Pregenerated sensors for NAB2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025402Ensembl transcript IDs: ENSMUST00000026469.9, ENSMUST00000099157.4, ENSMUST00000128780.2, ENSMUST00000129252.2
Found 169 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCTGGAGGCAAAGTCCGTGCCCCTAAGCCGGGTGAGGGCACACCTTaGACCGTCCTTGTGTCCTCTGGCCAGGCCCCTGCCTGTTATTGC | + |
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Preference number: 1 (lower is better) Translates to: AGGKVRAPKPGEGTP*TVLVSSGQAPACYC Trigger: GCAATAACAGGCAGGGGCCTGGCCAGAGGACACAAGGACGGTGCAAGGTGTGCCCTCACCCGGCTTAGGGGCACGGACTTTGCCTCCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| 3UTR-3UTR CCA 90 bp | AGGCCTCTAAGGGGCTGGTGGAGGGAACTTCGGGGCACCCTCCCACACAGTGCTCGTCCTTGTGTCCTCTaGCCAGGCCCCTGCCTGTTA | + |
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Preference number: 2 (lower is better) Translates to: RPLRGWWRELRGTLPHSARPCVL*PGPCLL Trigger: TAACAGGCAGGGGCCTGGCCAGAGGACACAAGGACG...AGCACTGTGTGGGAGGGTGCCCCGAAGTTCCCTCCACCAGCCCCTTAGAGGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| 3UTR-3UTR GCA 90 bp | AGGCCTCTAAGGGGCTGGTGGAGGGAACTTCGGGGCACCCTCCCACACAGTGCTCTCTGGCCAGGCCCCTaGCTGTTATTGCTTGAAGCC | + |
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Preference number: 2 (lower is better) Translates to: RPLRGWWRELRGTLPHSALWPGP*LLLLEA Trigger: GGCTTCAAGCAATAACAGGCAGGGGCCTGGCCAGAG...AGCACTGTGTGGGAGGGTGCCCCGAAGTTCCCTCCACCAGCCCCTTAGAGGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| 3UTR-3UTR CCA 90 bp | CTAAGCCGGGTGAGGGCACACCTTGCACCGTCCTTGTGTCCTCTGGCCAGGCCCAGTGAGCCAGAAGTCTaGGTCCTGGGTCTGAGACTT | + |
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Preference number: 2 (lower is better) Translates to: LSRVRAHLAPSLCPLARPSEPEV*VLGLRL Trigger: AAGTCTCAGACCCAGGACCCAGACTTCTGGCTCACT...GGGCCTGGCCAGAGGACACAAGGACGGTGCAAGGTGTGCCCTCACCCGGCTTAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| 3UTR-3UTR GCA 90 bp | AGGCCTCTAAGGGGCTGGTGGAGGGAACTTCGGGGCACCCTCCCACACAGTGCTAGCTGCTCACACCACTaGTGGCCACCTGGAGAATAT | + |
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Preference number: 2 (lower is better) Translates to: RPLRGWWRELRGTLPHSASCSHH*WPPGEY Trigger: ATATTCTCCAGGTGGCCAGCAGTGGTGTGAGCAGCT...AGCACTGTGTGGGAGGGTGCCCCGAAGTTCCCTCCACCAGCCCCTTAGAGGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| 3UTR-3UTR CCA 90 bp | AGGCCTCTAAGGGGCTGGTGGAGGGAACTTCGGGGCACCCTCCCACACAGTGCTTGGCGAGTGCAAGGATaGAGAATGTGGGGGTCTAAG | + |
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Preference number: 2 (lower is better) Translates to: RPLRGWWRELRGTLPHSAWRVQG*RMWGSK Trigger: CTTAGACCCCCACATTCTCCATCCTTGCACTCGCCA...AGCACTGTGTGGGAGGGTGCCCCGAAGTTCCCTCCACCAGCCCCTTAGAGGCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| 3UTR-3UTR TCA 90 bp | TGTCCAAGTGAAGTAGTTCAGCTGCTCACACCACTGCTGGCCACCTGGAGAATAATGTGGGGGTCTAAGTaGGCCAGAAGTCTGGGTCCT | + |
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Preference number: 2 (lower is better) Translates to: CPSEVVQLLTPLLATWRIMWGSK*ARSLGP Trigger: AGGACCCAGACTTCTGGCTCACTTAGACCCCCACAT...TATTCTCCAGGTGGCCAGCAGTGGTGTGAGCAGCTGAACTACTTCACTTGGACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| 3UTR-3UTR GCA 90 bp | CTTCCTGGGGAAGTTCTTTCTCCGTGTCCAAGTGAAGTAGTTCAGCTGCTCACACTCTGGCCAGGCCCCTaGCTGTTATTGCTTGAAGCC | + |
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Preference number: 2 (lower is better) Translates to: LPGEVLSPCPSEVVQLLTLWPGP*LLLLEA Trigger: GGCTTCAAGCAATAACAGGCAGGGGCCTGGCCAGAG...TGTGAGCAGCTGAACTACTTCACTTGGACACGGAGAAAGAACTTCCCCAGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| 3UTR-3UTR TCA 90 bp | CTTCCTGGGGAAGTTCTTTCTCCGTGTCCAAGTGAAGTAGTTCAGCTGCTCACAATGTGGGGGTCTAAGTaGGCCAGAAGTCTGGGTCCT | + |
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Preference number: 2 (lower is better) Translates to: LPGEVLSPCPSEVVQLLTMWGSK*ARSLGP Trigger: AGGACCCAGACTTCTGGCTCACTTAGACCCCCACAT...TGTGAGCAGCTGAACTACTTCACTTGGACACGGAGAAAGAACTTCCCCAGGAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| 3UTR-3UTR TCA 90 bp | TGTACACAATCTGAAAAGAAAGACACGCTAAGTGTTCGACAGGTGCTGCAGTCCCCTCCCACACAGTGCTaGGAGAAAGGTCTGCGGGGA | + |
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Preference number: 2 (lower is better) Translates to: CTQSEKKDTLSVRQVLQSPPTQC*EKGLRG Trigger: TCCCCGCAGACCTTTCTCTCAGCACTGTGTGGGAGG...GGACTGCAGCACCTGTCGAACACTTAGCGTGTCTTTCTTTTCAGATTGTGTACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| 3UTR-3UTR CCA 90 bp | TGTCCAAGTGAAGTAGTTCAGCTGCTCACACCACTGCTGGCCACCTGGAGAATATGGCGAGTGCAAGGATaGAGAATGTGGGGGTCTAAG | + |
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Preference number: 2 (lower is better) Translates to: CPSEVVQLLTPLLATWRIWRVQG*RMWGSK Trigger: CTTAGACCCCCACATTCTCCATCCTTGCACTCGCCA...TATTCTCCAGGTGGCCAGCAGTGGTGTGAGCAGCTGAACTACTTCACTTGGACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| 3UTR-3UTR CCA 90 bp | ACGGGTGGGCAAACTGCAGCACTTGTTAAATTAAAGAAACAAACTAGAAGCACGAGAGCCCCAGCAGGCTaGAGGCAAAGTCCGTGCCCC | + |
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Preference number: 2 (lower is better) Translates to: TGGQTAALVKLKKQTRSTRAPAG*RQSPCP Trigger: GGGGCACGGACTTTGCCTCCAGCCTGCTGGGGCTCT...CGTGCTTCTAGTTTGTTTCTTTAATTTAACAAGTGCTGCAGTTTGCCCACCCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| 3UTR-3UTR GCA 90 bp | TGTACACAATCTGAAAAGAAAGACACGCTAAGTGTTCGACAGGTGCTGCAGTCCGGTGAGGGCACACCTTaGACCGTCCTTGTGTCCTCT | + |
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Preference number: 2 (lower is better) Translates to: CTQSEKKDTLSVRQVLQSGEGTP*TVLVSS Trigger: AGAGGACACAAGGACGGTGCAAGGTGTGCCCTCACC...GGACTGCAGCACCTGTCGAACACTTAGCGTGTCTTTCTTTTCAGATTGTGTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| 3UTR-3UTR TCA 90 bp | TGTACACAATCTGAAAAGAAAGACACGCTAAGTGTTCGACAGGTGCTGCAGTCCCTGCCTGTTATTGCTTaGAGCCCCATAGTCCTGTGC | + |
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Preference number: 2 (lower is better) Translates to: CTQSEKKDTLSVRQVLQSLPVIA*SPIVLC Trigger: GCACAGGACTATGGGGCTTCAAGCAATAACAGGCAG...GGACTGCAGCACCTGTCGAACACTTAGCGTGTCTTTCTTTTCAGATTGTGTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| 3UTR-3UTR GCA 90 bp | ACGGGTGGGCAAACTGCAGCACTTGTTAAATTAAAGAAACAAACTAGAAGCACGGGTGAGGGCACACCTTaGACCGTCCTTGTGTCCTCT | + |
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Preference number: 2 (lower is better) Translates to: TGGQTAALVKLKKQTRSTGEGTP*TVLVSS Trigger: AGAGGACACAAGGACGGTGCAAGGTGTGCCCTCACC...CGTGCTTCTAGTTTGTTTCTTTAATTTAACAAGTGCTGCAGTTTGCCCACCCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| 3UTR-3UTR CCA 90 bp | TGTACACAATCTGAAAAGAAAGACACGCTAAGTGTTCGACAGGTGCTGCAGTCCAGTGAGCCAGAAGTCTaGGTCCTGGGTCTGAGACTT | + |
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Preference number: 2 (lower is better) Translates to: CTQSEKKDTLSVRQVLQSSEPEV*VLGLRL Trigger: AAGTCTCAGACCCAGGACCCAGACTTCTGGCTCACT...GGACTGCAGCACCTGTCGAACACTTAGCGTGTCTTTCTTTTCAGATTGTGTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| 3UTR-3UTR CCA 90 bp | TGTACACAATCTGAAAAGAAAGACACGCTAAGTGTTCGACAGGTGCTGCAGTCCTGCTCACACCACTGCTaGCCACCTGGAGAATATGTG | + |
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Preference number: 2 (lower is better) Translates to: CTQSEKKDTLSVRQVLQSCSHHC*PPGEYV Trigger: CACATATTCTCCAGGTGGCCAGCAGTGGTGTGAGCA...GGACTGCAGCACCTGTCGAACACTTAGCGTGTCTTTCTTTTCAGATTGTGTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| 3UTR TCA 72 bp | TGGCGAGTGCAAGGATGGAGAATGTGGGGGTCTAAGTaGGCCAGAAGTCTGGGTCCTGGGTCTGAGACTTCC | + |
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Preference number: 3 (lower is better) Translates to: WRVQGWRMWGSK*ARSLGPGSETS Trigger: GGAAGTCTCAGACCCAGGACCCAGACTTCTGGCTCACTTAGACCCCCACATTCTCCATCCTTGCACTCGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| 3UTR TCA 72 bp | GGGAGACCCAGTTTTCCCAAGCCCCCAGTCTCAGAGTaGAGGTTCCACTGTAAGTCGCTAGACCTTCCTGGG | + |
