Pregenerated sensors for NAALADL2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000102758Ensembl transcript IDs: ENSMUST00000203414.2
Found 159 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTCTGCCTTCTCGAAGGGAGGACAGTGTACACTGGACAAGAATATTaGGAGCCTGAAAATCCAGGTGACTTTAGTCACTCTCTGAACACA | + |
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Preference number: 1 (lower is better) Translates to: FCLLEGRTVYTGQEY*EPENPGDFSHSLNT Trigger: TGTGTTCAGAGAGTGACTAAAGTCACCTGGATTTTCAGGCTCTCAATATTCTTGTCCAGTGTACACTGTCCTCCCTTCGAGAAGGCAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
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| 3UTR GCA 90 bp | CAACACTGTTGCTGTTTCCAGGTAACAGTTACCCCTGTTATATTTTaGTCAGCATCTTTCTTTCTGACTTCTGGCATCATATACAGTCAT | + |
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Preference number: 1 (lower is better) Translates to: QHCCCFQVTVTPVIF*SASFFLTSGIIYSH Trigger: ATGACTGTATATGATGCCAGAAGTCAGAAAGAAAGATGCTGAGCAAAATATAACAGGGGTAACTGTTACCTGGAAACAGCAACAGTGTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
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| 3UTR CCA 90 bp | TCAGTTCATTGCTTTGAGAAAGCAACCACTAATAATGGTGGGAGATaGTCCTTGCCAATCACTTACCCAATGATGGTTAATTCTTTTCTC | + |
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Preference number: 1 (lower is better) Translates to: SVHCFEKATTNNGGR*SLPITYPMMVNSFL Trigger: GAGAAAAGAATTAACCATCATTGGGTAAGTGATTGGCAAGGACCATCTCCCACCATTATTAGTGGTTGCTTTCTCAAAGCAATGAACTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
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| 3UTR GCA 90 bp | CCACTTGTCACTACCTTGTTCAGGATTGTATCTACTAAGGAGTTCTaGAAAAAGTTAACATGTTACGCATCTGAAAATGTCTTGAGACAA | + |
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Preference number: 1 (lower is better) Translates to: PLVTTLFRIVSTKEF*KKLTCYASENVLRQ Trigger: TTGTCTCAAGACATTTTCAGATGCGTAACATGTTAACTTTTTGCAGAACTCCTTAGTAGATACAATCCTGAACAAGGTAGTGACAAGTGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
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| 3UTR CCA 90 bp | TGGATTTTCAAAGACAAGCTTTGCCATTTTTCCATCATAGTTATATaGTGTTCTGTTAAAGTGACATTAGAGCAAGAGGTTGTGAGGAAG | + |
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Preference number: 1 (lower is better) Translates to: WIFKDKLCHFSIIVI*CSVKVTLEQEVVRK Trigger: CTTCCTCACAACCTCTTGCTCTAATGTCACTTTAACAGAACACCATATAACTATGATGGAAAAATGGCAAAGCTTGTCTTTGAAAATCCA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
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| 3UTR CCA 90 bp | ATTCGAAGTGGTCTTGGGCATCAATCACTCATTCAGAATGCATCATaGCTTAACATTGAACAGATACTTGCAAAATTATCTAAAACCTTA | + |
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Preference number: 1 (lower is better) Translates to: IRSGLGHQSLIQNAS*LNIEQILAKLSKTL Trigger: TAAGGTTTTAGATAATTTTGCAAGTATCTGTTCAATGTTAAGCCATGATGCATTCTGAATGAGTGATTGATGCCCAAGACCACTTCGAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
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| 3UTR-3UTR CCA 90 bp | TTTCACAACTTGAAGCCTAGTTGTCCTGATAGTATATCTGTGCTTAGTTTTCACGAGAAGAGGCAGTGCTaGGTAGGCAGGGCCAAACCT | + |
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Preference number: 2 (lower is better) Translates to: FHNLKPSCPDSISVLSFHEKRQC*VGRAKP Trigger: AGGTTTGGCCCTGCCTACCCAGCACTGCCTCTTCTC...GTGAAAACTAAGCACAGATATACTATCAGGACAACTAGGCTTCAAGTTGTGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
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| 3UTR-3UTR TCA 90 bp | GGTTTTATGATTAAAAGCCAGATCATTGACCTAGATCTTGGCCGACAGACTCCCAAACACTCTTTGACATaGGTTTTGACTCTCTTGCAG | + |
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Preference number: 2 (lower is better) Translates to: GFMIKSQIIDLDLGRQTPKHSLT*VLTLLQ Trigger: CTGCAAGAGAGTCAAAACTCATGTCAAAGAGTGTTT...GGGAGTCTGTCGGCCAAGATCTAGGTCAATGATCTGGCTTTTAATCATAAAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGCATCATATACAGTCATTCCTCAGACTTTGTGCTATTTGCCCGGATATTCTACTGGACAAGAATATTaGGAGCCTGAAAATCCAGGT | + |
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Preference number: 2 (lower is better) Translates to: LASYTVIPQTLCYLPGYSTGQEY*EPENPG Trigger: ACCTGGATTTTCAGGCTCTCAATATTCTTGTCCAGT...AGAATATCCGGGCAAATAGCACAAAGTCTGAGGAATGACTGTATATGATGCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
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| 3UTR-3UTR GCA 90 bp | GGTTTTATGATTAAAAGCCAGATCATTGACCTAGATCTTGGCCGACAGACTCCCATTGCCTCAGTTCATTaGTTTGAGAAAGCAACCACT | + |
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Preference number: 2 (lower is better) Translates to: GFMIKSQIIDLDLGRQTPIASVH*FEKATT Trigger: AGTGGTTGCTTTCTCAAAGCAATGAACTGAGGCAAT...GGGAGTCTGTCGGCCAAGATCTAGGTCAATGATCTGGCTTTTAATCATAAAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
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| 3UTR-3UTR GCA 90 bp | CTGGCATCATATACAGTCATTCCTCAGACTTTGTGCTATTTGCCCGGATATTCTGGGTTATCTATGACTTaGTGTCTCCTGGGCATATTT | + |
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Preference number: 2 (lower is better) Translates to: LASYTVIPQTLCYLPGYSGLSMT*CLLGIF Trigger: AAATATGCCCAGGAGACAGCAAGTCATAGATAACCC...AGAATATCCGGGCAAATAGCACAAAGTCTGAGGAATGACTGTATATGATGCCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
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| 3UTR-3UTR CCA 90 bp | GGTTTTATGATTAAAAGCCAGATCATTGACCTAGATCTTGGCCGACAGACTCCCAGGGAACTATTCTCATaGTCTCTTTCCAAAGGGAAA | + |
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Preference number: 2 (lower is better) Translates to: GFMIKSQIIDLDLGRQTPRELFS*SLSKGK Trigger: TTTCCCTTTGGAAAGAGACCATGAGAATAGTTCCCT...GGGAGTCTGTCGGCCAAGATCTAGGTCAATGATCTGGCTTTTAATCATAAAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
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| 3UTR-3UTR TCA 90 bp | TCTTTCTTTCTGACTTCTGGCATCATATACAGTCATTCCTCAGACTTTGTGCTAACTTTAGTCACTCTCTaGACACATGCCTATGTCCAC | + |
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Preference number: 2 (lower is better) Translates to: SFFLTSGIIYSHSSDFVLTLVTL*THAYVH Trigger: GTGGACATAGGCATGTGTTCAGAGAGTGACTAAAGT...TAGCACAAAGTCTGAGGAATGACTGTATATGATGCCAGAAGTCAGAAAGAAAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
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| 3UTR-3UTR CCA 90 bp | TTTCACAACTTGAAGCCTAGTTGTCCTGATAGTATATCTGTGCTTAGTTTTCACAGGGACAGCCATGTGTaGTACTCCTTTAGCACAGTT | + |
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Preference number: 2 (lower is better) Translates to: FHNLKPSCPDSISVLSFHRDSHV*YSFSTV Trigger: AACTGTGCTAAAGGAGTACCACACATGGCTGTCCCT...GTGAAAACTAAGCACAGATATACTATCAGGACAACTAGGCTTCAAGTTGTGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
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| 3UTR CAA 90 bp | CATTGCTTTGAGAAAGCAACCACTAATAATGGTGGGAGATGGTCCTaGCCAATCACTTACCCAATGATGGTTAATTCTTTTCTCTCAACT | + |
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Preference number: 2 (lower is better) Translates to: HCFEKATTNNGGRWS*PITYPMMVNSFLST Trigger: AGTTGAGAGAAAAGAATTAACCATCATTGGGTAAGTGATTGGCAAGGACCATCTCCCACCATTATTAGTGGTTGCTTTCTCAAAGCAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
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| 3UTR CAA 90 bp | TGTGAATGTGTGTATGTGATATATTTGAAGACTAGGCATGGGGAATaGAATCCCTTAGTGAAAGCATTTATGTACTCCCAGACAGGTGCT | + |
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Preference number: 2 (lower is better) Translates to: CECVYVIYLKTRHGE*NPLVKAFMYSQTGA Trigger: AGCACCTGTCTGGGAGTACATAAATGCTTTCACTAAGGGATTCAATTCCCCATGCCTAGTCTTCAAATATATCACATACACACATTCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
