Pregenerated sensors for NABP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026107Ensembl transcript IDs: ENSMUST00000027279.12, ENSMUST00000185534.2, ENSMUST00000186003.7, ENSMUST00000186684.7, ENSMUST00000188051.7, ENSMUST00000188204.7, ENSMUST00000189542.7, ENSMUST00000190103.7
Found 149 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTTAGGGAGAAGACTCAAGAGCACCTGCTGCTCTTACAGAAAGCCTaGGTTCAATTCCCAGCACCCAAATGGCGGCTCACAAATATCTCA | + |
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Preference number: 1 (lower is better) Translates to: VREKTQEHLLLLQKA*VQFPAPKWRLTNIS Trigger: TGAGATATTTGTGAGCCGCCATTTGGGTGCTGGGAATTGAACGCAGGCTTTCTGTAAGAGCAGCAGGTGCTCTTGAGTCTTCTCCCTAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186003.7 ENSMUST00000189542.7 |
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| 3UTR TCA 90 bp | AACGTCAATGCTTCCAACCCCACTTTGACATTTCATCTTTTTCATTaGGCTGACAGAAGACACAAACATCCACTTCCTGGGCTAAGCCAC | + |
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Preference number: 1 (lower is better) Translates to: NVNASNPTLTFHLFH*ADRRHKHPLPGLSH Trigger: GTGGCTTAGCCCAGGAAGTGGATGTTTGTGTCTTCTGTCAGCTCAATGAAAAAGATGAAATGTCAAAGTGGGGTTGGAAGCATTGACGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000186003.7 ENSMUST00000189542.7 |
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| 3UTR GCA 90 bp | ACGAGTCACACACAACCTAAATTGGCTTCAAGCAAACAGCCATTATaGTCACTAGCATACCTAATAGGGGAAGCATTTCAGCAACTCCAC | + |
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Preference number: 1 (lower is better) Translates to: TSHTQPKLASSKQPL*SLAYLIGEAFQQLH Trigger: GTGGAGTTGCTGAAATGCTTCCCCTATTAGGTATGCTAGTGAGCATAATGGCTGTTTGCTTGAAGCCAATTTAGGTTGTGTGTGACTCGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186003.7 ENSMUST00000189542.7 |
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| 3UTR CCA 90 bp | TTCAGCCTTTGGGCATTTAGACTTTACATTTTACTTTCTATCCTGTaGCAACTCCCTGTGAACCTGGCCAGAAAAATAAGGGACAAGGCT | + |
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Preference number: 1 (lower is better) Translates to: FSLWAFRLYILLSIL*QLPVNLARKIRDKA Trigger: AGCCTTGTCCCTTATTTTTCTGGCCAGGTTCACAGGGAGTTGCCACAGGATAGAAAGTAAAATGTAAAGTCTAAATGCCCAAAGGCTGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000186003.7 ENSMUST00000189542.7 ENSMUST00000190103.7 |
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| 3UTR TCA 90 bp | TCCAGGAAGAGAGAGGCAGGTCAATCTATAGTTCAGAGACCCACCTaGTATATATATATATATAACAAGTTCCAACCAACCAGGGCTGCA | + |
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Preference number: 1 (lower is better) Translates to: SRKREAGQSIVQRPT*YIYIYNKFQPTRAA Trigger: TGCAGCCCTGGTTGGTTGGAACTTGTTATATATATATATATATCAGGTGGGTCTCTGAACTATAGATTGACCTGCCTCTCTCTTCCTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027279.12 ENSMUST00000186684.7 ENSMUST00000190103.7 |
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| 3UTR TCA 90 bp | GTGTGCTGTGTGCATTCAGTAACGTCAATGCTTCCAACCCCACTTTaGCATTTCATCTTTTTCATTGAGCTGACAGAAGACACAAACATC | + |
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Preference number: 1 (lower is better) Translates to: VCCVHSVTSMLPTPL*HFIFFIELTEDTNI Trigger: GATGTTTGTGTCTTCTGTCAGCTCAATGAAAAAGATGAAATGTCAAAGTGGGGTTGGAAGCATTGACGTTACTGAATGCACACAGCACAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000186003.7 ENSMUST00000189542.7 |
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| 3UTR GCA 90 bp | CAAAGCCCTGTACCTATAAACCAAATTCCTTGTGACTTCTCAAAATaGTATGATAATCTCCACACAGAGCCTAATGCAGTGCTTACTGAA | + |
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Preference number: 1 (lower is better) Translates to: QSPVPINQIPCDFSK*YDNLHTEPNAVLTE Trigger: TTCAGTAAGCACTGCATTAGGCTCTGTGTGGAGATTATCATAGCATTTTGAGAAGTCACAAGGAATTTGGTTTATAGGTACAGGGCTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027279.12 |
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| 3UTR TCA 90 bp | CAAGTTCTAAGTTCCCTTCCAGATAAGAGTGGCAATCCACCCTTCTaGAAAGCTTCATGTATGGGACTTAAAACCAGATTTTCAAGATTA | + |
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Preference number: 1 (lower is better) Translates to: QVLSSLPDKSGNPPF*KASCMGLKTRFSRL Trigger: TAATCTTGAAAATCTGGTTTTAAGTCCCATACATGAAGCTTTTCAGAAGGGTGGATTGCCACTCTTATCTGGAAGGGAACTTAGAACTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186003.7 ENSMUST00000189542.7 |
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| 3UTR GCA 90 bp | AAAATGTTGACAATGCTGTCCAAGTTTCTGGCTTGGGGTGGTTATTaGTTCAGGTGGCAATATTCAAGTTTAAGACAAGTTCCATTAAAC | + |
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Preference number: 1 (lower is better) Translates to: KMLTMLSKFLAWGGY*FRWQYSSLRQVPLN Trigger: GTTTAATGGAACTTGTCTTAAACTTGAATATTGCCACCTGAAGCAATAACCACCCCAAGCCAGAAACTTGGACAGCATTGTCAACATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027279.12 ENSMUST00000186684.7 ENSMUST00000190103.7 |
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| 3UTR GCA 90 bp | GGGGCTAATTATTTCTACTCAGAAACACTTGCTTCAGTTACTCTGTaGTTTGGACATTCTTCTAGTACATTTTCCACTGCTCAACACAAT | + |
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Preference number: 1 (lower is better) Translates to: GANYFYSETLASVTL*FGHSSSTFSTAQHN Trigger: ATTGTGTTGAGCAGTGGAAAATGTACTAGAAGAATGTCCAAAGCACAGAGTAACTGAAGCAAGTGTTTCTGAGTAGAAATAATTAGCCCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186003.7 ENSMUST00000189542.7 |
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| 3UTR TCA 90 bp | AGAAGTGCATTTCTATATTATGTTTTGTGTTTCACTGGGTCTTATTaGAATTTGTCATCGTTGATAACTGAAGACACCAGAGAGGAGGAA | + |
|
Preference number: 1 (lower is better) Translates to: RSAFLYYVLCFTGSY*NLSSLITEDTREEE Trigger: TTCCTCCTCTCTGGTGTCTTCAGTTATCAACGATGACAAATTTCAATAAGACCCAGTGAAACACAAAACATAATATAGAAATGCACTTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000186003.7 ENSMUST00000189542.7 ENSMUST00000190103.7 |
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| 3UTR CAA 90 bp | GCTTTAAACAAAGAGAGGCAAGACCTCAGTGAGGTCAGAGCTAGCTaGGCACATGCCTGTTTGGGAAAGTGTTTCCAGTGCTTTTCACAG | + |
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Preference number: 2 (lower is better) Translates to: ALNKERQDLSEVRAS*AHACLGKCFQCFSQ Trigger: CTGTGAAAAGCACTGGAAACACTTTCCCAAACAGGCATGTGCCAAGCTAGCTCTGACCTCACTGAGGTCTTGCCTCTCTTTGTTTAAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186003.7 ENSMUST00000189542.7 |
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| 3UTR-3UTR CCA 90 bp | AAGAGCACCTGCTGCTCTTACAGAAAGCCTGCGTTCAATTCCCAGCACCCAAATTACAACCATGAGATGTaGGGCTGTTTAATCACTCCC | + |
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Preference number: 2 (lower is better) Translates to: KSTCCSYRKPAFNSQHPNYNHEM*GCLITP Trigger: GGGAGTGATTAAACAGCCCCACATCTCATGGTTGTA...ATTTGGGTGCTGGGAATTGAACGCAGGCTTTCTGTAAGAGCAGCAGGTGCTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186003.7 ENSMUST00000189542.7 |
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| 3UTR-3UTR TCA 90 bp | TCCACTTCCTGGGCTAAGCCACAGAACATAATGGTCAGGGTGGAAAAGATACAAGGACAGGTTTTCAAGTaGTACCCAGTAAGTTCTTGC | + |
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Preference number: 2 (lower is better) Translates to: STSWAKPQNIMVRVEKIQGQVFK*YPVSSC Trigger: GCAAGAACTTACTGGGTATCACTTGAAAACCTGTCC...TTGTATCTTTTCCACCCTGACCATTATGTTCTGTGGCTTAGCCCAGGAAGTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186003.7 ENSMUST00000189542.7 |
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| 3UTR-3UTR TCA 90 bp | AATGCTGTCCAAGTTTCTGGCTTGGGGTGGTTATTGCTTCAGGTGGCAATATTCGGACAGGTTTTCAAGTaGTACCCAGTAAGTTCTTGC | + |
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Preference number: 2 (lower is better) Translates to: NAVQVSGLGWLLLQVAIFGQVFK*YPVSSC Trigger: GCAAGAACTTACTGGGTATCACTTGAAAACCTGTCC...GAATATTGCCACCTGAAGCAATAACCACCCCAAGCCAGAAACTTGGACAGCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027279.12 ENSMUST00000186684.7 ENSMUST00000188204.7 ENSMUST00000190103.7 |
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| 3UTR-3UTR TCA 90 bp | TATACACTGGCTCAGATTCCTCAAATAGTGCTTTATCCTCTGATAGACTCACAGTATGCTGCCCTTTTCTaGCCTCCACAGTCACCAGGA | + |
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Preference number: 2 (lower is better) Translates to: YTLAQIPQIVLYPLIDSQYAALF*PPQSPG Trigger: TCCTGGTGACTGTGGAGGTCAGAAAAGGGCAGCATA...CTGTGAGTCTATCAGAGGATAAAGCACTATTTGAGGAATCTGAGCCAGTGTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189542.7 |