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Preference number: 3 (lower is better) Translates to: GRPSFPKPPVSE*RFHCKSLDLPG Trigger: CCCAGGAAGGTCTAGCGACTTACAGTGGAACCTTCACTCTGAGACTGGGGGCTTGGGAAAACTGGGTCTCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| 3UTR CCA 72 bp | GAAGTAGTTCAGCTGCTCACACCACTGCTGGCCACCTaGAGAATATGTGTGTGTGTGTGTGTGTGTGTGTGT | + |
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Preference number: 3 (lower is better) Translates to: EVVQLLTPLLAT*RICVCVCVCVC Trigger: ACACACACACACACACACACACACACATATTCTCCAGGTGGCCAGCAGTGGTGTGAGCAGCTGAACTACTTC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| CDS-3UTR GCA 90 bp | CTAAGCCGGGTGAGGGCACACCTTGCACCGTCCTTGTGTCCTCTGGCCAGGCCCGATCCGGGGATCCCCTaGCCCAGGTCCTCCAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: LSRVRAHLAPSLCPLARPDPGIP*PRSSRE Trigger: CTCCCTGGAGGACCTGGGGCAGGGGATCCCCGGATC...GGGCCTGGCCAGAGGACACAAGGACGGTGCAAGGTGTGCCCTCACCCGGCTTAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| CDS-3UTR GCA 90 bp | CTAAGCCGGGTGAGGGCACACCTTGCACCGTCCTTGTGTCCTCTGGCCAGGCCCGTCTGGACCACCCCCTaGACCACCAGCTGCCACCCC | + |
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Preference number: 4 (lower is better) Translates to: LSRVRAHLAPSLCPLARPVWTTP*TTSCHP Trigger: GGGGTGGCAGCTGGTGGTGCAGGGGGTGGTCCAGAC...GGGCCTGGCCAGAGGACACAAGGACGGTGCAAGGTGTGCCCTCACCCGGCTTAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| CDS-3UTR CCA 90 bp | AGGCCTCTAAGGGGCTGGTGGAGGGAACTTCGGGGCACCCTCCCACACAGTGCTCGGCCCACACGATCATaGGAGACGAGGCGGGCGAGC | + |
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Preference number: 4 (lower is better) Translates to: RPLRGWWRELRGTLPHSARPTRS*ETRRAS Trigger: GCTCGCCCGCCTCGTCTCCCATGATCGTGTGGGCCG...AGCACTGTGTGGGAGGGTGCCCCGAAGTTCCCTCCACCAGCCCCTTAGAGGCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026469.9 |
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| CDS-3UTR TCA 90 bp | CTAAGCCGGGTGAGGGCACACCTTGCACCGTCCTTGTGTCCTCTGGCCAGGCCCCTGGGGCACTTGCCTTaGATCTGGGTTGCGGGGTCC | + |
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Preference number: 4 (lower is better) Translates to: LSRVRAHLAPSLCPLARPLGHLP*IWVAGS Trigger: GGACCCCGCAACCCAGATTCAAGGCAAGTGCCCCAG...GGGCCTGGCCAGAGGACACAAGGACGGTGCAAGGTGTGCCCTCACCCGGCTTAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| CDS-3UTR TCA 90 bp | AGGCCTCTAAGGGGCTGGTGGAGGGAACTTCGGGGCACCCTCCCACACAGTGCTCAGGCACACAGGGGCTaGGGCGGCCCACACGATCAT | + |
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Preference number: 4 (lower is better) Translates to: RPLRGWWRELRGTLPHSAQAHRG*GGPHDH Trigger: ATGATCGTGTGGGCCGCCTCAGCCCCTGTGTGCCTG...AGCACTGTGTGGGAGGGTGCCCCGAAGTTCCCTCCACCAGCCCCTTAGAGGCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026469.9 |
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| CDS-3UTR GCA 90 bp | CTAAGCCGGGTGAGGGCACACCTTGCACCGTCCTTGTGTCCTCTGGCCAGGCCCGGCTGCCGTGCCCATTaGTCATGCTCCCTTTCCGGG | + |
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Preference number: 4 (lower is better) Translates to: LSRVRAHLAPSLCPLARPGCRAH*SCSLSG Trigger: CCCGGAAAGGGAGCATGAGCAATGGGCACGGCAGCC...GGGCCTGGCCAGAGGACACAAGGACGGTGCAAGGTGTGCCCTCACCCGGCTTAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| CDS-3UTR TCA 90 bp | CTAAGCCGGGTGAGGGCACACCTTGCACCGTCCTTGTGTCCTCTGGCCAGGCCCCAGGCACTGGTTGGCTaGAGAGCCCTGGATTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: LSRVRAHLAPSLCPLARPQALVG*RALDWW Trigger: CCACCAATCCAGGGCTCTTCAGCCAACCAGTGCCTG...GGGCCTGGCCAGAGGACACAAGGACGGTGCAAGGTGTGCCCTCACCCGGCTTAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| CDS-3UTR CCA 90 bp | AGGCCTCTAAGGGGCTGGTGGAGGGAACTTCGGGGCACCCTCCCACACAGTGCTTGCCCTCCCGCCTTTTaGAGTCCAGGCGGCCGTAGA | + |
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Preference number: 4 (lower is better) Translates to: RPLRGWWRELRGTLPHSACPPAF*SPGGRR Trigger: TCTACGGCCGCCTGGACTCCAAAAGGCGGGAGGGCA...AGCACTGTGTGGGAGGGTGCCCCGAAGTTCCCTCCACCAGCCCCTTAGAGGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| 3UTR CAA 72 bp | CCCCTAAGCCGGGTGAGGGCACACCTTGCACCGTCCTaGTGTCCTCTGGCCAGGCCCCTGCCTGTTATTGCT | + |
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Preference number: 4 (lower is better) Translates to: PLSRVRAHLAPS*CPLARPLPVIA Trigger: AGCAATAACAGGCAGGGGCCTGGCCAGAGGACACAAGGACGGTGCAAGGTGTGCCCTCACCCGGCTTAGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| CDS-3UTR TCA 90 bp | AGGCCTCTAAGGGGCTGGTGGAGGGAACTTCGGGGCACCCTCCCACACAGTGCTGGGCAGCAGCCTCGTTaGTGGTCAGCTCATGCAAGC | + |
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Preference number: 4 (lower is better) Translates to: RPLRGWWRELRGTLPHSAGQQPR*WSAHAS Trigger: GCTTGCATGAGCTGACCATCAACGAGGCTGCTGCCC...AGCACTGTGTGGGAGGGTGCCCCGAAGTTCCCTCCACCAGCCCCTTAGAGGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| CDS-3UTR GCA 90 bp | AGGCCTCTAAGGGGCTGGTGGAGGGAACTTCGGGGCACCCTCCCACACAGTGCTTCTCCTGGGCTGCCGTaGCCATTGCTCATGCTCCCT | + |
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Preference number: 4 (lower is better) Translates to: RPLRGWWRELRGTLPHSASPGLP*PLLMLP Trigger: AGGGAGCATGAGCAATGGGCACGGCAGCCCAGGAGA...AGCACTGTGTGGGAGGGTGCCCCGAAGTTCCCTCCACCAGCCCCTTAGAGGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| CDS-3UTR CCA 90 bp | AGGCCTCTAAGGGGCTGGTGGAGGGAACTTCGGGGCACCCTCCCACACAGTGCTATCCCCTCTGCCAGGTaGCTGTTCCGCTGTGGGAGA | + |
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Preference number: 4 (lower is better) Translates to: RPLRGWWRELRGTLPHSAIPSAR*LFRCGR Trigger: TCTCCCACAGCGGAACAGCCACCTGGCAGAGGGGAT...AGCACTGTGTGGGAGGGTGCCCCGAAGTTCCCTCCACCAGCCCCTTAGAGGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| CDS-3UTR CCA 90 bp | CTAAGCCGGGTGAGGGCACACCTTGCACCGTCCTTGTGTCCTCTGGCCAGGCCCCTCCAGTGTCACCCCTaGGGAAACTCCGGAAGATCC | + |
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Preference number: 4 (lower is better) Translates to: LSRVRAHLAPSLCPLARPLQCHP*GNSGRS Trigger: GGATCTTCCGGAGTTTCCCCAGGGGTGACACTGGAG...GGGCCTGGCCAGAGGACACAAGGACGGTGCAAGGTGTGCCCTCACCCGGCTTAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| CDS-3UTR CCA 90 bp | AGGCCTCTAAGGGGCTGGTGGAGGGAACTTCGGGGCACCCTCCCACACAGTGCTTCTCCCCAGACAGACTaGCGCTGTCCTCCTCTAGGC | + |
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Preference number: 4 (lower is better) Translates to: RPLRGWWRELRGTLPHSASPQTD*RCPPLG Trigger: GCCTAGAGGAGGACAGCGCCAGTCTGTCTGGGGAGA...AGCACTGTGTGGGAGGGTGCCCCGAAGTTCCCTCCACCAGCCCCTTAGAGGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| CDS-3UTR CCA 90 bp | CTAAGCCGGGTGAGGGCACACCTTGCACCGTCCTTGTGTCCTCTGGCCAGGCCCTCGAACTCCTGCAAGTaGCCATCCAGGCTCTCCCCA | + |
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Preference number: 4 (lower is better) Translates to: LSRVRAHLAPSLCPLARPSNSCK*PSRLSP Trigger: TGGGGAGAGCCTGGATGGCCACTTGCAGGAGTTCGA...GGGCCTGGCCAGAGGACACAAGGACGGTGCAAGGTGTGCCCTCACCCGGCTTAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099157.4 |
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| CDS-3UTR GCA 90 bp | CTAAGCCGGGTGAGGGCACACCTTGCACCGTCCTTGTGTCCTCTGGCCAGGCCCGAGTGTTGTCCCTCATaGAGAACTGGGCAGCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: LSRVRAHLAPSLCPLARPECCPS*RTGQQP Trigger: AGGCTGCTGCCCAGTTCTGCATGAGGGACAACACTC...GGGCCTGGCCAGAGGACACAAGGACGGTGCAAGGTGTGCCCTCACCCGGCTTAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| CDS-3UTR CCA 90 bp | CTAAGCCGGGTGAGGGCACACCTTGCACCGTCCTTGTGTCCTCTGGCCAGGCCCAGGTCCTCCAGGGAGTaGCGACAACTTCTCTCCAAG | + |
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Preference number: 4 (lower is better) Translates to: LSRVRAHLAPSLCPLARPRSSRE*RQLLSK Trigger: CTTGGAGAGAAGTTGTCGCCACTCCCTGGAGGACCT...GGGCCTGGCCAGAGGACACAAGGACGGTGCAAGGTGTGCCCTCACCCGGCTTAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| CDS-3UTR CCA 90 bp | AGGCCTCTAAGGGGCTGGTGGAGGGAACTTCGGGGCACCCTCCCACACAGTGCTCTCCAGTGTCACCCCTaGGGAAACTCCGGAAGATCC | + |