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| 3UTR CAA 90 bp | CAAACAGAAACACTGTTCTTTACAGCACCTGGTATAAAGAAGGCCTaGGTGATATTACAGGATCCCTCTGAGAAGAAAGAAACAACACAA | + |
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Preference number: 2 (lower is better) Translates to: QTETLFFTAPGIKKA*VILQDPSEKKETTQ Trigger: TTGTGTTGTTTCTTTCTTCTCAGAGGGATCCTGTAATATCACCAAGGCCTTCTTTATACCAGGTGCTGTAAAGAACAGTGTTTCTGTTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
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| 3UTR-3UTR TCA 90 bp | TGTCCACATTTCCCCATTCATCTTGCTCCAGTACTGCATCTGATTTGTATAGTGACCCATTTGTTCTTCTaGTATCTGAAGATAATGGAG | + |
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Preference number: 2 (lower is better) Translates to: CPHFPIHLAPVLHLICIVTHLFF*YLKIME Trigger: CTCCATTATCTTCAGATATCAGAAGAACAAATGGGT...CACTATACAAATCAGATGCAGTACTGGAGCAAGATGAATGGGGAAATGTGGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGCATCATATACAGTCATTCCTCAGACTTTGTGCTATTTGCCCGGATATTCTATGAACTACTTTGAGTaGTACTTGATGCCTAGATGT | + |
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Preference number: 2 (lower is better) Translates to: LASYTVIPQTLCYLPGYSMNYFE*YLMPRC Trigger: ACATCTAGGCATCAAGTACCACTCAAAGTAGTTCAT...AGAATATCCGGGCAAATAGCACAAAGTCTGAGGAATGACTGTATATGATGCCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
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| 3UTR-3UTR CCA 90 bp | TTTCACAACTTGAAGCCTAGTTGTCCTGATAGTATATCTGTGCTTAGTTTTCACGGAGAGGGGGTTAAATaGGTTATCTATGACTTGCTG | + |
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Preference number: 2 (lower is better) Translates to: FHNLKPSCPDSISVLSFHGEGVK*VIYDLL Trigger: CAGCAAGTCATAGATAACCCATTTAACCCCCTCTCC...GTGAAAACTAAGCACAGATATACTATCAGGACAACTAGGCTTCAAGTTGTGAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
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| 3UTR CAA 90 bp | GCTGTCTCCTGGGCATATTTCTACATGAACTACTTTGAGTGGTACTaGATGCCTAGATGTCTTTGTATCAGTTTGAATGTACTACCAATT | + |
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Preference number: 2 (lower is better) Translates to: AVSWAYFYMNYFEWY*MPRCLCISLNVLPI Trigger: AATTGGTAGTACATTCAAACTGATACAAAGACATCTAGGCATCAAGTACCACTCAAAGTAGTTCATGTAGAAATATGCCCAGGAGACAGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
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| 3UTR-3UTR TCA 90 bp | ATGTCCACATTTCCCCATTCATCTTGCTCCAGTACTGCATCTGATTTGTATAGTCATCTGAAAATGTCTTaGGACAAACATGTCAGAGTT | + |
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Preference number: 2 (lower is better) Translates to: MSTFPHSSCSSTASDLYSHLKMS*DKHVRV Trigger: AACTCTGACATGTTTGTCTCAAGACATTTTCAGATG...ACTATACAAATCAGATGCAGTACTGGAGCAAGATGAATGGGGAAATGTGGACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
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| 3UTR-3UTR CCA 90 bp | TTTCACAACTTGAAGCCTAGTTGTCCTGATAGTATATCTGTGCTTAGTTTTCACGTTCTTTACAGCACCTaGTATAAAGAAGGCCTTGGT | + |
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Preference number: 2 (lower is better) Translates to: FHNLKPSCPDSISVLSFHVLYST*YKEGLG Trigger: ACCAAGGCCTTCTTTATACCAGGTGCTGTAAAGAAC...GTGAAAACTAAGCACAGATATACTATCAGGACAACTAGGCTTCAAGTTGTGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
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| 3UTR-3UTR TCA 90 bp | TTTCACAACTTGAAGCCTAGTTGTCCTGATAGTATATCTGTGCTTAGTTTTCACCAGCATCTTTCTTTCTaGCTTCTGGCATCATATACA | + |
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Preference number: 2 (lower is better) Translates to: FHNLKPSCPDSISVLSFHQHLSF*LLASYT Trigger: TGTATATGATGCCAGAAGTCAGAAAGAAAGATGCTG...GTGAAAACTAAGCACAGATATACTATCAGGACAACTAGGCTTCAAGTTGTGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
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| 3UTR-3UTR GCA 90 bp | ATGTCCACATTTCCCCATTCATCTTGCTCCAGTACTGCATCTGATTTGTATAGTTTTCCAAAGGGAAACTaGATTACCCAATACAAGAAA | + |
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Preference number: 2 (lower is better) Translates to: MSTFPHSSCSSTASDLYSFPKGN*ITQYKK Trigger: TTTCTTGTATTGGGTAATGCAGTTTCCCTTTGGAAA...ACTATACAAATCAGATGCAGTACTGGAGCAAGATGAATGGGGAAATGTGGACAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
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| 3UTR-3UTR CCA 90 bp | AACTACTTTGAGTGGTACTTGATGCCTAGATGTCTTTGTATCAGTTTGAATGTACATCAGAGAGAATACTaGCATTCCTCCACATTCTGT | + |
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Preference number: 2 (lower is better) Translates to: NYFEWYLMPRCLCISLNVHQREY*HSSTFC Trigger: ACAGAATGTGGAGGAATGCCAGTATTCTCTCTGATG...TACATTCAAACTGATACAAAGACATCTAGGCATCAAGTACCACTCAAAGTAGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
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| 3UTR-3UTR CCA 90 bp | TCTTTCTTTCTGACTTCTGGCATCATATACAGTCATTCCTCAGACTTTGTGCTATTTGCCCGGATATTCTaGGAACATTTTTGTCAAGTA | + |
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Preference number: 2 (lower is better) Translates to: SFFLTSGIIYSHSSDFVLFARIF*EHFCQV Trigger: TACTTGACAAAAATGTTCCCAGAATATCCGGGCAAA...TAGCACAAAGTCTGAGGAATGACTGTATATGATGCCAGAAGTCAGAAAGAAAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
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| 3UTR CAA 90 bp | AAGGAGTTCTGCAAAAAGTTAACATGTTACGCATCTGAAAATGTCTaGAGACAAACATGTCAGAGTTGCGATACATGTTGTAAGAGATCA | + |
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Preference number: 2 (lower is better) Translates to: KEFCKKLTCYASENV*RQTCQSCDTCCKRS Trigger: TGATCTCTTACAACATGTATCGCAACTCTGACATGTTTGTCTCAAGACATTTTCAGATGCGTAACATGTTAACTTTTTGCAGAACTCCTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
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| 3UTR-3UTR CAA 90 bp | TGTCCACATTTCCCCATTCATCTTGCTCCAGTACTGCATCTGATTTGTATAGTGGGTGGGAGATGGTCCTaGCCAATCACTTACCCAATG | + |
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Preference number: 3 (lower is better) Translates to: CPHFPIHLAPVLHLICIVGGRWS*PITYPM Trigger: CATTGGGTAAGTGATTGGCAAGGACCATCTCCCACC...CACTATACAAATCAGATGCAGTACTGGAGCAAGATGAATGGGGAAATGTGGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
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| 3UTR-3UTR CAA 90 bp | ATGTCCACATTTCCCCATTCATCTTGCTCCAGTACTGCATCTGATTTGTATAGTCCGACAGACTCCCTTTaGTCTCTCAGGTCAGGAGTA | + |
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Preference number: 3 (lower is better) Translates to: MSTFPHSSCSSTASDLYSPTDSL*SLRSGV Trigger: TACTCCTGACCTGAGAGACAAAAGGGAGTCTGTCGG...ACTATACAAATCAGATGCAGTACTGGAGCAAGATGAATGGGGAAATGTGGACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
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| 3UTR TCA 72 bp | GAGAGCCTGAAAATCCAGGTGACTTTAGTCACTCTCTaGACACATGCCTATGTCCACATTTCCCCATTCATC | + |
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Preference number: 3 (lower is better) Translates to: ESLKIQVTLVTL*THAYVHISPFI Trigger: GATGAATGGGGAAATGTGGACATAGGCATGTGTTCAGAGAGTGACTAAAGTCACCTGGATTTTCAGGCTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
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| 3UTR TCA 72 bp | CTCGAAGGGAGGACAGTGTACACTGGACAAGAATATTaGGAGCCTGAAAATCCAGGTGACTTTAGTCACTCT | + |
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Preference number: 3 (lower is better) Translates to: LEGRTVYTGQEY*EPENPGDFSHS Trigger: AGAGTGACTAAAGTCACCTGGATTTTCAGGCTCTCAATATTCTTGTCCAGTGTACACTGTCCTCCCTTCGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
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| 3UTR CCA 72 bp | GGTTGTGAGGAAGATGTAGGAAGGGACAGCCATGTGTaGTACTCCTTTAGCACAGTTCCTGTTTCTGTAATT | + |
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Preference number: 3 (lower is better) Translates to: GCEEDVGRDSHV*YSFSTVPVSVI Trigger: AATTACAGAAACAGGAACTGTGCTAAAGGAGTACCACACATGGCTGTCCCTTCCTACATCTTCCTCACAACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
