Pregenerated sensors for NACA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000061315Ensembl transcript IDs: ENSMUST00000092048.13
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GGGCATGTTGACGAGGATCGGCTGGAAAGGCTCTCCCCCAGAGACTaGTTCCGGGGGAATCAGAGGCGGCAGCTCATCCTCCTCAGCAGG | + |
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Preference number: 5 (lower is better) Translates to: GHVDEDRLERLSPRD*FRGNQRRQLILLSR Trigger: CCTGCTGAGGAGGATGAGCTGCCGCCTCTGATTCCCCCGGAAGCAGTCTCTGGGGGAGAGCCTTTCCAGCCGATCCTCGTCAACATGCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS GCA 90 bp | AGCAGGGACTGGGAGCTTAGAGGGGGACTCCAGCACCGACCCAGGTaGAGACTCAAGAAGTGGCTGTTTAGGAGGCAGAGGGGCAACTGG | + |
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Preference number: 5 (lower is better) Translates to: SRDWELRGGLQHRPR*RLKKWLFRRQRGNW Trigger: CCAGTTGCCCCTCTGCCTCCTAAACAGCCACTTCTTGAGTCTGCACCTGGGTCGGTGCTGGAGTCCCCCTCTAAGCTCCCAGTCCCTGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS CCA 90 bp | CTAGACCTATCATGGGAGAGGCCAAGGCTAGCGCAGCTGGGGAAATaGGAGGCCCTATCAGGTGTGGCAGGAAAGTTGGGGTGGGAGGGG | + |
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Preference number: 5 (lower is better) Translates to: LDLSWERPRLAQLGK*EALSGVAGKLGWEG Trigger: CCCCTCCCACCCCAACTTTCCTGCCACACCTGATAGGGCCTCCCATTTCCCCAGCTGCGCTAGCCTTGGCCTCTCCCATGATAGGTCTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS CCA 90 bp | AGGGAGCCGAGGAGGACCTGGCACCTTTCTGAGCTAGACCTATCATaGGAGAGGCCAAGGCTAGCGCAGCTGGGGAAATGGGAGGCCCTA | + |
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Preference number: 5 (lower is better) Translates to: REPRRTWHLSELDLS*ERPRLAQLGKWEAL Trigger: TAGGGCCTCCCATTTCCCCAGCTGCGCTAGCCTTGGCCTCTCCCATGATAGGTCTAGCTCAGAAAGGTGCCAGGTCCTCCTCGGCTCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS TCA 90 bp | TTCCTGTGTCTCGGCAGGGACAGGCACTTTGGAGGCTGTAGTTGCTaGGGCCTTCTGTGGGGTGGCAGGCTTCTCTGGTGGCACAGTGGT | + |
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Preference number: 5 (lower is better) Translates to: FLCLGRDRHFGGCSC*GLLWGGRLLWWHSG Trigger: ACCACTGTGCCACCAGAGAAGCCTGCCACCCCACAGAAGGCCTCAGCAACTACAGCCTCCAAAGTGCCTGTCCCTGCCGAGACACAGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS TCA 90 bp | GGCACCCCTAGAGTAGCTGATGCTGGAGGAGCAGGAAACTGCTTGTaGGCAGCAGGTACGACGAGTGACGTGACAGGGGAAGCTGGGTCT | + |
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Preference number: 5 (lower is better) Translates to: GTPRVADAGGAGNCL*AAGTTSDVTGEAGS Trigger: AGACCCAGCTTCCCCTGTCACGTCACTCGTCGTACCTGCTGCTCACAAGCAGTTTCCTGCTCCTCCAGCATCAGCTACTCTAGGGGTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS CCA 90 bp | CTTTGTCGTCAGATGGAGCTGCCCCAGAATCAACAGCCAGCAGCCTaGAGGGAAGGGCAGGAACTACACATCTCTCAGGTGGGCAAGAGG | + |
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Preference number: 5 (lower is better) Translates to: LCRQMELPQNQQPAA*REGQELHISQVGKR Trigger: CCTCTTGCCCACCTGAGAGATGTGTAGTTCCTGCCCTTCCCTCCAGGCTGCTGGCTGTTGATTCTGGGGCAGCTCCATCTGACGACAAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS CCA 90 bp | GCTGCAGAGCTCATTAGTAACAGCAGAGGAGCCTTTGTCGTCAGATaGAGCTGCCCCAGAATCAACAGCCAGCAGCCTGGAGGGAAGGGC | + |
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Preference number: 5 (lower is better) Translates to: AAELISNSRGAFVVR*SCPRINSQQPGGKG Trigger: GCCCTTCCCTCCAGGCTGCTGGCTGTTGATTCTGGGGCAGCTCCATCTGACGACAAAGGCTCCTCTGCTGTTACTAATGAGCTCTGCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS TCA 90 bp | AGGAGGGGTAGGTCCAGGCTGCCCTACAGCAGCAACTTTCAAGGCTaGAGACATAGGAAGCACAGCTGTCTCAGCCTGAGGCTGTGGCAA | + |
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Preference number: 5 (lower is better) Translates to: RRGRSRLPYSSNFQG*RHRKHSCLSLRLWQ Trigger: TTGCCACAGCCTCAGGCTGAGACAGCTGTGCTTCCTATGTCTTCAGCCTTGAAAGTTGCTGCTGTAGGGCAGCCTGGACCTACCCCTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS GCA 90 bp | GAGCTCATTAGTAACAGCAGAGGAGCCTTTGTCGTCAGATGGAGCTaGCCCAGAATCAACAGCCAGCAGCCTGGAGGGAAGGGCAGGAAC | + |
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Preference number: 5 (lower is better) Translates to: ELISNSRGAFVVRWS*PRINSQQPGGKGRN Trigger: GTTCCTGCCCTTCCCTCCAGGCTGCTGGCTGTTGATTCTGGGGCAGCTCCATCTGACGACAAAGGCTCCTCTGCTGTTACTAATGAGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS CCA 90 bp | GAGGGAGGTAGGAATCTCAGTAGGAACAATGGTGGCTTCATTAGATaGGGCTACAGGGGCCTTTGGGGGAGACAGGGAAGTCACAGCCGG | + |
