Pregenerated sensors for NAALADL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000054999Ensembl transcript IDs: ENSMUST00000044451.4
Found 127 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | GGAAGAAGAAAGCAGGCTGAACAATGGGCTAGACTCTACACTACTTaGGGCCCCAGTTTCACCCACTACCGTGAGCAGGTGTCCTTAACT | + |
|
Preference number: 2 (lower is better) Translates to: GRRKQAEQWARLYTT*GPSFTHYREQVSLT Trigger: AGTTAAGGACACCTGCTCACGGTAGTGGGTGAAACTGGGGCCCAAAGTAGTGTAGAGTCTAGCCCATTGTTCAGCCTGCTTTCTTCTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| 3UTR-3UTR TCA 90 bp | GGGGAAGAAGAAAGCAGGCTGAACAATGGGCTAGACTCTACACTACTTTGGGCCGTTGCTTTAAAAGCTTaGGTGTTTGCTGATCTACCT | + |
|
Preference number: 2 (lower is better) Translates to: GEEESRLNNGLDSTLLWAVALKA*VFADLP Trigger: AGGTAGATCAGCAAACACTCAAGCTTTTAAAGCAAC...GGCCCAAAGTAGTGTAGAGTCTAGCCCATTGTTCAGCCTGCTTTCTTCTTCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| 3UTR TCA 72 bp | CTACACTACTTTGGGCCCCAGTTTCACCCACTACCGTaGGCAGGTGTCCTTAACTGCAGGGACCCCAGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: LHYFGPQFHPLP*AGVLNCRDPSC Trigger: ACAGCTGGGGTCCCTGCAGTTAAGGACACCTGCTCACGGTAGTGGGTGAAACTGGGGCCCAAAGTAGTGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| 3UTR TCA 72 bp | TTAACTGCAGGGACCCCAGCTGTTGCTTTAAAAGCTTaGGTGTTTGCTGATCTACCTACTCCTGGCCTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: LTAGTPAVALKA*VFADLPTPGLR Trigger: CCTGAGGCCAGGAGTAGGTAGATCAGCAAACACTCAAGCTTTTAAAGCAACAGCTGGGGTCCCTGCAGTTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| 3UTR TCA 72 bp | GACCCCAGCTGTTGCTTTAAAAGCTTGAGTGTTTGCTaGTCTACCTACTCCTGGCCTCAGGAAAGACTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: DPSCCFKSLSVC*STYSWPQERLE Trigger: TTCCAGTCTTTCCTGAGGCCAGGAGTAGGTAGATCAGCAAACACTCAAGCTTTTAAAGCAACAGCTGGGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS-3UTR GCA 90 bp | GGAAGAAGAAAGCAGGCTGAACAATGGGCTAGACTCTACACTACTTTGGGCCCCAGGTACCAGGGTGGCTaGCGCACCCTCCAGGGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: GRRKQAEQWARLYTTLGPRYQGG*RTLQGR Trigger: ACGGCCCTGGAGGGTGCGGCAGCCACCCTGGTACCT...GGGGCCCAAAGTAGTGTAGAGTCTAGCCCATTGTTCAGCCTGCTTTCTTCTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS-3UTR GCA 90 bp | TTGCTGATCTACCTACTCCTGGCCTCAGGAAAGACTGGAACATACAGGTGTGAGCGCCCCAGCAGCAGCTaGACCAGGGCTTCGTCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: LLIYLLLASGKTGTYRCERPSSS*TRASSR Trigger: TCGGGACGAAGCCCTGGTGCAGCTGCTGCTGGGGCG...CTCACACCTGTATGTTCCAGTCTTTCCTGAGGCCAGGAGTAGGTAGATCAGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS-3UTR TCA 90 bp | ACTGGAACATACAGGTGTGAGAGGTGCAAGAAAAAGCCCAAGGGACAGGGCTGGCCACAGCCCCCTGGATaGTGCCCAGGACATTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TGTYRCERCKKKPKGQGWPQPPG*CPGHWK Trigger: CTTCCAATGTCCTGGGCATCATCCAGGGGGCTGTGG...CCAGCCCTGTCCCTTGGGCTTTTTCTTGCACCTCTCACACCTGTATGTTCCAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS-3UTR GCA 90 bp | GCCTCAGGAAAGACTGGAACATACAGGTGTGAGAGGTGCAAGAAAAAGCCCAAGTGCCAGCGCCCAGTGTaGCCAGGCTGGGAACCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: ASGKTGTYRCERCKKKPKCQRPV*PGWEPV Trigger: GACTGGTTCCCAGCCTGGGCACACTGGGCGCTGGCA...CTTGGGCTTTTTCTTGCACCTCTCACACCTGTATGTTCCAGTCTTTCCTGAGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS-3UTR CCA 90 bp | TTGCTGATCTACCTACTCCTGGCCTCAGGAAAGACTGGAACATACAGGTGTGAGCGTCCCGAGGGCTGGTaGCCACGTGTGGTTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLIYLLLASGKTGTYRCERPEGW*PRVVPW Trigger: CCAAGGAACCACACGTGGCCACCAGCCCTCGGGACG...CTCACACCTGTATGTTCCAGTCTTTCCTGAGGCCAGGAGTAGGTAGATCAGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS-3UTR CCA 90 bp | AGTGCAGGGGAAGAAGAAAGCAGGCTGAACAATGGGCTAGACTCTACACTACTTCCACAGGTACCAGGGTaGCTGCCGCACCCTCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SAGEEESRLNNGLDSTLLPQVPG*LPHPPG Trigger: CCCTGGAGGGTGCGGCAGCCACCCTGGTACCTGTGG...AAGTAGTGTAGAGTCTAGCCCATTGTTCAGCCTGCTTTCTTCTTCCCCTGCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS-3UTR TCA 90 bp | GGAAGAAGAAAGCAGGCTGAACAATGGGCTAGACTCTACACTACTTTGGGCCCCGTGCCAAGGGCCTCTTaGGCAGCCTGCAGGAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: GRRKQAEQWARLYTTLGPVPRAS*AACRKL Trigger: GAGTTTCCTGCAGGCTGCTCAAGAGGCCCTTGGCAC...GGGGCCCAAAGTAGTGTAGAGTCTAGCCCATTGTTCAGCCTGCTTTCTTCTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS-3UTR GCA 90 bp | GCCTCAGGAAAGACTGGAACATACAGGTGTGAGAGGTGCAAGAAAAAGCCCAAGCCAAGAGGACAGCAGTaGCACTGCTGGGGTCCACCG | + |
|