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Preference number: 4 (lower is better) Translates to: RPLRGWWRELRGTLPHSALQCHP*GNSGRS Trigger: GGATCTTCCGGAGTTTCCCCAGGGGTGACACTGGAG...AGCACTGTGTGGGAGGGTGCCCCGAAGTTCCCTCCACCAGCCCCTTAGAGGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| CDS-3UTR CCA 90 bp | AGGCCTCTAAGGGGCTGGTGGAGGGAACTTCGGGGCACCCTCCCACACAGTGCTGTCTGCTGCAAGATGTaGCGGCTCCATAGCCCATGC | + |
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Preference number: 4 (lower is better) Translates to: RPLRGWWRELRGTLPHSAVCCKM*RLHSPC Trigger: GCATGGGCTATGGAGCCGCCACATCTTGCAGCAGAC...AGCACTGTGTGGGAGGGTGCCCCGAAGTTCCCTCCACCAGCCCCTTAGAGGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026469.9 |
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| CDS-3UTR TCA 90 bp | GAGTGCAAGGATGGAGAATGTGGGGGTCTAAGTGAGCCAGAAGTCTGGGTCCTGTCCACCAGAGCAGGATaGGGTCCCGGGGCAGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: ECKDGECGGLSEPEVWVLSTRAG*GPGAGQ Trigger: CTGCCCTGCCCCGGGACCTCATCCTGCTCTGGTGGA...CAGGACCCAGACTTCTGGCTCACTTAGACCCCCACATTCTCCATCCTTGCACTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| CDS-3UTR GCA 90 bp | CTAAGCCGGGTGAGGGCACACCTTGCACCGTCCTTGTGTCCTCTGGCCAGGCCCCTCCTCTTCTCCCCCTaGTCCAACATCAGATTCTGG | + |
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Preference number: 4 (lower is better) Translates to: LSRVRAHLAPSLCPLARPLLFSP*SNIRFW Trigger: CCAGAATCTGATGTTGGAGCAGGGGGAGAAGAGGAG...GGGCCTGGCCAGAGGACACAAGGACGGTGCAAGGTGTGCCCTCACCCGGCTTAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| CDS-3UTR GCA 90 bp | CTAAGCCGGGTGAGGGCACACCTTGCACCGTCCTTGTGTCCTCTGGCCAGGCCCCAGCTTCAACAGGGATaGGATCTCTCCAGTGTCACC | + |
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Preference number: 4 (lower is better) Translates to: LSRVRAHLAPSLCPLARPQLQQG*DLSSVT Trigger: GGTGACACTGGAGAGATCGCATCCCTGTTGAAGCTG...GGGCCTGGCCAGAGGACACAAGGACGGTGCAAGGTGTGCCCTCACCCGGCTTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| CDS-3UTR GCA 90 bp | CTAAGCCGGGTGAGGGCACACCTTGCACCGTCCTTGTGTCCTCTGGCCAGGCCCTCATCCATCAGTGTCTaGTGCAAGATGTGGCGGCTC | + |
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Preference number: 4 (lower is better) Translates to: LSRVRAHLAPSLCPLARPSSISV*CKMWRL Trigger: GAGCCGCCACATCTTGCAGCAGACACTGATGGATGA...GGGCCTGGCCAGAGGACACAAGGACGGTGCAAGGTGTGCCCTCACCCGGCTTAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026469.9 |
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| CDS-3UTR CCA 90 bp | CTAAGCCGGGTGAGGGCACACCTTGCACCGTCCTTGTGTCCTCTGGCCAGGCCCTGTAGACGTCGGACATaGAGTGGTTTGGTGGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: LSRVRAHLAPSLCPLARPCRRRT*SGLVAM Trigger: CATGGCCACCAAACCACTCCATGTCCGACGTCTACA...GGGCCTGGCCAGAGGACACAAGGACGGTGCAAGGTGTGCCCTCACCCGGCTTAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
||
| CDS-3UTR CCA 90 bp | AGGCCTCTAAGGGGCTGGTGGAGGGAACTTCGGGGCACCCTCCCACACAGTGCTAGAGCCCTGGATTGGTaGCCCATTCTCTCAGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: RPLRGWWRELRGTLPHSARALDW*PILSEP Trigger: AGGCTCTGAGAGAATGGGCCACCAATCCAGGGCTCT...AGCACTGTGTGGGAGGGTGCCCCGAAGTTCCCTCCACCAGCCCCTTAGAGGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
||
| CDS-3UTR CCA 90 bp | AGGCCTCTAAGGGGCTGGTGGAGGGAACTTCGGGGCACCCTCCCACACAGTGCTACAGCAGGCACTGGTTaGCTGAAGAGCCCTGGATTG | + |
|
Preference number: 4 (lower is better) Translates to: RPLRGWWRELRGTLPHSATAGTG*LKSPGL Trigger: CAATCCAGGGCTCTTCAGCCAACCAGTGCCTGCTGT...AGCACTGTGTGGGAGGGTGCCCCGAAGTTCCCTCCACCAGCCCCTTAGAGGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
||
| CDS-3UTR CCA 90 bp | GAGTGCAAGGATGGAGAATGTGGGGGTCTAAGTGAGCCAGAAGTCTGGGTCCTGTCCTCCCCCTGCAGGTaGGGAGAAAGGGGGAGACCC | + |
|
Preference number: 4 (lower is better) Translates to: ECKDGECGGLSEPEVWVLSSPCR*GERGRP Trigger: GGGTCTCCCCCTTTCTCCCCACCTGCAGGGGGAGGA...CAGGACCCAGACTTCTGGCTCACTTAGACCCCCACATTCTCCATCCTTGCACTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| CDS-3UTR GCA 90 bp | GAGTGCAAGGATGGAGAATGTGGGGGTCTAAGTGAGCCAGAAGTCTGGGTCCTGGGCTGCCGTGCCCATTaGTCATGCTCCCTTTCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: ECKDGECGGLSEPEVWVLGCRAH*SCSLSG Trigger: CCCGGAAAGGGAGCATGAGCAATGGGCACGGCAGCC...CAGGACCCAGACTTCTGGCTCACTTAGACCCCCACATTCTCCATCCTTGCACTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
||
| CDS-3UTR GCA 90 bp | GAGTGCAAGGATGGAGAATGTGGGGGTCTAAGTGAGCCAGAAGTCTGGGTCCTGAGAGACTCCTCCCCCTaGAGGTGGGGAGAAAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: ECKDGECGGLSEPEVWVLRDSSP*RWGERG Trigger: CCCCCTTTCTCCCCACCTGCAGGGGGAGGAGTCTCT...CAGGACCCAGACTTCTGGCTCACTTAGACCCCCACATTCTCCATCCTTGCACTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
||
| CDS-3UTR CCA 90 bp | GAGTGCAAGGATGGAGAATGTGGGGGTCTAAGTGAGCCAGAAGTCTGGGTCCTGGGGCACAGCAGGCACTaGTTGGCTGAAGAGCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ECKDGECGGLSEPEVWVLGHSRH*LAEEPW Trigger: CCAGGGCTCTTCAGCCAACCAGTGCCTGCTGTGCCC...CAGGACCCAGACTTCTGGCTCACTTAGACCCCCACATTCTCCATCCTTGCACTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
||
| CDS-3UTR CCA 90 bp | GAGTGCAAGGATGGAGAATGTGGGGGTCTAAGTGAGCCAGAAGTCTGGGTCCTGGCCCGCCTTTTCTCCTaGGCTGCCGTGCCCATTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ECKDGECGGLSEPEVWVLARLFS*AAVPIA Trigger: AGCAATGGGCACGGCAGCCCAGGAGAAAAGGCGGGC...CAGGACCCAGACTTCTGGCTCACTTAGACCCCCACATTCTCCATCCTTGCACTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
||
| CDS-3UTR TCA 90 bp | AGGCCTCTAAGGGGCTGGTGGAGGGAACTTCGGGGCACCCTCCCACACAGTGCTCTGTCTCAGAGATCTTaGAAAGTGGGATGCTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RPLRGWWRELRGTLPHSALSQRS*KVGCWR Trigger: TCTCCAGCATCCCACTTTTCAAGATCTCTGAGACAG...AGCACTGTGTGGGAGGGTGCCCCGAAGTTCCCTCCACCAGCCCCTTAGAGGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
||
| CDS-3UTR GCA 90 bp | CTTCCTGGGGAAGTTCTTTCTCCGTGTCCAAGTGAAGTAGTTCAGCTGCTCACAGATCCGGGGATCCCCTaGCCCAGGTCCTCCAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LPGEVLSPCPSEVVQLLTDPGIP*PRSSRE Trigger: CTCCCTGGAGGACCTGGGGCAGGGGATCCCCGGATC...TGTGAGCAGCTGAACTACTTCACTTGGACACGGAGAAAGAACTTCCCCAGGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
||
| CDS-3UTR CCA 90 bp | GAGTGCAAGGATGGAGAATGTGGGGGTCTAAGTGAGCCAGAAGTCTGGGTCCTGATCCCCTCTGCCAGGTaGCTGTTCCGCTGTGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: ECKDGECGGLSEPEVWVLIPSAR*LFRCGR Trigger: TCTCCCACAGCGGAACAGCCACCTGGCAGAGGGGAT...CAGGACCCAGACTTCTGGCTCACTTAGACCCCCACATTCTCCATCCTTGCACTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
||
| CDS-3UTR CCA 90 bp | AGGCCTCTAAGGGGCTGGTGGAGGGAACTTCGGGGCACCCTCCCACACAGTGCTCAGTTTCTTCAGTGGTaGGCCTCCCAATTCTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RPLRGWWRELRGTLPHSAQFLQW*ASQFFR Trigger: TCTGAAGAATTGGGAGGCCCACCACTGAAGAAACTG...AGCACTGTGTGGGAGGGTGCCCCGAAGTTCCCTCCACCAGCCCCTTAGAGGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
||
| CDS-3UTR CCA 90 bp | CTAAGCCGGGTGAGGGCACACCTTGCACCGTCCTTGTGTCCTCTGGCCAGGCCCTTTCAGTTTCTTCAGTaGTGGGCCTCCCAATTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LSRVRAHLAPSLCPLARPFQFLQ*WASQFF Trigger: GAAGAATTGGGAGGCCCACCACTGAAGAAACTGAAA...GGGCCTGGCCAGAGGACACAAGGACGGTGCAAGGTGTGCCCTCACCCGGCTTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
||
| CDS-3UTR CCA 90 bp | GAGTGCAAGGATGGAGAATGTGGGGGTCTAAGTGAGCCAGAAGTCTGGGTCCTGTCTCCCCAGACAGACTaGCGCTGTCCTCCTCTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: ECKDGECGGLSEPEVWVLSPQTD*RCPPLG Trigger: GCCTAGAGGAGGACAGCGCCAGTCTGTCTGGGGAGA...CAGGACCCAGACTTCTGGCTCACTTAGACCCCCACATTCTCCATCCTTGCACTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
||
| CDS-3UTR GCA 90 bp | TGTCCAAGTGAAGTAGTTCAGCTGCTCACACCACTGCTGGCCACCTGGAGAATACAGTGTCCGAGGCAGTaGCATGGCTGGGGCACTTGC | + |
|