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Preference number: 5 (lower is better) Translates to: EGGRNLSRNNGGFIR*GYRGLWGRQGSHSR Trigger: CCGGCTGTGACTTCCCTGTCTCCCCCAAAGGCCCCTGTAGCCCCATCTAATGAAGCCACCATTGTTCCTACTGAGATTCCTACCTCCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS CCA 90 bp | AATGAGGAGCTAATGCGACCAGAGACAAGGGAGCCGAGGAGGACCTaGCACCTTTCTGAGCTAGACCTATCATGGGAGAGGCCAAGGCTA | + |
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Preference number: 5 (lower is better) Translates to: NEELMRPETREPRRT*HLSELDLSWERPRL Trigger: TAGCCTTGGCCTCTCCCATGATAGGTCTAGCTCAGAAAGGTGCCAGGTCCTCCTCGGCTCCCTTGTCTCTGGTCGCATTAGCTCCTCATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS CCA 90 bp | AGCCAGCAGCCTGGAGGGAAGGGCAGGAACTACACATCTCTCAGGTaGGCAAGAGGCTGCAATACCAGAGTGACCTACAGAAGTGGGATT | + |
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Preference number: 5 (lower is better) Translates to: SQQPGGKGRNYTSLR*ARGCNTRVTYRSGI Trigger: AATCCCACTTCTGTAGGTCACTCTGGTATTGCAGCCTCTTGCCCACCTGAGAGATGTGTAGTTCCTGCCCTTCCCTCCAGGCTGCTGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS CCA 90 bp | TACTGCAGAAGGGAGGCCCTTTGTGTCTTTCTTAGAGGAGGGGTCTaGGCACTTAGGAGAGGAAGCAGAATTGCTGTTGGCCCCTGGGCT | + |
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Preference number: 5 (lower is better) Translates to: YCRREALCVFLRGGV*ALRRGSRIAVGPWA Trigger: AGCCCAGGGGCCAACAGCAATTCTGCTTCCTCTCCTAAGTGCCCAGACCCCTCCTCTAAGAAAGACACAAAGGGCCTCCCTTCTGCAGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS TCA 90 bp | AGGGGCCCCTTTGGAGGATGGAGGAGTGGGAGAAAGCTTATTAAGTaGGCCTTTAGGGCCTTGAACAGCCAGACCTGCCTCTGGAAGGAA | + |
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Preference number: 5 (lower is better) Translates to: RGPFGGWRSGRKLIK*AFRALNSQTCLWKE Trigger: TTCCTTCCAGAGGCAGGTCTGGCTGTTCAAGGCCCTAAAGGCTCACTTAATAAGCTTTCTCCCACTCCTCCATCCTCCAAAGGGGCCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS GCA 90 bp | ACAAGATGGGATTGTTGTGGCCTCTTTTGGAGCTGTTTGAGGAGCTaGAGTAGCTGGGGAAAGGGAAGCACTTGCAGCAGCTGGAGCTGC | + |
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Preference number: 5 (lower is better) Translates to: TRWDCCGLFWSCLRS*SSWGKGSTCSSWSC Trigger: GCAGCTCCAGCTGCTGCAAGTGCTTCCCTTTCCCCAGCTACTGCAGCTCCTCAAACAGCTCCAAAAGAGGCCACAACAATCCCATCTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS CCA 90 bp | CTGATGAAGTTGGAGGAGGCACATGAGTGGCAGGTGCTACAGAAATaGCAGAAGGGTTATCCAGGGCATGGTGGGTGGCTCCAATACAGG | + |
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Preference number: 5 (lower is better) Translates to: LMKLEEAHEWQVLQK*QKGYPGHGGWLQYR Trigger: CCTGTATTGGAGCCACCCACCATGCCCTGGATAACCCTTCTGCCATTTCTGTAGCACCTGCCACTCATGTGCCTCCTCCAACTTCATCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS CCA 90 bp | GCCAAGGGCTGCAGAGTAGTGTCTTTTCTGGTAGGGAGCCCTGCCTaGGCTGGAGAAACAGGGGCGCCTACATTTACTAATGCCGAAATA | + |
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Preference number: 5 (lower is better) Translates to: AKGCRVVSFLVGSPA*AGETGAPTFTNAEI Trigger: TATTTCGGCATTAGTAAATGTAGGCGCCCCTGTTTCTCCAGCCCAGGCAGGGCTCCCTACCAGAAAAGACACTACTCTGCAGCCCTTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS TCA 90 bp | AAGCAGAATTGCTGTTGGCCCCTGGGCTTTTCTGAATGGGAGCAGTaGTGGCCAAAGCACTTTCTGGAGCAGGTGCAGCAAGCATTTCCG | + |
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Preference number: 5 (lower is better) Translates to: KQNCCWPLGFSEWEQ*WPKHFLEQVQQAFP Trigger: CGGAAATGCTTGCTGCACCTGCTCCAGAAAGTGCTTTGGCCATCACTGCTCCCATTCAGAAAAGCCCAGGGGCCAACAGCAATTCTGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS TCA 90 bp | CACTTAGGAGAGGAAGCAGAATTGCTGTTGGCCCCTGGGCTTTTCTaGATGGGAGCAGTGATGGCCAAAGCACTTTCTGGAGCAGGTGCA | + |
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Preference number: 5 (lower is better) Translates to: HLGEEAELLLAPGLF*MGAVMAKALSGAGA Trigger: TGCACCTGCTCCAGAAAGTGCTTTGGCCATCACTGCTCCCATTCAGAAAAGCCCAGGGGCCAACAGCAATTCTGCTTCCTCTCCTAAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS CCA 90 bp | GACAGTGTTTGGGCTGACACAAGAATCTGCCCTGATGACAGCAGGTaGAGAGTCAGCACGCAGGGAAGTAGTAGTAGCAACCCCAGCAAT | + |