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| 3UTR-3UTR CCA 90 bp | GAGTTAGGGAGCAGTCAAGCTGAAGATGAATACAACTTCAGTAAAATGGACTGGGTTTCTGGCTTGGGGTaGTTATTGCTTCAGGTGGCA | + |
|
Preference number: 2 (lower is better) Translates to: ELGSSQAEDEYNFSKMDWVSGLG*LLLQVA Trigger: TGCCACCTGAAGCAATAACCACCCCAAGCCAGAAAC...CCAGTCCATTTTACTGAAGTTGTATTCATCTTCAGCTTGACTGCTCCCTAACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027279.12 ENSMUST00000186684.7 ENSMUST00000190103.7 |
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| 3UTR-3UTR CCA 90 bp | GACTTTCTCCACCTTAAACTGGCTAAACCAGATTCAGCCACAGAAACTACACAGTGGCACATGCCTGTTTaGGAAAGTGTTTCCAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: DFLHLKLAKPDSATETTQWHMPV*ESVSSA Trigger: AGCACTGGAAACACTTTCCCAAACAGGCATGTGCCA...CTGTGTAGTTTCTGTGGCTGAATCTGGTTTAGCCAGTTTAAGGTGGAGAAAGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186003.7 ENSMUST00000189542.7 |
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| 3UTR-3UTR CCA 90 bp | TCCACTTCCTGGGCTAAGCCACAGAACATAATGGTCAGGGTGGAAAAGATACAATACAACCATGAGATGTaGGGCTGTTTAATCACTCCC | + |
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Preference number: 2 (lower is better) Translates to: STSWAKPQNIMVRVEKIQYNHEM*GCLITP Trigger: GGGAGTGATTAAACAGCCCCACATCTCATGGTTGTA...TTGTATCTTTTCCACCCTGACCATTATGTTCTGTGGCTTAGCCCAGGAAGTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186003.7 ENSMUST00000189542.7 |
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| 3UTR-3UTR TCA 90 bp | GACTTTCTCCACCTTAAACTGGCTAAACCAGATTCAGCCACAGAAACTACACAGTGCCTAAGGTGGGATTaGAATCTGAAGATGTGTGCT | + |
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Preference number: 2 (lower is better) Translates to: DFLHLKLAKPDSATETTQCLRWD*NLKMCA Trigger: AGCACACATCTTCAGATTTCAATCCCACCTTAGGCA...CTGTGTAGTTTCTGTGGCTGAATCTGGTTTAGCCAGTTTAAGGTGGAGAAAGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186003.7 ENSMUST00000189542.7 |
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| 3UTR-3UTR GCA 90 bp | GTTGACAATGCTGTCCAAGTTTCTGGCTTGGGGTGGTTATTGCTTCAGGTGGCAACATTACAAAGTTTATaGAGAAGCCAGACTCACAGA | + |
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Preference number: 2 (lower is better) Translates to: VDNAVQVSGLGWLLLQVATLQSL*RSQTHR Trigger: TCTGTGAGTCTGGCTTCTGCATAAACTTTGTAATGT...TGCCACCTGAAGCAATAACCACCCCAAGCCAGAAACTTGGACAGCATTGTCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027279.12 ENSMUST00000186684.7 ENSMUST00000190103.7 |
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| 3UTR-3UTR GCA 90 bp | CAGCTCCAGGAAGAGAGAGGCAGGTCAATCTATAGTTCAGAGACCCACCTGATAACATTACAAAGTTTATaGAGAAGCCAGACTCACAGA | + |
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Preference number: 2 (lower is better) Translates to: QLQEERGRSIYSSETHLITLQSL*RSQTHR Trigger: TCTGTGAGTCTGGCTTCTGCATAAACTTTGTAATGT...TATCAGGTGGGTCTCTGAACTATAGATTGACCTGCCTCTCTCTTCCTGGAGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027279.12 ENSMUST00000186684.7 ENSMUST00000190103.7 |
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| 3UTR-3UTR CCA 90 bp | GACCCTGCCTCAAAAATACAACTAGTATCAATGAGACCACTGTCCAATAAAGGTGTTTCTGGCTTGGGGTaGTTATTGCTTCAGGTGGCA | + |
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Preference number: 2 (lower is better) Translates to: DPASKIQLVSMRPLSNKGVSGLG*LLLQVA Trigger: TGCCACCTGAAGCAATAACCACCCCAAGCCAGAAAC...ACCTTTATTGGACAGTGGTCTCATTGATACTAGTTGTATTTTTGAGGCAGGGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027279.12 ENSMUST00000186684.7 ENSMUST00000190103.7 |
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| 3UTR-3UTR CCA 90 bp | AAGAGCACCTGCTGCTCTTACAGAAAGCCTGCGTTCAATTCCCAGCACCCAAATGCAAACTTCAGCCTTTaGGCATTTAGACTTTACATT | + |
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Preference number: 2 (lower is better) Translates to: KSTCCSYRKPAFNSQHPNANFSL*AFRLYI Trigger: AATGTAAAGTCTAAATGCCCAAAGGCTGAAGTTTGC...ATTTGGGTGCTGGGAATTGAACGCAGGCTTTCTGTAAGAGCAGCAGGTGCTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186003.7 ENSMUST00000189542.7 |
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| 3UTR-3UTR TCA 90 bp | CCTCCTTGTAAAAGAGAGACAGCAAGAACAGTAGACAAAGCTCTCCAGAGTGTTGGGACAAGGCTAGTCTaGTCATGTGTTTGTTCTAAT | + |
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Preference number: 2 (lower is better) Translates to: PPCKRETARTVDKALQSVGTRLV*SCVCSN Trigger: ATTAGAACAAACACATGATCAGACTAGCCTTGTCCC...AACACTCTGGAGAGCTTTGTCTACTGTTCTTGCTGTCTCTCTTTTACAAGGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186003.7 ENSMUST00000189542.7 |
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| 3UTR-3UTR GCA 90 bp | ATGTTGACAATGCTGTCCAAGTTTCTGGCTTGGGGTGGTTATTGCTTCAGGTGGACATTACAAAGTTTATaGAGAAGCCAGACTCACAGA | + |
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Preference number: 2 (lower is better) Translates to: MLTMLSKFLAWGGYCFRWTLQSL*RSQTHR Trigger: TCTGTGAGTCTGGCTTCTGCATAAACTTTGTAATGT...CCACCTGAAGCAATAACCACCCCAAGCCAGAAACTTGGACAGCATTGTCAACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027279.12 ENSMUST00000186684.7 ENSMUST00000190103.7 |
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| 3UTR-3UTR GCA 90 bp | GAGTTAGGGAGCAGTCAAGCTGAAGATGAATACAACTTCAGTAAAATGGACTGGCTGGAAGAAAGGAAATaGCTACTTCTACCCGACTAC | + |
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Preference number: 2 (lower is better) Translates to: ELGSSQAEDEYNFSKMDWLEERK*LLLPDY Trigger: GTAGTCGGGTAGAAGTAGGCATTTCCTTTCTTCCAG...CCAGTCCATTTTACTGAAGTTGTATTCATCTTCAGCTTGACTGCTCCCTAACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027279.12 ENSMUST00000186684.7 ENSMUST00000190103.7 |
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| 3UTR-3UTR GCA 90 bp | GACTTTCTCCACCTTAAACTGGCTAAACCAGATTCAGCCACAGAAACTACACAGTCTAATCCAGAACTGTaGCTAGAAACAGTAATGGGG | + |
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Preference number: 2 (lower is better) Translates to: DFLHLKLAKPDSATETTQSNPEL*LETVMG Trigger: CCCCATTACTGTTTCTAGGCACAGTTCTGGATTAGA...CTGTGTAGTTTCTGTGGCTGAATCTGGTTTAGCCAGTTTAAGGTGGAGAAAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186003.7 ENSMUST00000189542.7 |
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| 3UTR-3UTR GCA 90 bp | TCCACTTCCTGGGCTAAGCCACAGAACATAATGGTCAGGGTGGAAAAGATACAAACAAGGATCTCATCATaGCCAAGTATCTCTCTGTAT | + |
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Preference number: 2 (lower is better) Translates to: STSWAKPQNIMVRVEKIQTRISS*PSISLY Trigger: ATACAGAGAGATACTTGGGCATGATGAGATCCTTGT...TTGTATCTTTTCCACCCTGACCATTATGTTCTGTGGCTTAGCCCAGGAAGTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186003.7 ENSMUST00000189542.7 |
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| 3UTR-3UTR CCA 90 bp | AAGAGCACCTGCTGCTCTTACAGAAAGCCTGCGTTCAATTCCCAGCACCCAAATATCTACCACTTTCATTaGGTAAGAGAAAGAGAACTA | + |
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Preference number: 2 (lower is better) Translates to: KSTCCSYRKPAFNSQHPNIYHFH*VREREL Trigger: TAGTTCTCTTTCTCTTACCCAATGAAAGTGGTAGAT...ATTTGGGTGCTGGGAATTGAACGCAGGCTTTCTGTAAGAGCAGCAGGTGCTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186003.7 ENSMUST00000189542.7 |
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| 3UTR-3UTR TCA 90 bp | GACCCTGCCTCAAAAATACAACTAGTATCAATGAGACCACTGTCCAATAAAGGTGGACAGGTTTTCAAGTaGTACCCAGTAAGTTCTTGC | + |
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Preference number: 2 (lower is better) Translates to: DPASKIQLVSMRPLSNKGGQVFK*YPVSSC Trigger: GCAAGAACTTACTGGGTATCACTTGAAAACCTGTCC...ACCTTTATTGGACAGTGGTCTCATTGATACTAGTTGTATTTTTGAGGCAGGGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027279.12 ENSMUST00000186684.7 ENSMUST00000190103.7 |
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| 3UTR-3UTR GCA 90 bp | GATTCCTCAAATAGTGCTTTATCCTCTGATAGACTCACAGCCATGAAGCTAGTACTCCAGCCCCAGCTTTaGTCTTCTAATTTCTGTGAT | + |
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Preference number: 2 (lower is better) Translates to: DSSNSALSSDRLTAMKLVLQPQL*SSNFCD Trigger: ATCACAGAAATTAGAAGAGCAAAGCTGGGGCTGGAG...TACTAGCTTCATGGCTGTGAGTCTATCAGAGGATAAAGCACTATTTGAGGAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189542.7 |
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| 3UTR-3UTR GCA 90 bp | CATGAAGCTAGTACAATAACAGATACAGGACTCAAATCAAGATCTTTCCAGCTCCAGTTGCAAGGTATATaGTGCCCTTTTCTGACCTCC | + |