Preference number: 4 (lower is better) Translates to: CPSEVVQLLTPLLATWRIQCPRQ*HGWGTC Trigger: GCAAGTGCCCCAGCCATGGCACTGCCTCGGACACTG...TATTCTCCAGGTGGCCAGCAGTGGTGTGAGCAGCTGAACTACTTCACTTGGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| CDS-3UTR GCA 90 bp | TGTCCAAGTGAAGTAGTTCAGCTGCTCACACCACTGCTGGCCACCTGGAGAATAAGAGACTCCTCCCCCTaGAGGTGGGGAGAAAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: CPSEVVQLLTPLLATWRIRDSSP*RWGERG Trigger: CCCCCTTTCTCCCCACCTGCAGGGGGAGGAGTCTCT...TATTCTCCAGGTGGCCAGCAGTGGTGTGAGCAGCTGAACTACTTCACTTGGACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| CDS-3UTR GCA 90 bp | CTTCCTGGGGAAGTTCTTTCTCCGTGTCCAAGTGAAGTAGTTCAGCTGCTCACAGGGGCGGTATGGGGGTaGATAGGACTCAGGGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LPGEVLSPCPSEVVQLLTGAVWG*IGLRAW Trigger: CCAGGCCCTGAGTCCTATGCACCCCCATACCGCCCC...TGTGAGCAGCTGAACTACTTCACTTGGACACGGAGAAAGAACTTCCCCAGGAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
||
| CDS-3UTR GCA 90 bp | TGTCCAAGTGAAGTAGTTCAGCTGCTCACACCACTGCTGGCCACCTGGAGAATACACGACCCCACAGCCTaGAAGTGGCCATCCAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: CPSEVVQLLTPLLATWRIHDPTA*KWPSRL Trigger: GAGCCTGGATGGCCACTTGCAGGCTGTGGGGTCGTG...TATTCTCCAGGTGGCCAGCAGTGGTGTGAGCAGCTGAACTACTTCACTTGGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026469.9 |
||
| CDS-3UTR GCA 90 bp | GAGTGCAAGGATGGAGAATGTGGGGGTCTAAGTGAGCCAGAAGTCTGGGTCCTGCTGCCGGCTGGCTTCTaGCTCCACTTTAACGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ECKDGECGGLSEPEVWVLLPAGF*LHFNAA Trigger: AGCAGCGTTAAAGTGGAGGCAGAAGCCAGCCGGCAG...CAGGACCCAGACTTCTGGCTCACTTAGACCCCCACATTCTCCATCCTTGCACTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
||
| CDS-3UTR CCA 90 bp | CTTCCTGGGGAAGTTCTTTCTCCGTGTCCAAGTGAAGTAGTTCAGCTGCTCACATGGAGTGCTCTGGCCTaGCCAGATCCGGGGATCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LPGEVLSPCPSEVVQLLTWSALA*PDPGIP Trigger: GGGGATCCCCGGATCTGGCCAGGCCAGAGCACTCCA...TGTGAGCAGCTGAACTACTTCACTTGGACACGGAGAAAGAACTTCCCCAGGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
||
| CDS-3UTR CCA 90 bp | CTTCCTGGGGAAGTTCTTTCTCCGTGTCCAAGTGAAGTAGTTCAGCTGCTCACATGGTTCCAGGCGGTCTaGACCACCCCCTGCACCACC | + |
|
Preference number: 4 (lower is better) Translates to: LPGEVLSPCPSEVVQLLTWFQAV*TTPCTT Trigger: GGTGGTGCAGGGGGTGGTCCAGACCGCCTGGAACCA...TGTGAGCAGCTGAACTACTTCACTTGGACACGGAGAAAGAACTTCCCCAGGAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| CDS-3UTR TCA 90 bp | TGTCCAAGTGAAGTAGTTCAGCTGCTCACACCACTGCTGGCCACCTGGAGAATACAGGCACTGGTTGGCTaGAGAGCCCTGGATTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: CPSEVVQLLTPLLATWRIQALVG*RALDWW Trigger: CCACCAATCCAGGGCTCTTCAGCCAACCAGTGCCTG...TATTCTCCAGGTGGCCAGCAGTGGTGTGAGCAGCTGAACTACTTCACTTGGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| CDS-3UTR GCA 90 bp | CTTCCTGGGGAAGTTCTTTCTCCGTGTCCAAGTGAAGTAGTTCAGCTGCTCACACAGTGTCCGAGGCAGTaGCATGGCTGGGGCACTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LPGEVLSPCPSEVVQLLTQCPRQ*HGWGTC Trigger: GCAAGTGCCCCAGCCATGGCACTGCCTCGGACACTG...TGTGAGCAGCTGAACTACTTCACTTGGACACGGAGAAAGAACTTCCCCAGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| CDS-3UTR GCA 90 bp | TGTACACAATCTGAAAAGAAAGACACGCTAAGTGTTCGACAGGTGCTGCAGTCCGTCTGGACCACCCCCTaGACCACCAGCTGCCACCCC | + |
|
Preference number: 4 (lower is better) Translates to: CTQSEKKDTLSVRQVLQSVWTTP*TTSCHP Trigger: GGGGTGGCAGCTGGTGGTGCAGGGGGTGGTCCAGAC...GGACTGCAGCACCTGTCGAACACTTAGCGTGTCTTTCTTTTCAGATTGTGTACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| CDS-3UTR GCA 90 bp | TGTCCAAGTGAAGTAGTTCAGCTGCTCACACCACTGCTGGCCACCTGGAGAATATCCATCTCAAAGATGTaGCCCACGCTCCGCGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: CPSEVVQLLTPLLATWRISISKM*PTLRAS Trigger: GCTGGCGCGGAGCGTGGGGCACATCTTTGAGATGGA...TATTCTCCAGGTGGCCAGCAGTGGTGTGAGCAGCTGAACTACTTCACTTGGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| CDS-3UTR CCA 90 bp | GAGTGCAAGGATGGAGAATGTGGGGGTCTAAGTGAGCCAGAAGTCTGGGTCCTGAGTAAGAGAGGAGGTTaGCGCGTTGCAGGACCCGAT | + |
|
Preference number: 4 (lower is better) Translates to: ECKDGECGGLSEPEVWVLSKRGG*RVAGPD Trigger: ATCGGGTCCTGCAACGCGCCAACCTCCTCTCTTACT...CAGGACCCAGACTTCTGGCTCACTTAGACCCCCACATTCTCCATCCTTGCACTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| CDS-3UTR TCA 90 bp | GAGTGCAAGGATGGAGAATGTGGGGGTCTAAGTGAGCCAGAAGTCTGGGTCCTGCTCCTCCCTGCTGGATaGAGGTCTCGTAGTAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: ECKDGECGGLSEPEVWVLLLPAG*RSRSKR Trigger: TCTCTTACTACGAGACCTTCATCCAGCAGGGAGGAG...CAGGACCCAGACTTCTGGCTCACTTAGACCCCCACATTCTCCATCCTTGCACTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| CDS-3UTR GCA 90 bp | TGTCCAAGTGAAGTAGTTCAGCTGCTCACACCACTGCTGGCCACCTGGAGAATAAGGAGGTTGGCGCGTTaGAGGACCCGATACAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: CPSEVVQLLTPLLATWRIRRLAR*RTRYSC Trigger: ACAGCTGTATCGGGTCCTGCAACGCGCCAACCTCCT...TATTCTCCAGGTGGCCAGCAGTGGTGTGAGCAGCTGAACTACTTCACTTGGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| CDS-3UTR GCA 90 bp | TGTCCAAGTGAAGTAGTTCAGCTGCTCACACCACTGCTGGCCACCTGGAGAATACGTGCCCATTGCTCATaGTCCCTTTCCGGGTACCAG | + |
|
Preference number: 4 (lower is better) Translates to: CPSEVVQLLTPLLATWRIRAHCS*SLSGYQ Trigger: CTGGTACCCGGAAAGGGAGCATGAGCAATGGGCACG...TATTCTCCAGGTGGCCAGCAGTGGTGTGAGCAGCTGAACTACTTCACTTGGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| CDS-3UTR GCA 90 bp | TGTCCAAGTGAAGTAGTTCAGCTGCTCACACCACTGCTGGCCACCTGGAGAATACCTTTTCTCCTGGGCTaGCGTGCCCATTGCTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: CPSEVVQLLTPLLATWRIPFLLG*RAHCSC Trigger: GCATGAGCAATGGGCACGGCAGCCCAGGAGAAAAGG...TATTCTCCAGGTGGCCAGCAGTGGTGTGAGCAGCTGAACTACTTCACTTGGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| CDS-3UTR GCA 90 bp | GAGTGCAAGGATGGAGAATGTGGGGGTCTAAGTGAGCCAGAAGTCTGGGTCCTGTCCATCAGTGTCTGCTaGAAGATGTGGCGGCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: ECKDGECGGLSEPEVWVLSISVC*KMWRLH Trigger: ATGGAGCCGCCACATCTTGCAGCAGACACTGATGGA...CAGGACCCAGACTTCTGGCTCACTTAGACCCCCACATTCTCCATCCTTGCACTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026469.9 |
||
| CDS-3UTR GCA 90 bp | TGTCCAAGTGAAGTAGTTCAGCTGCTCACACCACTGCTGGCCACCTGGAGAATACTGCCGGCTGGCTTCTaGCTCCACTTTAACGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: CPSEVVQLLTPLLATWRILPAGF*LHFNAA Trigger: AGCAGCGTTAAAGTGGAGGCAGAAGCCAGCCGGCAG...TATTCTCCAGGTGGCCAGCAGTGGTGTGAGCAGCTGAACTACTTCACTTGGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| CDS-3UTR CCA 90 bp | TGTACACAATCTGAAAAGAAAGACACGCTAAGTGTTCGACAGGTGCTGCAGTCCTGGAGTGCTCTGGCCTaGCCAGATCCGGGGATCCCC | + |
|
Preference number: 4 (lower is better) Translates to: CTQSEKKDTLSVRQVLQSWSALA*PDPGIP Trigger: GGGGATCCCCGGATCTGGCCAGGCCAGAGCACTCCA...GGACTGCAGCACCTGTCGAACACTTAGCGTGTCTTTCTTTTCAGATTGTGTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
||
| CDS-3UTR CCA 90 bp | ACGGGTGGGCAAACTGCAGCACTTGTTAAATTAAAGAAACAAACTAGAAGCACGGGGCGGCGTCAGCCTTaGGCACGACCCCACAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TGGQTAALVKLKKQTRSTGRRQP*ARPHSL Trigger: CAGGCTGTGGGGTCGTGCCCAAGGCTGACGCCGCCC...CGTGCTTCTAGTTTGTTTCTTTAATTTAACAAGTGCTGCAGTTTGCCCACCCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026469.9 |
||
| CDS-3UTR TCA 90 bp | GAGTGCAAGGATGGAGAATGTGGGGGTCTAAGTGAGCCAGAAGTCTGGGTCCTGCCCAATTCTTCAGAGTaGAGCCTGGATCCCTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: ECKDGECGGLSEPEVWVLPNSSE*SLDPFK Trigger: CTTGAAGGGATCCAGGCTTCACTCTGAAGAATTGGG...CAGGACCCAGACTTCTGGCTCACTTAGACCCCCACATTCTCCATCCTTGCACTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
||
| CDS-3UTR TCA 90 bp | ACGGGTGGGCAAACTGCAGCACTTGTTAAATTAAAGAAACAAACTAGAAGCACGTCCACCAGAGCAGGATaGGGTCCCGGGGCAGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TGGQTAALVKLKKQTRSTSTRAG*GPGAGQ Trigger: CTGCCCTGCCCCGGGACCTCATCCTGCTCTGGTGGA...CGTGCTTCTAGTTTGTTTCTTTAATTTAACAAGTGCTGCAGTTTGCCCACCCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
||
| CDS-3UTR GCA 90 bp | CTTCCTGGGGAAGTTCTTTCTCCGTGTCCAAGTGAAGTAGTTCAGCTGCTCACAAGGAGGTTGGCGCGTTaGAGGACCCGATACAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LPGEVLSPCPSEVVQLLTRRLAR*RTRYSC Trigger: ACAGCTGTATCGGGTCCTGCAACGCGCCAACCTCCT...TGTGAGCAGCTGAACTACTTCACTTGGACACGGAGAAAGAACTTCCCCAGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
||