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Preference number: 5 (lower is better) Translates to: DSVWADTRICPDDSR*RVSTQGSSSSNPSN Trigger: ATTGCTGGGGTTGCTACTACTACTTCCCTGCGTGCTGACTCTCCACCTGCTGTCATCAGGGCAGATTCTTGTGTCAGCCCAAACACTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS TCA 90 bp | AATACCAGAGTGACCTACAGAAGTGGGATTACTCACTGCAAGCCCTaGCTGACCTGGAGGCTGGATGGGAGAATCCACAGAACTGTGATG | + |
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Preference number: 5 (lower is better) Translates to: NTRVTYRSGITHCKP*LTWRLDGRIHRTVM Trigger: CATCACAGTTCTGTGGATTCTCCCATCCAGCCTCCAGGTCAGTCAGGGCTTGCAGTGAGTAATCCCACTTCTGTAGGTCACTCTGGTATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS TCA 90 bp | GATGGAGGAGTGGGAGAAAGCTTATTAAGTGAGCCTTTAGGGCCTTaGACAGCCAGACCTGCCTCTGGAAGGAAAGAAACCTCAAGTGGG | + |
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Preference number: 5 (lower is better) Translates to: DGGVGESLLSEPLGP*TARPASGRKETSSG Trigger: CCCACTTGAGGTTTCTTTCCTTCCAGAGGCAGGTCTGGCTGTTCAAGGCCCTAAAGGCTCACTTAATAAGCTTTCTCCCACTCCTCCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS TCA 90 bp | GTGGGAAGGAGGAATCTCCAGTGGCACAGCTGTGGCCCCTTCAAGTaGAGTTTCTTTGGGACCTACAGTTTGGGAGAGCTTTTTGGAAGA | + |
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Preference number: 5 (lower is better) Translates to: VGRRNLQWHSCGPFK*SFFGTYSLGELFGR Trigger: TCTTCCAAAAAGCTCTCCCAAACTGTAGGTCCCAAAGAAACTTCACTTGAAGGGGCCACAGCTGTGCCACTGGAGATTCCTCCTTCCCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS TCA 90 bp | AGTCGATGGTGCCTTTTGCAGACTGGGAGGAGCTGTCTGTGCCAGTaGGGTGGTGACAGGTTTAATAGAAGGGCTTGCTGGAAACTCTTT | + |
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Preference number: 5 (lower is better) Translates to: SRWCLLQTGRSCLCQ*GGDRFNRRACWKLF Trigger: AAAGAGTTTCCAGCAAGCCCTTCTATTAAACCTGTCACCACCTCACTGGCACAGACAGCTCCTCCCAGTCTGCAAAAGGCACCATCGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS TCA 90 bp | CACTGGGGAAATATGAGAGTCTTTTCCGGAAGAAGTGGCAGTGGGTaGGAGAACAGAGGCCTCTTTAAGAGAGGGAAGAGTTGTAGCTGG | + |
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Preference number: 5 (lower is better) Translates to: HWGNMRVFSGRSGSG*ENRGLFKRGKSCSW Trigger: CCAGCTACAACTCTTCCCTCTCTTAAAGAGGCCTCTGTTCTCTCACCCACTGCCACTTCTTCCGGAAAAGACTCTCATATTTCCCCAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS CCA 90 bp | ATTTCAGGGGACAATGCCAAAGCAGTCTCAGAAACAGAAGCATTCTaGGGGGACAAAGCCATAGATGAAGCCACAGGACAGCCTTCAGAG | + |
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Preference number: 5 (lower is better) Translates to: ISGDNAKAVSETEAF*GDKAIDEATGQPSE Trigger: CTCTGAAGGCTGTCCTGTGGCTTCATCTATGGCTTTGTCCCCCCAGAATGCTTCTGTTTCTGAGACTGCTTTGGCATTGTCCCCTGAAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS CCA 90 bp | GTGGCAGGTGCTACAGAAATGGCAGAAGGGTTATCCAGGGCATGGTaGGTGGCTCCAATACAGGAGACAGGAATTTCTTTTAAACCAGTT | + |
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Preference number: 5 (lower is better) Translates to: VAGATEMAEGLSRAW*VAPIQETGISFKPV Trigger: AACTGGTTTAAAAGAAATTCCTGTCTCCTGTATTGGAGCCACCCACCATGCCCTGGATAACCCTTCTGCCATTTCTGTAGCACCTGCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS CCA 90 bp | GAGGTAGGGGTCACGTCTGACATAATAGGGTCTACTTTAGGAGACTaGACTGCTGAGATCAGTCTGGAAGCTGTAACTTCTGGGGTCTTT | + |
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Preference number: 5 (lower is better) Translates to: EVGVTSDIIGSTLGD*TAEISLEAVTSGVF Trigger: AAAGACCCCAGAAGTTACAGCTTCCAGACTGATCTCAGCAGTCCAGTCTCCTAAAGTAGACCCTATTATGTCAGACGTGACCCCTACCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS CCA 90 bp | AGTGGTAGAAGGAGCAGTATTTTTGGCAGTTCTAGGAGCCATTGCTaGGTCAGTAACAGAACGTTTGAGAGGCTGACTGACAGTGTTTGG | + |
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Preference number: 5 (lower is better) Translates to: SGRRSSIFGSSRSHC*VSNRTFERLTDSVW Trigger: CCAAACACTGTCAGTCAGCCTCTCAAACGTTCTGTTACTGACCCAGCAATGGCTCCTAGAACTGCCAAAAATACTGCTCCTTCTACCACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS TCA 90 bp | AGAGTTTCTATAGCTTTTGAAGTGTCTTTCTCAACAGGAACTGTCTaGGGGGCTAGAGCTACTGCAGAAGGGAGGCCCTTTGTGTCTTTC | + |