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Preference number: 2 (lower is better) Translates to: HEASTITDTGLKSRSFQLQLQGI*CPFLTS Trigger: GGAGGTCAGAAAAGGGCAGCATATACCTTGCAACTG...GAGCTGGAAAGATCTTGATTTGAGTCCTGTATCTGTTATTGTACTAGCTTCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189542.7 |
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| 3UTR-3UTR CCA 90 bp | GACTTTCTCCACCTTAAACTGGCTAAACCAGATTCAGCCACAGAAACTACACAGACAACTTCAGTAAAATaGACTGGGCTCTCCATGTTT | + |
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Preference number: 2 (lower is better) Translates to: DFLHLKLAKPDSATETTQTTSVK*TGLSMF Trigger: AAACATGGAGAGCCCAGTCCATTTTACTGAAGTTGT...CTGTGTAGTTTCTGTGGCTGAATCTGGTTTAGCCAGTTTAAGGTGGAGAAAGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186003.7 ENSMUST00000189542.7 |
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| 3UTR-3UTR CCA 90 bp | TCCACTTCCTGGGCTAAGCCACAGAACATAATGGTCAGGGTGGAAAAGATACAAGGTATCCAAGCAGACTaGAAAGGCAATTATTCATTA | + |
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Preference number: 2 (lower is better) Translates to: STSWAKPQNIMVRVEKIQGIQAD*KGNYSL Trigger: TAATGAATAATTGCCTTTCCAGTCTGCTTGGATACC...TTGTATCTTTTCCACCCTGACCATTATGTTCTGTGGCTTAGCCCAGGAAGTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186003.7 ENSMUST00000189542.7 |
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| 3UTR-3UTR GCA 90 bp | GAGTTAGGGAGCAGTCAAGCTGAAGATGAATACAACTTCAGTAAAATGGACTGGGGAAAGTGTTTCCAGTaGTTTTCACAGTCATCAGAA | + |
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Preference number: 2 (lower is better) Translates to: ELGSSQAEDEYNFSKMDWGKCFQ*FSQSSE Trigger: TTCTGATGACTGTGAAAAGCACTGGAAACACTTTCC...CCAGTCCATTTTACTGAAGTTGTATTCATCTTCAGCTTGACTGCTCCCTAACTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000186003.7 ENSMUST00000189542.7 |
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| 3UTR-3UTR GCA 90 bp | CAGTATGGGTGTGTCAATAAATCTGCCGAACTAGGCTACTACAGAACAACAAAGACAAGGATCTCATCATaGCCAAGTATCTCTCTGTAT | + |
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Preference number: 2 (lower is better) Translates to: QYGCVNKSAELGYYRTTKTRISS*PSISLY Trigger: ATACAGAGAGATACTTGGGCATGATGAGATCCTTGT...CTTTGTTGTTCTGTAGTAGCCTAGTTCGGCAGATTTATTGACACACCCATACTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186003.7 ENSMUST00000189542.7 |
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| 3UTR-3UTR CCA 90 bp | GAGTTAGGGAGCAGTCAAGCTGAAGATGAATACAACTTCAGTAAAATGGACTGGAAACACACACATTCCTaGAAGAAAGGAAATGCCTAC | + |
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Preference number: 2 (lower is better) Translates to: ELGSSQAEDEYNFSKMDWKHTHS*KKGNAY Trigger: GTAGGCATTTCCTTTCTTCCAGGAATGTGTGTGTTT...CCAGTCCATTTTACTGAAGTTGTATTCATCTTCAGCTTGACTGCTCCCTAACTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027279.12 ENSMUST00000186684.7 ENSMUST00000190103.7 |
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| 3UTR-3UTR CCA 90 bp | GACTTTCTCCACCTTAAACTGGCTAAACCAGATTCAGCCACAGAAACTACACAGGCAAACTTCAGCCTTTaGGCATTTAGACTTTACATT | + |
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Preference number: 2 (lower is better) Translates to: DFLHLKLAKPDSATETTQANFSL*AFRLYI Trigger: AATGTAAAGTCTAAATGCCCAAAGGCTGAAGTTTGC...CTGTGTAGTTTCTGTGGCTGAATCTGGTTTAGCCAGTTTAAGGTGGAGAAAGTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186003.7 ENSMUST00000189542.7 |
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| 3UTR-3UTR CCA 90 bp | CTGTATCTACCACTTTCATTGGGTAAGAGAAAGAGAACTAAGTATCAGGCTTTATGGCACATGCCTGTTTaGGAAAGTGTTTCCAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: LYLPLSLGKRKRTKYQALWHMPV*ESVSSA Trigger: AGCACTGGAAACACTTTCCCAAACAGGCATGTGCCA...TAAAGCCTGATACTTAGTTCTCTTTCTCTTACCCAATGAAAGTGGTAGATACAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186003.7 ENSMUST00000189542.7 |
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| 3UTR-3UTR CCA 90 bp | TCCACTTCCTGGGCTAAGCCACAGAACATAATGGTCAGGGTGGAAAAGATACAAAAACTTGGCATAATTTaGCTAAAGCTTTCTGATCCA | + |
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Preference number: 2 (lower is better) Translates to: STSWAKPQNIMVRVEKIQKLGII*LKLSDP Trigger: TGGATCAGAAAGCTTTAGCCAAATTATGCCAAGTTT...TTGTATCTTTTCCACCCTGACCATTATGTTCTGTGGCTTAGCCCAGGAAGTGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000186003.7 ENSMUST00000189542.7 |
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| 3UTR-3UTR CCA 90 bp | TATACACTGGCTCAGATTCCTCAAATAGTGCTTTATCCTCTGATAGACTCACAGTATTTCAAACTCATGTaGGAACTGTGCCTAAGGTGG | + |
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Preference number: 2 (lower is better) Translates to: YTLAQIPQIVLYPLIDSQYFKLM*ELCLRW Trigger: CCACCTTAGGCACAGTTCCCACATGAGTTTGAAATA...CTGTGAGTCTATCAGAGGATAAAGCACTATTTGAGGAATCTGAGCCAGTGTATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189542.7 |
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| 3UTR-3UTR CCA 90 bp | GTATTAGTACAGGTTAGGGAGAAGACTCAAGAGCACCTGCTGCTCTTACAGAAACACCAGGAACACATATaGTACACATCTAAACATTCA | + |
|
Preference number: 2 (lower is better) Translates to: VLVQVREKTQEHLLLLQKHQEHI*YTSKHS Trigger: TGAATGTTTAGATGTGTACCATATGTGTTCCTGGTG...TTTCTGTAAGAGCAGCAGGTGCTCTTGAGTCTTCTCCCTAACCTGTACTAATAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186003.7 ENSMUST00000189542.7 |
||
| 3UTR-3UTR TCA 90 bp | GACAAACATTACAAAGTTTATGCAGAAGCCAGACTCACAGAGGCTATATATAAGGGACAGGTTTTCAAGTaGTACCCAGTAAGTTCTTGC | + |
|
Preference number: 2 (lower is better) Translates to: DKHYKVYAEARLTEAIYKGQVFK*YPVSSC Trigger: GCAAGAACTTACTGGGTATCACTTGAAAACCTGTCC...CTTATATATAGCCTCTGTGAGTCTGGCTTCTGCATAAACTTTGTAATGTTTGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027279.12 ENSMUST00000186684.7 ENSMUST00000188204.7 ENSMUST00000190103.7 |
||
| 3UTR-3UTR GCA 90 bp | GATTCCTCAAATAGTGCTTTATCCTCTGATAGACTCACAGCCATGAAGCTAGTAGGAAAGTGTTTCCAGTaGTTTTCACAGTCATCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: DSSNSALSSDRLTAMKLVGKCFQ*FSQSSE Trigger: TTCTGATGACTGTGAAAAGCACTGGAAACACTTTCC...TACTAGCTTCATGGCTGTGAGTCTATCAGAGGATAAAGCACTATTTGAGGAATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189542.7 |
||
| 3UTR-3UTR CCA 90 bp | TGGGGACCCAATCCTAGAAGTGCATTTCTATATTATGTTTTGTGTTTCACTGGGACAACTTCAGTAAAATaGACTGGGCTCTCCATGTTT | + |
|
Preference number: 2 (lower is better) Translates to: WGPNPRSAFLYYVLCFTGTTSVK*TGLSMF Trigger: AAACATGGAGAGCCCAGTCCATTTTACTGAAGTTGT...CCCAGTGAAACACAAAACATAATATAGAAATGCACTTCTAGGATTGGGTCCCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000186003.7 ENSMUST00000189542.7 ENSMUST00000190103.7 |
||
| 3UTR CAA 90 bp | CACACATTCCTGGAAGAAAGGAAATGCCTACTTCTACCCGACTACTaGCAACTGGTAGTCACATGGCTATATGAATTTAATTTGATTTGT | + |
|
Preference number: 2 (lower is better) Translates to: HTFLEERKCLLLPDY*QLVVTWLYEFNLIC Trigger: ACAAATCAAATTAAATTCATATAGCCATGTGACTACCAGTTGCAAGTAGTCGGGTAGAAGTAGGCATTTCCTTTCTTCCAGGAATGTGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027279.12 ENSMUST00000186684.7 ENSMUST00000190103.7 |
||
| 3UTR-3UTR GCA 90 bp | CATGAAGCTAGTACAATAACAGATACAGGACTCAAATCAAGATCTTTCCAGCTCAAATCTGAAGATGTGTaGTGTGTGCATTCAGTAACG | + |
|
Preference number: 2 (lower is better) Translates to: HEASTITDTGLKSRSFQLKSEDV*CVHSVT Trigger: CGTTACTGAATGCACACAGCACACATCTTCAGATTT...GAGCTGGAAAGATCTTGATTTGAGTCCTGTATCTGTTATTGTACTAGCTTCATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189542.7 |
||
| 3UTR-3UTR CCA 90 bp | GACCCTGCCTCAAAAATACAACTAGTATCAATGAGACCACTGTCCAATAAAGGTGGTATCCAAGCAGACTaGAAAGGCAATTATTCATTA | + |
|
Preference number: 2 (lower is better) Translates to: DPASKIQLVSMRPLSNKGGIQAD*KGNYSL Trigger: TAATGAATAATTGCCTTTCCAGTCTGCTTGGATACC...ACCTTTATTGGACAGTGGTCTCATTGATACTAGTTGTATTTTTGAGGCAGGGTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000190103.7 |
||
| 3UTR-3UTR CCA 90 bp | TGGGGACCCAATCCTAGAAGTGCATTTCTATATTATGTTTTGTGTTTCACTGGGGCAAACTTCAGCCTTTaGGCATTTAGACTTTACATT | + |
|
Preference number: 2 (lower is better) Translates to: WGPNPRSAFLYYVLCFTGANFSL*AFRLYI Trigger: AATGTAAAGTCTAAATGCCCAAAGGCTGAAGTTTGC...CCCAGTGAAACACAAAACATAATATAGAAATGCACTTCTAGGATTGGGTCCCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000186003.7 ENSMUST00000189542.7 ENSMUST00000190103.7 |
||
| 3UTR-3UTR CCA 90 bp | CAGTATGGGTGTGTCAATAAATCTGCCGAACTAGGCTACTACAGAACAACAAAGATCTACCACTTTCATTaGGTAAGAGAAAGAGAACTA | + |
|
Preference number: 2 (lower is better) Translates to: QYGCVNKSAELGYYRTTKIYHFH*VREREL Trigger: TAGTTCTCTTTCTCTTACCCAATGAAAGTGGTAGAT...CTTTGTTGTTCTGTAGTAGCCTAGTTCGGCAGATTTATTGACACACCCATACTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186003.7 ENSMUST00000189542.7 |