| CDS-3UTR GCA 90 bp | CTTCCTGGGGAAGTTCTTTCTCCGTGTCCAAGTGAAGTAGTTCAGCTGCTCACACCTTTTCTCCTGGGCTaGCGTGCCCATTGCTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: LPGEVLSPCPSEVVQLLTPFLLG*RAHCSC Trigger: GCATGAGCAATGGGCACGGCAGCCCAGGAGAAAAGG...TGTGAGCAGCTGAACTACTTCACTTGGACACGGAGAAAGAACTTCCCCAGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
||
| CDS-3UTR CCA 90 bp | TGTCCAAGTGAAGTAGTTCAGCTGCTCACACCACTGCTGGCCACCTGGAGAATAAGGCAGTGCCATGGCTaGGGCACTTGCCTTGAATCT | + |
|
Preference number: 4 (lower is better) Translates to: CPSEVVQLLTPLLATWRIRQCHG*GTCLES Trigger: AGATTCAAGGCAAGTGCCCCAGCCATGGCACTGCCT...TATTCTCCAGGTGGCCAGCAGTGGTGTGAGCAGCTGAACTACTTCACTTGGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
||
| CDS-3UTR CCA 90 bp | CTTCCTGGGGAAGTTCTTTCTCCGTGTCCAAGTGAAGTAGTTCAGCTGCTCACAACGTCGGACATGGAGTaGTTTGGTGGCCATGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LPGEVLSPCPSEVVQLLTTSDME*FGGHAH Trigger: GTGGGCATGGCCACCAAACCACTCCATGTCCGACGT...TGTGAGCAGCTGAACTACTTCACTTGGACACGGAGAAAGAACTTCCCCAGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
||
| CDS-3UTR CCA 90 bp | TGTCCAAGTGAAGTAGTTCAGCTGCTCACACCACTGCTGGCCACCTGGAGAATAACAGCAGGCACTGGTTaGCTGAAGAGCCCTGGATTG | + |
|
Preference number: 4 (lower is better) Translates to: CPSEVVQLLTPLLATWRITAGTG*LKSPGL Trigger: CAATCCAGGGCTCTTCAGCCAACCAGTGCCTGCTGT...TATTCTCCAGGTGGCCAGCAGTGGTGTGAGCAGCTGAACTACTTCACTTGGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
||
| CDS-3UTR CCA 90 bp | TGTACACAATCTGAAAAGAAAGACACGCTAAGTGTTCGACAGGTGCTGCAGTCCGGGCACAGCAGGCACTaGTTGGCTGAAGAGCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CTQSEKKDTLSVRQVLQSGHSRH*LAEEPW Trigger: CCAGGGCTCTTCAGCCAACCAGTGCCTGCTGTGCCC...GGACTGCAGCACCTGTCGAACACTTAGCGTGTCTTTCTTTTCAGATTGTGTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
||
| CDS-3UTR CCA 90 bp | GAGTGCAAGGATGGAGAATGTGGGGGTCTAAGTGAGCCAGAAGTCTGGGTCCTGAGAGATCTTGAAAAGTaGGATGCTGGAGACGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: ECKDGECGGLSEPEVWVLRDLEK*DAGDGH Trigger: GTGCCCGTCTCCAGCATCCCACTTTTCAAGATCTCT...CAGGACCCAGACTTCTGGCTCACTTAGACCCCCACATTCTCCATCCTTGCACTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
||
| CDS-3UTR CCA 90 bp | TGTACACAATCTGAAAAGAAAGACACGCTAAGTGTTCGACAGGTGCTGCAGTCCGCCCGCCTTTTCTCCTaGGCTGCCGTGCCCATTGCT | + |
|
Preference number: 4 (lower is better) Translates to: CTQSEKKDTLSVRQVLQSARLFS*AAVPIA Trigger: AGCAATGGGCACGGCAGCCCAGGAGAAAAGGCGGGC...GGACTGCAGCACCTGTCGAACACTTAGCGTGTCTTTCTTTTCAGATTGTGTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
||
| CDS-3UTR CCA 90 bp | TGTCCAAGTGAAGTAGTTCAGCTGCTCACACCACTGCTGGCCACCTGGAGAATAATAGGACTCAGGGCCTaGAGGAGGCTGCTGGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: CPSEVVQLLTPLLATWRIIGLRA*RRLLDF Trigger: GAAATCCAGCAGCCTCCTCCAGGCCCTGAGTCCTAT...TATTCTCCAGGTGGCCAGCAGTGGTGTGAGCAGCTGAACTACTTCACTTGGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
||
| CDS-3UTR TCA 90 bp | TGTACACAATCTGAAAAGAAAGACACGCTAAGTGTTCGACAGGTGCTGCAGTCCGGGCAGCAGCCTCGTTaGTGGTCAGCTCATGCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: CTQSEKKDTLSVRQVLQSGQQPR*WSAHAS Trigger: GCTTGCATGAGCTGACCATCAACGAGGCTGCTGCCC...GGACTGCAGCACCTGTCGAACACTTAGCGTGTCTTTCTTTTCAGATTGTGTACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
||
| CDS-3UTR GCA 90 bp | TGTACACAATCTGAAAAGAAAGACACGCTAAGTGTTCGACAGGTGCTGCAGTCCTCTCCTGGGCTGCCGTaGCCATTGCTCATGCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: CTQSEKKDTLSVRQVLQSSPGLP*PLLMLP Trigger: AGGGAGCATGAGCAATGGGCACGGCAGCCCAGGAGA...GGACTGCAGCACCTGTCGAACACTTAGCGTGTCTTTCTTTTCAGATTGTGTACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
||
| CDS-3UTR GCA 90 bp | CTTCCTGGGGAAGTTCTTTCTCCGTGTCCAAGTGAAGTAGTTCAGCTGCTCACAGAGTGTTGTCCCTCATaGAGAACTGGGCAGCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LPGEVLSPCPSEVVQLLTECCPS*RTGQQP Trigger: AGGCTGCTGCCCAGTTCTGCATGAGGGACAACACTC...TGTGAGCAGCTGAACTACTTCACTTGGACACGGAGAAAGAACTTCCCCAGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
||
| CDS-3UTR GCA 90 bp | ACGGGTGGGCAAACTGCAGCACTTGTTAAATTAAAGAAACAAACTAGAAGCACGGGGGCGGTATGGGGGTaGATAGGACTCAGGGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TGGQTAALVKLKKQTRSTGAVWG*IGLRAW Trigger: CCAGGCCCTGAGTCCTATGCACCCCCATACCGCCCC...CGTGCTTCTAGTTTGTTTCTTTAATTTAACAAGTGCTGCAGTTTGCCCACCCGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
||
| CDS-3UTR GCA 90 bp | ACGGGTGGGCAAACTGCAGCACTTGTTAAATTAAAGAAACAAACTAGAAGCACGCCCATGCGCTGGCAATaGCAGGGGCAGGTCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TGGQTAALVKLKKQTRSTPMRWQ*QGQVSR Trigger: CCTGCTGACCTGCCCCTGGCATTGCCAGCGCATGGG...CGTGCTTCTAGTTTGTTTCTTTAATTTAACAAGTGCTGCAGTTTGCCCACCCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026469.9 |
||
| CDS-3UTR CCA 90 bp | TGTCCAAGTGAAGTAGTTCAGCTGCTCACACCACTGCTGGCCACCTGGAGAATATGTAGACGTCGGACATaGAGTGGTTTGGTGGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: CPSEVVQLLTPLLATWRICRRRT*SGLVAM Trigger: CATGGCCACCAAACCACTCCATGTCCGACGTCTACA...TATTCTCCAGGTGGCCAGCAGTGGTGTGAGCAGCTGAACTACTTCACTTGGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
||
| CDS-3UTR CCA 90 bp | TGTCCAAGTGAAGTAGTTCAGCTGCTCACACCACTGCTGGCCACCTGGAGAATATTGGCTGAAGAGCCCTaGATTGGTGGCCCATTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: CPSEVVQLLTPLLATWRILAEEP*IGGPFS Trigger: AGAGAATGGGCCACCAATCCAGGGCTCTTCAGCCAA...TATTCTCCAGGTGGCCAGCAGTGGTGTGAGCAGCTGAACTACTTCACTTGGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
||
| CDS-3UTR CCA 90 bp | TGTACACAATCTGAAAAGAAAGACACGCTAAGTGTTCGACAGGTGCTGCAGTCCGATTCTGGAGTGCTCTaGCCTGGCCAGATCCGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: CTQSEKKDTLSVRQVLQSDSGVL*PGQIRG Trigger: TCCCCGGATCTGGCCAGGCCAGAGCACTCCAGAATC...GGACTGCAGCACCTGTCGAACACTTAGCGTGTCTTTCTTTTCAGATTGTGTACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
||
| CDS-3UTR CCA 90 bp | ACGGGTGGGCAAACTGCAGCACTTGTTAAATTAAAGAAACAAACTAGAAGCACGTCCTCCCCCTGCAGGTaGGGAGAAAGGGGGAGACCC | + |
|
Preference number: 4 (lower is better) Translates to: TGGQTAALVKLKKQTRSTSSPCR*GERGRP Trigger: GGGTCTCCCCCTTTCTCCCCACCTGCAGGGGGAGGA...CGTGCTTCTAGTTTGTTTCTTTAATTTAACAAGTGCTGCAGTTTGCCCACCCGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
||
| CDS-3UTR CCA 90 bp | ACGGGTGGGCAAACTGCAGCACTTGTTAAATTAAAGAAACAAACTAGAAGCACGTGGTTCCAGGCGGTCTaGACCACCCCCTGCACCACC | + |
|
Preference number: 4 (lower is better) Translates to: TGGQTAALVKLKKQTRSTWFQAV*TTPCTT Trigger: GGTGGTGCAGGGGGTGGTCCAGACCGCCTGGAACCA...CGTGCTTCTAGTTTGTTTCTTTAATTTAACAAGTGCTGCAGTTTGCCCACCCGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
||
| CDS-3UTR CCA 90 bp | TGTACACAATCTGAAAAGAAAGACACGCTAAGTGTTCGACAGGTGCTGCAGTCCTGTCCTCCTCTAGGCTaGGGCGGTATGGGGGTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: CTQSEKKDTLSVRQVLQSCPPLG*GGMGVH Trigger: ATGCACCCCCATACCGCCCCAGCCTAGAGGAGGACA...GGACTGCAGCACCTGTCGAACACTTAGCGTGTCTTTCTTTTCAGATTGTGTACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
||
| CDS-3UTR TCA 90 bp | CTTCCTGGGGAAGTTCTTTCTCCGTGTCCAAGTGAAGTAGTTCAGCTGCTCACATCCTTCTGGGCGTCATaGTCGTCCATCTCAAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: LPGEVLSPCPSEVVQLLTSFWAS*SSISKM Trigger: CATCTTTGAGATGGACGATCATGACGCCCAGAAGGA...TGTGAGCAGCTGAACTACTTCACTTGGACACGGAGAAAGAACTTCCCCAGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
||
| CDS-3UTR CCA 90 bp | TGTACACAATCTGAAAAGAAAGACACGCTAAGTGTTCGACAGGTGCTGCAGTCCAGAGCCCTGGATTGGTaGCCCATTCTCTCAGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: CTQSEKKDTLSVRQVLQSRALDW*PILSEP Trigger: AGGCTCTGAGAGAATGGGCCACCAATCCAGGGCTCT...GGACTGCAGCACCTGTCGAACACTTAGCGTGTCTTTCTTTTCAGATTGTGTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
||
| CDS-3UTR CCA 90 bp | ACGGGTGGGCAAACTGCAGCACTTGTTAAATTAAAGAAACAAACTAGAAGCACGGATTCTGGAGTGCTCTaGCCTGGCCAGATCCGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TGGQTAALVKLKKQTRSTDSGVL*PGQIRG Trigger: TCCCCGGATCTGGCCAGGCCAGAGCACTCCAGAATC...CGTGCTTCTAGTTTGTTTCTTTAATTTAACAAGTGCTGCAGTTTGCCCACCCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
||