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Preference number: 5 (lower is better) Translates to: RVSIAFEVSFSTGTV*GARATAEGRPFVSF Trigger: GAAAGACACAAAGGGCCTCCCTTCTGCAGTAGCTCTAGCCCCTCAGACAGTTCCTGTTGAGAAAGACACTTCAAAAGCTATAGAAACTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS GCA 72 bp | GACGAGGATCGGCTGGAAAGGCTCTCCCCCAGAGACTaGTTCCGGGGGAATCAGAGGCGGCAGCTCATCCTC | + |
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Preference number: 6 (lower is better) Translates to: DEDRLERLSPRD*FRGNQRRQLIL Trigger: GAGGATGAGCTGCCGCCTCTGATTCCCCCGGAAGCAGTCTCTGGGGGAGAGCCTTTCCAGCCGATCCTCGTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS TCA 72 bp | CTCGGCAGGGACAGGCACTTTGGAGGCTGTAGTTGCTaGGGCCTTCTGTGGGGTGGCAGGCTTCTCTGGTGG | + |
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Preference number: 6 (lower is better) Translates to: LGRDRHFGGCSC*GLLWGGRLLWW Trigger: CCACCAGAGAAGCCTGCCACCCCACAGAAGGCCTCAGCAACTACAGCCTCCAAAGTGCCTGTCCCTGCCGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS CCA 72 bp | TGCAGTAGCTGGGGAAAGGGAAGCACTTGCAGCAGCTaGAGCTGCTGGGCTCTTGCTGGAGACAGGCAGAAC | + |
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Preference number: 6 (lower is better) Translates to: CSSWGKGSTCSS*SCWALAGDRQN Trigger: GTTCTGCCTGTCTCCAGCAAGAGCCCAGCAGCTCCAGCTGCTGCAAGTGCTTCCCTTTCCCCAGCTACTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS TCA 72 bp | AGAGACAAGGGAGCCGAGGAGGACCTGGCACCTTTCTaGGCTAGACCTATCATGGGAGAGGCCAAGGCTAGC | + |
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Preference number: 6 (lower is better) Translates to: RDKGAEEDLAPF*ARPIMGEAKAS Trigger: GCTAGCCTTGGCCTCTCCCATGATAGGTCTAGCTCAGAAAGGTGCCAGGTCCTCCTCGGCTCCCTTGTCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS CCA 72 bp | AGGAGGACCTGGCACCTTTCTGAGCTAGACCTATCATaGGAGAGGCCAAGGCTAGCGCAGCTGGGGAAATGG | + |
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Preference number: 6 (lower is better) Translates to: RRTWHLSELDLS*ERPRLAQLGKW Trigger: CCATTTCCCCAGCTGCGCTAGCCTTGGCCTCTCCCATGATAGGTCTAGCTCAGAAAGGTGCCAGGTCCTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS CCA 72 bp | GGCCTCTTTTGGAGCTGTTTGAGGAGCTGCAGTAGCTaGGGAAAGGGAAGCACTTGCAGCAGCTGGAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: GLFWSCLRSCSS*GKGSTCSSWSC Trigger: GCAGCTCCAGCTGCTGCAAGTGCTTCCCTTTCCCCAGCTACTGCAGCTCCTCAAACAGCTCCAAAAGAGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS CAA 72 bp | GAGGCAGGACTCTCAGCTAGGGCATTAGGGGCACCTTaGGGAGTTAGGGTCACAGGAACCCCTTTGGAGGCT | + |
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Preference number: 6 (lower is better) Translates to: EAGLSARALGAP*GVRVTGTPLEA Trigger: AGCCTCCAAAGGGGTTCCTGTGACCCTAACTCCCAAAGGTGCCCCTAATGCCCTAGCTGAGAGTCCTGCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS CAA 72 bp | ACAGCAACTTCCTGTGTCTCGGCAGGGACAGGCACTTaGGAGGCTGTAGTTGCTGAGGCCTTCTGTGGGGTG | + |
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Preference number: 6 (lower is better) Translates to: TATSCVSAGTGT*EAVVAEAFCGV Trigger: CACCCCACAGAAGGCCTCAGCAACTACAGCCTCCAAAGTGCCTGTCCCTGCCGAGACACAGGAAGTTGCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS GCA 72 bp | GAGGGAGACTCTTTAAGTGCTATGGGGGCCAAGGGCTaGAGAGTAGTGTCTTTTCTGGTAGGGAGCCCTGCC | + |
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Preference number: 6 (lower is better) Translates to: EGDSLSAMGAKG*RVVSFLVGSPA Trigger: GGCAGGGCTCCCTACCAGAAAAGACACTACTCTGCAGCCCTTGGCCCCCATAGCACTTAAAGAGTCTCCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS CCA 72 bp | CTAATGCGACCAGAGACAAGGGAGCCGAGGAGGACCTaGCACCTTTCTGAGCTAGACCTATCATGGGAGAGG | + |
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Preference number: 6 (lower is better) Translates to: LMRPETREPRRT*HLSELDLSWER Trigger: CCTCTCCCATGATAGGTCTAGCTCAGAAAGGTGCCAGGTCCTCCTCGGCTCCCTTGTCTCTGGTCGCATTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS TCA 72 bp | AGGTCCAGGCTGCCCTACAGCAGCAACTTTCAAGGCTaGAGACATAGGAAGCACAGCTGTCTCAGCCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: RSRLPYSSNFQG*RHRKHSCLSLR Trigger: CCTCAGGCTGAGACAGCTGTGCTTCCTATGTCTTCAGCCTTGAAAGTTGCTGCTGTAGGGCAGCCTGGACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS TCA 72 bp | TGCTGTTGGCCCCTGGGCTTTTCTGAATGGGAGCAGTaGTGGCCAAAGCACTTTCTGGAGCAGGTGCAGCAA | + |