||
| 3UTR-3UTR CCA 90 bp | CAGCACTCCTATGTAGAGGGGCTAATTATTTCTACTCAGAAACACTTGCTTCAGAAACTTGGCATAATTTaGCTAAAGCTTTCTGATCCA | + |
|
Preference number: 2 (lower is better) Translates to: QHSYVEGLIISTQKHLLQKLGII*LKLSDP Trigger: TGGATCAGAAAGCTTTAGCCAAATTATGCCAAGTTT...CTGAAGCAAGTGTTTCTGAGTAGAAATAATTAGCCCCTCTACATAGGAGTGCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186003.7 ENSMUST00000189542.7 |
||
| 3UTR-3UTR CCA 90 bp | CAGTATGGGTGTGTCAATAAATCTGCCGAACTAGGCTACTACAGAACAACAAAGCTTTTACTCTTCAAATaGCTAAAAGACCTACTGGTT | + |
|
Preference number: 2 (lower is better) Translates to: QYGCVNKSAELGYYRTTKLLLFK*LKDLLV Trigger: AACCAGTAGGTCTTTTAGCCATTTGAAGAGTAAAAG...CTTTGTTGTTCTGTAGTAGCCTAGTTCGGCAGATTTATTGACACACCCATACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186003.7 ENSMUST00000189542.7 |
||
| 3UTR-3UTR CCA 90 bp | GATTCCTCAAATAGTGCTTTATCCTCTGATAGACTCACAGCCATGAAGCTAGTACACCAGGAACACATATaGTACACATCTAAACATTCA | + |
|
Preference number: 2 (lower is better) Translates to: DSSNSALSSDRLTAMKLVHQEHI*YTSKHS Trigger: TGAATGTTTAGATGTGTACCATATGTGTTCCTGGTG...TACTAGCTTCATGGCTGTGAGTCTATCAGAGGATAAAGCACTATTTGAGGAATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189542.7 |
||
| 3UTR-3UTR CCA 90 bp | CATGAAGCTAGTACAATAACAGATACAGGACTCAAATCAAGATCTTTCCAGCTCGGTATCCAAGCAGACTaGAAAGGCAATTATTCATTA | + |
|
Preference number: 2 (lower is better) Translates to: HEASTITDTGLKSRSFQLGIQAD*KGNYSL Trigger: TAATGAATAATTGCCTTTCCAGTCTGCTTGGATACC...GAGCTGGAAAGATCTTGATTTGAGTCCTGTATCTGTTATTGTACTAGCTTCATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189542.7 |
||
| 3UTR GCA 72 bp | AAGACTCAAGAGCACCTGCTGCTCTTACAGAAAGCCTaGGTTCAATTCCCAGCACCCAAATGGCGGCTCACA | + |
|
Preference number: 3 (lower is better) Translates to: KTQEHLLLLQKA*VQFPAPKWRLT Trigger: TGTGAGCCGCCATTTGGGTGCTGGGAATTGAACGCAGGCTTTCTGTAAGAGCAGCAGGTGCTCTTGAGTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186003.7 ENSMUST00000189542.7 |
||
| 3UTR CCA 72 bp | AAGAGAGGCAAGACCTCAGTGAGGTCAGAGCTAGCTTaGCACATGCCTGTTTGGGAAAGTGTTTCCAGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: KRGKTSVRSELA*HMPVWESVSSA Trigger: AGCACTGGAAACACTTTCCCAAACAGGCATGTGCCAAGCTAGCTCTGACCTCACTGAGGTCTTGCCTCTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186003.7 ENSMUST00000189542.7 |
||
| 3UTR TCA 72 bp | CTCAACTCCAGTTGCAAGGTATATGCTGCCCTTTTCTaGCCTCCACAGTCACCAGGAACACATATGGTACAC | + |
|
Preference number: 3 (lower is better) Translates to: LNSSCKVYAALF*PPQSPGTHMVH Trigger: GTGTACCATATGTGTTCCTGGTGACTGTGGAGGTCAGAAAAGGGCAGCATATACCTTGCAACTGGAGTTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186003.7 ENSMUST00000189542.7 |
||
| 3UTR GCA 72 bp | AGCTTGGCACATGCCTGTTTGGGAAAGTGTTTCCAGTaGTTTTCACAGTCATCAGAACCTCACGAGTCACAC | + |
|
Preference number: 3 (lower is better) Translates to: SLAHACLGKCFQ*FSQSSEPHESH Trigger: GTGTGACTCGTGAGGTTCTGATGACTGTGAAAAGCACTGGAAACACTTTCCCAAACAGGCATGTGCCAAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186003.7 ENSMUST00000189542.7 |
||
| 3UTR-3UTR CAA 90 bp | GAGTTAGGGAGCAGTCAAGCTGAAGATGAATACAACTTCAGTAAAATGGACTGGGAGGTCAGAGCTAGCTaGGCACATGCCTGTTTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: ELGSSQAEDEYNFSKMDWEVRAS*AHACLG Trigger: TCCCAAACAGGCATGTGCCAAGCTAGCTCTGACCTC...CCAGTCCATTTTACTGAAGTTGTATTCATCTTCAGCTTGACTGCTCCCTAACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186003.7 ENSMUST00000189542.7 |
||
| 3UTR-3UTR CAA 90 bp | AAGAGCACCTGCTGCTCTTACAGAAAGCCTGCGTTCAATTCCCAGCACCCAAATAGCTCTCCAGAGTGTTaGATGCAAGTTCTAAGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: KSTCCSYRKPAFNSQHPNSSPEC*MQVLSS Trigger: GGAACTTAGAACTTGCATCAAACACTCTGGAGAGCT...ATTTGGGTGCTGGGAATTGAACGCAGGCTTTCTGTAAGAGCAGCAGGTGCTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186003.7 ENSMUST00000189542.7 |
||
| 3UTR-3UTR CAA 90 bp | CAGCACTCCTATGTAGAGGGGCTAATTATTTCTACTCAGAAACACTTGCTTCAGTTGGCACATGCCTGTTaGGGAAAGTGTTTCCAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: QHSYVEGLIISTQKHLLQLAHAC*GKCFQC Trigger: GCACTGGAAACACTTTCCCAAACAGGCATGTGCCAA...CTGAAGCAAGTGTTTCTGAGTAGAAATAATTAGCCCCTCTACATAGGAGTGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186003.7 ENSMUST00000189542.7 |
||
| 3UTR-3UTR CAA 90 bp | GACTTTCTCCACCTTAAACTGGCTAAACCAGATTCAGCCACAGAAACTACACAGGTGCCTAAGGTGGGATaGAAATCTGAAGATGTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: DFLHLKLAKPDSATETTQVPKVG*KSEDVC Trigger: GCACACATCTTCAGATTTCAATCCCACCTTAGGCAC...CTGTGTAGTTTCTGTGGCTGAATCTGGTTTAGCCAGTTTAAGGTGGAGAAAGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186003.7 ENSMUST00000189542.7 |
||
| 3UTR GCA 72 bp | TCACAAATATCTCAACTCCAGTTGCAAGGTATATGCTaGCCTTTTCTGACCTCCACAGTCACCAGGAACACA | + |
|
Preference number: 3 (lower is better) Translates to: SQISQLQLQGIC*PFLTSTVTRNT Trigger: TGTGTTCCTGGTGACTGTGGAGGTCAGAAAAGGGCAGCATATACCTTGCAACTGGAGTTGAGATATTTGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186003.7 ENSMUST00000189542.7 |
||
| 3UTR CCA 72 bp | GCAGTCAAGCTGAAGATGAATACAACTTCAGTAAAATaGACTGGGCTCTCCATGTTTACCTCGAAACAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: AVKLKMNTTSVK*TGLSMFTSKQG Trigger: TCCCTGTTTCGAGGTAAACATGGAGAGCCCAGTCCATTTTACTGAAGTTGTATTCATCTTCAGCTTGACTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186003.7 ENSMUST00000189542.7 |
||
| 3UTR-3UTR CAA 90 bp | ATTATTTCTACTCAGAAACACTTGCTTCAGTTACTCTGTGCTTTGGACATTCTTGAGGTCAGAGCTAGCTaGGCACATGCCTGTTTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: IISTQKHLLQLLCALDILEVRAS*AHACLG Trigger: TCCCAAACAGGCATGTGCCAAGCTAGCTCTGACCTC...AAGAATGTCCAAAGCACAGAGTAACTGAAGCAAGTGTTTCTGAGTAGAAATAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186003.7 ENSMUST00000189542.7 |
||
| 3UTR-3UTR CAA 90 bp | TCCACTTCCTGGGCTAAGCCACAGAACATAATGGTCAGGGTGGAAAAGATACAACAGTTACTCTGTGCTTaGGACATTCTTCTAGTACAT | + |
|
Preference number: 3 (lower is better) Translates to: STSWAKPQNIMVRVEKIQQLLCA*DILLVH Trigger: ATGTACTAGAAGAATGTCCAAAGCACAGAGTAACTG...TTGTATCTTTTCCACCCTGACCATTATGTTCTGTGGCTTAGCCCAGGAAGTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186003.7 ENSMUST00000189542.7 |
||
| 3UTR-3UTR CAA 90 bp | TATACACTGGCTCAGATTCCTCAAATAGTGCTTTATCCTCTGATAGACTCACAGAGCTCTCCAGAGTGTTaGATGCAAGTTCTAAGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: YTLAQIPQIVLYPLIDSQSSPEC*MQVLSS Trigger: GGAACTTAGAACTTGCATCAAACACTCTGGAGAGCT...CTGTGAGTCTATCAGAGGATAAAGCACTATTTGAGGAATCTGAGCCAGTGTATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189542.7 |
||
| 3UTR-3UTR CAA 90 bp | GTATTAGTACAGGTTAGGGAGAAGACTCAAGAGCACCTGCTGCTCTTACAGAAACAGTTACTCTGTGCTTaGGACATTCTTCTAGTACAT | + |
|
Preference number: 3 (lower is better) Translates to: VLVQVREKTQEHLLLLQKQLLCA*DILLVH Trigger: ATGTACTAGAAGAATGTCCAAAGCACAGAGTAACTG...TTTCTGTAAGAGCAGCAGGTGCTCTTGAGTCTTCTCCCTAACCTGTACTAATAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186003.7 ENSMUST00000189542.7 |
||
| 3UTR TCA 72 bp | AGTTCCCTTCCAGATAAGAGTGGCAATCCACCCTTCTaGAAAGCTTCATGTATGGGACTTAAAACCAGATTT | + |
|
Preference number: 3 (lower is better) Translates to: SSLPDKSGNPPF*KASCMGLKTRF Trigger: AAATCTGGTTTTAAGTCCCATACATGAAGCTTTTCAGAAGGGTGGATTGCCACTCTTATCTGGAAGGGAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186003.7 ENSMUST00000189542.7 |
||
| 3UTR TCA 72 bp | GTGCATTCAGTAACGTCAATGCTTCCAACCCCACTTTaGCATTTCATCTTTTTCATTGAGCTGACAGAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: VHSVTSMLPTPL*HFIFFIELTED Trigger: GTCTTCTGTCAGCTCAATGAAAAAGATGAAATGTCAAAGTGGGGTTGGAAGCATTGACGTTACTGAATGCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000186003.7 ENSMUST00000189542.7 |
||
| 3UTR GCA 72 bp | ACAATGCTGTCCAAGTTTCTGGCTTGGGGTGGTTATTaGTTCAGGTGGCAATATTCAAGTTTAAGACAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: TMLSKFLAWGGY*FRWQYSSLRQV Trigger: AACTTGTCTTAAACTTGAATATTGCCACCTGAAGCAATAACCACCCCAAGCCAGAAACTTGGACAGCATTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027279.12 ENSMUST00000186684.7 ENSMUST00000188204.7 ENSMUST00000190103.7 |
||
| 3UTR GCA 72 bp | ACACAACCTAAATTGGCTTCAAGCAAACAGCCATTATaGTCACTAGCATACCTAATAGGGGAAGCATTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: TQPKLASSKQPL*SLAYLIGEAFQ Trigger: CTGAAATGCTTCCCCTATTAGGTATGCTAGTGAGCATAATGGCTGTTTGCTTGAAGCCAATTTAGGTTGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186003.7 ENSMUST00000189542.7 |
||
