATGCCGGTGCCACAGCTATTG | + |
|
Preference number: 6 (lower is better) Translates to: RTRLSSGFRLGS*VEERMPVPQLL Trigger: CAATAGCTGTGGCACCGGCATCCGTTCTTCCACCAATGACCCCAGACGAAAGCCACTGGACAGTCGTGTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001975.6 ENSMUST00000238434.2 |
||
| CDS CAA 90 bp | TCCTCCGGGTGCAGGCCCTGGGAGTCGCAACTTGGAGAGCTAACTTaGAGGAAGAACTCAGTGCCTTTCTCCATGATCTCCTGGATCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SSGCRPWESQLGELT*RKNSVPFSMISWIC Trigger: GCAGATCCAGGAGATCATGGAGAAAGGCACTGAGTTCTTCCTCAAAGTTAGCTCTCCAAGTTGCGACTCCCAGGGCCTGCACCCGGAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001975.6 ENSMUST00000238301.2 ENSMUST00000238434.2 ENSMUST00000238449.2 |
||
| CDS CAA 90 bp | ATTGCCAATCTGGTTGATAAGTTCAGCTGGGAGAGATGCCAGGTCTaGCCGCACTCGAATGCGACTGCGGGACTCAAGGACCACCTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: IANLVDKFSWERCQV*PHSNATAGLKDHLL Trigger: GAGCAGGTGGTCCTTGAGTCCCGCAGTCGCATTCGAGTGCGGCAAGACCTGGCATCTCTCCCAGCTGAACTTATCAACCAGATTGGCAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001975.6 ENSMUST00000238434.2 |
||
| CDS GCA 72 bp | CGCCATCGTGGCTGGCTGTCTCGAAGCTGTGTTCCATaGTCATCATGTCCGGTTCTATCTTGCAAGTGTCGC | + |
|
Preference number: 6 (lower is better) Translates to: RHRGWLSRSCVP*SSCPVLSCKCR Trigger: GCGACACTTGCAAGATAGAACCGGACATGATGAGCATGGAACACAGCTTCGAGACAGCCAGCCACGATGGCG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| CDS GCA 72 bp | ATTGCCAATCTGGTTGATAAGTTCAGCTGGGAGAGATaGCAGGTCTTGCCGCACTCGAATGCGACTGCGGGA | + |
|
Preference number: 6 (lower is better) Translates to: IANLVDKFSWER*QVLPHSNATAG Trigger: TCCCGCAGTCGCATTCGAGTGCGGCAAGACCTGGCATCTCTCCCAGCTGAACTTATCAACCAGATTGGCAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001975.6 ENSMUST00000238434.2 |
||
| CDS GCA 72 bp | TTCGTCTGGGGTCATTGGTGGAAGAACGGATGCCGGTaGCACAGCTATTGGCCAGTGTATTCCGGTCAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: FVWGHWWKNGCR*HSYWPVYSGQR Trigger: TCTTTGACCGGAATACACTGGCCAATAGCTGTGGCACCGGCATCCGTTCTTCCACCAATGACCCCAGACGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001975.6 ENSMUST00000238434.2 |
||
| CDS CCA 72 bp | GTGGCAACGATTGCCAATCTGGTTGATAAGTTCAGCTaGGAGAGATGCCAGGTCTTGCCGCACTCGAATGCG | + |
|
Preference number: 6 (lower is better) Translates to: VATIANLVDKFS*ERCQVLPHSNA Trigger: CGCATTCGAGTGCGGCAAGACCTGGCATCTCTCCCAGCTGAACTTATCAACCAGATTGGCAATCGTTGCCAC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001975.6 ENSMUST00000238434.2 |
||
| CDS CCA 72 bp | CATTGGTGGAAGAACGGATGCCGGTGCCACAGCTATTaGCCAGTGTATTCCGGTCAAAGAAGGAAGCCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: HWWKNGCRCHSY*PVYSGQRRKPE Trigger: TTCTGGCTTCCTTCTTTGACCGGAATACACTGGCCAATAGCTGTGGCACCGGCATCCGTTCTTCCACCAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001975.6 ENSMUST00000238434.2 |
||
| CDS CAA 72 bp | GACACGTCACAGTATAGTCCCTGTAGCCGCTGCTCATaGAGGCACTCAAGGATGCTGTTGCCGAAGTTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: DTSQYSPCSRCS*RHSRMLLPKFG Trigger: TCCAAACTTCGGCAACAGCATCCTTGAGTGCCTCAATGAGCAGCGGCTACAGGGACTATACTGTGACGTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001975.6 ENSMUST00000238301.2 ENSMUST00000238449.2 ENSMUST00000238687.2 |
||
| CDS CAA 72 bp | TGCAGGCCCTGGGAGTCGCAACTTGGAGAGCTAACTTaGAGGAAGAACTCAGTGCCTTTCTCCATGATCTCC | + |
|