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Preference number: 6 (lower is better) Translates to: CCWPLGFSEWEQ*WPKHFLEQVQQ Trigger: TTGCTGCACCTGCTCCAGAAAGTGCTTTGGCCATCACTGCTCCCATTCAGAAAAGCCCAGGGGCCAACAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS CCA 72 bp | CCTGGAGGGAAGGGCAGGAACTACACATCTCTCAGGTaGGCAAGAGGCTGCAATACCAGAGTGACCTACAGA | + |
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Preference number: 6 (lower is better) Translates to: PGGKGRNYTSLR*ARGCNTRVTYR Trigger: TCTGTAGGTCACTCTGGTATTGCAGCCTCTTGCCCACCTGAGAGATGTGTAGTTCCTGCCCTTCCCTCCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS CAA 72 bp | GGGCTGCAGAGCTCATTAGTAACAGCAGAGGAGCCTTaGTCGTCAGATGGAGCTGCCCCAGAATCAACAGCC | + |
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Preference number: 6 (lower is better) Translates to: GLQSSLVTAEEP*SSDGAAPESTA Trigger: GGCTGTTGATTCTGGGGCAGCTCCATCTGACGACAAAGGCTCCTCTGCTGTTACTAATGAGCTCTGCAGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS CAA 72 bp | GAGTTAGGGTCACAGGAACCCCTTTGGAGGCTGGAGTaGGGGGTGAAGGAGAAATCTCAGATGGCACAGCTG | + |
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Preference number: 6 (lower is better) Translates to: ELGSQEPLWRLE*GVKEKSQMAQL Trigger: CAGCTGTGCCATCTGAGATTTCTCCTTCACCCCCAACTCCAGCCTCCAAAGGGGTTCCTGTGACCCTAACTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS CAA 72 bp | GGAGCCACAGATGCAGACACAGCTTCCGGAGGGACTTaGTCAGAGGTAAACGCTGCTAGTGGAGTAGCTACC | + |
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Preference number: 6 (lower is better) Translates to: GATDADTASGGT*SEVNAASGVAT Trigger: GGTAGCTACTCCACTAGCAGCGTTTACCTCTGACAAAGTCCCTCCGGAAGCTGTGTCTGCATCTGTGGCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS TCA 72 bp | GTGACCTACAGAAGTGGGATTACTCACTGCAAGCCCTaGCTGACCTGGAGGCTGGATGGGAGAATCCACAGA | + |
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Preference number: 6 (lower is better) Translates to: VTYRSGITHCKP*LTWRLDGRIHR Trigger: TCTGTGGATTCTCCCATCCAGCCTCCAGGTCAGTCAGGGCTTGCAGTGAGTAATCCCACTTCTGTAGGTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS TCA 72 bp | AGCAGGAAACTGCTTGTGAGCAGCAGGTACGACGAGTaGCGTGACAGGGGAAGCTGGGTCTTTACTACTCAC | + |
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Preference number: 6 (lower is better) Translates to: SRKLLVSSRYDE*RDRGSWVFTTH Trigger: GTGAGTAGTAAAGACCCAGCTTCCCCTGTCACGTCACTCGTCGTACCTGCTGCTCACAAGCAGTTTCCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS TCA 72 bp | TGCCTTTTGCAGACTGGGAGGAGCTGTCTGTGCCAGTaGGGTGGTGACAGGTTTAATAGAAGGGCTTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: CLLQTGRSCLCQ*GGDRFNRRACW Trigger: CCAGCAAGCCCTTCTATTAAACCTGTCACCACCTCACTGGCACAGACAGCTCCTCCCAGTCTGCAAAAGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS GCA 72 bp | GATTGTTGTGGCCTCTTTTGGAGCTGTTTGAGGAGCTaGAGTAGCTGGGGAAAGGGAAGCACTTGCAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: DCCGLFWSCLRS*SSWGKGSTCSS Trigger: GCTGCTGCAAGTGCTTCCCTTTCCCCAGCTACTGCAGCTCCTCAAACAGCTCCAAAAGAGGCCACAACAATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS CCA 72 bp | CTCATTAGTAACAGCAGAGGAGCCTTTGTCGTCAGATaGAGCTGCCCCAGAATCAACAGCCAGCAGCCTGGA | + |
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Preference number: 6 (lower is better) Translates to: LISNSRGAFVVR*SCPRINSQQPG Trigger: TCCAGGCTGCTGGCTGTTGATTCTGGGGCAGCTCCATCTGACGACAAAGGCTCCTCTGCTGTTACTAATGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS CCA 72 bp | TGGGCTGACACAAGAATCTGCCCTGATGACAGCAGGTaGAGAGTCAGCACGCAGGGAAGTAGTAGTAGCAAC | + |
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Preference number: 6 (lower is better) Translates to: WADTRICPDDSR*RVSTQGSSSSN Trigger: GTTGCTACTACTACTTCCCTGCGTGCTGACTCTCCACCTGCTGTCATCAGGGCAGATTCTTGTGTCAGCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS CCA 72 bp | GCACTTAGGAGAGGAAGCAGAATTGCTGTTGGCCCCTaGGCTTTTCTGAATGGGAGCAGTGATGGCCAAAGC | + |
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Preference number: 6 (lower is better) Translates to: ALRRGSRIAVGP*AFLNGSSDGQS Trigger: GCTTTGGCCATCACTGCTCCCATTCAGAAAAGCCCAGGGGCCAACAGCAATTCTGCTTCCTCTCCTAAGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS CCA 72 bp | AGGGAGGCCCTTTGTGTCTTTCTTAGAGGAGGGGTCTaGGCACTTAGGAGAGGAAGCAGAATTGCTGTTGGC | + |