| 3UTR CCA 72 bp | TCAAAAATGTTGACAATGCTGTCCAAGTTTCTGGCTTaGGGTGGTTATTGCTTCAGGTGGCAATATTCAAGT | + |
|
Preference number: 3 (lower is better) Translates to: SKMLTMLSKFLA*GGYCFRWQYSS Trigger: ACTTGAATATTGCCACCTGAAGCAATAACCACCCCAAGCCAGAAACTTGGACAGCATTGTCAACATTTTTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027279.12 ENSMUST00000186684.7 ENSMUST00000190103.7 |
||
| 3UTR CCA 72 bp | CCCTTTTCTGACCTCCACAGTCACCAGGAACACATATaGTACACATCTAAACATTCAGGTAAAAGTCCATTT | + |
|
Preference number: 3 (lower is better) Translates to: PFSDLHSHQEHI*YTSKHSGKSPF Trigger: AAATGGACTTTTACCTGAATGTTTAGATGTGTACCATATGTGTTCCTGGTGACTGTGGAGGTCAGAAAAGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186003.7 ENSMUST00000189542.7 |
||
| 3UTR-3UTR CAA 90 bp | CCTCCTTGTAAAAGAGAGACAGCAAGAACAGTAGACAAAGCTCTCCAGAGTGTTTTTTTCAGTAACTTCTaGATGAGTGGTATCCAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: PPCKRETARTVDKALQSVFFSNF*MSGIQA Trigger: TGCTTGGATACCACTCATCAAGAAGTTACTGAAAAA...AACACTCTGGAGAGCTTTGTCTACTGTTCTTGCTGTCTCTCTTTTACAAGGAGG 41% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000186003.7 ENSMUST00000189542.7 |
||
| 3UTR-3UTR CAA 90 bp | ATTATTTCTACTCAGAAACACTTGCTTCAGTTACTCTGTGCTTTGGACATTCTTTTGGCACATGCCTGTTaGGGAAAGTGTTTCCAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: IISTQKHLLQLLCALDILLAHAC*GKCFQC Trigger: GCACTGGAAACACTTTCCCAAACAGGCATGTGCCAA...AAGAATGTCCAAAGCACAGAGTAACTGAAGCAAGTGTTTCTGAGTAGAAATAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186003.7 ENSMUST00000189542.7 |
||
| 3UTR-3UTR CAA 90 bp | GACTTTCTCCACCTTAAACTGGCTAAACCAGATTCAGCCACAGAAACTACACAGTATCTACCACTTTCATaGGGTAAGAGAAAGAGAACT | + |
|
Preference number: 3 (lower is better) Translates to: DFLHLKLAKPDSATETTQYLPLS*GKRKRT Trigger: AGTTCTCTTTCTCTTACCCAATGAAAGTGGTAGATA...CTGTGTAGTTTCTGTGGCTGAATCTGGTTTAGCCAGTTTAAGGTGGAGAAAGTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186003.7 ENSMUST00000189542.7 |
||
| 3UTR TCA 72 bp | CACTGGGTCTTATTGAAATTTGTCATCGTTGATAACTaGAGACACCAGAGAGGAGGAAGGTTGACACTTTTT | + |
|
Preference number: 3 (lower is better) Translates to: HWVLLKFVIVDN*RHQRGGRLTLF Trigger: AAAAAGTGTCAACCTTCCTCCTCTCTGGTGTCTTCAGTTATCAACGATGACAAATTTCAATAAGACCCAGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000186003.7 ENSMUST00000189542.7 ENSMUST00000190103.7 |
||
| 3UTR CCA 72 bp | TCCAAGTTTCTGGCTTGGGGTGGTTATTGCTTCAGGTaGCAATATTCAAGTTTAAGACAAGTTCCATTAAAC | + |
|
Preference number: 3 (lower is better) Translates to: SKFLAWGGYCFR*QYSSLRQVPLN Trigger: GTTTAATGGAACTTGTCTTAAACTTGAATATTGCCACCTGAAGCAATAACCACCCCAAGCCAGAAACTTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027279.12 ENSMUST00000186684.7 ENSMUST00000188204.7 ENSMUST00000190103.7 |
||
| 3UTR GCA 72 bp | GTACCTATAAACCAAATTCCTTGTGACTTCTCAAAATaGTATGATAATCTCCACACAGAGCCTAATGCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: VPINQIPCDFSK*YDNLHTEPNAV Trigger: CACTGCATTAGGCTCTGTGTGGAGATTATCATAGCATTTTGAGAAGTCACAAGGAATTTGGTTTATAGGTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027279.12 |
||
| 3UTR CCA 72 bp | GATTACTCCATCGTTTGTGAACAAGCTGTCCTAGCTTaGATCCAGATGTTTTTAATCTTAGAAGGCATAGAA | + |
|
Preference number: 3 (lower is better) Translates to: DYSIVCEQAVLA*IQMFLILEGIE Trigger: TTCTATGCCTTCTAAGATTAAAAACATCTGGATCCAAGCTAGGACAGCTTGTTCACAAACGATGGAGTAATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000186003.7 ENSMUST00000189542.7 |
||
| 3UTR TCA 72 bp | CTTAAAACCAGATTTTCAAGATTACTCCATCGTTTGTaGACAAGCTGTCCTAGCTTGGATCCAGATGTTTTT | + |
|
Preference number: 3 (lower is better) Translates to: LKTRFSRLLHRL*TSCPSLDPDVF Trigger: AAAAACATCTGGATCCAAGCTAGGACAGCTTGTTCACAAACGATGGAGTAATCTTGAAAATCTGGTTTTAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186003.7 ENSMUST00000189542.7 |
||
| 3UTR GCA 72 bp | TATTTCTACTCAGAAACACTTGCTTCAGTTACTCTGTaGTTTGGACATTCTTCTAGTACATTTTCCACTGCT | + |
|
Preference number: 3 (lower is better) Translates to: YFYSETLASVTL*FGHSSSTFSTA Trigger: AGCAGTGGAAAATGTACTAGAAGAATGTCCAAAGCACAGAGTAACTGAAGCAAGTGTTTCTGAGTAGAAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186003.7 ENSMUST00000189542.7 |
||
| CDS-3UTR CCA 90 bp | CAGCTCCAGGAAGAGAGAGGCAGGTCAATCTATAGTTCAGAGACCCACCTGATAGGCCGTCTTTGGTTTTaGTCACTCGTCCTATCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QLQEERGRSIYSSETHLIGRLWF*SLVLSP Trigger: TGGAGATAGGACGAGTGACCAAAACCAAAGACGGCC...TATCAGGTGGGTCTCTGAACTATAGATTGACCTGCCTCTCTCTTCCTGGAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027279.12 ENSMUST00000190103.7 |
||
| CDS-3UTR TCA 90 bp | AATGCTGTCCAAGTTTCTGGCTTGGGGTGGTTATTGCTTCAGGTGGCAATATTCGATTCAGGGCCAGTCTaGTCACCATTTCCCACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: NAVQVSGLGWLLLQVAIFDSGPV*SPFPTG Trigger: ACCAGTGGGAAATGGTGATCAGACTGGCCCTGAATC...GAATATTGCCACCTGAAGCAATAACCACCCCAAGCCAGAAACTTGGACAGCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027279.12 ENSMUST00000186684.7 ENSMUST00000188204.7 ENSMUST00000190103.7 |
||
| CDS-3UTR TCA 90 bp | TATATATATATAACAAGTTCCAACCAACCAGGGCTGCACAGAGAAAGACCCTGCTATCCCCTGTCTGTATaGGCCCTCCGATCTCATCCC | + |
|
Preference number: 4 (lower is better) Translates to: YIYITSSNQPGLHRERPCYPLSV*ALRSHP Trigger: GGGATGAGATCGGAGGGCTCATACAGACAGGGGATA...GCAGGGTCTTTCTCTGTGCAGCCCTGGTTGGTTGGAACTTGTTATATATATATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027279.12 ENSMUST00000190103.7 |
||
| CDS-3UTR TCA 90 bp | GACTTTCTCCACCTTAAACTGGCTAAACCAGATTCAGCCACAGAAACTACACAGGATTCAGGGCCAGTCTaGTCACCATTTCCCACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: DFLHLKLAKPDSATETTQDSGPV*SPFPTG Trigger: ACCAGTGGGAAATGGTGATCAGACTGGCCCTGAATC...CTGTGTAGTTTCTGTGGCTGAATCTGGTTTAGCCAGTTTAAGGTGGAGAAAGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186003.7 ENSMUST00000189542.7 |
||
| CDS-3UTR GCA 90 bp | GTTGACAATGCTGTCCAAGTTTCTGGCTTGGGGTGGTTATTGCTTCAGGTGGCACCGGACCATTGCTTCTaGCATATGGAAGATGATATC | + |
|
Preference number: 4 (lower is better) Translates to: VDNAVQVSGLGWLLLQVAPDHCF*HMEDDI Trigger: GATATCATCTTCCATATGGCAGAAGCAATGGTCCGG...TGCCACCTGAAGCAATAACCACCCCAAGCCAGAAACTTGGACAGCATTGTCAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027279.12 ENSMUST00000186684.7 ENSMUST00000190103.7 |
||
| CDS-3UTR TCA 90 bp | TTTCTGGCTTGGGGTGGTTATTGCTTCAGGTGGCAATATTCAAGTTTAAGACAATATCCCCTGTCTGTATaGGCCCTCCGATCTCATCCC | + |
|
Preference number: 4 (lower is better) Translates to: FLAWGGYCFRWQYSSLRQYPLSV*ALRSHP Trigger: GGGATGAGATCGGAGGGCTCATACAGACAGGGGATA...TTGTCTTAAACTTGAATATTGCCACCTGAAGCAATAACCACCCCAAGCCAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027279.12 ENSMUST00000190103.7 |
||
| CDS-3UTR TCA 90 bp | CTGGCTTGGGGTGGTTATTGCTTCAGGTGGCAATATTCAAGTTTAAGACAAGTTGATTCAGGGCCAGTCTaGTCACCATTTCCCACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LAWGGYCFRWQYSSLRQVDSGPV*SPFPTG Trigger: ACCAGTGGGAAATGGTGATCAGACTGGCCCTGAATC...AACTTGTCTTAAACTTGAATATTGCCACCTGAAGCAATAACCACCCCAAGCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027279.12 ENSMUST00000186684.7 ENSMUST00000188204.7 ENSMUST00000190103.7 |
||
| CDS-3UTR GCA 90 bp | AGGTCAGAGCTAGCTTGGCACATGCCTGTTTGGGAAAGTGTTTCCAGTGCTTTTCCGGACCATTGCTTCTaGCATATGGAAGATGATATC | + |
|
Preference number: 4 (lower is better) Translates to: RSELAWHMPVWESVSSAFPDHCF*HMEDDI Trigger: GATATCATCTTCCATATGGCAGAAGCAATGGTCCGG...AAAAGCACTGGAAACACTTTCCCAAACAGGCATGTGCCAAGCTAGCTCTGACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186003.7 ENSMUST00000189542.7 |
||
| CDS-3UTR GCA 90 bp | GTATTAGTACAGGTTAGGGAGAAGACTCAAGAGCACCTGCTGCTCTTACAGAAACCGGACCATTGCTTCTaGCATATGGAAGATGATATC | + |
|
Preference number: 4 (lower is better) Translates to: VLVQVREKTQEHLLLLQKPDHCF*HMEDDI Trigger: GATATCATCTTCCATATGGCAGAAGCAATGGTCCGG...TTTCTGTAAGAGCAGCAGGTGCTCTTGAGTCTTCTCCCTAACCTGTACTAATAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186003.7 ENSMUST00000189542.7 |
||
| CDS-3UTR TCA 90 bp | TTTCTGGCTTGGGGTGGTTATTGCTTCAGGTGGCAATATTCAAGTTTAAGACAAGCATCCTTTCCACATTaGTGCATACCCTCTGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: FLAWGGYCFRWQYSSLRQASFPH*CIPSGQ Trigger: TTGACCAGAGGGTATGCATCAATGTGGAAAGGATGC...TTGTCTTAAACTTGAATATTGCCACCTGAAGCAATAACCACCCCAAGCCAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027279.12 ENSMUST00000190103.7 |
||
| CDS-3UTR TCA 90 bp | CTGTATCTACCACTTTCATTGGGTAAGAGAAAGAGAACTAAGTATCAGGCTTTAGATTCAGGGCCAGTCTaGTCACCATTTCCCACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LYLPLSLGKRKRTKYQALDSGPV*SPFPTG Trigger: ACCAGTGGGAAATGGTGATCAGACTGGCCCTGAATC...TAAAGCCTGATACTTAGTTCTCTTTCTCTTACCCAATGAAAGTGGTAGATACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186003.7 ENSMUST00000189542.7 |