Preference number: 4 (lower is better) Translates to: ASGKTGTYRCERCKKKPKPRGQQ*HCWGPP Trigger: CGGTGGACCCCAGCAGTGGCACTGCTGTCCTCTTGG...CTTGGGCTTTTTCTTGCACCTCTCACACCTGTATGTTCCAGTCTTTCCTGAGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS-3UTR GCA 90 bp | GGAAGAAGAAAGCAGGCTGAACAATGGGCTAGACTCTACACTACTTTGGGCCCCGCCACCGTGCGCTCCTaGAGCTTGCTGAGAAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: GRRKQAEQWARLYTTLGPATVRS*SLLRNS Trigger: GGAGTTTCTCAGCAAGCTGCAGGAGCGCACGGTGGC...GGGGCCCAAAGTAGTGTAGAGTCTAGCCCATTGTTCAGCCTGCTTTCTTCTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS-3UTR CCA 90 bp | ACTGGAACATACAGGTGTGAGAGGTGCAAGAAAAAGCCCAAGGGACAGGGCTGGGCTGGTGGCCACGTGTaGTTCCTTGGAGAGTTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: TGTYRCERCKKKPKGQGWAGGHV*FLGEFS Trigger: CGAGAACTCTCCAAGGAACCACACGTGGCCACCAGC...CCAGCCCTGTCCCTTGGGCTTTTTCTTGCACCTCTCACACCTGTATGTTCCAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS-3UTR CCA 90 bp | GGAAGAAGAAAGCAGGCTGAACAATGGGCTAGACTCTACACTACTTTGGGCCCCGGCTCCACAGCCCCCTaGATGATGCCCAGGACATTG | + |
|
Preference number: 4 (lower is better) Translates to: GRRKQAEQWARLYTTLGPGSTAP*MMPRTL Trigger: CAATGTCCTGGGCATCATCCAGGGGGCTGTGGAGCC...GGGGCCCAAAGTAGTGTAGAGTCTAGCCCATTGTTCAGCCTGCTTTCTTCTTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS-3UTR CCA 90 bp | GCAGGGGAAGAAGAAAGCAGGCTGAACAATGGGCTAGACTCTACACTACTTTGGCAGCAGTGCCACTGCTaGGGTCCACCGCCCCATGTA | + |
|
Preference number: 4 (lower is better) Translates to: AGEEESRLNNGLDSTLLWQQCHC*GPPPHV Trigger: TACATGGGGCGGTGGACCCCAGCAGTGGCACTGCTG...CCAAAGTAGTGTAGAGTCTAGCCCATTGTTCAGCCTGCTTTCTTCTTCCCCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS-3UTR CCA 90 bp | GGGGAAGAAGAAAGCAGGCTGAACAATGGGCTAGACTCTACACTACTTTGGGCCAGGTGGGGTAGATCCTaGCCGAGGTCTTGCTCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: GEEESRLNNGLDSTLLWARWGRS*PRSCSG Trigger: ACCGGAGCAAGACCTCGGCCAGGATCTACCCCACCT...GGCCCAAAGTAGTGTAGAGTCTAGCCCATTGTTCAGCCTGCTTTCTTCTTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS-3UTR CCA 90 bp | GCAGGGGAAGAAGAAAGCAGGCTGAACAATGGGCTAGACTCTACACTACTTTGGGTCCGGGCCACAGCTTaGTGGCTGCTGAAACCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: AGEEESRLNNGLDSTLLWVRATA*WLLKPG Trigger: CCCTGGTTTCAGCAGCCACCAAGCTGTGGCCCGGAC...CCAAAGTAGTGTAGAGTCTAGCCCATTGTTCAGCCTGCTTTCTTCTTCCCCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS-3UTR CCA 90 bp | TACTCCTGGCCTCAGGAAAGACTGGAACATACAGGTGTGAGAGGTGCAAGAAAACTACAGAGGCCGTGTTaGGCGCCCAGAGCACGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: YSWPQERLEHTGVRGARKLQRPC*APRARG Trigger: GCCACGTGCTCTGGGCGCCCAACACGGCCTCTGTAG...TTTTCTTGCACCTCTCACACCTGTATGTTCCAGTCTTTCCTGAGGCCAGGAGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS-3UTR GCA 90 bp | AGACTGGAACATACAGGTGTGAGAGGTGCAAGAAAAAGCCCAAGGGACAGGGCTGCTGTTAGGCTGCTCTaGGTTGGGGAAGGAGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RLEHTGVRGARKSPRDRAAVRLL*VGEGEQ Trigger: CTGCTCTCCTTCCCCAACGCAGAGCAGCCTAACAGC...AGCCCTGTCCCTTGGGCTTTTTCTTGCACCTCTCACACCTGTATGTTCCAGTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS-3UTR GCA 90 bp | AGACTGGAACATACAGGTGTGAGAGGTGCAAGAAAAAGCCCAAGGGACAGGGCTAGGAGGTGTTCCCTGTaGCCGGAGGGTAGCATTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RLEHTGVRGARKSPRDRARRCSL*PEGSIG Trigger: TCCAATGCTACCCTCCGGGCACAGGGAACACCTCCT...AGCCCTGTCCCTTGGGCTTTTTCTTGCACCTCTCACACCTGTATGTTCCAGTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS-3UTR CCA 90 bp | TTGCTGATCTACCTACTCCTGGCCTCAGGAAAGACTGGAACATACAGGTGTGAGGCCAGGTCCAGGTCCTaGGAGTCTGAAGTGCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LLIYLLLASGKTGTYRCEARSRS*ESEVLE Trigger: CTCCAGCACTTCAGACTCCCAGGACCTGGACCTGGC...CTCACACCTGTATGTTCCAGTCTTTCCTGAGGCCAGGAGTAGGTAGATCAGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS-3UTR CCA 90 bp | TACTCCTGGCCTCAGGAAAGACTGGAACATACAGGTGTGAGAGGTGCAAGAAAACTTCGTCCCGAGGGCTaGTGGCCACGTGTGGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: YSWPQERLEHTGVRGARKLRPEG*WPRVVP Trigger: AGGAACCACACGTGGCCACCAGCCCTCGGGACGAAG...TTTTCTTGCACCTCTCACACCTGTATGTTCCAGTCTTTCCTGAGGCCAGGAGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS-3UTR CCA 90 bp | GCAGGGGAAGAAGAAAGCAGGCTGAACAATGGGCTAGACTCTACACTACTTTGGGACAAGGAGGCCCTTTaGAGTCCCAGGGGGAGCGTA | + |
|