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Preference number: 6 (lower is better) Translates to: REALCVFLRGGV*ALRRGSRIAVG Trigger: GCCAACAGCAATTCTGCTTCCTCTCCTAAGTGCCCAGACCCCTCCTCTAAGAAAGACACAAAGGGCCTCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS TCA 72 bp | AGAAACCTCAAGTGGGTAGAGAGGAGACGAAGCACCTaGGAGAGCAGAGCCCTTGGATGCAGACACACTAGT | + |
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Preference number: 6 (lower is better) Translates to: RNLKWVERRRST*ESRALGCRHTS Trigger: ACTAGTGTGTCTGCATCCAAGGGCTCTGCTCTCTCAGGTGCTTCGTCTCCTCTCTACCCACTTGAGGTTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS TCA 72 bp | GAGGAAGCAGAATTGCTGTTGGCCCCTGGGCTTTTCTaGATGGGAGCAGTGATGGCCAAAGCACTTTCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: EEAELLLAPGLF*MGAVMAKALSG Trigger: TCCAGAAAGTGCTTTGGCCATCACTGCTCCCATTCAGAAAAGCCCAGGGGCCAACAGCAATTCTGCTTCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS GCA 72 bp | TTCAGGAGATGGGGTTGTAGGTGTTTCTTTGGAGCCTaGTTTCTTAGAGCCCTTCCTGGGGGAGGGAGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: FRRWGCRCFFGA*FLRALPGGGRN Trigger: ATTCCTCCCTCCCCCAGGAAGGGCTCTAAGAAAGCAGGCTCCAAAGAAACACCTACAACCCCATCTCCTGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS GCA 72 bp | GGGAGCAGTGATGGCCAAAGCACTTTCTGGAGCAGGTaGAGCAAGCATTTCCGTGAAAGCTGTAGGACCTTT | + |
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Preference number: 6 (lower is better) Translates to: GSSDGQSTFWSR*SKHFRESCRTF Trigger: AAAGGTCCTACAGCTTTCACGGAAATGCTTGCTGCACCTGCTCCAGAAAGTGCTTTGGCCATCACTGCTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS CCA 72 bp | GTTCCTGAGGGCAGAGCAGTTTCAGCTGTTATGGGCTaGGCAAAAGGAACTTCAAAGGGGGTCGAGGAAACA | + |
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Preference number: 6 (lower is better) Translates to: VPEGRAVSAVMG*AKGTSKGVEET Trigger: TGTTTCCTCGACCCCCTTTGAAGTTCCTTTTGCCCAGCCCATAACAGCTGAAACTGCTCTGCCCTCAGGAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS CCA 72 bp | TACTCACTGCAAGCCCTGACTGACCTGGAGGCTGGATaGGAGAATCCACAGAACTGTGATGCAGAAGTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: YSLQALTDLEAG*ENPQNCDAEVE Trigger: TTCCACTTCTGCATCACAGTTCTGTGGATTCTCCCATCCAGCCTCCAGGTCAGTCAGGGCTTGCAGTGAGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS CCA 72 bp | CTAAAGATGAGTCAGCTAGACAAACCACAGTCCCTTTaGCAGTCACAGAAGCATCTGGGTGCCCCTGACGAG | + |
|
Preference number: 6 (lower is better) Translates to: LKMSQLDKPQSL*QSQKHLGAPDE Trigger: CTCGTCAGGGGCACCCAGATGCTTCTGTGACTGCCAAAGGGACTGTGGTTTGTCTAGCTGACTCATCTTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS CCA 72 bp | AGGAATCTCAGTAGGAACAATGGTGGCTTCATTAGATaGGGCTACAGGGGCCTTTGGGGGAGACAGGGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: RNLSRNNGGFIR*GYRGLWGRQGS Trigger: ACTTCCCTGTCTCCCCCAAAGGCCCCTGTAGCCCCATCTAATGAAGCCACCATTGTTCCTACTGAGATTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS CAA 72 bp | TTTGGGGGAGACAGGGAAGTCACAGCCGGGACACTTTaGAGAGACAGGGTTGCTGAAGTATCTTTGGGGACT | + |
|
Preference number: 6 (lower is better) Translates to: FGGDREVTAGTL*RDRVAEVSLGT Trigger: AGTCCCCAAAGATACTTCAGCAACCCTGTCTCTCAAAAGTGTCCCGGCTGTGACTTCCCTGTCTCCCCCAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS CAA 90 bp | GGTAGAAGAGGAACCTCTTTGGGAAACTGGGATGGTGAGACGTCTTaGGAGGCTGCAATTTCTGTCGCCTTTTTGGAGGTCATAGCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: GRRGTSLGNWDGETS*EAAISVAFLEVIAG Trigger: CCCGGCTATGACCTCCAAAAAGGCGACAGAAATTGCAGCCTCCAAAGACGTCTCACCATCCCAGTTTCCCAAAGAGGTTCCTCTTCTACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS TCA 72 bp | TTTGGAGGATGGAGGAGTGGGAGAAAGCTTATTAAGTaGGCCTTTAGGGCCTTGAACAGCCAGACCTGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: FGGWRSGRKLIK*AFRALNSQTCL Trigger: GAGGCAGGTCTGGCTGTTCAAGGCCCTAAAGGCTCACTTAATAAGCTTTCTCCCACTCCTCCATCCTCCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS GCA 72 bp | GGCAGGAACTACACATCTCTCAGGTGGGCAAGAGGCTaGAATACCAGAGTGACCTACAGAAGTGGGATTACT | + |
|