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| 3UTR TCA 72 bp | TCCCAGACAGGTGCTGGAACTGAATGCAAGTCTTCATaGTTAAGTTGTCAGTGTTCCTATCTGCTGAACCAT | + |
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Preference number: 3 (lower is better) Translates to: SQTGAGTECKSS*LSCQCSYLLNH Trigger: ATGGTTCAGCAGATAGGAACACTGACAACTTAATCATGAAGACTTGCATTCAGTTCCAGCACCTGTCTGGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
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| 3UTR GCA 72 bp | GAACACATGCCTATGTCCACATTTCCCCATTCATCTTaGTCCAGTACTGCATCTGATTTGTATAGTGGTGGT | + |
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Preference number: 3 (lower is better) Translates to: EHMPMSTFPHSS*SSTASDLYSGG Trigger: ACCACCACTATACAAATCAGATGCAGTACTGGAGCAAGATGAATGGGGAAATGTGGACATAGGCATGTGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
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| 3UTR GCA 72 bp | ACATGTGGAATATGTTCACCACTAGCCCCTTTTGTTTaGAGTGTACACACTCAATCACCTAATAGAGTTGGG | + |
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Preference number: 3 (lower is better) Translates to: TCGICSPLAPFV*SVHTQSPNRVG Trigger: CCCAACTCTATTAGGTGATTGAGTGTGTACACTGCAAACAAAAGGGGCTAGTGGTGAACATATTCCACATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
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| 3UTR CCA 72 bp | GTGCTCTCAAACAGAAACACTGTTCTTTACAGCACCTaGTATAAAGAAGGCCTTGGTGATATTACAGGATCC | + |
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Preference number: 3 (lower is better) Translates to: VLSNRNTVLYST*YKEGLGDITGS Trigger: GGATCCTGTAATATCACCAAGGCCTTCTTTATACCAGGTGCTGTAAAGAACAGTGTTTCTGTTTGAGAGCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
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| 3UTR CCA 72 bp | TTATGTATGCTGCTTTTTAGGTGTTTTGCAGATGAATaGCTCCTAGTAAAGGCTGCTGGTGATCTAGCTGTG | + |
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Preference number: 3 (lower is better) Translates to: LCMLLFRCFADE*LLVKAAGDLAV Trigger: CACAGCTAGATCACCAGCAGCCTTTACTAGGAGCCATTCATCTGCAAAACACCTAAAAAGCAGCATACATAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
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| 3UTR GCA 72 bp | CTTCTGGCATCATATACAGTCATTCCTCAGACTTTGTaGTATTTGCCCGGATATTCTGGGAACATTTTTGTC | + |
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Preference number: 3 (lower is better) Translates to: LLASYTVIPQTL*YLPGYSGNIFV Trigger: GACAAAAATGTTCCCAGAATATCCGGGCAAATAGCACAAAGTCTGAGGAATGACTGTATATGATGCCAGAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
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| 3UTR CCA 72 bp | TGCTTTGAGAAAGCAACCACTAATAATGGTGGGAGATaGTCCTTGCCAATCACTTACCCAATGATGGTTAAT | + |
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Preference number: 3 (lower is better) Translates to: CFEKATTNNGGR*SLPITYPMMVN Trigger: ATTAACCATCATTGGGTAAGTGATTGGCAAGGACCATCTCCCACCATTATTAGTGGTTGCTTTCTCAAAGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
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| 3UTR-3UTR CAA 90 bp | CTGGCATCATATACAGTCATTCCTCAGACTTTGTGCTATTTGCCCGGATATTCTGAAATATTCCCTTCCTaGTCAATGTACATCACTGCT | + |
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Preference number: 3 (lower is better) Translates to: LASYTVIPQTLCYLPGYSEIFPS*SMYITA Trigger: AGCAGTGATGTACATTGACAAGGAAGGGAATATTTC...AGAATATCCGGGCAAATAGCACAAAGTCTGAGGAATGACTGTATATGATGCCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
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| 3UTR-3UTR CAA 90 bp | CTGGCATCATATACAGTCATTCCTCAGACTTTGTGCTATTTGCCCGGATATTCTTACTTTGAGTGGTACTaGATGCCTAGATGTCTTTGT | + |
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Preference number: 3 (lower is better) Translates to: LASYTVIPQTLCYLPGYSYFEWY*MPRCLC Trigger: ACAAAGACATCTAGGCATCAAGTACCACTCAAAGTA...AGAATATCCGGGCAAATAGCACAAAGTCTGAGGAATGACTGTATATGATGCCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
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| 3UTR-3UTR CAA 90 bp | ATGTCCACATTTCCCCATTCATCTTGCTCCAGTACTGCATCTGATTTGTATAGTGCATCTGAAAATGTCTaGAGACAAACATGTCAGAGT | + |
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Preference number: 3 (lower is better) Translates to: MSTFPHSSCSSTASDLYSASENV*RQTCQS Trigger: ACTCTGACATGTTTGTCTCAAGACATTTTCAGATGC...ACTATACAAATCAGATGCAGTACTGGAGCAAGATGAATGGGGAAATGTGGACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
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| 3UTR-3UTR CAA 90 bp | TTTCACAACTTGAAGCCTAGTTGTCCTGATAGTATATCTGTGCTTAGTTTTCACACTAGGCATGGGGAATaGAATCCCTTAGTGAAAGCA | + |
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Preference number: 3 (lower is better) Translates to: FHNLKPSCPDSISVLSFHTRHGE*NPLVKA Trigger: TGCTTTCACTAAGGGATTCAATTCCCCATGCCTAGT...GTGAAAACTAAGCACAGATATACTATCAGGACAACTAGGCTTCAAGTTGTGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
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| 3UTR TCA 72 bp | AGGTGGGTCTTAAAAACCACTTCTTCAGAAAGGGAATaGCTAGTACCATTTCTAAAGGGTACCCAGAAAGAA | + |
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Preference number: 3 (lower is better) Translates to: RWVLKTTSSERE*LVPFLKGTQKE Trigger: TTCTTTCTGGGTACCCTTTAGAAATGGTACTAGTCATTCCCTTTCTGAAGAAGTGGTTTTTAAGACCCACCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
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| 3UTR CCA 72 bp | GTCTCCTGGGCATATTTCTACATGAACTACTTTGAGTaGTACTTGATGCCTAGATGTCTTTGTATCAGTTTG | + |
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Preference number: 3 (lower is better) Translates to: VSWAYFYMNYFE*YLMPRCLCISL Trigger: CAAACTGATACAAAGACATCTAGGCATCAAGTACCACTCAAAGTAGTTCATGTAGAAATATGCCCAGGAGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
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| 3UTR CCA 72 bp | TTCCTATCTGCTGAACCATCTTTCCAGTCCCTCATTTaGGGTTTTAATGATTTCACTGTGAAAAATCTTTGG | + |
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Preference number: 3 (lower is better) Translates to: FLSAEPSFQSLI*GFNDFTVKNLW Trigger: CCAAAGATTTTTCACAGTGAAATCATTAAAACCCCAAATGAGGGACTGGAAAGATGGTTCAGCAGATAGGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
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| 3UTR CCA 72 bp | GGTCTTGGGCATCAATCACTCATTCAGAATGCATCATaGCTTAACATTGAACAGATACTTGCAAAATTATCT | + |
|
Preference number: 3 (lower is better) Translates to: GLGHQSLIQNAS*LNIEQILAKLS Trigger: AGATAATTTTGCAAGTATCTGTTCAATGTTAAGCCATGATGCATTCTGAATGAGTGATTGATGCCCAAGACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTCACAACTTGAAGCCTAGTTGTCCTGATAGTATATCTGTGCTTAGTTTTCACATTCAACATAGGATCTaGTCTGGCATTAAAATCCTG | + |
|
Preference number: 3 (lower is better) Translates to: FHNLKPSCPDSISVLSFHIQHRI*SGIKIL Trigger: CAGGATTTTAATGCCAGACAAGATCCTATGTTGAAT...GTGAAAACTAAGCACAGATATACTATCAGGACAACTAGGCTTCAAGTTGTGAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTCACAACTTGAAGCCTAGTTGTCCTGATAGTATATCTGTGCTTAGTTTTCACCACTGTGAAAAATCTTaGGGGTTCCTCATTAATTTG | + |
|
Preference number: 3 (lower is better) Translates to: FHNLKPSCPDSISVLSFHHCEKS*GFLINL Trigger: CAAATTAATGAGGAACCCCAAAGATTTTTCACAGTG...GTGAAAACTAAGCACAGATATACTATCAGGACAACTAGGCTTCAAGTTGTGAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTCACAACTTGAAGCCTAGTTGTCCTGATAGTATATCTGTGCTTAGTTTTCACAATCTGGGTTCTTCCTaGTTAAATCGGTTGCTATAT | + |
|
Preference number: 3 (lower is better) Translates to: FHNLKPSCPDSISVLSFHNLGSS*LNRLLY Trigger: ATATAGCAACCGATTTAACAAGGAAGAACCCAGATT...GTGAAAACTAAGCACAGATATACTATCAGGACAACTAGGCTTCAAGTTGTGAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| 3UTR GCA 72 bp | ACTACCTTGTTCAGGATTGTATCTACTAAGGAGTTCTaGAAAAAGTTAACATGTTACGCATCTGAAAATGTC | + |