Preference number: 4 (lower is better) Translates to: AGEEESRLNNGLDSTLLWDKEAL*SPRGSV Trigger: TACGCTCCCCCTGGGACTCCAAAGGGCCTCCTTGTC...CCAAAGTAGTGTAGAGTCTAGCCCATTGTTCAGCCTGCTTTCTTCTTCCCCTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS-3UTR CCA 90 bp | GGAAAGACTGGAACATACAGGTGTGAGAGGTGCAAGAAAAAGCCCAAGGGACAGAGAAGAGGGGTGGGCTaGAAGGTAGGGGGTCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GKTGTYRCERCKKKPKGQRRGVG*KVGGQR Trigger: CCTCTGACCCCCTACCTTCCAGCCCACCCCTCTTCT...CTGTCCCTTGGGCTTTTTCTTGCACCTCTCACACCTGTATGTTCCAGTCTTTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS-3UTR CCA 90 bp | AGACTGGAACATACAGGTGTGAGAGGTGCAAGAAAAAGCCCAAGGGACAGGGCTATGCTGTGTGGTAGGTaGGGTAGATCCTGGCCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RLEHTGVRGARKSPRDRAMLCGR*GRSWPR Trigger: CCTCGGCCAGGATCTACCCCACCTACCACACAGCAT...AGCCCTGTCCCTTGGGCTTTTTCTTGCACCTCTCACACCTGTATGTTCCAGTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS-3UTR CCA 90 bp | TACTCCTGGCCTCAGGAAAGACTGGAACATACAGGTGTGAGAGGTGCAAGAAAACGGGCCACAGCTTGGTaGCTGCTGAAACCAGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: YSWPQERLEHTGVRGARKRATAW*LLKPGS Trigger: GGACCCTGGTTTCAGCAGCCACCAAGCTGTGGCCCG...TTTTCTTGCACCTCTCACACCTGTATGTTCCAGTCTTTCCTGAGGCCAGGAGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS-3UTR CCA 90 bp | ACTGGAACATACAGGTGTGAGAGGTGCAAGAAAAAGCCCAAGGGACAGGGCTGGAGCGTTGGCCAGACCTaGGAATGTGTCTACAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TGTYRCERCKKKPKGQGWSVGQT*ECVYRG Trigger: GCCTCTGTAGACACATTCCCAGGTCTGGCCAACGCT...CCAGCCCTGTCCCTTGGGCTTTTTCTTGCACCTCTCACACCTGTATGTTCCAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS-3UTR TCA 90 bp | AGTGCAGGGGAAGAAGAAAGCAGGCTGAACAATGGGCTAGACTCTACACTACTTCAAAGTGCCCAAGGATaGTCCCCAGCCCCAAGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: SAGEEESRLNNGLDSTLLQSAQG*SPAPRA Trigger: CGCTCTTGGGGCTGGGGATCATCCTTGGGCACTTTG...AAGTAGTGTAGAGTCTAGCCCATTGTTCAGCCTGCTTTCTTCTTCCCCTGCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS-3UTR TCA 90 bp | AGTGCAGGGGAAGAAGAAAGCAGGCTGAACAATGGGCTAGACTCTACACTACTTCAGGTCCTGGGAGTCTaGAGTGCTGGAGGTCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SAGEEESRLNNGLDSTLLQVLGV*SAGGQR Trigger: CCTCTGACCTCCAGCACTTCAGACTCCCAGGACCTG...AAGTAGTGTAGAGTCTAGCCCATTGTTCAGCCTGCTTTCTTCTTCCCCTGCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS-3UTR GCA 90 bp | GGAAAGACTGGAACATACAGGTGTGAGAGGTGCAAGAAAAAGCCCAAGGGACAGGCCACTGGAGCCTGGTaGACTGATCTCTTTGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GKTGTYRCERCKKKPKGQATGAW*TDLFGG Trigger: GCCACCAAAGAGATCAGTGCACCAGGCTCCAGTGGC...CTGTCCCTTGGGCTTTTTCTTGCACCTCTCACACCTGTATGTTCCAGTCTTTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS-3UTR CCA 90 bp | GGGGAAGAAGAAAGCAGGCTGAACAATGGGCTAGACTCTACACTACTTTGGGCCGTAGTGCCTCTCCTCTaGGAAAGCCCTTGGGTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GEEESRLNNGLDSTLLWAVVPLL*ESPWVQ Trigger: CTGAACCCAAGGGCTTTCCCAGAGGAGAGGCACTAC...GGCCCAAAGTAGTGTAGAGTCTAGCCCATTGTTCAGCCTGCTTTCTTCTTCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS-3UTR TCA 90 bp | GGGGAAGAAGAAAGCAGGCTGAACAATGGGCTAGACTCTACACTACTTTGGGCCAATCGGGGGAAATCCTaGGGTGTTGTGAGGATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GEEESRLNNGLDSTLLWANRGKS*GVVRIQ Trigger: CTGGATCCTCACAACACCTCAGGATTTCCCCCGATT...GGCCCAAAGTAGTGTAGAGTCTAGCCCATTGTTCAGCCTGCTTTCTTCTTCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS-3UTR TCA 90 bp | GGGGAAGAAGAAAGCAGGCTGAACAATGGGCTAGACTCTACACTACTTTGGGCCAGTTGTCATAGATACTaGGGCCACTGGAGCCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GEEESRLNNGLDSTLLWASCHRY*GHWSLV Trigger: CACCAGGCTCCAGTGGCCTCAGTATCTATGACAACT...GGCCCAAAGTAGTGTAGAGTCTAGCCCATTGTTCAGCCTGCTTTCTTCTTCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS-3UTR TCA 90 bp | GGAAGAAGAAAGCAGGCTGAACAATGGGCTAGACTCTACACTACTTTGGGCCCCGCATCAGCTGGTCATTaGCCATTCGTACCTGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GRRKQAEQWARLYTTLGPASAGH*PFVPAE Trigger: CTCTGCAGGTACGAATGGTCAATGACCAGCTGATGC...GGGGCCCAAAGTAGTGTAGAGTCTAGCCCATTGTTCAGCCTGCTTTCTTCTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS-3UTR GCA 90 bp | GCCTCAGGAAAGACTGGAACATACAGGTGTGAGAGGTGCAAGAAAAAGCCCAAGTTGGGGATGGCAAAGTaGCCAAGGATGATCCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ASGKTGTYRCERCKKKPKLGMAK*PRMIPS Trigger: GCTGGGGATCATCCTTGGGCACTTTGCCATCCCCAA...CTTGGGCTTTTTCTTGCACCTCTCACACCTGTATGTTCCAGTCTTTCCTGAGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS-3UTR GCA 90 bp | GGAAGAAGAAAGCAGGCTGAACAATGGGCTAGACTCTACACTACTTTGGGCCCCCAGGAAGTGAACGAATaGGGCATAGTCACTGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GRRKQAEQWARLYTTLGPQEVNE*GIVTAS Trigger: GCTGGCAGTGACTATGCCGCATTCGTTCACTTCCTG...GGGGCCCAAAGTAGTGTAGAGTCTAGCCCATTGTTCAGCCTGCTTTCTTCTTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS-3UTR GCA 90 bp | AGACTGGAACATACAGGTGTGAGAGGTGCAAGAAAAAGCCCAAGGGACAGGGCTTTGACCATTCGTACCTaGAGAGGATCAGGGCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RLEHTGVRGARKSPRDRALTIRT*RGSGLL