| CDS-3UTR CCA 90 bp | TGTCCAAGTGAAGTAGTTCAGCTGCTCACACCACTGCTGGCCACCTGGAGAATACAGTTTCTTCAGTGGTaGGCCTCCCAATTCTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: CPSEVVQLLTPLLATWRIQFLQW*ASQFFR Trigger: TCTGAAGAATTGGGAGGCCCACCACTGAAGAAACTG...TATTCTCCAGGTGGCCAGCAGTGGTGTGAGCAGCTGAACTACTTCACTTGGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
||
| CDS-3UTR CCA 90 bp | TGTACACAATCTGAAAAGAAAGACACGCTAAGTGTTCGACAGGTGCTGCAGTCCATAGGACTCAGGGCCTaGAGGAGGCTGCTGGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: CTQSEKKDTLSVRQVLQSIGLRA*RRLLDF Trigger: GAAATCCAGCAGCCTCCTCCAGGCCCTGAGTCCTAT...GGACTGCAGCACCTGTCGAACACTTAGCGTGTCTTTCTTTTCAGATTGTGTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
||
| CDS-3UTR CCA 90 bp | ACGGGTGGGCAAACTGCAGCACTTGTTAAATTAAAGAAACAAACTAGAAGCACGTGTCCTCCTCTAGGCTaGGGCGGTATGGGGGTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: TGGQTAALVKLKKQTRSTCPPLG*GGMGVH Trigger: ATGCACCCCCATACCGCCCCAGCCTAGAGGAGGACA...CGTGCTTCTAGTTTGTTTCTTTAATTTAACAAGTGCTGCAGTTTGCCCACCCGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
||
| CDS-3UTR GCA 90 bp | CTTCCTGGGGAAGTTCTTTCTCCGTGTCCAAGTGAAGTAGTTCAGCTGCTCACAAGGAAGAAAGATAGGTaGTCTCTCGGGCTACTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LPGEVLSPCPSEVVQLLTRKKDR*SLGLLV Trigger: GACAAGTAGCCCGAGAGAGCACCTATCTTTCTTCCT...TGTGAGCAGCTGAACTACTTCACTTGGACACGGAGAAAGAACTTCCCCAGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
||
| CDS-3UTR CCA 90 bp | TGTACACAATCTGAAAAGAAAGACACGCTAAGTGTTCGACAGGTGCTGCAGTCCAGAGATCTTGAAAAGTaGGATGCTGGAGACGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: CTQSEKKDTLSVRQVLQSRDLEK*DAGDGH Trigger: GTGCCCGTCTCCAGCATCCCACTTTTCAAGATCTCT...GGACTGCAGCACCTGTCGAACACTTAGCGTGTCTTTCTTTTCAGATTGTGTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| CDS-3UTR CCA 90 bp | ACGGGTGGGCAAACTGCAGCACTTGTTAAATTAAAGAAACAAACTAGAAGCACGAGGTCCTCCAGGGAGTaGCGACAACTTCTCTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: TGGQTAALVKLKKQTRSTRSSRE*RQLLSK Trigger: CTTGGAGAGAAGTTGTCGCCACTCCCTGGAGGACCT...CGTGCTTCTAGTTTGTTTCTTTAATTTAACAAGTGCTGCAGTTTGCCCACCCGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
||
| CDS-3UTR GCA 90 bp | ACGGGTGGGCAAACTGCAGCACTTGTTAAATTAAAGAAACAAACTAGAAGCACGCTCCTCTTCTCCCCCTaGTCCAACATCAGATTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TGGQTAALVKLKKQTRSTLLFSP*SNIRFW Trigger: CCAGAATCTGATGTTGGAGCAGGGGGAGAAGAGGAG...CGTGCTTCTAGTTTGTTTCTTTAATTTAACAAGTGCTGCAGTTTGCCCACCCGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| CDS-3UTR GCA 90 bp | ACGGGTGGGCAAACTGCAGCACTTGTTAAATTAAAGAAACAAACTAGAAGCACGCAGCTTCAACAGGGATaGGATCTCTCCAGTGTCACC | + |
|
Preference number: 4 (lower is better) Translates to: TGGQTAALVKLKKQTRSTQLQQG*DLSSVT Trigger: GGTGACACTGGAGAGATCGCATCCCTGTTGAAGCTG...CGTGCTTCTAGTTTGTTTCTTTAATTTAACAAGTGCTGCAGTTTGCCCACCCGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
||
| CDS-3UTR GCA 90 bp | TGTACACAATCTGAAAAGAAAGACACGCTAAGTGTTCGACAGGTGCTGCAGTCCAGGAAGAAAGATAGGTaGTCTCTCGGGCTACTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: CTQSEKKDTLSVRQVLQSRKKDR*SLGLLV Trigger: GACAAGTAGCCCGAGAGAGCACCTATCTTTCTTCCT...GGACTGCAGCACCTGTCGAACACTTAGCGTGTCTTTCTTTTCAGATTGTGTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| CDS-3UTR CCA 90 bp | ACGGGTGGGCAAACTGCAGCACTTGTTAAATTAAAGAAACAAACTAGAAGCACGTTGGCTGAAGAGCCCTaGATTGGTGGCCCATTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TGGQTAALVKLKKQTRSTLAEEP*IGGPFS Trigger: AGAGAATGGGCCACCAATCCAGGGCTCTTCAGCCAA...CGTGCTTCTAGTTTGTTTCTTTAATTTAACAAGTGCTGCAGTTTGCCCACCCGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| CDS-3UTR TCA 90 bp | ACGGGTGGGCAAACTGCAGCACTTGTTAAATTAAAGAAACAAACTAGAAGCACGCCCAATTCTTCAGAGTaGAGCCTGGATCCCTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: TGGQTAALVKLKKQTRSTPNSSE*SLDPFK Trigger: CTTGAAGGGATCCAGGCTTCACTCTGAAGAATTGGG...CGTGCTTCTAGTTTGTTTCTTTAATTTAACAAGTGCTGCAGTTTGCCCACCCGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| CDS-3UTR CCA 90 bp | TGTACACAATCTGAAAAGAAAGACACGCTAAGTGTTCGACAGGTGCTGCAGTCCTTTCAGTTTCTTCAGTaGTGGGCCTCCCAATTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CTQSEKKDTLSVRQVLQSFQFLQ*WASQFF Trigger: GAAGAATTGGGAGGCCCACCACTGAAGAAACTGAAA...GGACTGCAGCACCTGTCGAACACTTAGCGTGTCTTTCTTTTCAGATTGTGTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| CDS TCA 90 bp | CCTCCTCGAACTCTGCGAGAGGCGGCTTCGCAGGCACACAGGGGCTaGGGCGGCCCACACGATCATGGGAGACGAGGCGGGCGAGCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: PPRTLREAASQAHRG*GGPHDHGRRGGRAA Trigger: TGCGGCTCGCCCGCCTCGTCTCCCATGATCGTGTGGGCCGCCTCAGCCCCTGTGTGCCTGCGAAGCCGCCTCTCGCAGAGTTCGAGGAGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026469.9 |
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| CDS CCA 90 bp | GGCGGCTTCGCAGGCACACAGGGGCTGAGGCGGCCCACACGATCATaGGAGACGAGGCGGGCGAGCCGCAGCCCCTCATCCATCAGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: GGFAGTQGLRRPTRS*ETRRASRSPSSISV Trigger: GACACTGATGGATGAGGGGCTGCGGCTCGCCCGCCTCGTCTCCCATGATCGTGTGGGCCGCCTCAGCCCCTGTGTGCCTGCGAAGCCGCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026469.9 |
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| CDS-3UTR CAA 90 bp | CTAAGCCGGGTGAGGGCACACCTTGCACCGTCCTTGTGTCCTCTGGCCAGGCCCGGGGCGGCGTCAGCCTaGGGCACGACCCCACAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LSRVRAHLAPSLCPLARPGAASA*GTTPQP Trigger: AGGCTGTGGGGTCGTGCCCAAGGCTGACGCCGCCCC...GGGCCTGGCCAGAGGACACAAGGACGGTGCAAGGTGTGCCCTCACCCGGCTTAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026469.9 |
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| CDS TCA 90 bp | GCCTCCACTTTAACGCTGCTCCTGCGGCCCTCCACCAGAGCAGGATaGGGTCCCGGGGCAGGGCAGCGGTCCAGCAACCCCTCCTCGAAC | + |
|
Preference number: 5 (lower is better) Translates to: ASTLTLLLRPSTRAG*GPGAGQRSSNPSSN Trigger: GTTCGAGGAGGGGTTGCTGGACCGCTGCCCTGCCCCGGGACCTCATCCTGCTCTGGTGGAGGGCCGCAGGAGCAGCGTTAAAGTGGAGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| CDS GCA 90 bp | GAGACGAGGCGGGCGAGCCGCAGCCCCTCATCCATCAGTGTCTGCTaGAAGATGTGGCGGCTCCATAGCCCATGCGCTGGCAATGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: ETRRASRSPSSISVC*KMWRLHSPCAGNAR Trigger: CCTGGCATTGCCAGCGCATGGGCTATGGAGCCGCCACATCTTGCAGCAGACACTGATGGATGAGGGGCTGCGGCTCGCCCGCCTCGTCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026469.9 |
||
| CDS GCA 90 bp | TGGGAGACGAGGCGGGCGAGCCGCAGCCCCTCATCCATCAGTGTCTaGTGCAAGATGTGGCGGCTCCATAGCCCATGCGCTGGCAATGCC | + |
|
Preference number: 5 (lower is better) Translates to: WETRRASRSPSSISV*CKMWRLHSPCAGNA Trigger: GGCATTGCCAGCGCATGGGCTATGGAGCCGCCACATCTTGCAGCAGACACTGATGGATGAGGGGCTGCGGCTCGCCCGCCTCGTCTCCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026469.9 |
||
| CDS CCA 90 bp | CATCCAGGCTCTCCCCAGACAGACTGGCGCTGTCCTCCTCTAGGCTaGGGCGGTATGGGGGTGCATAGGACTCAGGGCCTGGAGGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: HPGSPQTDWRCPPLG*GGMGVHRTQGLEEA Trigger: AGCCTCCTCCAGGCCCTGAGTCCTATGCACCCCCATACCGCCCCAGCCTAGAGGAGGACAGCGCCAGTCTGTCTGGGGAGAGCCTGGATG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
||
| CDS-3UTR CAA 90 bp | CTAAGCCGGGTGAGGGCACACCTTGCACCGTCCTTGTGTCCTCTGGCCAGGCCCGCTGGGGCACTTGCCTaGAATCTGGGTTGCGGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LSRVRAHLAPSLCPLARPAGALA*NLGCGV Trigger: GACCCCGCAACCCAGATTCAAGGCAAGTGCCCCAGC...GGGCCTGGCCAGAGGACACAAGGACGGTGCAAGGTGTGCCCTCACCCGGCTTAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
||
| CDS-3UTR CAA 90 bp | CTAAGCCGGGTGAGGGCACACCTTGCACCGTCCTTGTGTCCTCTGGCCAGGCCCGAGGAGGTTGGCGCGTaGCAGGACCCGATACAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LSRVRAHLAPSLCPLARPEEVGA*QDPIQL Trigger: CAGCTGTATCGGGTCCTGCAACGCGCCAACCTCCTC...GGGCCTGGCCAGAGGACACAAGGACGGTGCAAGGTGTGCCCTCACCCGGCTTAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
||
| CDS GCA 90 bp | TCATCCATCAGTGTCTGCTGCAAGATGTGGCGGCTCCATAGCCCATaGGCTGGCAATGCCAGGGGCAGGTCAGCAGGGGGCGGCGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SSISVCCKMWRLHSP*AGNARGRSAGGGVS Trigger: GCTGACGCCGCCCCCTGCTGACCTGCCCCTGGCATTGCCAGCGCATGGGCTATGGAGCCGCCACATCTTGCAGCAGACACTGATGGATGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026469.9 |