|
Preference number: 3 (lower is better) Translates to: TTLFRIVSTKEF*KKLTCYASENV Trigger: GACATTTTCAGATGCGTAACATGTTAACTTTTTGCAGAACTCCTTAGTAGATACAATCCTGAACAAGGTAGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| 3UTR CCA 72 bp | TTTTTCAGGATTGAAATAGTTAGGGAACTATTCTCATaGTCTCTTTCCAAAGGGAAACTGCATTACCCAATA | + |
|
Preference number: 3 (lower is better) Translates to: FFRIEIVRELFS*SLSKGKLHYPI Trigger: TATTGGGTAATGCAGTTTCCCTTTGGAAAGAGACCATGAGAATAGTTCCCTAACTATTTCAATCCTGAAAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| 3UTR CCA 72 bp | AAAGACAAGCTTTGCCATTTTTCCATCATAGTTATATaGTGTTCTGTTAAAGTGACATTAGAGCAAGAGGTT | + |
|
Preference number: 3 (lower is better) Translates to: KDKLCHFSIIVI*CSVKVTLEQEV Trigger: AACCTCTTGCTCTAATGTCACTTTAACAGAACACCATATAACTATGATGGAAAAATGGCAAAGCTTGTCTTT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS-3UTR TCA 90 bp | TGTCCACATTTCCCCATTCATCTTGCTCCAGTACTGCATCTGATTTGTATAGTGCAGTGCTGCTCAGAGTaGTGGTGCCTGGAGAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: CPHFPIHLAPVLHLICIVQCCSE*WCLERT Trigger: GGTCCTCTCCAGGCACCATCACTCTGAGCAGCACTG...CACTATACAAATCAGATGCAGTACTGGAGCAAGATGAATGGGGAAATGTGGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS-3UTR TCA 90 bp | GGTTTTATGATTAAAAGCCAGATCATTGACCTAGATCTTGGCCGACAGACTCCCGCACTAGCAGGGAGGTaGGGTTTGTTCGGCTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GFMIKSQIIDLDLGRQTPALAGR*GLFGFF Trigger: GAAAAAGCCGAACAAACCTCACCTCCCTGCTAGTGC...GGGAGTCTGTCGGCCAAGATCTAGGTCAATGATCTGGCTTTTAATCATAAAACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS-3UTR GCA 90 bp | CTGGCATCATATACAGTCATTCCTCAGACTTTGTGCTATTTGCCCGGATATTCTCATAGGAGCCAATTTTaGCCCAGGGTGTTCCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LASYTVIPQTLCYLPGYSHRSQF*PRVFLP Trigger: GGGGAGGAACACCCTGGGGCAAAATTGGCTCCTATG...AGAATATCCGGGCAAATAGCACAAAGTCTGAGGAATGACTGTATATGATGCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS-3UTR TCA 90 bp | TGTCCACATTTCCCCATTCATCTTGCTCCAGTACTGCATCTGATTTGTATAGTGGAGTGCCCCAAGTTCTaGTGCTCAGCACTATCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: CPHFPIHLAPVLHLICIVECPKF*CSALSG Trigger: ACCAGATAGTGCTGAGCATCAGAACTTGGGGCACTC...CACTATACAAATCAGATGCAGTACTGGAGCAAGATGAATGGGGAAATGTGGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS-3UTR TCA 90 bp | TGTCCACATTTCCCCATTCATCTTGCTCCAGTACTGCATCTGATTTGTATAGTGGGGTGTTCCTCCCCATaGGCAGAAAACAATAGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: CPHFPIHLAPVLHLICIVGCSSP*AENNSA Trigger: CGCACTATTGTTTTCTGCTCATGGGGAGGAACACCC...CACTATACAAATCAGATGCAGTACTGGAGCAAGATGAATGGGGAAATGTGGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS-3UTR TCA 90 bp | TTTCACAACTTGAAGCCTAGTTGTCCTGATAGTATATCTGTGCTTAGTTTTCACTTGGCTCCCAGGCACTaGGCTCTCTGCATGCACGTG | + |
|
Preference number: 4 (lower is better) Translates to: FHNLKPSCPDSISVLSFHLAPRH*ALCMHV Trigger: CACGTGCATGCAGAGAGCTCAGTGCCTGGGAGCCAA...GTGAAAACTAAGCACAGATATACTATCAGGACAACTAGGCTTCAAGTTGTGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS-3UTR CCA 90 bp | CTGGCATCATATACAGTCATTCCTCAGACTTTGTGCTATTTGCCCGGATATTCTGAGAAGAACAGATCTTaGCTGTGGCCTCCTCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LASYTVIPQTLCYLPGYSEKNRS*LWPPLA Trigger: AGCCAGAGGAGGCCACAGCCAAGATCTGTTCTTCTC...AGAATATCCGGGCAAATAGCACAAAGTCTGAGGAATGACTGTATATGATGCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS-3UTR CCA 90 bp | CTGGCATCATATACAGTCATTCCTCAGACTTTGTGCTATTTGCCCGGATATTCTGGGAGCTCTCTCCTTTaGGTCATTAGCAGGTCGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LASYTVIPQTLCYLPGYSGSSLL*VISRSH Trigger: ATGCGACCTGCTAATGACCCAAAGGAGAGAGCTCCC...AGAATATCCGGGCAAATAGCACAAAGTCTGAGGAATGACTGTATATGATGCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS-3UTR TCA 90 bp | GGTTTTATGATTAAAAGCCAGATCATTGACCTAGATCTTGGCCGACAGACTCCCCATAACTCACATCGATaGCATCACCCTGGAGAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GFMIKSQIIDLDLGRQTPHNSHR*HHPGEF Trigger: GAACTCTCCAGGGTGATGTCATCGATGTGAGTTATG...GGGAGTCTGTCGGCCAAGATCTAGGTCAATGATCTGGCTTTTAATCATAAAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS-3UTR CCA 90 bp | GGTTTTATGATTAAAAGCCAGATCATTGACCTAGATCTTGGCCGACAGACTCCCTCGATGACATCACCCTaGAGAGTTCCTTTGGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GFMIKSQIIDLDLGRQTPSMTSP*RVPLAE Trigger: TTCTGCCAAAGGAACTCTCCAGGGTGATGTCATCGA...GGGAGTCTGTCGGCCAAGATCTAGGTCAATGATCTGGCTTTTAATCATAAAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS-3UTR CCA 90 bp | TCTTTCTTTCTGACTTCTGGCATCATATACAGTCATTCCTCAGACTTTGTGCTACTACTGGATATAGACTaGAGTTGCCCCGGATGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SFFLTSGIIYSHSSDFVLLLDID*SCPGWG Trigger: GCCCCATCCGGGGCAACTCCAGTCTATATCCAGTAG...TAGCACAAAGTCTGAGGAATGACTGTATATGATGCCAGAAGTCAGAAAGAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS-3UTR GCA 90 bp | GGTTTTATGATTAAAAGCCAGATCATTGACCTAGATCTTGGCCGACAGACTCCCTTCTCTATAACCAGTTaGTGGAGCGATGGAGACACT | + |
|
Preference number: 4 (lower is better) Translates to: GFMIKSQIIDLDLGRQTPFSITS*WSDGDT Trigger: AGTGTCTCCATCGCTCCAGCAACTGGTTATAGAGAA...GGGAGTCTGTCGGCCAAGATCTAGGTCAATGATCTGGCTTTTAATCATAAAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS-3UTR CCA 90 bp | GGTTTTATGATTAAAAGCCAGATCATTGACCTAGATCTTGGCCGACAGACTCCCGCAGTGGTTGTTCTTTaGTGCAGATCTTGTGTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: GFMIKSQIIDLDLGRQTPAVVVL*CRSCVV Trigger: CACTACACAAGATCTGCACCAAAGAACAACCACTGC...GGGAGTCTGTCGGCCAAGATCTAGGTCAATGATCTGGCTTTTAATCATAAAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS-3UTR CCA 90 bp | AACTACTTTGAGTGGTACTTGATGCCTAGATGTCTTTGTATCAGTTTGAATGTAGGCTGTGGCCTCCTCTaGCTTCTTCCCTGCAAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: NYFEWYLMPRCLCISLNVGCGLL*LLPCKV Trigger: AACCTTGCAGGGAAGAAGCCAGAGGAGGCCACAGCC...TACATTCAAACTGATACAAAGACATCTAGGCATCAAGTACCACTCAAAGTAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS-3UTR CCA 90 bp | ATGTCCACATTTCCCCATTCATCTTGCTCCAGTACTGCATCTGATTTGTATAGTAGAGGGGTCTCCTCCTaGATTCAGAGTCACCACAAA | + |
|
Preference number: 4 (lower is better) Translates to: MSTFPHSSCSSTASDLYSRGVSS*IQSHHK Trigger: TTTGTGGTGACTCTGAATCCAGGAGGAGACCCCTCT...ACTATACAAATCAGATGCAGTACTGGAGCAAGATGAATGGGGAAATGTGGACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS-3UTR CCA 90 bp | GGTTTTATGATTAAAAGCCAGATCATTGACCTAGATCTTGGCCGACAGACTCCCTTAGTAATGGCTTCATaGAGGCTGAAAGACGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: GFMIKSQIIDLDLGRQTPLVMAS*RLKDGS Trigger: GGATCCGTCTTTCAGCCTCCATGAAGCCATTACTAA...GGGAGTCTGTCGGCCAAGATCTAGGTCAATGATCTGGCTTTTAATCATAAAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS-3UTR CCA 90 bp | TTTCACAACTTGAAGCCTAGTTGTCCTGATAGTATATCTGTGCTTAGTTTTCACAACAGATCTTGGCTGTaGCCTCCTCTGGCTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FHNLKPSCPDSISVLSFHNRSWL*PPLASS Trigger: GGAAGAAGCCAGAGGAGGCCACAGCCAAGATCTGTT...GTGAAAACTAAGCACAGATATACTATCAGGACAACTAGGCTTCAAGTTGTGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS-3UTR CCA 90 bp | GGTTTTATGATTAAAAGCCAGATCATTGACCTAGATCTTGGCCGACAGACTCCCCTGTATCCAGCATGGTaGTTGCTGCCAACTATAATA | + |
|
Preference number: 4 (lower is better) Translates to: GFMIKSQIIDLDLGRQTPLYPAW*LLPTII Trigger: TATTATAGTTGGCAGCAACCACCATGCTGGATACAG...GGGAGTCTGTCGGCCAAGATCTAGGTCAATGATCTGGCTTTTAATCATAAAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS-3UTR TCA 90 bp | TTTCACAACTTGAAGCCTAGTTGTCCTGATAGTATATCTGTGCTTAGTTTTCACGGTGACGTTGCTGGTTaGATGGAATCAAGATGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FHNLKPSCPDSISVLSFHGDVAG*MESRWR Trigger: CCTCCATCTTGATTCCATTCAACCAGCAACGTCACC...GTGAAAACTAAGCACAGATATACTATCAGGACAACTAGGCTTCAAGTTGTGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS-3UTR TCA 90 bp | ATGTCCACATTTCCCCATTCATCTTGCTCCAGTACTGCATCTGATTTGTATAGTAAATCTTCCTTTGGGTaGCGTTGCTGGTTGAATGGA | + |