Trigger: GAGCAGCCCTGATCCTCTGCAGGTACGAATGGTCAA...AGCCCTGTCCCTTGGGCTTTTTCTTGCACCTCTCACACCTGTATGTTCCAGTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS-3UTR CCA 90 bp | GGAAAGACTGGAACATACAGGTGTGAGAGGTGCAAGAAAAAGCCCAAGGGACAGCTCTGGGAAAGCCCTTaGGTTCAGGAATGCCCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GKTGTYRCERCKKKPKGQLWESP*VQECPF Trigger: GAACGGGCATTCCTGAACCCAAGGGCTTTCCCAGAG...CTGTCCCTTGGGCTTTTTCTTGCACCTCTCACACCTGTATGTTCCAGTCTTTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS-3UTR TCA 90 bp | AGTGCAGGGGAAGAAGAAAGCAGGCTGAACAATGGGCTAGACTCTACACTACTTCAGAGATGTCCACATTaGTGTAGGCCACCGTGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: SAGEEESRLNNGLDSTLLQRCPH*CRPPCA Trigger: AGCGCACGGTGGCCTACATCAATGTGGACATCTCTG...AAGTAGTGTAGAGTCTAGCCCATTGTTCAGCCTGCTTTCTTCTTCCCCTGCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS-3UTR TCA 90 bp | TACTCCTGGCCTCAGGAAAGACTGGAACATACAGGTGTGAGAGGTGCAAGAAAATGGAGCCTGGTGCACTaGTCTCTTTGGTGGCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: YSWPQERLEHTGVRGARKWSLVH*SLWWQR Trigger: TCTCTGCCACCAAAGAGATCAGTGCACCAGGCTCCA...TTTTCTTGCACCTCTCACACCTGTATGTTCCAGTCTTTCCTGAGGCCAGGAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS-3UTR TCA 90 bp | AGTGCAGGGGAAGAAGAAAGCAGGCTGAACAATGGGCTAGACTCTACACTACTTCAGCTTGGTGGCTGCTaGAACCAGGGTCCAGAAACT | + |
|
Preference number: 4 (lower is better) Translates to: SAGEEESRLNNGLDSTLLQLGGC*NQGPET Trigger: AGTTTCTGGACCCTGGTTTCAGCAGCCACCAAGCTG...AAGTAGTGTAGAGTCTAGCCCATTGTTCAGCCTGCTTTCTTCTTCCCCTGCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS-3UTR TCA 90 bp | AGACTGGAACATACAGGTGTGAGAGGTGCAAGAAAAAGCCCAAGGGACAGGGCTCCAAAGGCCCCAGGCTaGTGTTCTGTTTCTCTAACT | + |
|
Preference number: 4 (lower is better) Translates to: RLEHTGVRGARKSPRDRAPKAPG*CSVSLT Trigger: AGTTAGAGAAACAGAACATCAGCCTGGGGCCTTTGG...AGCCCTGTCCCTTGGGCTTTTTCTTGCACCTCTCACACCTGTATGTTCCAGTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS-3UTR GCA 90 bp | GAAGAAGAAAGCAGGCTGAACAATGGGCTAGACTCTACACTACTTTGGGCCCCAGTTTCTCTAACTGGGTaGCAAGGGCCTCTTGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: EEESRLNNGLDSTLLWAPVSLTG*QGPLEQ Trigger: CTGCTCAAGAGGCCCTTGGCACCCAGTTAGAGAAAC...TGGGGCCCAAAGTAGTGTAGAGTCTAGCCCATTGTTCAGCCTGCTTTCTTCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS-3UTR CCA 90 bp | GGAAGAAGAAAGCAGGCTGAACAATGGGCTAGACTCTACACTACTTTGGGCCCCTATACTCATAGGTCTTaGCTGAGTCCAGCCCAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: GRRKQAEQWARLYTTLGPYTHRS*LSPAQS Trigger: CGACTGGGCTGGACTCAGCCAAGACCTATGAGTATA...GGGGCCCAAAGTAGTGTAGAGTCTAGCCCATTGTTCAGCCTGCTTTCTTCTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS-3UTR TCA 90 bp | AGTGCAGGGGAAGAAGAAAGCAGGCTGAACAATGGGCTAGACTCTACACTACTTTGGTGCCCTCGAGGTTaGTTCCCTGAGTCTCTAACT | + |
|
Preference number: 4 (lower is better) Translates to: SAGEEESRLNNGLDSTLLWCPRG*FPESLT Trigger: AGTTAGAGACTCAGGGAATCAACCTCGAGGGCACCA...AAGTAGTGTAGAGTCTAGCCCATTGTTCAGCCTGCTTTCTTCTTCCCCTGCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS-3UTR CCA 90 bp | TTGCTGATCTACCTACTCCTGGCCTCAGGAAAGACTGGAACATACAGGTGTGAGAAGGGTTGGAAGGAGTaGAAGGTTGTTCCATTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LLIYLLLASGKTGTYRCEKGWKE*KVVPLG Trigger: CCCCAATGGAACAACCTTCCACTCCTTCCAACCCTT...CTCACACCTGTATGTTCCAGTCTTTCCTGAGGCCAGGAGTAGGTAGATCAGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS-3UTR GCA 90 bp | GAAGAAGAAAGCAGGCTGAACAATGGGCTAGACTCTACACTACTTTGGGCCCCAACAGAGCAGATCTCTTaGATCCTCAAAGCCGATAGG | + |
|
Preference number: 4 (lower is better) Translates to: EEESRLNNGLDSTLLWAPTEQIS*ILKADR Trigger: CCTATCGGCTTTGAGGATGCAAGAGATCTGCTCTGT...TGGGGCCCAAAGTAGTGTAGAGTCTAGCCCATTGTTCAGCCTGCTTTCTTCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS-3UTR CCA 90 bp | AGTGCAGGGGAAGAAGAAAGCAGGCTGAACAATGGGCTAGACTCTACACTACTTCCACGTGTGGTTCCTTaGAGAGTTCTCGAAGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SAGEEESRLNNGLDSTLLPRVVP*RVLEGS Trigger: AGAACCTTCGAGAACTCTCCAAGGAACCACACGTGG...AAGTAGTGTAGAGTCTAGCCCATTGTTCAGCCTGCTTTCTTCTTCCCCTGCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS-3UTR CCA 90 bp | TACTCCTGGCCTCAGGAAAGACTGGAACATACAGGTGTGAGAGGTGCAAGAAAACTTCTGAACCTTGGTTaGCATAGACAAGGAGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: YSWPQERLEHTGVRGARKLLNLG*HRQGGP Trigger: AGGGCCTCCTTGTCTATGCCAACCAAGGTTCAGAAG...TTTTCTTGCACCTCTCACACCTGTATGTTCCAGTCTTTCCTGAGGCCAGGAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS-3UTR CCA 90 bp | TACTCCTGGCCTCAGGAAAGACTGGAACATACAGGTGTGAGAGGTGCAAGAAAACAGCCGCCAGGAGTTTaGGAAGGTTTCATTAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: YSWPQERLEHTGVRGARKQPPGV*EGFIRQ Trigger: TTGCCTAATGAAACCTTCCCAAACTCCTGGCGGCTG...TTTTCTTGCACCTCTCACACCTGTATGTTCCAGTCTTTCCTGAGGCCAGGAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS-3UTR CCA 90 bp | TGTTTGCTGATCTACCTACTCCTGGCCTCAGGAAAGACTGGAACATACAGGTGTAGCTCCAGCCTGTTGTaGACACTCACTTTCACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: CLLIYLLLASGKTGTYRCSSSLL*TLTFTS Trigger: TGAGGTGAAAGTGAGTGTCCACAACAGGCTGGAGCT...ACACCTGTATGTTCCAGTCTTTCCTGAGGCCAGGAGTAGGTAGATCAGCAAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS-3UTR CCA 90 bp | TTGCTGATCTACCTACTCCTGGCCTCAGGAAAGACTGGAACATACAGGTGTGAGTTCTTCTCGAAGGGTTaGAAGGAGTGGAAGGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LLIYLLLASGKTGTYRCEFFSKG*KEWKVV Trigger: AACAACCTTCCACTCCTTCCAACCCTTCGAGAAGAA...CTCACACCTGTATGTTCCAGTCTTTCCTGAGGCCAGGAGTAGGTAGATCAGCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS-3UTR GCA 90 bp | GGGGAAGAAGAAAGCAGGCTGAACAATGGGCTAGACTCTACACTACTTTGGGCCATCAAATGTATCAAATaGTGTGTGGTAGGTGGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: GEEESRLNNGLDSTLLWAIKCIK*CVVGGV Trigger: TACCCCACCTACCACACAGCATTTGATACATTTGAT...GGCCCAAAGTAGTGTAGAGTCTAGCCCATTGTTCAGCCTGCTTTCTTCTTCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS CCA 90 bp | TCCCCAGGACTCGAGAGATCTCCAAGAGGACAGCAGTGCCACTGCTaGGGTCCACCGCCCCATGTACCCAGCTGTCCCGGTGGTTTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: SPGLERSPRGQQCHC*GPPPHVPSCPGGFR Trigger: ACGGAAACCACCGGGACAGCTGGGTACATGGGGCGGTGGACCCCAGCAGTGGCACTGCTGTCCTCTTGGAGATCTCTCGAGTCCTGGGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS CCA 90 bp | GCACCAGGGCTTCGTCCCGAGGGCTGGTGGCCACGTGTGGTTCCTTaGAGAGTTCTCGAAGGTTCTCTCGGATCCTGCTGGCATCTAGTT | + |
|
Preference number: 5 (lower is better) Translates to: APGLRPEGWWPRVVP*RVLEGSLGSCWHLV Trigger: AACTAGATGCCAGCAGGATCCGAGAGAACCTTCGAGAACTCTCCAAGGAACCACACGTGGCCACCAGCCCTCGGGACGAAGCCCTGGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS CCA 90 bp | GCTCTGCGTTGGGGAAGGAGAGCAGGACCCTATACTCATAGGTCTTaGCTGAGTCCAGCCCAGTCGCTGTATCCTTCCAGCGCCCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: ALRWGRRAGPYTHRS*LSPAQSLYPSSAPA Trigger: TGCTGGGGCGCTGGAAGGATACAGCGACTGGGCTGGACTCAGCCAAGACCTATGAGTATAGGGTCCTGCTCTCCTTCCCCAACGCAGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS CCA 90 bp | CCCGCCTGCTCCCCGGTCAGATTCTTCTCGAAGGGTTGGAAGGAGTaGAAGGTTGTTCCATTGGGGCCCACGACTTCCACGCTGTTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: PACSPVRFFSKGWKE*KVVPLGPTTSTLLG Trigger: GCCTAACAGCGTGGAAGTCGTGGGCCCCAATGGAACAACCTTCCACTCCTTCCAACCCTTCGAGAAGAATCTGACCGGGGAGCAGGCGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS CCA 90 bp | CATAAGCGTTGGCCAGACCTGGGAATGTGTCTACAGAGGCCGTGTTaGGCGCCCAGAGCACGTGGCTGTAGTGCCTCTCCTCTGGGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: HKRWPDLGMCLQRPC*APRARGCSASPLGK Trigger: CTTTCCCAGAGGAGAGGCACTACAGCCACGTGCTCTGGGCGCCCAACACGGCCTCTGTAGACACATTCCCAGGTCTGGCCAACGCTTATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS CCA 90 bp | TCCGGAGTTGATTTCCTGGGCCTTGGCATAAGCGTTGGCCAGACCTaGGAATGTGTCTACAGAGGCCGTGTTGGGCGCCCAGAGCACGTG | + |
|
Preference number: 5 (lower is better) Translates to: SGVDFLGLGISVGQT*ECVYRGRVGRPEHV Trigger: CACGTGCTCTGGGCGCCCAACACGGCCTCTGTAGACACATTCCCAGGTCTGGCCAACGCTTATGCCAAGGCCCAGGAAATCAACTCCGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS TCA 90 bp | TGCATCCTCAAAGCCGATAGGCTGGGTGGGAATCGGGGGAAATCCTaGGGTGTTGTGAGGATCCAGGCGGAAAGAAGAGGGGTGGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: CILKADRLGGNRGKS*GVVRIQAERRGVGW Trigger: CCAGCCCACCCCTCTTCTTTCCGCCTGGATCCTCACAACACCTCAGGATTTCCCCCGATTCCCACCCAGCCTATCGGCTTTGAGGATGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS TCA 90 bp | CCGAGGTCTTGCTCCGGTCATAGGTGTAGGCAAGGTCCATGGACGTaGTGCCCAGGAAGTGAACGAATGCGGCATAGTCACTGCCAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: PRSCSGHRCRQGPWT*CPGSERMRHSHCQR Trigger: GCGCTGGCAGTGACTATGCCGCATTCGTTCACTTCCTGGGCATCACGTCCATGGACCTTGCCTACACCTATGACCGGAGCAAGACCTCGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS GCA 90 bp | GGTTGTTCCATTGGGGCCCACGACTTCCACGCTGTTAGGCTGCTCTaGGTTGGGGAAGGAGAGCAGGACCCTATACTCATAGGTCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: GCSIGAHDFHAVRLL*VGEGEQDPILIGLG Trigger: GCCAAGACCTATGAGTATAGGGTCCTGCTCTCCTTCCCCAACGCAGAGCAGCCTAACAGCGTGGAAGTCGTGGGCCCCAATGGAACAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS GCA 90 bp | GCTGCTCTTCTGCAGGGTCAAGATGTGCTCACCCAAGGATGCAGCTaGAGCCTTAAAGTTCGCCACTGCAGTCACCAAAGGCCCCAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: AALLQGQDVLTQGCS*SLKVRHCSHQRPQA Trigger: AGCCTGGGGCCTTTGGTGACTGCAGTGGCGAACTTTAAGGCTGCAGCTGCATCCTTGGGTGAGCACATCTTGACCCTGCAGAAGAGCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS-3UTR CAA 90 bp | GGGGAAGAAGAAAGCAGGCTGAACAATGGGCTAGACTCTACACTACTTTGGGCCAAGCCGGGTCCCAGCTaGTACTCACAGCCCAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GEEESRLNNGLDSTLLWAKPGPS*YSQPRA Trigger: GGCCCTGGGCTGTGAGTACAAGCTGGGACCCGGCTT...GGCCCAAAGTAGTGTAGAGTCTAGCCCATTGTTCAGCCTGCTTTCTTCTTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS TCA 90 bp | GGTTTCCGTAGATCACGTATCGATCAGGCTCCACAGCCCCCTGGATaGTGCCCAGGACATTGGAAGAGGTCCTCAGCTCCAGCCTGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: GFRRSRIDQAPQPPG*CPGHWKRSSAPACC Trigger: ACAACAGGCTGGAGCTGAGGACCTCTTCCAATGTCCTGGGCATCATCCAGGGGGCTGTGGAGCCTGATCGATACGTGATCTACGGAAACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS GCA 90 bp | AGGGTGGCTGCCGCACCCTCCAGGGCCGTTACTACAATGCTAAGCTaGCTCTGTACTTCAGCCCAAGCTTCAGATCCGGAGTTGATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RVAAAPSRAVTTMLS*LCTSAQASDPELIS Trigger: GGAAATCAACTCCGGATCTGAAGCTTGGGCTGAAGTACAGAGGCAGCTTAGCATTGTAGTAACGGCCCTGGAGGGTGCGGCAGCCACCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS-3UTR CAA 90 bp | GGGGAAGAAGAAAGCAGGCTGAACAATGGGCTAGACTCTACACTACTTTGGGCCAGACAAGGAGGCCCTTaGGAGTCCCAGGGGGAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: GEEESRLNNGLDSTLLWARQGGP*ESQGER Trigger: ACGCTCCCCCTGGGACTCCAAAGGGCCTCCTTGTCT...GGCCCAAAGTAGTGTAGAGTCTAGCCCATTGTTCAGCCTGCTTTCTTCTTCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS TCA 90 bp | CCCTTGGGTTCAGGAATGCCCGTTCTAAGAGCATCAGCTGGTCATTaGCCATTCGTACCTGCAGAGGATCAGGGCTGCTCTTCTGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: PLGSGMPVLRASAGH*PFVPAEDQGCSSAG Trigger: CCCTGCAGAAGAGCAGCCCTGATCCTCTGCAGGTACGAATGGTCAATGACCAGCTGATGCTCTTAGAACGGGCATTCCTGAACCCAAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS CCA 90 bp | TCTAGTTGTCCCATTACGGAGTCAAGGATCGCCAGGTCCAGGTCCTaGGAGTCTGAAGTGCTGGAGGTCAGAGGACTAGTTGCTTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SSCPITESRIARSRS*ESEVLEVRGLVALG Trigger: CCCCAAAGCAACTAGTCCTCTGACCTCCAGCACTTCAGACTCCCAGGACCTGGACCTGGCGATCCTTGACTCCGTAATGGGACAACTAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS CCA 90 bp | ATGATGCCCAGGACATTGGAAGAGGTCCTCAGCTCCAGCCTGTTGTaGACACTCACTTTCACCTCACTCCCAGCAGGGAAGCTTCCATTC | + |
|
Preference number: 5 (lower is better) Translates to: MMPRTLEEVLSSSLL*TLTFTSLPAGKLPF Trigger: GAATGGAAGCTTCCCTGCTGGGAGTGAGGTGAAAGTGAGTGTCCACAACAGGCTGGAGCTGAGGACCTCTTCCAATGTCCTGGGCATCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS-3UTR CAA 90 bp | ACTGGAACATACAGGTGTGAGAGGTGCAAGAAAAAGCCCAAGGGACAGGGCTGGGTAGGCAGCATAAGGTaGCAATACATTGGGCCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: TGTYRCERCKKKPKGQGWVGSIR*QYIGPR Trigger: GCGGGGCCCAATGTATTGCAACCTTATGCTGCCTAC...CCAGCCCTGTCCCTTGGGCTTTTTCTTGCACCTCTCACACCTGTATGTTCCAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS-3UTR CAA 90 bp | AGTGCAGGGGAAGAAGAAAGCAGGCTGAACAATGGGCTAGACTCTACACTACTTAGTCCGGGCCACAGCTaGGTGGCTGCTGAAACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SAGEEESRLNNGLDSTLLSPGHS*VAAETR Trigger: CCTGGTTTCAGCAGCCACCAAGCTGTGGCCCGGACT...AAGTAGTGTAGAGTCTAGCCCATTGTTCAGCCTGCTTTCTTCTTCCCCTGCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS-3UTR CAA 90 bp | GGAAAGACTGGAACATACAGGTGTGAGAGGTGCAAGAAAAAGCCCAAGGGACAGGGTGCCAAGGGCCTCTaGAGCAGCCTGCAGGAAACT | + |
|
Preference number: 5 (lower is better) Translates to: GKTGTYRCERCKKKPKGQGAKGL*SSLQET Trigger: AGTTTCCTGCAGGCTGCTCAAGAGGCCCTTGGCACC...CTGTCCCTTGGGCTTTTTCTTGCACCTCTCACACCTGTATGTTCCAGTCTTTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS-3UTR CAA 90 bp | AGACTGGAACATACAGGTGTGAGAGGTGCAAGAAAAAGCCCAAGGGACAGGGCTGCCACGTGTGGTTCCTaGGAGAGTTCTCGAAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: RLEHTGVRGARKSPRDRAATCGS*ESSRRF Trigger: GAACCTTCGAGAACTCTCCAAGGAACCACACGTGGC...AGCCCTGTCCCTTGGGCTTTTTCTTGCACCTCTCACACCTGTATGTTCCAGTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS-3UTR CAA 90 bp | GGAAGAAGAAAGCAGGCTGAACAATGGGCTAGACTCTACACTACTTTGGGCCCCAGAGGACTAGTTGCTTaGGGGATGGCAAAGTGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: GRRKQAEQWARLYTTLGPRGLVA*GMAKCP Trigger: TGGGCACTTTGCCATCCCCAAAGCAACTAGTCCTCT...GGGGCCCAAAGTAGTGTAGAGTCTAGCCCATTGTTCAGCCTGCTTTCTTCTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS-3UTR CAA 90 bp | ACTGGAACATACAGGTGTGAGAGGTGCAAGAAAAAGCCCAAGGGACAGGGCTGGCCGACAACTCCATGTTaGGCAGCATTAATGGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: TGTYRCERCKKKPKGQGWPTTPC*AALMAL Trigger: CAAGGCCATTAATGCTGCCAAACATGGAGTTGTCGG...CCAGCCCTGTCCCTTGGGCTTTTTCTTGCACCTCTCACACCTGTATGTTCCAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS-3UTR CAA 90 bp | TTGCTGATCTACCTACTCCTGGCCTCAGGAAAGACTGGAACATACAGGTGTGAGCTCAGCTCCAGCCTGTaGTGGACACTCACTTTCACC | + |