||
| CDS-3UTR GCA 90 bp | TATATATATATAACAAGTTCCAACCAACCAGGGCTGCACAGAGAAAGACCCTGCCCGGACCATTGCTTCTaGCATATGGAAGATGATATC | + |
|
Preference number: 4 (lower is better) Translates to: YIYITSSNQPGLHRERPCPDHCF*HMEDDI Trigger: GATATCATCTTCCATATGGCAGAAGCAATGGTCCGG...GCAGGGTCTTTCTCTGTGCAGCCCTGGTTGGTTGGAACTTGTTATATATATATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027279.12 ENSMUST00000186684.7 ENSMUST00000190103.7 |
||
| CDS-3UTR CCA 90 bp | TCTCAAAATGCTATGATAATCTCCACACAGAGCCTAATGCAGTGCTTACTGAAAGGCCGTCTTTGGTTTTaGTCACTCGTCCTATCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SQNAMIISTQSLMQCLLKGRLWF*SLVLSP Trigger: TGGAGATAGGACGAGTGACCAAAACCAAAGACGGCC...TTTCAGTAAGCACTGCATTAGGCTCTGTGTGGAGATTATCATAGCATTTTGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027279.12 |
||
| 3UTR CAA 72 bp | CTCAAAAATGTTGACAATGCTGTCCAAGTTTCTGGCTaGGGGTGGTTATTGCTTCAGGTGGCAATATTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LKNVDNAVQVSG*GWLLLQVAIFK Trigger: CTTGAATATTGCCACCTGAAGCAATAACCACCCCAAGCCAGAAACTTGGACAGCATTGTCAACATTTTTGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027279.12 ENSMUST00000186684.7 ENSMUST00000190103.7 |
||
| 3UTR CAA 72 bp | GACAGCAAGAACAGTAGACAAAGCTCTCCAGAGTGTTaGATGCAAGTTCTAAGTTCCCTTCCAGATAAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: DSKNSRQSSPEC*MQVLSSLPDKS Trigger: ACTCTTATCTGGAAGGGAACTTAGAACTTGCATCAAACACTCTGGAGAGCTTTGTCTACTGTTCTTGCTGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186003.7 ENSMUST00000189542.7 |
||
| 3UTR CAA 72 bp | TTTCAAACTCATGTGGGAACTGTGCCTAAGGTGGGATaGAAATCTGAAGATGTGTGCTGTGTGCATTCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: FQTHVGTVPKVG*KSEDVCCVHSV Trigger: TACTGAATGCACACAGCACACATCTTCAGATTTCAATCCCACCTTAGGCACAGTTCCCACATGAGTTTGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186003.7 ENSMUST00000189542.7 |
||
| CDS-3UTR TCA 90 bp | TGCACTAAGTGTTCAAGTAGGTCATGTAGTTTAAAAACTACATGTGTCTCTTTGGATTCAGGGCCAGTCTaGTCACCATTTCCCACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: CTKCSSRSCSLKTTCVSLDSGPV*SPFPTG Trigger: ACCAGTGGGAAATGGTGATCAGACTGGCCCTGAATC...CAAAGAGACACATGTAGTTTTTAAACTACATGACCTACTTGAACACTTAGTGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000027279.12 ENSMUST00000185534.2 ENSMUST00000186003.7 ENSMUST00000186684.7 ENSMUST00000188051.7 ENSMUST00000188204.7 ENSMUST00000189542.7 ENSMUST00000190103.7 |
||
| CDS-3UTR GCA 90 bp | CTGGCTTGGGGTGGTTATTGCTTCAGGTGGCAATATTCAAGTTTAAGACAAGTTTTCTATCAGCTACTTTaGAGGATCTCACTTCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: LAWGGYCFRWQYSSLRQVFYQLL*RISLHG Trigger: GCCATGAAGTGAGATCCTGCAAAGTAGCTGATAGAA...AACTTGTCTTAAACTTGAATATTGCCACCTGAAGCAATAACCACCCCAAGCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027279.12 ENSMUST00000190103.7 |
||
| CDS-3UTR CCA 90 bp | CCTCCTTGTAAAAGAGAGACAGCAAGAACAGTAGACAAAGCTCTCCAGAGTGTTATTGCTTCTGCCATATaGAAGATGATATCCCCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: PPCKRETARTVDKALQSVIASAI*KMISPR Trigger: TCTAGGGGATATCATCTTCCATATGGCAGAAGCAAT...AACACTCTGGAGAGCTTTGTCTACTGTTCTTGCTGTCTCTCTTTTACAAGGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186003.7 ENSMUST00000189542.7 |
||
| CDS-3UTR TCA 90 bp | TCTCAAAATGCTATGATAATCTCCACACAGAGCCTAATGCAGTGCTTACTGAAACTGGGTTTGGCTCACTaGAATTTGGCACTTCTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: SQNAMIISTQSLMQCLLKLGLAH*NLALLN Trigger: ATTCAGAAGTGCCAAATTTCAGTGAGCCAAACCCAG...TTTCAGTAAGCACTGCATTAGGCTCTGTGTGGAGATTATCATAGCATTTTGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027279.12 |
||
| CDS-3UTR TCA 90 bp | GCCTCAAAAATACAACTAGTATCAATGAGACCACTGTCCAATAAAGGTGTTATAGCATCCTTTCCACATTaGTGCATACCCTCTGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: ASKIQLVSMRPLSNKGVIASFPH*CIPSGQ Trigger: TTGACCAGAGGGTATGCATCAATGTGGAAAGGATGC...TATAACACCTTTATTGGACAGTGGTCTCATTGATACTAGTTGTATTTTTGAGGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027279.12 ENSMUST00000190103.7 |
||
| CDS-3UTR GCA 90 bp | CTGGCTTGGGGTGGTTATTGCTTCAGGTGGCAATATTCAAGTTTAAGACAAGTTGTCCAAATGTATTGGTaGTCAGTTTATCCTTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LAWGGYCFRWQYSSLRQVVQMYW*SVYPSV Trigger: AACAGAAGGATAAACTGAGCACCAATACATTTGGAC...AACTTGTCTTAAACTTGAATATTGCCACCTGAAGCAATAACCACCCCAAGCCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027279.12 ENSMUST00000186684.7 ENSMUST00000188204.7 ENSMUST00000190103.7 |
||
| CDS-3UTR GCA 90 bp | TCCAAGTTTCTGGCTTGGGGTGGTTATTGCTTCAGGTGGCAATATTCAAGTTTAGTCCAAATGTATTGGTaGTCAGTTTATCCTTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SKFLAWGGYCFRWQYSSLVQMYW*SVYPSV Trigger: AACAGAAGGATAAACTGAGCACCAATACATTTGGAC...TAAACTTGAATATTGCCACCTGAAGCAATAACCACCCCAAGCCAGAAACTTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027279.12 ENSMUST00000186684.7 ENSMUST00000188204.7 ENSMUST00000190103.7 |
||
| 3UTR CAA 72 bp | CTGGAAGAAAGGAAATGCCTACTTCTACCCGACTACTaGCAACTGGTAGTCACATGGCTATATGAATTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: LEERKCLLLPDY*QLVVTWLYEFN Trigger: ATTAAATTCATATAGCCATGTGACTACCAGTTGCAAGTAGTCGGGTAGAAGTAGGCATTTCCTTTCTTCCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027279.12 ENSMUST00000186684.7 ENSMUST00000190103.7 |
||
| CDS-3UTR GCA 90 bp | TGCACTAAGTGTTCAAGTAGGTCATGTAGTTTAAAAACTACATGTGTCTCTTTGCCGGACCATTGCTTCTaGCATATGGAAGATGATATC | + |
|
Preference number: 4 (lower is better) Translates to: CTKCSSRSCSLKTTCVSLPDHCF*HMEDDI Trigger: GATATCATCTTCCATATGGCAGAAGCAATGGTCCGG...CAAAGAGACACATGTAGTTTTTAAACTACATGACCTACTTGAACACTTAGTGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000027279.12 ENSMUST00000185534.2 ENSMUST00000186003.7 ENSMUST00000186684.7 ENSMUST00000188051.7 ENSMUST00000188204.7 ENSMUST00000189542.7 ENSMUST00000190103.7 |
||
| CDS-3UTR CCA 90 bp | TCTCAAAATGCTATGATAATCTCCACACAGAGCCTAATGCAGTGCTTACTGAAAATTGCTTCTGCCATATaGAAGATGATATCCCCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: SQNAMIISTQSLMQCLLKIASAI*KMISPR Trigger: TCTAGGGGATATCATCTTCCATATGGCAGAAGCAAT...TTTCAGTAAGCACTGCATTAGGCTCTGTGTGGAGATTATCATAGCATTTTGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027279.12 |
||
| 3UTR CAA 72 bp | TCATGCCCAAGTATCTCTCTGTATCTACCACTTTCATaGGGTAAGAGAAAGAGAACTAAGTATCAGGCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: SCPSISLYLPLS*GKRKRTKYQAL Trigger: TAAAGCCTGATACTTAGTTCTCTTTCTCTTACCCAATGAAAGTGGTAGATACAGAGAGATACTTGGGCATGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186003.7 ENSMUST00000189542.7 |
||
| CDS-3UTR GCA 90 bp | GCCTCAAAAATACAACTAGTATCAATGAGACCACTGTCCAATAAAGGTGTTATATTCTATCAGCTACTTTaGAGGATCTCACTTCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: ASKIQLVSMRPLSNKGVIFYQLL*RISLHG Trigger: GCCATGAAGTGAGATCCTGCAAAGTAGCTGATAGAA...TATAACACCTTTATTGGACAGTGGTCTCATTGATACTAGTTGTATTTTTGAGGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027279.12 ENSMUST00000190103.7 |
||
| 3UTR CAA 72 bp | TATGTAGAGGGGCTAATTATTTCTACTCAGAAACACTaGCTTCAGTTACTCTGTGCTTTGGACATTCTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: YVEGLIISTQKH*LQLLCALDILL Trigger: TAGAAGAATGTCCAAAGCACAGAGTAACTGAAGCAAGTGTTTCTGAGTAGAAATAATTAGCCCCTCTACATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186003.7 ENSMUST00000189542.7 |
||
| CDS-3UTR CCA 90 bp | TGCACTAAGTGTTCAAGTAGGTCATGTAGTTTAAAAACTACATGTGTCTCTTTGATTGCTTCTGCCATATaGAAGATGATATCCCCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: CTKCSSRSCSLKTTCVSLIASAI*KMISPR Trigger: TCTAGGGGATATCATCTTCCATATGGCAGAAGCAAT...CAAAGAGACACATGTAGTTTTTAAACTACATGACCTACTTGAACACTTAGTGCA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000027279.12 ENSMUST00000185534.2 ENSMUST00000186003.7 ENSMUST00000186684.7 ENSMUST00000188051.7 ENSMUST00000188204.7 ENSMUST00000189542.7 ENSMUST00000190103.7 |
||
| CDS-3UTR GCA 90 bp | TGCACTAAGTGTTCAAGTAGGTCATGTAGTTTAAAAACTACATGTGTCTCTTTGGTCCAAATGTATTGGTaGTCAGTTTATCCTTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: CTKCSSRSCSLKTTCVSLVQMYW*SVYPSV Trigger: AACAGAAGGATAAACTGAGCACCAATACATTTGGAC...CAAAGAGACACATGTAGTTTTTAAACTACATGACCTACTTGAACACTTAGTGCA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000027279.12 ENSMUST00000185534.2 ENSMUST00000186003.7 ENSMUST00000186684.7 ENSMUST00000188051.7 ENSMUST00000188204.7 ENSMUST00000189542.7 ENSMUST00000190103.7 |
||