|
Preference number: 4 (lower is better) Translates to: MSTFPHSSCSSTASDLYSKSSFG*RCWLNG Trigger: TCCATTCAACCAGCAACGTCACCCAAAGGAAGATTT...ACTATACAAATCAGATGCAGTACTGGAGCAAGATGAATGGGGAAATGTGGACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS-3UTR TCA 90 bp | AGCAAGACAAACAGACAAACACCTGGTCAAATTAGAGCTTTTTCTGTTACAATTAGGTCGCATCTCATCTaGCTGGAAGAGCTCTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: SKTNRQTPGQIRAFSVTIRSHLI*LEELCT Trigger: AGTGCAGAGCTCTTCCAGTCAGATGAGATGCGACCT...AATTGTAACAGAAAAAGCTCTAATTTGACCAGGTGTTTGTCTGTTTGTCTTGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS-3UTR GCA 90 bp | TGTCCACATTTCCCCATTCATCTTGCTCCAGTACTGCATCTGATTTGTATAGTGGTGACTGTCTGTACCTaGAAACTGACAGTTCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: CPHFPIHLAPVLHLICIVVTVCT*KLTVLF Trigger: AAAGAGAACTGTCAGTTTGCAGGTACAGACAGTCAC...CACTATACAAATCAGATGCAGTACTGGAGCAAGATGAATGGGGAAATGTGGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS-3UTR CCA 90 bp | ATGTCCACATTTCCCCATTCATCTTGCTCCAGTACTGCATCTGATTTGTATAGTACGTTGCTGGTTGAATaGAATCAAGATGGAGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: MSTFPHSSCSSTASDLYSTLLVE*NQDGGP Trigger: TGGACCTCCATCTTGATTCCATTCAACCAGCAACGT...ACTATACAAATCAGATGCAGTACTGGAGCAAGATGAATGGGGAAATGTGGACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS-3UTR CCA 90 bp | ATGTCCACATTTCCCCATTCATCTTGCTCCAGTACTGCATCTGATTTGTATAGTTGCTATTCAGCACATTaGACAGGGCCTCTTGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: MSTFPHSSCSSTASDLYSCYSAH*TGPLEK Trigger: CTTTTCAAGAGGCCCTGTCCAATGTGCTGAATAGCA...ACTATACAAATCAGATGCAGTACTGGAGCAAGATGAATGGGGAAATGTGGACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| 3UTR CAA 72 bp | ACACTGTTCTTTACAGCACCTGGTATAAAGAAGGCCTaGGTGATATTACAGGATCCCTCTGAGAAGAAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TLFFTAPGIKKA*VILQDPSEKKE Trigger: TTCTTTCTTCTCAGAGGGATCCTGTAATATCACCAAGGCCTTCTTTATACCAGGTGCTGTAAAGAACAGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS-3UTR TCA 90 bp | ATGTCCACATTTCCCCATTCATCTTGCTCCAGTACTGCATCTGATTTGTATAGTCCCAATGCAATCCAGTaGCTCTTAATCTTCTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: MSTFPHSSCSSTASDLYSPNAIQ*LLIFFA Trigger: TGCAAAGAAGATTAAGAGTCACTGGATTGCATTGGG...ACTATACAAATCAGATGCAGTACTGGAGCAAGATGAATGGGGAAATGTGGACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS-3UTR GCA 90 bp | ATGTCCACATTTCCCCATTCATCTTGCTCCAGTACTGCATCTGATTTGTATAGTTTTCCATGTCATCCTTaGTGTCATAGAGTTGTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: MSTFPHSSCSSTASDLYSFPCHP*CHRVVA Trigger: GGCTACAACTCTATGACAGCAAGGATGACATGGAAA...ACTATACAAATCAGATGCAGTACTGGAGCAAGATGAATGGGGAAATGTGGACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS-3UTR GCA 90 bp | TTTCACAACTTGAAGCCTAGTTGTCCTGATAGTATATCTGTGCTTAGTTTTCACGCATCACCTTGTATCTaGACAGAGCTGACATTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: FHNLKPSCPDSISVLSFHASPCI*TELTLA Trigger: AGCCAATGTCAGCTCTGTGCAGATACAAGGTGATGC...GTGAAAACTAAGCACAGATATACTATCAGGACAACTAGGCTTCAAGTTGTGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS-3UTR GCA 90 bp | AACTACTTTGAGTGGTACTTGATGCCTAGATGTCTTTGTATCAGTTTGAATGTATTGATGTCTGTGGATTaGAGTGCTCCCAAGCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NYFEWYLMPRCLCISLNVLMSVD*SAPKPP Trigger: AGGAGGCTTGGGAGCACTGCAATCCACAGACATCAA...TACATTCAAACTGATACAAAGACATCTAGGCATCAAGTACCACTCAAAGTAGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS-3UTR CCA 90 bp | TTTCACAACTTGAAGCCTAGTTGTCCTGATAGTATATCTGTGCTTAGTTTTCACCCTGGAGAGTTCCTTTaGCAGAATAGGCTGCATATG | + |
|
Preference number: 4 (lower is better) Translates to: FHNLKPSCPDSISVLSFHPGEFL*QNRLHM Trigger: CATATGCAGCCTATTCTGCCAAAGGAACTCTCCAGG...GTGAAAACTAAGCACAGATATACTATCAGGACAACTAGGCTTCAAGTTGTGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS-3UTR TCA 90 bp | TTTCACAACTTGAAGCCTAGTTGTCCTGATAGTATATCTGTGCTTAGTTTTCACTCAAGGGCAGTGGCTTaGAGTTCATCATTGTCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: FHNLKPSCPDSISVLSFHSRAVA*SSSLSK Trigger: CTTAGACAATGATGAACTTCAAGCCACTGCCCTTGA...GTGAAAACTAAGCACAGATATACTATCAGGACAACTAGGCTTCAAGTTGTGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS-3UTR TCA 90 bp | ATGTCCACATTTCCCCATTCATCTTGCTCCAGTACTGCATCTGATTTGTATAGTTTGAAAAGTCTCATTTaGTGTCTGTGGATTGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: MSTFPHSSCSSTASDLYSLKSLI*CLWIAV Trigger: CACTGCAATCCACAGACATCAAATGAGACTTTTCAA...ACTATACAAATCAGATGCAGTACTGGAGCAAGATGAATGGGGAAATGTGGACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS-3UTR TCA 90 bp | TGTCCACATTTCCCCATTCATCTTGCTCCAGTACTGCATCTGATTTGTATAGTGGAAGGAAATATGAGCTaGATTAATGCTATTCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: CPHFPIHLAPVLHLICIVEGNMS*INAIQH Trigger: GTGCTGAATAGCATTAATTCAGCTCATATTTCCTTC...CACTATACAAATCAGATGCAGTACTGGAGCAAGATGAATGGGGAAATGTGGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS-3UTR TCA 90 bp | ATGTCCACATTTCCCCATTCATCTTGCTCCAGTACTGCATCTGATTTGTATAGTCATCCAGTCCTACTTTaGAGGAAATATGAGCTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: MSTFPHSSCSSTASDLYSHPVLL*RKYELN Trigger: ATTCAGCTCATATTTCCTTCAAAGTAGGACTGGATG...ACTATACAAATCAGATGCAGTACTGGAGCAAGATGAATGGGGAAATGTGGACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS-3UTR GCA 90 bp | TGTCCACATTTCCCCATTCATCTTGCTCCAGTACTGCATCTGATTTGTATAGTGGCCATCTTTTTACCTTaGAAAGACATGTTAGGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: CPHFPIHLAPVLHLICIVAIFLP*KDMLGK Trigger: CTTACCTAACATGTCTTTGCAAGGTAAAAAGATGGC...CACTATACAAATCAGATGCAGTACTGGAGCAAGATGAATGGGGAAATGTGGACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS-3UTR GCA 90 bp | ATGTCCACATTTCCCCATTCATCTTGCTCCAGTACTGCATCTGATTTGTATAGTATCTTCCAAGCCCAATaGAATCCAGTGACTCTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: MSTFPHSSCSSTASDLYSIFQAQ*NPVTLN Trigger: ATTAAGAGTCACTGGATTGCATTGGGCTTGGAAGAT...ACTATACAAATCAGATGCAGTACTGGAGCAAGATGAATGGGGAAATGTGGACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS-3UTR CCA 90 bp | ATGTCCACATTTCCCCATTCATCTTGCTCCAGTACTGCATCTGATTTGTATAGTCTAAATCAAGGGCAGTaGCTTGAAGTTCATCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: MSTFPHSSCSSTASDLYSLNQGQ*LEVHHC Trigger: ACAATGATGAACTTCAAGCCACTGCCCTTGATTTAG...ACTATACAAATCAGATGCAGTACTGGAGCAAGATGAATGGGGAAATGTGGACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS-3UTR CCA 90 bp | TCTTTCTTTCTGACTTCTGGCATCATATACAGTCATTCCTCAGACTTTGTGCTATTACTGCAGTACTGCTaGCCCATTCTTGACCTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: SFFLTSGIIYSHSSDFVLLLQYC*PILDLY Trigger: ATAAAGGTCAAGAATGGGCCAGCAGTACTGCAGTAA...TAGCACAAAGTCTGAGGAATGACTGTATATGATGCCAGAAGTCAGAAAGAAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| 3UTR CAA 72 bp | GAGAAAGCAACCACTAATAATGGTGGGAGATGGTCCTaGCCAATCACTTACCCAATGATGGTTAATTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: EKATTNNGGRWS*PITYPMMVNSF Trigger: AAAAGAATTAACCATCATTGGGTAAGTGATTGGCAAGGACCATCTCCCACCATTATTAGTGGTTGCTTTCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| 3UTR CAA 72 bp | GAGTGGTACTTGATGCCTAGATGTCTTTGTATCAGTTaGAATGTACTACCAATTCACACACCACTTGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: EWYLMPRCLCIS*NVLPIHTPLVT Trigger: AGTGACAAGTGGTGTGTGAATTGGTAGTACATTCAAACTGATACAAAGACATCTAGGCATCAAGTACCACTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| 3UTR CAA 72 bp | AATAACAAATTAGAGAAGTCATGCATTTCTTTGGCTTaGCTGAGTATAATTTGGGAGTGGGGGTGTAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: NNKLEKSCISLA*LSIIWEWGCRG Trigger: TCCCCTACACCCCCACTCCCAAATTATACTCAGCAAAGCCAAAGAAATGCATGACTTCTCTAATTTGTTATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS-3UTR TCA 90 bp | TTTCACAACTTGAAGCCTAGTTGTCCTGATAGTATATCTGTGCTTAGTTTTCACTTCTTCTCCAGGTCTTaGAGGATGTCATTCAGCATT | + |
|