|
Preference number: 5 (lower is better) Translates to: LLIYLLLASGKTGTYRCELSSSL*WTLTFT Trigger: GGTGAAAGTGAGTGTCCACAACAGGCTGGAGCTGAG...CTCACACCTGTATGTTCCAGTCTTTCCTGAGGCCAGGAGTAGGTAGATCAGCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS-3UTR CAA 90 bp | GAAGAAGAAAGCAGGCTGAACAATGGGCTAGACTCTACACTACTTTGGGCCCCAGTGCGCTCCTGCAGCTaGCTGAGAAACTCCTCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: EEESRLNNGLDSTLLWAPVRSCS*LRNSSV Trigger: TACAGAGGAGTTTCTCAGCAAGCTGCAGGAGCGCAC...TGGGGCCCAAAGTAGTGTAGAGTCTAGCCCATTGTTCAGCCTGCTTTCTTCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS-3UTR CAA 90 bp | GCAGGGGAAGAAGAAAGCAGGCTGAACAATGGGCTAGACTCTACACTACTTTGGGCCCGGAGGGTAGCATaGGAGAAAACAGAGATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: AGEEESRLNNGLDSTLLWARRVA*EKTEMS Trigger: GGACATCTCTGTTTTCTCCAATGCTACCCTCCGGGC...CCAAAGTAGTGTAGAGTCTAGCCCATTGTTCAGCCTGCTTTCTTCTTCCCCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS-3UTR CAA 90 bp | TACTCCTGGCCTCAGGAAAGACTGGAACATACAGGTGTGAGAGGTGCAAGAAAACCTCTGGGAAAGCCCTaGGGTTCAGGAATGCCCGTT | + |
|
Preference number: 5 (lower is better) Translates to: YSWPQERLEHTGVRGARKPLGKP*GSGMPV Trigger: AACGGGCATTCCTGAACCCAAGGGCTTTCCCAGAGG...TTTTCTTGCACCTCTCACACCTGTATGTTCCAGTCTTTCCTGAGGCCAGGAGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS GCA 90 bp | GAAACCAGGGTCCAGAAACTTCTCCACATAATCAAATGTATCAAATaGTGTGTGGTAGGTGGGGTAGATCCTGGCCGAGGTCTTGCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: ETRVQKLLHIIKCIK*CVVGGVDPGRGLAP Trigger: CGGAGCAAGACCTCGGCCAGGATCTACCCCACCTACCACACAGCATTTGATACATTTGATTATGTGGAGAAGTTTCTGGACCCTGGTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS GCA 90 bp | ATATCGGATCCAGTTGTCATAGATACTGAGGCCACTGGAGCCTGGTaGACTGATCTCTTTGGTGGCAGAGAAGATCACACTTTGTACAGG | + |
|
Preference number: 5 (lower is better) Translates to: ISDPVVIDTEATGAW*TDLFGGREDHTLYR Trigger: CCTGTACAAAGTGTGATCTTCTCTGCCACCAAAGAGATCAGTGCACCAGGCTCCAGTGGCCTCAGTATCTATGACAACTGGATCCGATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS CCA 90 bp | GGTATATCGGATCCAGTTGTCATAGATACTGAGGCCACTGGAGCCTaGTGCACTGATCTCTTTGGTGGCAGAGAAGATCACACTTTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: GISDPVVIDTEATGA*CTDLFGGREDHTLY Trigger: GTACAAAGTGTGATCTTCTCTGCCACCAAAGAGATCAGTGCACCAGGCTCCAGTGGCCTCAGTATCTATGACAACTGGATCCGATATACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS CCA 90 bp | GAAACTTCTCCACATAATCAAATGTATCAAATGCTGTGTGGTAGGTaGGGTAGATCCTGGCCGAGGTCTTGCTCCGGTCATAGGTGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: ETSPHNQMYQMLCGR*GRSWPRSCSGHRCR Trigger: CCTACACCTATGACCGGAGCAAGACCTCGGCCAGGATCTACCCCACCTACCACACAGCATTTGATACATTTGATTATGTGGAGAAGTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS-3UTR CAA 90 bp | GGAAAGACTGGAACATACAGGTGTGAGAGGTGCAAGAAAAAGCCCAAGGGACAGATTCTTCTCGAAGGGTaGGAAGGAGTGGAAGGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: GKTGTYRCERCKKKPKGQILLEG*EGVEGC Trigger: ACAACCTTCCACTCCTTCCAACCCTTCGAGAAGAAT...CTGTCCCTTGGGCTTTTTCTTGCACCTCTCACACCTGTATGTTCCAGTCTTTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS GCA 72 bp | CCAGTCGCTGTATCCTTCCAGCGCCCCAGCAGCAGCTaGACCAGGGCTTCGTCCCGAGGGCTGGTGGCCACG | + |
|
Preference number: 6 (lower is better) Translates to: PVAVSFQRPSSS*TRASSRGLVAT Trigger: CGTGGCCACCAGCCCTCGGGACGAAGCCCTGGTGCAGCTGCTGCTGGGGCGCTGGAAGGATACAGCGACTGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS CAA 90 bp | CTCCCAGCAGGGAAGCTTCCATTCGGCTCAAAGCCGGGTCCCAGCTaGTACTCACAGCCCAGGGCCCCCTGCCAGAAGGCAGGGGCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: LPAGKLPFGSKPGPS*YSQPRAPCQKAGAE Trigger: CTCTGCCCCTGCCTTCTGGCAGGGGGCCCTGGGCTGTGAGTACAAGCTGGGACCCGGCTTTGAGCCGAATGGAAGCTTCCCTGCTGGGAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS CCA 72 bp | CCAGCAGCAGCTGCACCAGGGCTTCGTCCCGAGGGCTaGTGGCCACGTGTGGTTCCTTGGAGAGTTCTCGAA | + |
|
Preference number: 6 (lower is better) Translates to: PAAAAPGLRPEG*WPRVVPWRVLE Trigger: TTCGAGAACTCTCCAAGGAACCACACGTGGCCACCAGCCCTCGGGACGAAGCCCTGGTGCAGCTGCTGCTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS CCA 72 bp | CTCGAGAGATCTCCAAGAGGACAGCAGTGCCACTGCTaGGGTCCACCGCCCCATGTACCCAGCTGTCCCGGT | + |