Preference number: 6 (lower is better) Translates to: CRPWESQLGELT*RKNSVPFSMIS Trigger: GGAGATCATGGAGAAAGGCACTGAGTTCTTCCTCAAAGTTAGCTCTCCAAGTTGCGACTCCCAGGGCCTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001975.6 ENSMUST00000238301.2 ENSMUST00000238434.2 ENSMUST00000238449.2 |
||
| CDS CAA 72 bp | TCATTGGTGGAAGAACGGATGCCGGTGCCACAGCTATaGGCCAGTGTATTCCGGTCAAAGAAGGAAGCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: SLVEERMPVPQL*ASVFRSKKEAR Trigger: TCTGGCTTCCTTCTTTGACCGGAATACACTGGCCAATAGCTGTGGCACCGGCATCCGTTCTTCCACCAATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001975.6 ENSMUST00000238434.2 |
||
| CDS CAA 90 bp | ACCACTACTGACACGTCACAGTATAGTCCCTGTAGCCGCTGCTCATaGAGGCACTCAAGGATGCTGTTGCCGAAGTTTGGAATCTCCATC | + |
|
Preference number: 6 (lower is better) Translates to: TTTDTSQYSPCSRCS*RHSRMLLPKFGISI Trigger: GATGGAGATTCCAAACTTCGGCAACAGCATCCTTGAGTGCCTCAATGAGCAGCGGCTACAGGGACTATACTGTGACGTGTCAGTAGTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001975.6 ENSMUST00000238301.2 ENSMUST00000238449.2 ENSMUST00000238687.2 |
||
| CDS GCA 72 bp | GATCTGACGGTACTGCTCATCTGTGCCCTCCTCACCTaGATCTTCTTCTTCGTCCTCTTCATTGTGGTAGGA | + |
|
Preference number: 6 (lower is better) Translates to: DLTVLLICALLT*IFFFVLFIVVG Trigger: TCCTACCACAATGAAGAGGACGAAGAAGAAGATGCAGGTGAGGAGGGCACAGATGAGCAGTACCGTCAGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| CDS CAA 72 bp | TGTAGCCGCTGCTCATTGAGGCACTCAAGGATGCTGTaGCCGAAGTTTGGAATCTCCATCTGTAAGGTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: CSRCSLRHSRML*PKFGISICKVC Trigger: GCAGACCTTACAGATGGAGATTCCAAACTTCGGCAACAGCATCCTTGAGTGCCTCAATGAGCAGCGGCTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001975.6 ENSMUST00000238301.2 ENSMUST00000238449.2 ENSMUST00000238687.2 |
||
| CDS CAA 90 bp | CCTCTACCTTCTCAGCTGTCTGGCCAACGTTCAACATACTGTACATaGTATACATATTGCAGATCTGACGGTACTGCTCATCTGTGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: PLPSQLSGQRSTYCT*YTYCRSDGTAHLCP Trigger: AGGGCACAGATGAGCAGTACCGTCAGATCTGCAATATGTATACAATGTACAGTATGTTGAACGTTGGCCAGACAGCTGAGAAGGTAGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| CDS CCA 72 bp | ACCTGCTCAGGAAGGGCCTCTACCTTCTCAGCTGTCTaGCCAACGTTCAACATACTGTACATTGTATACATA | + |
|
Preference number: 6 (lower is better) Translates to: TCSGRASTFSAV*PTFNILYIVYI Trigger: TATGTATACAATGTACAGTATGTTGAACGTTGGCCAGACAGCTGAGAAGGTAGAGGCCCTTCCTGAGCAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| CDS GCA 72 bp | GGCCAACGTTCAACATACTGTACATTGTATACATATTaGAGATCTGACGGTACTGCTCATCTGTGCCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: GQRSTYCTLYTY*RSDGTAHLCPP Trigger: AGGAGGGCACAGATGAGCAGTACCGTCAGATCTGCAATATGTATACAATGTACAGTATGTTGAACGTTGGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| CDS TCA 72 bp | TTCAACATACTGTACATTGTATACATATTGCAGATCTaGCGGTACTGCTCATCTGTGCCCTCCTCACCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: FNILYIVYILQI*RYCSSVPSSPA Trigger: TGCAGGTGAGGAGGGCACAGATGAGCAGTACCGTCAGATCTGCAATATGTATACAATGTACAGTATGTTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||
| CDS CAA 72 bp | TCTCAGCTGTCTGGCCAACGTTCAACATACTGTACATaGTATACATATTGCAGATCTGACGGTACTGCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: SQLSGQRSTYCT*YTYCRSDGTAH Trigger: ATGAGCAGTACCGTCAGATCTGCAATATGTATACAATGTACAGTATGTTGAACGTTGGCCAGACAGCTGAGA 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001975.6 |
||