Preference number: 6 (lower is better) Translates to: GRNYTSLRWARG*NTRVTYRSGIT Trigger: AGTAATCCCACTTCTGTAGGTCACTCTGGTATTGCAGCCTCTTGCCCACCTGAGAGATGTGTAGTTCCTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS CCA 72 bp | GGTGCTACAGAAATGGCAGAAGGGTTATCCAGGGCATaGTGGGTGGCTCCAATACAGGAGACAGGAATTTCT | + |
|
Preference number: 6 (lower is better) Translates to: GATEMAEGLSRA*WVAPIQETGIS Trigger: AGAAATTCCTGTCTCCTGTATTGGAGCCACCCACCATGCCCTGGATAACCCTTCTGCCATTTCTGTAGCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS CCA 72 bp | TGCTGGGACCTGTTTGGAGGATATAGAACTTTCTGTTaGAACAATAGGGGCTCCTTTAGGGGAGGGAGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: CWDLFGGYRTFC*NNRGSFRGGRS Trigger: GCTCCTCCCTCCCCTAAAGGAGCCCCTATTGTTCCAACAGAAAGTTCTATATCCTCCAAACAGGTCCCAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS CAA 72 bp | GGAACCTCTTTGGGAAACTGGGATGGTGAGACGTCTTaGGAGGCTGCAATTTCTGTCGCCTTTTTGGAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: GTSLGNWDGETS*EAAISVAFLEV Trigger: GACCTCCAAAAAGGCGACAGAAATTGCAGCCTCCAAAGACGTCTCACCATCCCAGTTTCCCAAAGAGGTTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS CAA 90 bp | TTTGGTGGGGAAGTAGGAGGCACATGTGGTAGAAGAGGAACCTCTTaGGGAAACTGGGATGGTGAGACGTCTTTGGAGGCTGCAATTTCT | + |
|
Preference number: 6 (lower is better) Translates to: FGGEVGGTCGRRGTS*GNWDGETSLEAAIS Trigger: AGAAATTGCAGCCTCCAAAGACGTCTCACCATCCCAGTTTCCCAAAGAGGTTCCTCTTCTACCACATGTGCCTCCTACTTCCCCACCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS TCA 72 bp | GTGGGAGAAAGCTTATTAAGTGAGCCTTTAGGGCCTTaGACAGCCAGACCTGCCTCTGGAAGGAAAGAAACC | + |
|
Preference number: 6 (lower is better) Translates to: VGESLLSEPLGP*TARPASGRKET Trigger: GGTTTCTTTCCTTCCAGAGGCAGGTCTGGCTGTTCAAGGCCCTAAAGGCTCACTTAATAAGCTTTCTCCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS TCA 72 bp | GTAGGACCTTTCTTTGATGGGAGCTTTTCAGATGCCTaGGGGGTAGTAGTTCCTGTGCTACAAGCATCGGAC | + |
|
Preference number: 6 (lower is better) Translates to: VGPFFDGSFSDA*GVVVPVLQASD Trigger: GTCCGATGCTTGTAGCACAGGAACTACTACCCCTCAGGCATCTGAAAAGCTCCCATCAAAGAAAGGTCCTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS CCA 72 bp | GAACCTCTTTGGGAAACTGGGATGGTGAGACGTCTTTaGAGGCTGCAATTTCTGTCGCCTTTTTGGAGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: EPLWETGMVRRL*RLQFLSPFWRS Trigger: TGACCTCCAAAAAGGCGACAGAAATTGCAGCCTCCAAAGACGTCTCACCATCCCAGTTTCCCAAAGAGGTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS CCA 72 bp | GGCACATGTGGTAGAAGAGGAACCTCTTTGGGAAACTaGGATGGTGAGACGTCTTTGGAGGCTGCAATTTCT | + |
|
Preference number: 6 (lower is better) Translates to: GTCGRRGTSLGN*DGETSLEAAIS Trigger: AGAAATTGCAGCCTCCAAAGACGTCTCACCATCCCAGTTTCCCAAAGAGGTTCCTCTTCTACCACATGTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS CCA 72 bp | GTGGCACAGCTGTGGCCCCTTCAAGTGAAGTTTCTTTaGGACCTACAGTTTGGGAGAGCTTTTTGGAAGATG | + |
|
Preference number: 6 (lower is better) Translates to: VAQLWPLQVKFL*DLQFGRAFWKM Trigger: CATCTTCCAAAAAGCTCTCCCAAACTGTAGGTCCCAAAGAAACTTCACTTGAAGGGGCCACAGCTGTGCCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS CCA 72 bp | GCTTCTTTGAGCTCTATAGTCTTTGAGGTCTTCTTATaGGAGGAAGGATTCTTGACTGGGGGCACAGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: ASLSSIVFEVFL*EEGFLTGGTAG Trigger: CCCAGCTGTGCCCCCAGTCAAGAATCCTTCCTCCCATAAGAAGACCTCAAAGACTATAGAGCTCAAAGAAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS CCA 72 bp | AGGGGTAGTAGTTCCTGTGCTACAAGCATCGGACACTaGGGAAATATGAGAGTCTTTTCCGGAAGAAGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: RGSSSCATSIGH*GNMRVFSGRSG Trigger: GCCACTTCTTCCGGAAAAGACTCTCATATTTCCCCAGTGTCCGATGCTTGTAGCACAGGAACTACTACCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS CCA 72 bp | TTTCTGAATGGGAGCAGTGATGGCCAAAGCACTTTCTaGAGCAGGTGCAGCAAGCATTTCCGTGAAAGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: FLNGSSDGQSTF*SRCSKHFRESC Trigger: ACAGCTTTCACGGAAATGCTTGCTGCACCTGCTCCAGAAAGTGCTTTGGCCATCACTGCTCCCATTCAGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS TCA 72 bp | AGAGGCTTTAGGAGACAAGGAAGTACCAGCTACATTTaGAGAGCCAGGAGGGCTGCAGAGCTCATTAGTAAC | + |
|