| 3UTR CAA 72 bp | TCCAAGCAGACTGGAAAGGCAATTATTCATTACTGTTaGGATTTCACTTGCTTTGGTTTTAGAAGTTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SKQTGKAIIHYC*DFTCFGFRSFL Trigger: AAGAAAACTTCTAAAACCAAAGCAAGTGAAATCCAAACAGTAATGAATAATTGCCTTTCCAGTCTGCTTGGA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000186003.7 ENSMUST00000189542.7 ENSMUST00000190103.7 |
||
| CDS TCA 90 bp | GCTCTCCTCGGATCTCTGGCGTTACTTATTGTGGTCCTGACTGTTTaGCTACTAGGTGTTCCTGGTAGCTGTGGACTGATAGGTCCCGGA | + |
|
Preference number: 5 (lower is better) Translates to: ALLGSLALLIVVLTV*LLGVPGSCGLIGPG Trigger: TCCGGGACCTATCAGTCCACAGCTACCAGGAACACCTAGTAGTCAAACAGTCAGGACCACAATAAGTAACGCCAGAGATCCGAGGAGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000027279.12 ENSMUST00000185534.2 ENSMUST00000186003.7 ENSMUST00000186684.7 ENSMUST00000188051.7 ENSMUST00000188204.7 ENSMUST00000189542.7 ENSMUST00000190103.7 |
||
| CDS-3UTR CAA 90 bp | CAGCTCCAGGAAGAGAGAGGCAGGTCAATCTATAGTTCAGAGACCCACCTGATATGTGGTCCTGACTGTTaGACTACTAGGTGTTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: QLQEERGRSIYSSETHLICGPDC*TTRCSW Trigger: CCAGGAACACCTAGTAGTCAAACAGTCAGGACCACA...TATCAGGTGGGTCTCTGAACTATAGATTGACCTGCCTCTCTCTTCCTGGAGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027279.12 ENSMUST00000186684.7 ENSMUST00000190103.7 |
||
| CDS-3UTR CAA 90 bp | AGGTCAGAGCTAGCTTGGCACATGCCTGTTTGGGAAAGTGTTTCCAGTGCTTTTATAGGTCCCGGACCATaGCTTCTGCCATATGGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: RSELAWHMPVWESVSSAFIGPGP*LLPYGR Trigger: TCTTCCATATGGCAGAAGCAATGGTCCGGGACCTAT...AAAAGCACTGGAAACACTTTCCCAAACAGGCATGTGCCAAGCTAGCTCTGACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186003.7 ENSMUST00000189542.7 |
||
| CDS-3UTR CAA 90 bp | TTTCTGGCTTGGGGTGGTTATTGCTTCAGGTGGCAATATTCAAGTTTAAGACAATGGCCGTCTTTGGTTTaGGTCACTCGTCCTATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: FLAWGGYCFRWQYSSLRQWPSLV*VTRPIS Trigger: GGAGATAGGACGAGTGACCAAAACCAAAGACGGCCA...TTGTCTTAAACTTGAATATTGCCACCTGAAGCAATAACCACCCCAAGCCAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027279.12 ENSMUST00000190103.7 |
||
| CDS-3UTR CAA 90 bp | CTGGCTTGGGGTGGTTATTGCTTCAGGTGGCAATATTCAAGTTTAAGACAAGTTGGCATCCTTTCCACATaGATGCATACCCTCTGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LAWGGYCFRWQYSSLRQVGILST*MHTLWS Trigger: TGACCAGAGGGTATGCATCAATGTGGAAAGGATGCC...AACTTGTCTTAAACTTGAATATTGCCACCTGAAGCAATAACCACCCCAAGCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027279.12 ENSMUST00000190103.7 |
||
| CDS-3UTR CAA 90 bp | CTGGCTTGGGGTGGTTATTGCTTCAGGTGGCAATATTCAAGTTTAAGACAAGTTATAGGTCCCGGACCATaGCTTCTGCCATATGGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: LAWGGYCFRWQYSSLRQVIGPGP*LLPYGR Trigger: TCTTCCATATGGCAGAAGCAATGGTCCGGGACCTAT...AACTTGTCTTAAACTTGAATATTGCCACCTGAAGCAATAACCACCCCAAGCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027279.12 ENSMUST00000186684.7 ENSMUST00000188204.7 ENSMUST00000190103.7 |
||
| CDS-3UTR CAA 90 bp | GAGTTAGGGAGCAGTCAAGCTGAAGATGAATACAACTTCAGTAAAATGGACTGGTGTGGTCCTGACTGTTaGACTACTAGGTGTTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ELGSSQAEDEYNFSKMDWCGPDC*TTRCSW Trigger: CCAGGAACACCTAGTAGTCAAACAGTCAGGACCACA...CCAGTCCATTTTACTGAAGTTGTATTCATCTTCAGCTTGACTGCTCCCTAACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000027279.12 ENSMUST00000186003.7 ENSMUST00000186684.7 ENSMUST00000189542.7 ENSMUST00000190103.7 |
||
| CDS-3UTR CAA 90 bp | TCCAAGTTTCTGGCTTGGGGTGGTTATTGCTTCAGGTGGCAATATTCAAGTTTATGTGGTCCTGACTGTTaGACTACTAGGTGTTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SKFLAWGGYCFRWQYSSLCGPDC*TTRCSW Trigger: CCAGGAACACCTAGTAGTCAAACAGTCAGGACCACA...TAAACTTGAATATTGCCACCTGAAGCAATAACCACCCCAAGCCAGAAACTTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027279.12 ENSMUST00000186684.7 ENSMUST00000188204.7 ENSMUST00000190103.7 |
||
| CDS-3UTR CAA 90 bp | CTGGCTTGGGGTGGTTATTGCTTCAGGTGGCAATATTCAAGTTTAAGACAAGTTTGTGGTCCTGACTGTTaGACTACTAGGTGTTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LAWGGYCFRWQYSSLRQVCGPDC*TTRCSW Trigger: CCAGGAACACCTAGTAGTCAAACAGTCAGGACCACA...AACTTGTCTTAAACTTGAATATTGCCACCTGAAGCAATAACCACCCCAAGCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027279.12 ENSMUST00000186684.7 ENSMUST00000188204.7 ENSMUST00000190103.7 |
||
| CDS-3UTR CAA 90 bp | AATGCTGTCCAAGTTTCTGGCTTGGGGTGGTTATTGCTTCAGGTGGCAATATTCATCCTTCTGTTCATTTaGTACCCCTCTATTCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: NAVQVSGLGWLLLQVAIFILLFI*YPSILL Trigger: CAGCAGAATAGAGGGGTACAAAATGAACAGAAGGAT...GAATATTGCCACCTGAAGCAATAACCACCCCAAGCCAGAAACTTGGACAGCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027279.12 ENSMUST00000186684.7 ENSMUST00000188204.7 ENSMUST00000190103.7 |
||
| CDS-3UTR CAA 90 bp | GATTCCTCAAATAGTGCTTTATCCTCTGATAGACTCACAGCCATGAAGCTAGTATGTGGTCCTGACTGTTaGACTACTAGGTGTTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: DSSNSALSSDRLTAMKLVCGPDC*TTRCSW Trigger: CCAGGAACACCTAGTAGTCAAACAGTCAGGACCACA...TACTAGCTTCATGGCTGTGAGTCTATCAGAGGATAAAGCACTATTTGAGGAATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189542.7 |
||
| CDS-3UTR CAA 90 bp | ATGAGTGGTATCCAAGCAGACTGGAAAGGCAATTATTCATTACTGTTTGGATTTTGGCCGTCTTTGGTTTaGGTCACTCGTCCTATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: MSGIQADWKGNYSLLFGFWPSLV*VTRPIS Trigger: GGAGATAGGACGAGTGACCAAAACCAAAGACGGCCA...AAATCCAAACAGTAATGAATAATTGCCTTTCCAGTCTGCTTGGATACCACTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190103.7 |
||
| CDS-3UTR CAA 90 bp | GAGTTAGGGAGCAGTCAAGCTGAAGATGAATACAACTTCAGTAAAATGGACTGGGTTCTATCAGCTACTTaGCAGGATCTCACTTCATGG | + |
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Preference number: 5 (lower is better) Translates to: ELGSSQAEDEYNFSKMDWVLSAT*QDLTSW Trigger: CCATGAAGTGAGATCCTGCAAAGTAGCTGATAGAAC...CCAGTCCATTTTACTGAAGTTGTATTCATCTTCAGCTTGACTGCTCCCTAACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027279.12 ENSMUST00000190103.7 |
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| CDS-3UTR CAA 90 bp | AACATTATGACAAACATTACAAAGTTTATGCAGAAGCCAGACTCACAGAGGCTAACTTCATGGCCGTCTTaGGTTTTGGTCACTCGTCCT | + |
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Preference number: 5 (lower is better) Translates to: NIMTNITKFMQKPDSQRLTSWPS*VLVTRP Trigger: AGGACGAGTGACCAAAACCAAAGACGGCCATGAAGT...TAGCCTCTGTGAGTCTGGCTTCTGCATAAACTTTGTAATGTTTGTCATAATGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027279.12 ENSMUST00000190103.7 |
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| CDS-3UTR CAA 90 bp | ATGAGTGGTATCCAAGCAGACTGGAAAGGCAATTATTCATTACTGTTTGGATTTACTTCATGGCCGTCTTaGGTTTTGGTCACTCGTCCT | + |
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Preference number: 5 (lower is better) Translates to: MSGIQADWKGNYSLLFGFTSWPS*VLVTRP Trigger: AGGACGAGTGACCAAAACCAAAGACGGCCATGAAGT...AAATCCAAACAGTAATGAATAATTGCCTTTCCAGTCTGCTTGGATACCACTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190103.7 |
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| CDS-3UTR CAA 90 bp | ATGAGTGGTATCCAAGCAGACTGGAAAGGCAATTATTCATTACTGTTTGGATTTGGCATCCTTTCCACATaGATGCATACCCTCTGGTCA | + |
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Preference number: 5 (lower is better) Translates to: MSGIQADWKGNYSLLFGFGILST*MHTLWS Trigger: TGACCAGAGGGTATGCATCAATGTGGAAAGGATGCC...AAATCCAAACAGTAATGAATAATTGCCTTTCCAGTCTGCTTGGATACCACTCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190103.7 |
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| CDS-3UTR CAA 90 bp | TATATATATATAACAAGTTCCAACCAACCAGGGCTGCACAGAGAAAGACCCTGCATCCTTCTGTTCATTTaGTACCCCTCTATTCTGCTG | + |
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Preference number: 5 (lower is better) Translates to: YIYITSSNQPGLHRERPCILLFI*YPSILL Trigger: CAGCAGAATAGAGGGGTACAAAATGAACAGAAGGAT...GCAGGGTCTTTCTCTGTGCAGCCCTGGTTGGTTGGAACTTGTTATATATATATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027279.12 ENSMUST00000186684.7 ENSMUST00000190103.7 |
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| CDS-3UTR CAA 90 bp | GACAAACATTACAAAGTTTATGCAGAAGCCAGACTCACAGAGGCTATATATAAGATAGGTCCCGGACCATaGCTTCTGCCATATGGAAGA | + |
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Preference number: 5 (lower is better) Translates to: DKHYKVYAEARLTEAIYKIGPGP*LLPYGR Trigger: TCTTCCATATGGCAGAAGCAATGGTCCGGGACCTAT...CTTATATATAGCCTCTGTGAGTCTGGCTTCTGCATAAACTTTGTAATGTTTGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027279.12 ENSMUST00000186684.7 ENSMUST00000188204.7 ENSMUST00000190103.7 |