Preference number: 4 (lower is better) Translates to: FHNLKPSCPDSISVLSFHFFSRS*RMSFSI Trigger: AATGCTGAATGACATCCTTCAAGACCTGGAGAAGAA...GTGAAAACTAAGCACAGATATACTATCAGGACAACTAGGCTTCAAGTTGTGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS-3UTR TCA 90 bp | AACTACTTTGAGTGGTACTTGATGCCTAGATGTCTTTGTATCAGTTTGAATGTATTGGACAGGGCCTCTTaGAAAGTCTCATTTGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: NYFEWYLMPRCLCISLNVLDRAS*KVSFDV Trigger: GACATCAAATGAGACTTTTCAAGAGGCCCTGTCCAA...TACATTCAAACTGATACAAAGACATCTAGGCATCAAGTACCACTCAAAGTAGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS-3UTR CCA 90 bp | TTTCACAACTTGAAGCCTAGTTGTCCTGATAGTATATCTGTGCTTAGTTTTCACAACAATAGTGCGTTCTaGTCTCCATCCTTTCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: FHNLKPSCPDSISVLSFHNNSAF*SPSFLH Trigger: GTGAAGAAAGGATGGAGACCAGAACGCACTATTGTT...GTGAAAACTAAGCACAGATATACTATCAGGACAACTAGGCTTCAAGTTGTGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| 3UTR CAA 72 bp | CTTTGTGCTATTTGCCCGGATATTCTGGGAACATTTTaGTCAAGTATATTCAACATAGGATCTTGTCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LCAICPDILGTF*SSIFNIGSCLA Trigger: TGCCAGACAAGATCCTATGTTGAATATACTTGACAAAAATGTTCCCAGAATATCCGGGCAAATAGCACAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| 3UTR CAA 72 bp | GCATCATATACAGTCATTCCTCAGACTTTGTGCTATTaGCCCGGATATTCTGGGAACATTTTTGTCAAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: ASYTVIPQTLCY*PGYSGNIFVKY Trigger: ATACTTGACAAAAATGTTCCCAGAATATCCGGGCAAATAGCACAAAGTCTGAGGAATGACTGTATATGATGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| 3UTR CAA 72 bp | GTGTATGTGATATATTTGAAGACTAGGCATGGGGAATaGAATCCCTTAGTGAAAGCATTTATGTACTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VYVIYLKTRHGE*NPLVKAFMYSQ Trigger: CTGGGAGTACATAAATGCTTTCACTAAGGGATTCAATTCCCCATGCCTAGTCTTCAAATATATCACATACAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS-3UTR TCA 90 bp | TTTCACAACTTGAAGCCTAGTTGTCCTGATAGTATATCTGTGCTTAGTTTTCACGACCCTCTAATGTTTTaGTGTCCTCATAAGCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: FHNLKPSCPDSISVLSFHDPLMF*CPHKQT Trigger: AGTTTGCTTATGAGGACATCAAAACATTAGAGGGTC...GTGAAAACTAAGCACAGATATACTATCAGGACAACTAGGCTTCAAGTTGTGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS-3UTR GCA 90 bp | ATGTCCACATTTCCCCATTCATCTTGCTCCAGTACTGCATCTGATTTGTATAGTCATAGCTTCAATAAATaGTGTGATTACTGCAGTACT | + |
|
Preference number: 4 (lower is better) Translates to: MSTFPHSSCSSTASDLYSHSFNK*CDYCST Trigger: AGTACTGCAGTAATCACAGCATTTATTGAAGCTATG...ACTATACAAATCAGATGCAGTACTGGAGCAAGATGAATGGGGAAATGTGGACAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS-3UTR CCA 90 bp | AGCAAGACAAACAGACAAACACCTGGTCAAATTAGAGCTTTTTCTGTTACAATTATTTCTATAAAAACCTaGTGGTACCCACTGCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: SKTNRQTPGQIRAFSVTIISIKT*WYPLHQ Trigger: CTGGTGCAGTGGGTACCACCAGGTTTTTATAGAAAT...AATTGTAACAGAAAAAGCTCTAATTTGACCAGGTGTTTGTCTGTTTGTCTTGCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| 3UTR CAA 72 bp | CAAAATGTGTCACTTTGGGAAGAATTTACATTTAAATaGCTCCATCTAGTTTCTTGGGAATTTCCCCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: QNVSLWEEFTFK*LHLVSWEFPPW Trigger: CCAAGGGGGAAATTCCCAAGAAACTAGATGGAGCAATTTAAATGTAAATTCTTCCCAAAGTGACACATTTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| 3UTR CAA 72 bp | GTCTCATTAAATCTGGGTTCTTCCTTGTTAAATCGGTaGCTATATAGTCAACTAAGGGGAACAAAAGTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: VSLNLGSSLLNR*LYSQLRGTKVS Trigger: GCTTACTTTTGTTCCCCTTAGTTGACTATATAGCAACCGATTTAACAAGGAAGAACCCAGATTTAATGAGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS-3UTR TCA 90 bp | AGCAAGACAAACAGACAAACACCTGGTCAAATTAGAGCTTTTTCTGTTACAATTCCTTTAAGGCTGTTTTaGACTCCTAATGCTATATCG | + |
|
Preference number: 4 (lower is better) Translates to: SKTNRQTPGQIRAFSVTIPLRLF*TPNAIS Trigger: CGATATAGCATTAGGAGTTCAAAACAGCCTTAAAGG...AATTGTAACAGAAAAAGCTCTAATTTGACCAGGTGTTTGTCTGTTTGTCTTGCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| 3UTR CAA 72 bp | TGCAAAAAGTTAACATGTTACGCATCTGAAAATGTCTaGAGACAAACATGTCAGAGTTGCGATACATGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: CKKLTCYASENV*RQTCQSCDTCC Trigger: ACAACATGTATCGCAACTCTGACATGTTTGTCTCAAGACATTTTCAGATGCGTAACATGTTAACTTTTTGCA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| 3UTR CAA 72 bp | TGGGCATATTTCTACATGAACTACTTTGAGTGGTACTaGATGCCTAGATGTCTTTGTATCAGTTTGAATGTA | + |
|
Preference number: 4 (lower is better) Translates to: WAYFYMNYFEWY*MPRCLCISLNV Trigger: TACATTCAAACTGATACAAAGACATCTAGGCATCAAGTACCACTCAAAGTAGTTCATGTAGAAATATGCCCA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| 3UTR CAA 72 bp | AATTCTGAAGATGTCTCATTAAATCTGGGTTCTTCCTaGTTAAATCGGTTGCTATATAGTCAACTAAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: NSEDVSLNLGSS*LNRLLYSQLRG Trigger: TCCCCTTAGTTGACTATATAGCAACCGATTTAACAAGGAAGAACCCAGATTTAATGAGACATCTTCAGAATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS TCA 90 bp | AAACCTGGTGGTACCCACTGCACCAGGAAGTTCTTCTCCAGGTCTTaGAGGATGTCATTCAGCATTCGGACACGGCTGGGAGCTCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: KPGGTHCTRKFFSRS*RMSFSIRTRLGALS Trigger: GGAGAGAGCTCCCAGCCGTGTCCGAATGCTGAATGACATCCTTCAAGACCTGGAGAAGAACTTCCTGGTGCAGTGGGTACCACCAGGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS CCA 90 bp | GGAGCTCTCTCCTTTGGGTCATTAGCAGGTCGCATCTCATCTGACTaGAAGAGCTCTGCACTTTCCCTCAGTCTTGATGCTAAGGCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: GALSFGSLAGRISSD*KSSALSLSLDAKAS Trigger: GCTTGCCTTAGCATCAAGACTGAGGGAAAGTGCAGAGCTCTTCCAGTCAGATGAGATGCGACCTGCTAATGACCCAAAGGAGAGAGCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS TCA 90 bp | GATGACATCACCCTGGAGAGTTCCTTTGGCAGAATAGGCTGCATATaGGAAGAACAGATCTTGGCTGTGGCCTCCTCTGGCTTCTTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: DDITLESSFGRIGCI*EEQILAVASSGFFP Trigger: AGGGAAGAAGCCAGAGGAGGCCACAGCCAAGATCTGTTCTTCTCATATGCAGCCTATTCTGCCAAAGGAACTCTCCAGGGTGATGTCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS TCA 90 bp | TCCTCCTGGATTCAGAGTCACCACAAAAGGCTCAGAGCTAAGGACTaGAGACTCTGCTGCATCACAGGGATCAATGTAGAGAAGCGCACC | + |
|
Preference number: 5 (lower is better) Translates to: SSWIQSHHKRLRAKD*RLCCITGINVEKRT Trigger: GGTGCGCTTCTCTACATTGATCCCTGTGATGCAGCAGAGTCTTCAGTCCTTAGCTCTGAGCCTTTTGTGGTGACTCTGAATCCAGGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS CCA 90 bp | AATAGGCTGCATATGAGAAGAACAGATCTTGGCTGTGGCCTCCTCTaGCTTCTTCCCTGCAAGGTTGGCCATCAGGATAAAAGCACTGGC | + |
|
Preference number: 5 (lower is better) Translates to: NRLHMRRTDLGCGLL*LLPCKVGHQDKSTG Trigger: GCCAGTGCTTTTATCCTGATGGCCAACCTTGCAGGGAAGAAGCCAGAGGAGGCCACAGCCAAGATCTGTTCTTCTCATATGCAGCCTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS CCA 90 bp | GTCCAAAGTCTCAGAGTGCCCCAAGTTCTGATGCTCAGCACTATCTaGTTGAAACTGATCAAAGCCCGGCTCTTCCAGTTCCTTCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: VQSLRVPQVLMLSTI*LKLIKARLFQFLLH Trigger: ATGGAGAAGGAACTGGAAGAGCCGGGCTTTGATCAGTTTCAACCAGATAGTGCTGAGCATCAGAACTTGGGGCACTCTGAGACTTTGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS CCA 90 bp | GCTCTCTGCATGCACGTGAACTTAATTTTCTCTATAACCAGTTGCTaGAGCGATGGAGACACTACTGGATATAGACTGGAGTTGCCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: ALCMHVNLIFSITSC*SDGDTTGYRLELPR Trigger: CCGGGGCAACTCCAGTCTATATCCAGTAGTGTCTCCATCGCTCCAGCAACTGGTTATAGAGAAAATTAAGTTCACGTGCATGCAGAGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS TCA 90 bp | GCATCACCTTGTATCTGCACAGAGCTGACATTGGCTCCCAGGCACTaGGCTCTCTGCATGCACGTGAACTTAATTTTCTCTATAACCAGT | + |
|