Preference number: 6 (lower is better) Translates to: RGFRRQGSTSYI*RARRAAELISN Trigger: GTTACTAATGAGCTCTGCAGCCCTCCTGGCTCTTCAAATGTAGCTGGTACTTCCTTGTCTCCTAAAGCCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS TCA 72 bp | ATAGCTTTTGAAGTGTCTTTCTCAACAGGAACTGTCTaGGGGGCTAGAGCTACTGCAGAAGGGAGGCCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: IAFEVSFSTGTV*GARATAEGRPF Trigger: AAAGGGCCTCCCTTCTGCAGTAGCTCTAGCCCCTCAGACAGTTCCTGTTGAGAAAGACACTTCAAAAGCTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS CCA 72 bp | CTGAGGAAATGGGGACACCTTTCACTGGGGAAGTGTTaGATAGTGTTTGAGGACAGGACATTAAACCAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: LRKWGHLSLGKC*IVFEDRTLNQA Trigger: AGCCTGGTTTAATGTCCTGTCCTCAAACACTATCCAACACTTCCCCAGTGAAAGGTGTCCCCATTTCCTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS CCA 72 bp | GCTACAGAAATGGCAGAAGGGTTATCCAGGGCATGGTaGGTGGCTCCAATACAGGAGACAGGAATTTCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: ATEMAEGLSRAW*VAPIQETGISF Trigger: AAAAGAAATTCCTGTCTCCTGTATTGGAGCCACCCACCATGCCCTGGATAACCCTTCTGCCATTTCTGTAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS CCA 72 bp | AGGAGCAGTATTTTTGGCAGTTCTAGGAGCCATTGCTaGGTCAGTAACAGAACGTTTGAGAGGCTGACTGAC | + |
|
Preference number: 6 (lower is better) Translates to: RSSIFGSSRSHC*VSNRTFERLTD Trigger: GTCAGTCAGCCTCTCAAACGTTCTGTTACTGACCCAGCAATGGCTCCTAGAACTGCCAAAAATACTGCTCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS CAA 72 bp | AGTGGCACAGCTGTGGCCCCTTCAAGTGAAGTTTCTTaGGGACCTACAGTTTGGGAGAGCTTTTTGGAAGAT | + |
|
Preference number: 6 (lower is better) Translates to: SGTAVAPSSEVS*GPTVWESFLED Trigger: ATCTTCCAAAAAGCTCTCCCAAACTGTAGGTCCCAAAGAAACTTCACTTGAAGGGGCCACAGCTGTGCCACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS TCA 72 bp | AATATGAGAGTCTTTTCCGGAAGAAGTGGCAGTGGGTaGGAGAACAGAGGCCTCTTTAAGAGAGGGAAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: NMRVFSGRSGSG*ENRGLFKRGKS Trigger: ACTCTTCCCTCTCTTAAAGAGGCCTCTGTTCTCTCACCCACTGCCACTTCTTCCGGAAAAGACTCTCATATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS TCA 72 bp | AGCAAGCATTTCCGTGAAAGCTGTAGGACCTTTCTTTaGTGGGAGCTTTTCAGATGCCTGAGGGGTAGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: SKHFRESCRTFL*WELFRCLRGSS Trigger: ACTACTACCCCTCAGGCATCTGAAAAGCTCCCATCAAAGAAAGGTCCTACAGCTTTCACGGAAATGCTTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS CAA 72 bp | GAGTCTTTTGTGGGGAAGGAGAAGTCACTTTGGGAATaGAGGTTGCTAAAGTCTCTTTGGGAGTTGCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: ESFVGKEKSLWE*RLLKSLWELQL Trigger: CAGCTGCAACTCCCAAAGAGACTTTAGCAACCTCAATTCCCAAAGTGACTTCTCCTTCCCCACAAAAGACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS CAA 90 bp | GAAAAAGAAATCTCAGCTAAGGGAGGATCAGGAAAGGGCACAGACTaGGGAATTTCAGGGGACAATGCCAAAGCAGTCTCAGAAACAGAA | + |
|
Preference number: 6 (lower is better) Translates to: EKEISAKGGSGKGTD*GISGDNAKAVSETE Trigger: TTCTGTTTCTGAGACTGCTTTGGCATTGTCCCCTGAAATTCCCAAGTCTGTGCCCTTTCCTGATCCTCCCTTAGCTGAGATTTCTTTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS CAA 90 bp | GAGAGGAGCCTGAAGACTCCATATGAGAGACAGCATCAACTTTCCTaGCATTGGAAAAAGAAATCTCAGCTAAGGGAGGATCAGGAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: ERSLKTPYERQHQLS*HWKKKSQLREDQER Trigger: CCTTTCCTGATCCTCCCTTAGCTGAGATTTCTTTTTCCAATGCAAGGAAAGTTGATGCTGTCTCTCATATGGAGTCTTCAGGCTCCTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS CCA 72 bp | GTCACGTCTGACATAATAGGGTCTACTTTAGGAGACTaGACTGCTGAGATCAGTCTGGAAGCTGTAACTTCT | + |
|
Preference number: 6 (lower is better) Translates to: VTSDIIGSTLGD*TAEISLEAVTS Trigger: AGAAGTTACAGCTTCCAGACTGATCTCAGCAGTCCAGTCTCCTAAAGTAGACCCTATTATGTCAGACGTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS CAA 72 bp | AGCGTTTCTTTAGGACTTGCCATTTTGGAAGTCTTTTaGGAAGATATGGGAATTTCTAGAGGTGCAGCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: SVSLGLAILEVF*EDMGISRGAAV Trigger: AACAGCTGCACCTCTAGAAATTCCCATATCTTCCAAAAAGACTTCCAAAATGGCAAGTCCTAAAGAAACGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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| CDS CAA 72 bp | GATGGGGTTACTAGCGTTTCTTTAGGACTTGCCATTTaGGAAGTCTTTTTGGAAGATATGGGAATTTCTAGA | + |
|
Preference number: 6 (lower is better) Translates to: DGVTSVSLGLAI*EVFLEDMGISR Trigger: TCTAGAAATTCCCATATCTTCCAAAAAGACTTCCAAAATGGCAAGTCCTAAAGAAACGCTAGTAACCCCATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092048.13 |
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