||
| CDS CCA 90 bp | GGGACTCTTGGGGCTAAAGCTTCGAGCACTGCCCGCCTTTTCTCCTaGGCTGCCGTGCCCATTGCTCATGCTCCCTTTCCGGGTACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GTLGAKASSTARLFS*AAVPIAHAPFPGTS Trigger: GCTGGTACCCGGAAAGGGAGCATGAGCAATGGGCACGGCAGCCCAGGAGAAAAGGCGGGCAGTGCTCGAAGCTTTAGCCCCAAGAGTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
||
| CDS-3UTR CAA 90 bp | AGGCCTCTAAGGGGCTGGTGGAGGGAACTTCGGGGCACCCTCCCACACAGTGCTTGGGCAGCAGCCTCGTaGATGGTCAGCTCATGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: RPLRGWWRELRGTLPHSAWAAAS*MVSSCK Trigger: CTTGCATGAGCTGACCATCAACGAGGCTGCTGCCCA...AGCACTGTGTGGGAGGGTGCCCCGAAGTTCCCTCCACCAGCCCCTTAGAGGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
||
| CDS GCA 90 bp | ATCAGATTCTGGAGTGCTCTGGCCTGGCCAGATCCGGGGATCCCCTaGCCCAGGTCCTCCAGGGAGTGGCGACAACTTCTCTCCAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: IRFWSALAWPDPGIP*PRSSREWRQLLSKF Trigger: GAACTTGGAGAGAAGTTGTCGCCACTCCCTGGAGGACCTGGGGCAGGGGATCCCCGGATCTGGCCAGGCCAGAGCACTCCAGAATCTGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
||
| CDS-3UTR CAA 90 bp | AGGCCTCTAAGGGGCTGGTGGAGGGAACTTCGGGGCACCCTCCCACACAGTGCTTGCAAGCTAAGCTGTTaGCCCTCCCGCCTTTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: RPLRGWWRELRGTLPHSACKLSC*PSRLLE Trigger: CTCCAAAAGGCGGGAGGGCAAACAGCTTAGCTTGCA...AGCACTGTGTGGGAGGGTGCCCCGAAGTTCCCTCCACCAGCCCCTTAGAGGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
||
| CDS-3UTR CAA 90 bp | CTAAGCCGGGTGAGGGCACACCTTGCACCGTCCTTGTGTCCTCTGGCCAGGCCCCGCAGTAAAAGAGTGTaGTCCCTCATGCAGAACTGG | + |
|
Preference number: 5 (lower is better) Translates to: LSRVRAHLAPSLCPLARPRSKRV*SLMQNW Trigger: CCAGTTCTGCATGAGGGACAACACTCTTTTACTGCG...GGGCCTGGCCAGAGGACACAAGGACGGTGCAAGGTGTGCCCTCACCCGGCTTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
||
| CDS TCA 90 bp | CGCCAGCCTCACACAGCTGCTGTACATCATCTCCTCCCTGCTGGATaGAGGTCTCGTAGTAAGAGAGGAGGTTGGCGCGTTGCAGGACCC | + |
|
Preference number: 5 (lower is better) Translates to: RQPHTAAVHHLLPAG*RSRSKRGGWRVAGP Trigger: GGGTCCTGCAACGCGCCAACCTCCTCTCTTACTACGAGACCTTCATCCAGCAGGGAGGAGATGATGTACAGCAGCTGTGTGAGGCTGGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 ENSMUST00000128780.2 ENSMUST00000129252.2 |
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| CDS-3UTR CAA 90 bp | GAGTGCAAGGATGGAGAATGTGGGGGTCTAAGTGAGCCAGAAGTCTGGGTCCTGCGGACATGGAGTGGTTaGGTGGCCATGCCCACGAGT | + |
|
Preference number: 5 (lower is better) Translates to: ECKDGECGGLSEPEVWVLRTWSG*VAMPTS Trigger: ACTCGTGGGCATGGCCACCAAACCACTCCATGTCCG...CAGGACCCAGACTTCTGGCTCACTTAGACCCCCACATTCTCCATCCTTGCACTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| CDS CCA 90 bp | AGAGATCTTGAAAAGTGGGATGCTGGAGACGGGCACAGCAGGCACTaGTTGGCTGAAGAGCCCTGGATTGGTGGCCCATTCTCTCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: RDLEKWDAGDGHSRH*LAEEPWIGGPFSQS Trigger: GCTCTGAGAGAATGGGCCACCAATCCAGGGCTCTTCAGCCAACCAGTGCCTGCTGTGCCCGTCTCCAGCATCCCACTTTTCAAGATCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| CDS-3UTR CAA 90 bp | GAGTGCAAGGATGGAGAATGTGGGGGTCTAAGTGAGCCAGAAGTCTGGGTCCTGCACAGCAGGCACTGGTaGGCTGAAGAGCCCTGGATT | + |
|
Preference number: 5 (lower is better) Translates to: ECKDGECGGLSEPEVWVLHSRHW*AEEPWI Trigger: AATCCAGGGCTCTTCAGCCAACCAGTGCCTGCTGTG...CAGGACCCAGACTTCTGGCTCACTTAGACCCCCACATTCTCCATCCTTGCACTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| CDS-3UTR CAA 90 bp | CTTCCTGGGGAAGTTCTTTCTCCGTGTCCAAGTGAAGTAGTTCAGCTGCTCACAGGGCTGCCGTGCCCATaGCTCATGCTCCCTTTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: LPGEVLSPCPSEVVQLLTGLPCP*LMLPFR Trigger: CCGGAAAGGGAGCATGAGCAATGGGCACGGCAGCCC...TGTGAGCAGCTGAACTACTTCACTTGGACACGGAGAAAGAACTTCCCCAGGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| CDS-3UTR CAA 90 bp | AGGCCTCTAAGGGGCTGGTGGAGGGAACTTCGGGGCACCCTCCCACACAGTGCTCTGTTCTCCAACCTCTaGTTTCAGTTTCTTCAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: RPLRGWWRELRGTLPHSALFSNL*FQFLQW Trigger: CCACTGAAGAAACTGAAACAAGAGGTTGGAGAACAG...AGCACTGTGTGGGAGGGTGCCCCGAAGTTCCCTCCACCAGCCCCTTAGAGGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| CDS-3UTR CAA 90 bp | TGTACACAATCTGAAAAGAAAGACACGCTAAGTGTTCGACAGGTGCTGCAGTCCGGGCTGCCGTGCCCATaGCTCATGCTCCCTTTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: CTQSEKKDTLSVRQVLQSGLPCP*LMLPFR Trigger: CCGGAAAGGGAGCATGAGCAATGGGCACGGCAGCCC...GGACTGCAGCACCTGTCGAACACTTAGCGTGTCTTTCTTTTCAGATTGTGTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| CDS-3UTR CAA 90 bp | TGTACACAATCTGAAAAGAAAGACACGCTAAGTGTTCGACAGGTGCTGCAGTCCGCTGGGGCACTTGCCTaGAATCTGGGTTGCGGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: CTQSEKKDTLSVRQVLQSAGALA*NLGCGV Trigger: GACCCCGCAACCCAGATTCAAGGCAAGTGCCCCAGC...GGACTGCAGCACCTGTCGAACACTTAGCGTGTCTTTCTTTTCAGATTGTGTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| CDS-3UTR CAA 90 bp | TGTACACAATCTGAAAAGAAAGACACGCTAAGTGTTCGACAGGTGCTGCAGTCCGAGGAGGTTGGCGCGTaGCAGGACCCGATACAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: CTQSEKKDTLSVRQVLQSEEVGA*QDPIQL Trigger: CAGCTGTATCGGGTCCTGCAACGCGCCAACCTCCTC...GGACTGCAGCACCTGTCGAACACTTAGCGTGTCTTTCTTTTCAGATTGTGTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| CDS-3UTR CAA 90 bp | CTTCCTGGGGAAGTTCTTTCTCCGTGTCCAAGTGAAGTAGTTCAGCTGCTCACATGGGCAGCAGCCTCGTaGATGGTCAGCTCATGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: LPGEVLSPCPSEVVQLLTWAAAS*MVSSCK Trigger: CTTGCATGAGCTGACCATCAACGAGGCTGCTGCCCA...TGTGAGCAGCTGAACTACTTCACTTGGACACGGAGAAAGAACTTCCCCAGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| CDS-3UTR CAA 90 bp | CTTCCTGGGGAAGTTCTTTCTCCGTGTCCAAGTGAAGTAGTTCAGCTGCTCACACTGAAGAGCCCTGGATaGGTGGCCCATTCTCTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LPGEVLSPCPSEVVQLLTLKSPG*VAHSLR Trigger: TCTGAGAGAATGGGCCACCAATCCAGGGCTCTTCAG...TGTGAGCAGCTGAACTACTTCACTTGGACACGGAGAAAGAACTTCCCCAGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
||
| CDS CCA 90 bp | AGTTCTACCCTTCGCAGTAAAAGAGTGTTGTCCCTCATGCAGAACTaGGCAGCAGCCTCGTTGATGGTCAGCTCATGCAAGCTAAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SSTLRSKRVLSLMQN*AAASLMVSSCKLSC Trigger: ACAGCTTAGCTTGCATGAGCTGACCATCAACGAGGCTGCTGCCCAGTTCTGCATGAGGGACAACACTCTTTTACTGCGAAGGGTAGAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| CDS-3UTR CAA 90 bp | TGTCCAAGTGAAGTAGTTCAGCTGCTCACACCACTGCTGGCCACCTGGAGAATAGCTGTCTCAGAGATCTaGAAAAGTGGGATGCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: CPSEVVQLLTPLLATWRIAVSEI*KSGMLE Trigger: CTCCAGCATCCCACTTTTCAAGATCTCTGAGACAGC...TATTCTCCAGGTGGCCAGCAGTGGTGTGAGCAGCTGAACTACTTCACTTGGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| CDS GCA 90 bp | ATTCTTCAGAGTGAAGCCTGGATCCCTTCAAGGAAGAAAGATAGGTaGTCTCTCGGGCTACTTGTCGGGACAGTGAGAAGAGTTCTACCC | + |
|
Preference number: 5 (lower is better) Translates to: ILQSEAWIPSRKKDR*SLGLLVGTVRRVLP Trigger: GGGTAGAACTCTTCTCACTGTCCCGACAAGTAGCCCGAGAGAGCACCTATCTTTCTTCCTTGAAGGGATCCAGGCTTCACTCTGAAGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| CDS-3UTR CAA 90 bp | TGTACACAATCTGAAAAGAAAGACACGCTAAGTGTTCGACAGGTGCTGCAGTCCCTGAAGAGCCCTGGATaGGTGGCCCATTCTCTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: CTQSEKKDTLSVRQVLQSLKSPG*VAHSLR Trigger: TCTGAGAGAATGGGCCACCAATCCAGGGCTCTTCAG...GGACTGCAGCACCTGTCGAACACTTAGCGTGTCTTTCTTTTCAGATTGTGTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| CDS-3UTR CAA 90 bp | CTTCCTGGGGAAGTTCTTTCTCCGTGTCCAAGTGAAGTAGTTCAGCTGCTCACAGCTGTCTCAGAGATCTaGAAAAGTGGGATGCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LPGEVLSPCPSEVVQLLTAVSEI*KSGMLE Trigger: CTCCAGCATCCCACTTTTCAAGATCTCTGAGACAGC...TGTGAGCAGCTGAACTACTTCACTTGGACACGGAGAAAGAACTTCCCCAGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| CDS-3UTR CAA 90 bp | CTTCCTGGGGAAGTTCTTTCTCCGTGTCCAAGTGAAGTAGTTCAGCTGCTCACACGCAGTAAAAGAGTGTaGTCCCTCATGCAGAACTGG | + |
|