Preference number: 5 (lower is better) Translates to: ASPCICTELTLAPRH*ALCMHVNLIFSITS Trigger: ACTGGTTATAGAGAAAATTAAGTTCACGTGCATGCAGAGAGCTCAGTGCCTGGGAGCCAATGTCAGCTCTGTGCAGATACAAGGTGATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS CCA 90 bp | CTTGAAGCCTCTGAAATCTTCCTTTGGGTGACGTTGCTGGTTGAATaGAATCAAGATGGAGGTCCAAAGTCTCAGAGTGCCCCAAGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LEASEIFLWVTLLVE*NQDGGPKSQSAPSS Trigger: AGAACTTGGGGCACTCTGAGACTTTGGACCTCCATCTTGATTCCATTCAACCAGCAACGTCACCCAAAGGAAGATTTCAGAGGCTTCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS CCA 90 bp | GGGTCACACAGTCAGACTCTTCTTGAAGCCTCTGAAATCTTCCTTTaGGTGACGTTGCTGGTTGAATGGAATCAAGATGGAGGTCCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: GSHSQTLLEASEIFL*VTLLVEWNQDGGPK Trigger: CTTTGGACCTCCATCTTGATTCCATTCAACCAGCAACGTCACCCAAAGGAAGATTTCAGAGGCTTCAAGAAGAGTCTGACTGTGTGACCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS TCA 90 bp | CACACAGTCAGACTCTTCTTGAAGCCTCTGAAATCTTCCTTTGGGTaGCGTTGCTGGTTGAATGGAATCAAGATGGAGGTCCAAAGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: HTVRLFLKPLKSSFG*RCWLNGIKMEVQSL Trigger: GAGACTTTGGACCTCCATCTTGATTCCATTCAACCAGCAACGTCACCCAAAGGAAGATTTCAGAGGCTTCAAGAAGAGTCTGACTGTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS GCA 90 bp | TTTGGCAAAGAGATGAGCATTTTAACGAGGGATGGAGAGATAGGCTaGACTAGCAGGGAGGTGAGGTTTGTTCGGCTTTTTCTAAAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: FGKEMSILTRDGEIG*TSREVRFVRLFLKL Trigger: AAGCTTTAGAAAAAGCCGAACAAACCTCACCTCCCTGCTAGTGCAGCCTATCTCTCCATCCCTCGTTAAAATGCTCATCTCTTTGCCAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS TCA 90 bp | TCCAGTTCCTTCTCCATATCCCACTCTAAATCAAGGGCAGTGGCTTaGAGTTCATCATTGTCTAAGTACTGTGAATGTCCTGAGGTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: SSSFSISHSKSRAVA*SSSLSKYCECPEVL Trigger: AAGAACCTCAGGACATTCACAGTACTTAGACAATGATGAACTTCAAGCCACTGCCCTTGATTTAGAGTGGGATATGGAGAAGGAACTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS CCA 90 bp | TGTCTTCTCATCAAGATGGTACAGGATATTTCTATAAAAACCTGGTaGTACCCACTGCACCAGGAAGTTCTTCTCCAGGTCTTGAAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: CLLIKMVQDISIKTW*YPLHQEVLLQVLKD Trigger: ATCCTTCAAGACCTGGAGAAGAACTTCCTGGTGCAGTGGGTACCACCAGGTTTTTATAGAAATATCCTGTACCATCTTGATGAGAAGACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS CCA 90 bp | GTTTGTCTTCTCATCAAGATGGTACAGGATATTTCTATAAAAACCTaGTGGTACCCACTGCACCAGGAAGTTCTTCTCCAGGTCTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: VCLLIKMVQDISIKT*WYPLHQEVLLQVLK Trigger: CTTCAAGACCTGGAGAAGAACTTCCTGGTGCAGTGGGTACCACCAGGTTTTTATAGAAATATCCTGTACCATCTTGATGAGAAGACAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS-3UTR CAA 90 bp | TCTTTCTTTCTGACTTCTGGCATCATATACAGTCATTCCTCAGACTTTGTGCTACTCAGCACTATCTGGTaGAAACTGATCAAAGCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: SFFLTSGIIYSHSSDFVLLSTIW*KLIKAR Trigger: CCGGGCTTTGATCAGTTTCAACCAGATAGTGCTGAG...TAGCACAAAGTCTGAGGAATGACTGTATATGATGCCAGAAGTCAGAAAGAAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS-3UTR CAA 90 bp | CTGGCATCATATACAGTCATTCCTCAGACTTTGTGCTATTTGCCCGGATATTCTATAATCAGCATCACCTaGTATCTGCACAGAGCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: LASYTVIPQTLCYLPGYSIISIT*YLHRAD Trigger: GTCAGCTCTGTGCAGATACAAGGTGATGCTGATTAT...AGAATATCCGGGCAAATAGCACAAAGTCTGAGGAATGACTGTATATGATGCCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS-3UTR CAA 90 bp | CTGGCATCATATACAGTCATTCCTCAGACTTTGTGCTATTTGCCCGGATATTCTGTTCTTCTCCAGGTCTaGAAGGATGTCATTCAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: LASYTVIPQTLCYLPGYSVLLQV*KDVIQH Trigger: ATGCTGAATGACATCCTTCAAGACCTGGAGAAGAAC...AGAATATCCGGGCAAATAGCACAAAGTCTGAGGAATGACTGTATATGATGCCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS TCA 90 bp | GACACTCTCAAACACATCCAGTCCTACTTTGAAGGAAATATGAGCTaGATTAATGCTATTCAGCACATTGGACAGGGCCTCTTGAAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: DTLKHIQSYFEGNMS*INAIQHIGQGLLKS Trigger: ACTTTTCAAGAGGCCCTGTCCAATGTGCTGAATAGCATTAATTCAGCTCATATTTCCTTCAAAGTAGGACTGGATGTGTTTGAGAGTGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS-3UTR CAA 90 bp | TCTTTCTTTCTGACTTCTGGCATCATATACAGTCATTCCTCAGACTTTGTGCTATTCCTTTGGGTGACGTaGCTGGTTGAATGGAATCAA | + |
|
Preference number: 5 (lower is better) Translates to: SFFLTSGIIYSHSSDFVLFLWVT*LVEWNQ Trigger: TTGATTCCATTCAACCAGCAACGTCACCCAAAGGAA...TAGCACAAAGTCTGAGGAATGACTGTATATGATGCCAGAAGTCAGAAAGAAAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS-3UTR CAA 90 bp | AACTACTTTGAGTGGTACTTGATGCCTAGATGTCTTTGTATCAGTTTGAATGTAACAGTCAGACTCTTCTaGAAGCCTCTGAAATCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: NYFEWYLMPRCLCISLNVTVRLF*KPLKSS Trigger: GGAAGATTTCAGAGGCTTCAAGAAGAGTCTGACTGT...TACATTCAAACTGATACAAAGACATCTAGGCATCAAGTACCACTCAAAGTAGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS-3UTR CAA 90 bp | AACTACTTTGAGTGGTACTTGATGCCTAGATGTCTTTGTATCAGTTTGAATGTATGCAGTGGTTGTTCTTaGGTGCAGATCTTGTGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: NYFEWYLMPRCLCISLNVCSGCS*VQILCS Trigger: ACTACACAAGATCTGCACCAAAGAACAACCACTGCA...TACATTCAAACTGATACAAAGACATCTAGGCATCAAGTACCACTCAAAGTAGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS-3UTR CAA 90 bp | TTTCACAACTTGAAGCCTAGTTGTCCTGATAGTATATCTGTGCTTAGTTTTCACCAAAAACTGCAGTGGTaGTTCTTTGGTGCAGATCTT | + |
|
Preference number: 5 (lower is better) Translates to: FHNLKPSCPDSISVLSFHQKLQW*FFGADL Trigger: AAGATCTGCACCAAAGAACAACCACTGCAGTTTTTG...GTGAAAACTAAGCACAGATATACTATCAGGACAACTAGGCTTCAAGTTGTGAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS-3UTR CAA 90 bp | TCTTTCTTTCTGACTTCTGGCATCATATACAGTCATTCCTCAGACTTTGTGCTAGAATGGAAAACTGGTTaGTCTTCTCATCAAGATGGT | + |
|
Preference number: 5 (lower is better) Translates to: SFFLTSGIIYSHSSDFVLEWKTG*SSHQDG Trigger: ACCATCTTGATGAGAAGACAAACCAGTTTTCCATTC...TAGCACAAAGTCTGAGGAATGACTGTATATGATGCCAGAAGTCAGAAAGAAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS GCA 72 bp | ACAGATCTTGGCTGTGGCCTCCTCTGGCTTCTTCCCTaGAAGGTTGGCCATCAGGATAAAAGCACTGGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: TDLGCGLLWLLP*KVGHQDKSTGQ Trigger: CTGGCCAGTGCTTTTATCCTGATGGCCAACCTTGCAGGGAAGAAGCCAGAGGAGGCCACAGCCAAGATCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS TCA 72 bp | GGTACCCACTGCACCAGGAAGTTCTTCTCCAGGTCTTaGAGGATGTCATTCAGCATTCGGACACGGCTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: GTHCTRKFFSRS*RMSFSIRTRLG Trigger: TCCCAGCCGTGTCCGAATGCTGAATGACATCCTTCAAGACCTGGAGAAGAACTTCCTGGTGCAGTGGGTACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS CCA 72 bp | GTTGCTGGAGCGATGGAGACACTACTGGATATAGACTaGAGTTGCCCCGGATGGGGCTATGAAGGCCAATGT | + |
|
Preference number: 6 (lower is better) Translates to: VAGAMETLLDID*SCPGWGYEGQC Trigger: ACATTGGCCTTCATAGCCCCATCCGGGGCAACTCCAGTCTATATCCAGTAGTGTCTCCATCGCTCCAGCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS CAA 72 bp | TGGTACCCACTGCACCAGGAAGTTCTTCTCCAGGTCTaGAAGGATGTCATTCAGCATTCGGACACGGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: WYPLHQEVLLQV*KDVIQHSDTAG Trigger: CCCAGCCGTGTCCGAATGCTGAATGACATCCTTCAAGACCTGGAGAAGAACTTCCTGGTGCAGTGGGTACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS CAA 90 bp | AAAACCTGGTGGTACCCACTGCACCAGGAAGTTCTTCTCCAGGTCTaGAAGGATGTCATTCAGCATTCGGACACGGCTGGGAGCTCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: KTWWYPLHQEVLLQV*KDVIQHSDTAGSSL Trigger: GAGAGAGCTCCCAGCCGTGTCCGAATGCTGAATGACATCCTTCAAGACCTGGAGAAGAACTTCCTGGTGCAGTGGGTACCACCAGGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS CCA 72 bp | TCCTTTGGGTCATTAGCAGGTCGCATCTCATCTGACTaGAAGAGCTCTGCACTTTCCCTCAGTCTTGATGCT | + |
|
Preference number: 6 (lower is better) Translates to: SFGSLAGRISSD*KSSALSLSLDA Trigger: AGCATCAAGACTGAGGGAAAGTGCAGAGCTCTTCCAGTCAGATGAGATGCGACCTGCTAATGACCCAAAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
||
| CDS CAA 72 bp | TCAGCACATTGGACAGGGCCTCTTGAAAAGTCTCATTaGATGTCTGTGGATTGCAGTGCTCCCAAGCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: SAHWTGPLEKSH*MSVDCSAPKPP Trigger: AGGAGGCTTGGGAGCACTGCAATCCACAGACATCAAATGAGACTTTTCAAGAGGCCCTGTCCAATGTGCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