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| CDS-3UTR CAA 90 bp | AACATTATGACAAACATTACAAAGTTTATGCAGAAGCCAGACTCACAGAGGCTAATAGGTCCCGGACCATaGCTTCTGCCATATGGAAGA | + |
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Preference number: 5 (lower is better) Translates to: NIMTNITKFMQKPDSQRLIGPGP*LLPYGR Trigger: TCTTCCATATGGCAGAAGCAATGGTCCGGGACCTAT...TAGCCTCTGTGAGTCTGGCTTCTGCATAAACTTTGTAATGTTTGTCATAATGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027279.12 ENSMUST00000186684.7 ENSMUST00000188204.7 ENSMUST00000190103.7 |
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| CDS-3UTR CAA 90 bp | CTGTATCTACCACTTTCATTGGGTAAGAGAAAGAGAACTAAGTATCAGGCTTTAATAGGTCCCGGACCATaGCTTCTGCCATATGGAAGA | + |
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Preference number: 5 (lower is better) Translates to: LYLPLSLGKRKRTKYQALIGPGP*LLPYGR Trigger: TCTTCCATATGGCAGAAGCAATGGTCCGGGACCTAT...TAAAGCCTGATACTTAGTTCTCTTTCTCTTACCCAATGAAAGTGGTAGATACAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186003.7 ENSMUST00000189542.7 |
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| CDS-3UTR CAA 90 bp | TGCACTAAGTGTTCAAGTAGGTCATGTAGTTTAAAAACTACATGTGTCTCTTTGATAGGTCCCGGACCATaGCTTCTGCCATATGGAAGA | + |
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Preference number: 5 (lower is better) Translates to: CTKCSSRSCSLKTTCVSLIGPGP*LLPYGR Trigger: TCTTCCATATGGCAGAAGCAATGGTCCGGGACCTAT...CAAAGAGACACATGTAGTTTTTAAACTACATGACCTACTTGAACACTTAGTGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000027279.12 ENSMUST00000185534.2 ENSMUST00000186003.7 ENSMUST00000186684.7 ENSMUST00000188051.7 ENSMUST00000188204.7 ENSMUST00000189542.7 ENSMUST00000190103.7 |
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| CDS-3UTR CAA 90 bp | TGCACTAAGTGTTCAAGTAGGTCATGTAGTTTAAAAACTACATGTGTCTCTTTGTGTGGTCCTGACTGTTaGACTACTAGGTGTTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: CTKCSSRSCSLKTTCVSLCGPDC*TTRCSW Trigger: CCAGGAACACCTAGTAGTCAAACAGTCAGGACCACA...CAAAGAGACACATGTAGTTTTTAAACTACATGACCTACTTGAACACTTAGTGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000027279.12 ENSMUST00000185534.2 ENSMUST00000186003.7 ENSMUST00000186684.7 ENSMUST00000188051.7 ENSMUST00000188204.7 ENSMUST00000189542.7 ENSMUST00000190103.7 |
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| CDS-3UTR CAA 90 bp | GCCTCAAAAATACAACTAGTATCAATGAGACCACTGTCCAATAAAGGTGTTATATGTGGTCCTGACTGTTaGACTACTAGGTGTTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: ASKIQLVSMRPLSNKGVICGPDC*TTRCSW Trigger: CCAGGAACACCTAGTAGTCAAACAGTCAGGACCACA...TATAACACCTTTATTGGACAGTGGTCTCATTGATACTAGTTGTATTTTTGAGGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027279.12 ENSMUST00000186684.7 ENSMUST00000190103.7 |
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| CDS-3UTR CAA 90 bp | AACATTATGACAAACATTACAAAGTTTATGCAGAAGCCAGACTCACAGAGGCTAATCCTTCTGTTCATTTaGTACCCCTCTATTCTGCTG | + |
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Preference number: 5 (lower is better) Translates to: NIMTNITKFMQKPDSQRLILLFI*YPSILL Trigger: CAGCAGAATAGAGGGGTACAAAATGAACAGAAGGAT...TAGCCTCTGTGAGTCTGGCTTCTGCATAAACTTTGTAATGTTTGTCATAATGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027279.12 ENSMUST00000186684.7 ENSMUST00000188204.7 ENSMUST00000190103.7 |
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| CDS-3UTR CAA 90 bp | ATGAGTGGTATCCAAGCAGACTGGAAAGGCAATTATTCATTACTGTTTGGATTTATCCTTCTGTTCATTTaGTACCCCTCTATTCTGCTG | + |
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Preference number: 5 (lower is better) Translates to: MSGIQADWKGNYSLLFGFILLFI*YPSILL Trigger: CAGCAGAATAGAGGGGTACAAAATGAACAGAAGGAT...AAATCCAAACAGTAATGAATAATTGCCTTTCCAGTCTGCTTGGATACCACTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000186003.7 ENSMUST00000189542.7 ENSMUST00000190103.7 |
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| CDS-3UTR CAA 90 bp | TGCACTAAGTGTTCAAGTAGGTCATGTAGTTTAAAAACTACATGTGTCTCTTTGATCCTTCTGTTCATTTaGTACCCCTCTATTCTGCTG | + |
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Preference number: 5 (lower is better) Translates to: CTKCSSRSCSLKTTCVSLILLFI*YPSILL Trigger: CAGCAGAATAGAGGGGTACAAAATGAACAGAAGGAT...CAAAGAGACACATGTAGTTTTTAAACTACATGACCTACTTGAACACTTAGTGCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000027279.12 ENSMUST00000185534.2 ENSMUST00000186003.7 ENSMUST00000186684.7 ENSMUST00000188051.7 ENSMUST00000188204.7 ENSMUST00000189542.7 ENSMUST00000190103.7 |
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| CDS-3UTR CAA 90 bp | ATTATTTCTACTCAGAAACACTTGCTTCAGTTACTCTGTGCTTTGGACATTCTTATCCTTCTGTTCATTTaGTACCCCTCTATTCTGCTG | + |
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Preference number: 5 (lower is better) Translates to: IISTQKHLLQLLCALDILILLFI*YPSILL Trigger: CAGCAGAATAGAGGGGTACAAAATGAACAGAAGGAT...AAGAATGTCCAAAGCACAGAGTAACTGAAGCAAGTGTTTCTGAGTAGAAATAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186003.7 ENSMUST00000189542.7 |
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| CDS CCA 72 bp | TGGACTGATAGGTCCCGGACCATTGCTTCTGCCATATaGAAGATGATATCCCCTAGATTCAGGGCCAGTCTG | + |
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Preference number: 6 (lower is better) Translates to: WTDRSRTIASAI*KMISPRFRASL Trigger: CAGACTGGCCCTGAATCTAGGGGATATCATCTTCCATATGGCAGAAGCAATGGTCCGGGACCTATCAGTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000027279.12 ENSMUST00000185534.2 ENSMUST00000186003.7 ENSMUST00000186684.7 ENSMUST00000188051.7 ENSMUST00000188204.7 ENSMUST00000189542.7 ENSMUST00000190103.7 |
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| CDS TCA 72 bp | GGATCTCTGGCGTTACTTATTGTGGTCCTGACTGTTTaGCTACTAGGTGTTCCTGGTAGCTGTGGACTGATA | + |
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Preference number: 6 (lower is better) Translates to: GSLALLIVVLTV*LLGVPGSCGLI Trigger: TATCAGTCCACAGCTACCAGGAACACCTAGTAGTCAAACAGTCAGGACCACAATAAGTAACGCCAGAGATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000027279.12 ENSMUST00000185534.2 ENSMUST00000186003.7 ENSMUST00000186684.7 ENSMUST00000188051.7 ENSMUST00000188204.7 ENSMUST00000189542.7 ENSMUST00000190103.7 |
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| CDS CCA 72 bp | CCTAGATTCAGGGCCAGTCTGATCACCATTTCCCACTaGTCCAAATGTATTGGTGCTCAGTTTATCCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: PRFRASLITISH*SKCIGAQFILL Trigger: CAGAAGGATAAACTGAGCACCAATACATTTGGACCAGTGGGAAATGGTGATCAGACTGGCCCTGAATCTAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000027279.12 ENSMUST00000185534.2 ENSMUST00000186003.7 ENSMUST00000186684.7 ENSMUST00000188051.7 ENSMUST00000188204.7 ENSMUST00000189542.7 ENSMUST00000190103.7 |
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| CDS CAA 72 bp | ACTTTGCAGGATCTCACTTCATGGCCGTCTTTGGTTTaGGTCACTCGTCCTATCTCCAGGACAATAAAGACG | + |
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Preference number: 6 (lower is better) Translates to: TLQDLTSWPSLV*VTRPISRTIKT Trigger: CGTCTTTATTGTCCTGGAGATAGGACGAGTGACCAAAACCAAAGACGGCCATGAAGTGAGATCCTGCAAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027279.12 ENSMUST00000190103.7 |
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| CDS GCA 72 bp | TCTGATCACCATTTCCCACTGGTCCAAATGTATTGGTaGTCAGTTTATCCTTCTGTTCATTTTGTACCCCTC | + |
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Preference number: 6 (lower is better) Translates to: SDHHFPLVQMYW*SVYPSVHFVPL Trigger: GAGGGGTACAAAATGAACAGAAGGATAAACTGAGCACCAATACATTTGGACCAGTGGGAAATGGTGATCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000027279.12 ENSMUST00000185534.2 ENSMUST00000186003.7 ENSMUST00000186684.7 ENSMUST00000188051.7 ENSMUST00000188204.7 ENSMUST00000189542.7 ENSMUST00000190103.7 |
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| CDS CCA 72 bp | CAGTCTGATCACCATTTCCCACTGGTCCAAATGTATTaGTGCTCAGTTTATCCTTCTGTTCATTTTGTACCC | + |
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Preference number: 6 (lower is better) Translates to: QSDHHFPLVQMY*CSVYPSVHFVP Trigger: GGGTACAAAATGAACAGAAGGATAAACTGAGCACCAATACATTTGGACCAGTGGGAAATGGTGATCAGACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000027279.12 ENSMUST00000185534.2 ENSMUST00000186003.7 ENSMUST00000186684.7 ENSMUST00000188051.7 ENSMUST00000188204.7 ENSMUST00000189542.7 ENSMUST00000190103.7 |
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