Preference number: 5 (lower is better) Translates to: LPGEVLSPCPSEVVQLLTRSKRV*SLMQNW Trigger: CCAGTTCTGCATGAGGGACAACACTCTTTTACTGCG...TGTGAGCAGCTGAACTACTTCACTTGGACACGGAGAAAGAACTTCCCCAGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| CDS-3UTR CAA 90 bp | ACGGGTGGGCAAACTGCAGCACTTGTTAAATTAAAGAAACAAACTAGAAGCACGCACAGCAGGCACTGGTaGGCTGAAGAGCCCTGGATT | + |
|
Preference number: 5 (lower is better) Translates to: TGGQTAALVKLKKQTRSTHSRHW*AEEPWI Trigger: AATCCAGGGCTCTTCAGCCAACCAGTGCCTGCTGTG...CGTGCTTCTAGTTTGTTTCTTTAATTTAACAAGTGCTGCAGTTTGCCCACCCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| CDS-3UTR CAA 90 bp | ACGGGTGGGCAAACTGCAGCACTTGTTAAATTAAAGAAACAAACTAGAAGCACGTGCAAGCTAAGCTGTTaGCCCTCCCGCCTTTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: TGGQTAALVKLKKQTRSTCKLSC*PSRLLE Trigger: CTCCAAAAGGCGGGAGGGCAAACAGCTTAGCTTGCA...CGTGCTTCTAGTTTGTTTCTTTAATTTAACAAGTGCTGCAGTTTGCCCACCCGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| CDS-3UTR CAA 90 bp | CTTCCTGGGGAAGTTCTTTCTCCGTGTCCAAGTGAAGTAGTTCAGCTGCTCACACTGTTCTCCAACCTCTaGTTTCAGTTTCTTCAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LPGEVLSPCPSEVVQLLTLFSNL*FQFLQW Trigger: CCACTGAAGAAACTGAAACAAGAGGTTGGAGAACAG...TGTGAGCAGCTGAACTACTTCACTTGGACACGGAGAAAGAACTTCCCCAGGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| CDS CCA 72 bp | GCAGGCACACAGGGGCTGAGGCGGCCCACACGATCATaGGAGACGAGGCGGGCGAGCCGCAGCCCCTCATCC | + |
|
Preference number: 6 (lower is better) Translates to: AGTQGLRRPTRS*ETRRASRSPSS Trigger: GGATGAGGGGCTGCGGCTCGCCCGCCTCGTCTCCCATGATCGTGTGGGCCGCCTCAGCCCCTGTGTGCCTGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026469.9 |
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| CDS TCA 72 bp | ACTCTGCGAGAGGCGGCTTCGCAGGCACACAGGGGCTaGGGCGGCCCACACGATCATGGGAGACGAGGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: TLREAASQAHRG*GGPHDHGRRGG Trigger: CCCGCCTCGTCTCCCATGATCGTGTGGGCCGCCTCAGCCCCTGTGTGCCTGCGAAGCCGCCTCTCGCAGAGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026469.9 |
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| CDS TCA 72 bp | TTAACGCTGCTCCTGCGGCCCTCCACCAGAGCAGGATaGGGTCCCGGGGCAGGGCAGCGGTCCAGCAACCCC | + |
|
Preference number: 6 (lower is better) Translates to: LTLLLRPSTRAG*GPGAGQRSSNP Trigger: GGGGTTGCTGGACCGCTGCCCTGCCCCGGGACCTCATCCTGCTCTGGTGGAGGGCCGCAGGAGCAGCGTTAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| CDS GCA 72 bp | CGGGCGAGCCGCAGCCCCTCATCCATCAGTGTCTGCTaGAAGATGTGGCGGCTCCATAGCCCATGCGCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: RASRSPSSISVC*KMWRLHSPCAG Trigger: GCCAGCGCATGGGCTATGGAGCCGCCACATCTTGCAGCAGACACTGATGGATGAGGGGCTGCGGCTCGCCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026469.9 |
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| CDS GCA 72 bp | AGGCGGGCGAGCCGCAGCCCCTCATCCATCAGTGTCTaGTGCAAGATGTGGCGGCTCCATAGCCCATGCGCT | + |
|
Preference number: 6 (lower is better) Translates to: RRASRSPSSISV*CKMWRLHSPCA Trigger: AGCGCATGGGCTATGGAGCCGCCACATCTTGCAGCAGACACTGATGGATGAGGGGCTGCGGCTCGCCCGCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026469.9 |
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| CDS CCA 72 bp | TCTCCCCAGACAGACTGGCGCTGTCCTCCTCTAGGCTaGGGCGGTATGGGGGTGCATAGGACTCAGGGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: SPQTDWRCPPLG*GGMGVHRTQGL Trigger: CAGGCCCTGAGTCCTATGCACCCCCATACCGCCCCAGCCTAGAGGAGGACAGCGCCAGTCTGTCTGGGGAGA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| CDS TCA 72 bp | GTGTCCGAGGCAGTGCCATGGCTGGGGCACTTGCCTTaGATCTGGGTTGCGGGGTCCGGCGTGTGTTATCCC | + |
|
Preference number: 6 (lower is better) Translates to: VSEAVPWLGHLP*IWVAGSGVCYP Trigger: GGGATAACACACGCCGGACCCCGCAACCCAGATTCAAGGCAAGTGCCCCAGCCATGGCACTGCCTCGGACAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| CDS GCA 72 bp | ACCCAGTGTCCGAGGCAGTGCCATGGCTGGGGCACTTaGCTTGAATCTGGGTTGCGGGGTCCGGCGTGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: TQCPRQCHGWGT*LESGLRGPACV Trigger: AACACACGCCGGACCCCGCAACCCAGATTCAAGGCAAGTGCCCCAGCCATGGCACTGCCTCGGACACTGGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| CDS CCA 72 bp | TTGCGGGGTCCGGCGTGTGTTATCCCCTCTGCCAGGTaGCTGTTCCGCTGTGGGAGAGGGAGCTCTGTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: LRGPACVIPSAR*LFRCGRGSSVH Trigger: ATGCACAGAGCTCCCTCTCCCACAGCGGAACAGCCACCTGGCAGAGGGGATAACACACGCCGGACCCCGCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| CDS CCA 72 bp | GGCCTCCTCTTCTCCCCCTGCTCCAACATCAGATTCTaGAGTGCTCTGGCCTGGCCAGATCCGGGGATCCCC | + |
|
Preference number: 6 (lower is better) Translates to: GLLFSPCSNIRF*SALAWPDPGIP Trigger: GGGGATCCCCGGATCTGGCCAGGCCAGAGCACTCCAGAATCTGATGTTGGAGCAGGGGGAGAAGAGGAGGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| CDS CAA 72 bp | AGTGTCCGAGGCAGTGCCATGGCTGGGGCACTTGCCTaGAATCTGGGTTGCGGGGTCCGGCGTGTGTTATCC | + |
|
Preference number: 6 (lower is better) Translates to: SVRGSAMAGALA*NLGCGVRRVLS Trigger: GGATAACACACGCCGGACCCCGCAACCCAGATTCAAGGCAAGTGCCCCAGCCATGGCACTGCCTCGGACACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| CDS CAA 72 bp | GCACTGCCCGCCTTTTCTCCTGGGCTGCCGTGCCCATaGCTCATGCTCCCTTTCCGGGTACCAGCTGTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: ALPAFSPGLPCP*LMLPFRVPAVS Trigger: TGAGACAGCTGGTACCCGGAAAGGGAGCATGAGCAATGGGCACGGCAGCCCAGGAGAAAAGGCGGGCAGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| CDS TCA 72 bp | TGCCCTCCCGCCTTTTGGAGTCCAGGCGGCCGTAGATaGCGCTGTACTTCCGGATCTCCTCTTCCTTCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: CPPAFWSPGGRR*RCTSGSPLPSG Trigger: CCCAGAAGGAAGAGGAGATCCGGAAGTACAGCGTCATCTACGGCCGCCTGGACTCCAAAAGGCGGGAGGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| CDS GCA 72 bp | CCGCCTTTTCTCCTGGGCTGCCGTGCCCATTGCTCATaGTCCCTTTCCGGGTACCAGCTGTCTCAGAGATCT | + |
|
Preference number: 6 (lower is better) Translates to: PPFLLGCRAHCS*SLSGYQLSQRS Trigger: AGATCTCTGAGACAGCTGGTACCCGGAAAGGGAGCATGAGCAATGGGCACGGCAGCCCAGGAGAAAAGGCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| CDS CCA 72 bp | GAAAAGTGGGATGCTGGAGACGGGCACAGCAGGCACTaGTTGGCTGAAGAGCCCTGGATTGGTGGCCCATTC | + |
|
Preference number: 6 (lower is better) Translates to: EKWDAGDGHSRH*LAEEPWIGGPF Trigger: GAATGGGCCACCAATCCAGGGCTCTTCAGCCAACCAGTGCCTGCTGTGCCCGTCTCCAGCATCCCACTTTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| CDS GCA 72 bp | GCTCCGCGCCAGCTTCTTATTCAGCTTCAACAGGGATaGGATCTCTCCAGTGTCACCCCTGGGGAAACTCCG | + |
|
Preference number: 6 (lower is better) Translates to: APRQLLIQLQQG*DLSSVTPGETP Trigger: CGGAGTTTCCCCAGGGGTGACACTGGAGAGATCGCATCCCTGTTGAAGCTGAATAAGAAGCTGGCGCGGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| CDS GCA 72 bp | CAGAACTGGGCAGCAGCCTCGTTGATGGTCAGCTCATaGAAGCTAAGCTGTTTGCCCTCCCGCCTTTTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: QNWAAASLMVSS*KLSCLPSRLLE Trigger: CTCCAAAAGGCGGGAGGGCAAACAGCTTAGCTTGCATGAGCTGACCATCAACGAGGCTGCTGCCCAGTTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| CDS CAA 90 bp | TGTCGGGACAGTGAGAAGAGTTCTACCCTTCGCAGTAAAAGAGTGTaGTCCCTCATGCAGAACTGGGCAGCAGCCTCGTTGATGGTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: CRDSEKSSTLRSKRV*SLMQNWAAASLMVS Trigger: GCTGACCATCAACGAGGCTGCTGCCCAGTTCTGCATGAGGGACAACACTCTTTTACTGCGAAGGGTAGAACTCTTCTCACTGTCCCGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| CDS GCA 72 bp | AGTGAAGCCTGGATCCCTTCAAGGAAGAAAGATAGGTaGTCTCTCGGGCTACTTGTCGGGACAGTGAGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: SEAWIPSRKKDR*SLGLLVGTVRR Trigger: TCTTCTCACTGTCCCGACAAGTAGCCCGAGAGAGCACCTATCTTTCTTCCTTGAAGGGATCCAGGCTTCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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| CDS CAA 72 bp | AGTGAGAAGAGTTCTACCCTTCGCAGTAAAAGAGTGTaGTCCCTCATGCAGAACTGGGCAGCAGCCTCGTTG | + |
|
Preference number: 6 (lower is better) Translates to: SEKSSTLRSKRV*SLMQNWAAASL Trigger: CAACGAGGCTGCTGCCCAGTTCTGCATGAGGGACAACACTCTTTTACTGCGAAGGGTAGAACTCTTCTCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026469.9 ENSMUST00000099157.4 |
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