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| CDS CAA 90 bp | CAAAGTCTCAGAGTGCCCCAAGTTCTGATGCTCAGCACTATCTGGTaGAAACTGATCAAAGCCCGGCTCTTCCAGTTCCTTCTCCATATC | + |
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Preference number: 6 (lower is better) Translates to: QSLRVPQVLMLSTIW*KLIKARLFQFLLHI Trigger: GATATGGAGAAGGAACTGGAAGAGCCGGGCTTTGATCAGTTTCAACCAGATAGTGCTGAGCATCAGAACTTGGGGCACTCTGAGACTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
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| CDS TCA 72 bp | TGTATCTGCACAGAGCTGACATTGGCTCCCAGGCACTaGGCTCTCTGCATGCACGTGAACTTAATTTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: CICTELTLAPRH*ALCMHVNLIFS Trigger: AGAGAAAATTAAGTTCACGTGCATGCAGAGAGCTCAGTGCCTGGGAGCCAATGTCAGCTCTGTGCAGATACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
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| CDS GCA 72 bp | GAGATGAGCATTTTAACGAGGGATGGAGAGATAGGCTaGACTAGCAGGGAGGTGAGGTTTGTTCGGCTTTTT | + |
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Preference number: 6 (lower is better) Translates to: EMSILTRDGEIG*TSREVRFVRLF Trigger: AAAAAGCCGAACAAACCTCACCTCCCTGCTAGTGCAGCCTATCTCTCCATCCCTCGTTAAAATGCTCATCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
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| CDS CAA 90 bp | CACAGTTGGAACTCCAAGATGGTTGATGAAATAATCAGCATCACCTaGTATCTGCACAGAGCTGACATTGGCTCCCAGGCACTGAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: HSWNSKMVDEIISIT*YLHRADIGSQALSS Trigger: AGAGCTCAGTGCCTGGGAGCCAATGTCAGCTCTGTGCAGATACAAGGTGATGCTGATTATTTCATCAACCATCTTGGAGTTCCAACTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
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| CDS TCA 72 bp | ATTCAGAGTCACCACAAAAGGCTCAGAGCTAAGGACTaGAGACTCTGCTGCATCACAGGGATCAATGTAGAG | + |
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Preference number: 6 (lower is better) Translates to: IQSHHKRLRAKD*RLCCITGINVE Trigger: CTCTACATTGATCCCTGTGATGCAGCAGAGTCTTCAGTCCTTAGCTCTGAGCCTTTTGTGGTGACTCTGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
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| CDS CCA 72 bp | TCTGAAATCTTCCTTTGGGTGACGTTGCTGGTTGAATaGAATCAAGATGGAGGTCCAAAGTCTCAGAGTGCC | + |
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Preference number: 6 (lower is better) Translates to: SEIFLWVTLLVE*NQDGGPKSQSA Trigger: GGCACTCTGAGACTTTGGACCTCCATCTTGATTCCATTCAACCAGCAACGTCACCCAAAGGAAGATTTCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
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| CDS CAA 90 bp | AGTCAGACTCTTCTTGAAGCCTCTGAAATCTTCCTTTGGGTGACGTaGCTGGTTGAATGGAATCAAGATGGAGGTCCAAAGTCTCAGAGT | + |
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Preference number: 6 (lower is better) Translates to: SQTLLEASEIFLWVT*LVEWNQDGGPKSQS Trigger: ACTCTGAGACTTTGGACCTCCATCTTGATTCCATTCAACCAGCAACGTCACCCAAAGGAAGATTTCAGAGGCTTCAAGAAGAGTCTGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
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| CDS CAA 72 bp | AACTCCAAGATGGTTGATGAAATAATCAGCATCACCTaGTATCTGCACAGAGCTGACATTGGCTCCCAGGCA | + |
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Preference number: 6 (lower is better) Translates to: NSKMVDEIISIT*YLHRADIGSQA Trigger: TGCCTGGGAGCCAATGTCAGCTCTGTGCAGATACAAGGTGATGCTGATTATTTCATCAACCATCTTGGAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
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| CDS CCA 72 bp | CTCATCAAGATGGTACAGGATATTTCTATAAAAACCTaGTGGTACCCACTGCACCAGGAAGTTCTTCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: LIKMVQDISIKT*WYPLHQEVLLQ Trigger: CTGGAGAAGAACTTCCTGGTGCAGTGGGTACCACCAGGTTTTTATAGAAATATCCTGTACCATCTTGATGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
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| CDS CAA 90 bp | TTAACATGTAGCAAAAACTGCAGTGGTTGTTCTTTGGTGCAGATCTaGTGTAGTGGGTCACACAGTCAGACTCTTCTTGAAGCCTCTGAA | + |
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Preference number: 6 (lower is better) Translates to: LTCSKNCSGCSLVQI*CSGSHSQTLLEASE Trigger: TTCAGAGGCTTCAAGAAGAGTCTGACTGTGTGACCCACTACACAAGATCTGCACCAAAGAACAACCACTGCAGTTTTTGCTACATGTTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
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| CDS CAA 90 bp | AGCTTCAATAAATGCTGTGATTACTGCAGTACTGCTGGCCCATTCTaGACCTTTATAACTGTATCCAGCATGGTGGTTGCTGCCAACTAT | + |
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Preference number: 6 (lower is better) Translates to: SFNKCCDYCSTAGPF*TFITVSSMVVAANY Trigger: ATAGTTGGCAGCAACCACCATGCTGGATACAGTTATAAAGGTCAAGAATGGGCCAGCAGTACTGCAGTAATCACAGCATTTATTGAAGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
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| CDS GCA 72 bp | TGCATGCACGTGAACTTAATTTTCTCTATAACCAGTTaGTGGAGCGATGGAGACACTACTGGATATAGACTG | + |
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Preference number: 6 (lower is better) Translates to: CMHVNLIFSITS*WSDGDTTGYRL Trigger: CAGTCTATATCCAGTAGTGTCTCCATCGCTCCAGCAACTGGTTATAGAGAAAATTAAGTTCACGTGCATGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
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| CDS CCA 72 bp | ATGCACGTGAACTTAATTTTCTCTATAACCAGTTGCTaGAGCGATGGAGACACTACTGGATATAGACTGGAG | + |
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Preference number: 6 (lower is better) Translates to: MHVNLIFSITSC*SDGDTTGYRLE Trigger: CTCCAGTCTATATCCAGTAGTGTCTCCATCGCTCCAGCAACTGGTTATAGAGAAAATTAAGTTCACGTGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
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| CDS TCA 72 bp | AAACACATCCAGTCCTACTTTGAAGGAAATATGAGCTaGATTAATGCTATTCAGCACATTGGACAGGGCCTC | + |
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Preference number: 6 (lower is better) Translates to: KHIQSYFEGNMS*INAIQHIGQGL Trigger: GAGGCCCTGTCCAATGTGCTGAATAGCATTAATTCAGCTCATATTTCCTTCAAAGTAGGACTGGATGTGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
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| CDS CCA 72 bp | GTTCCTTCTCCATATCCCACTCTAAATCAAGGGCAGTaGCTTGAAGTTCATCATTGTCTAAGTACTGTGAAT | + |
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Preference number: 6 (lower is better) Translates to: VPSPYPTLNQGQ*LEVHHCLSTVN Trigger: ATTCACAGTACTTAGACAATGATGAACTTCAAGCCACTGCCCTTGATTTAGAGTGGGATATGGAGAAGGAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
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| CDS TCA 72 bp | GGCTGTTTTGAACTCCTAATGCTATATCGAGGGCATTaGAGGGCAGTATTGGTTCATTGGCAATTTGTAAAA | + |
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Preference number: 6 (lower is better) Translates to: GCFELLMLYRGH*RAVLVHWQFVK Trigger: TTTTACAAATTGCCAATGAACCAATACTGCCCTTCAATGCCCTCGATATAGCATTAGGAGTTCAAAACAGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
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| CDS TCA 72 bp | ATAAACTGTGTATCTTCCAAGCCCAATGCAATCCAGTaGCTCTTAATCTTCTTTGCAATTTCCATGTCATCC | + |
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Preference number: 6 (lower is better) Translates to: INCVSSKPNAIQ*LLIFFAISMSS Trigger: GGATGACATGGAAATTGCAAAGAAGATTAAGAGTCACTGGATTGCATTGGGCTTGGAAGATACACAGTTTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
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| CDS CAA 72 bp | TTGTCTTCAGAATATCTTGGTATAACTGAGGGTTATTaGTTCCTGATGGTGAGGCATCAGAAGGACAATTCA | + |
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Preference number: 6 (lower is better) Translates to: LSSEYLGITEGY*FLMVRHQKDNS Trigger: TGAATTGTCCTTCTGATGCCTCACCATCAGGAACAAATAACCCTCAGTTATACCAAGATATTCTGAAGACAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203414.2 |
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