|
Preference number: 6 (lower is better) Translates to: LERSPRGQQCHC*GPPPHVPSCPG Trigger: ACCGGGACAGCTGGGTACATGGGGCGGTGGACCCCAGCAGTGGCACTGCTGTCCTCTTGGAGATCTCTCGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS TCA 72 bp | GGCTGGGTGGGAATCGGGGGAAATCCTGAGGTGTTGTaGGGATCCAGGCGGAAAGAAGAGGGGTGGGCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: GWVGIGGNPEVL*GSRRKEEGWAG Trigger: TCCAGCCCACCCCTCTTCTTTCCGCCTGGATCCTCACAACACCTCAGGATTTCCCCCGATTCCCACCCAGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS TCA 72 bp | GGGCCCCCTGCCAGAAGGCAGGGGCAGAGGTTCCGGTaGGGTTACAGAGCAGATCTCTTGCATCCTCAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: GPPARRQGQRFR*GYRADLLHPQS Trigger: GCTTTGAGGATGCAAGAGATCTGCTCTGTAACCTCACCGGAACCTCTGCCCCTGCCTTCTGGCAGGGGGCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS CCA 72 bp | CTTCGTCCCGAGGGCTGGTGGCCACGTGTGGTTCCTTaGAGAGTTCTCGAAGGTTCTCTCGGATCCTGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LRPEGWWPRVVP*RVLEGSLGSCW Trigger: CCAGCAGGATCCGAGAGAACCTTCGAGAACTCTCCAAGGAACCACACGTGGCCACCAGCCCTCGGGACGAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS CCA 72 bp | CACCAGGGCTTCGTCCCGAGGGCTGGTGGCCACGTGTaGTTCCTTGGAGAGTTCTCGAAGGTTCTCTCGGAT | + |
|
Preference number: 6 (lower is better) Translates to: HQGFVPRAGGHV*FLGEFSKVLSD Trigger: ATCCGAGAGAACCTTCGAGAACTCTCCAAGGAACCACACGTGGCCACCAGCCCTCGGGACGAAGCCCTGGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS CCA 72 bp | CCCGCCTGCTCCCCGGTCAGATTCTTCTCGAAGGGTTaGAAGGAGTGGAAGGTTGTTCCATTGGGGCCCACG | + |
|
Preference number: 6 (lower is better) Translates to: PACSPVRFFSKG*KEWKVVPLGPT Trigger: CGTGGGCCCCAATGGAACAACCTTCCACTCCTTCCAACCCTTCGAGAAGAATCTGACCGGGGAGCAGGCGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS CAA 72 bp | GCTTCGTCCCGAGGGCTGGTGGCCACGTGTGGTTCCTaGGAGAGTTCTCGAAGGTTCTCTCGGATCCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: ASSRGLVATCGS*ESSRRFSRILL Trigger: CAGCAGGATCCGAGAGAACCTTCGAGAACTCTCCAAGGAACCACACGTGGCCACCAGCCCTCGGGACGAAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS CAA 90 bp | TGCACCAGGGCTTCGTCCCGAGGGCTGGTGGCCACGTGTGGTTCCTaGGAGAGTTCTCGAAGGTTCTCTCGGATCCTGCTGGCATCTAGT | + |
|
Preference number: 6 (lower is better) Translates to: CTRASSRGLVATCGS*ESSRRFSRILLASS Trigger: ACTAGATGCCAGCAGGATCCGAGAGAACCTTCGAGAACTCTCCAAGGAACCACACGTGGCCACCAGCCCTCGGGACGAAGCCCTGGTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS GCA 72 bp | GTTCCATTGGGGCCCACGACTTCCACGCTGTTAGGCTaGTCTGCGTTGGGGAAGGAGAGCAGGACCCTATAC | + |
|
Preference number: 6 (lower is better) Translates to: VPLGPTTSTLLG*SALGKESRTLY Trigger: GTATAGGGTCCTGCTCTCCTTCCCCAACGCAGAGCAGCCTAACAGCGTGGAAGTCGTGGGCCCCAATGGAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS GCA 72 bp | AAGGTCCATGGACGTGATGCCCAGGAAGTGAACGAATaGGGCATAGTCACTGCCAGCGCCCAGTGTGCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: KVHGRDAQEVNE*GIVTASAQCAQ Trigger: CTGGGCACACTGGGCGCTGGCAGTGACTATGCCGCATTCGTTCACTTCCTGGGCATCACGTCCATGGACCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS CCA 72 bp | AGAAGCACGCTCCCAGCAGTCCGGGCCACAGCTTGGTaGCTGCTGAAACCAGGGTCCAGAAACTTCTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: RSTLPAVRATAW*LLKPGSRNFST Trigger: TGTGGAGAAGTTTCTGGACCCTGGTTTCAGCAGCCACCAAGCTGTGGCCCGGACTGCTGGGAGCGTGCTTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS CCA 72 bp | GATTTCCTGGGCCTTGGCATAAGCGTTGGCCAGACCTaGGAATGTGTCTACAGAGGCCGTGTTGGGCGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: DFLGLGISVGQT*ECVYRGRVGRP Trigger: TGGGCGCCCAACACGGCCTCTGTAGACACATTCCCAGGTCTGGCCAACGCTTATGCCAAGGCCCAGGAAATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS GCA 72 bp | GCCGCACCCTCCAGGGCCGTTACTACAATGCTAAGCTaGCTCTGTACTTCAGCCCAAGCTTCAGATCCGGAG | + |
|
Preference number: 6 (lower is better) Translates to: AAPSRAVTTMLS*LCTSAQASDPE Trigger: CTCCGGATCTGAAGCTTGGGCTGAAGTACAGAGGCAGCTTAGCATTGTAGTAACGGCCCTGGAGGGTGCGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS CAA 72 bp | CCCAGGACATTGGAAGAGGTCCTCAGCTCCAGCCTGTaGTGGACACTCACTTTCACCTCACTCCCAGCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: PRTLEEVLSSSL*WTLTFTSLPAG Trigger: CCCTGCTGGGAGTGAGGTGAAAGTGAGTGTCCACAACAGGCTGGAGCTGAGGACCTCTTCCAATGTCCTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS TCA 72 bp | AAAGCCGATAGGCTGGGTGGGAATCGGGGGAAATCCTaGGGTGTTGTGAGGATCCAGGCGGAAAGAAGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: KADRLGGNRGKS*GVVRIQAERRG Trigger: CCCTCTTCTTTCCGCCTGGATCCTCACAACACCTCAGGATTTCCCCCGATTCCCACCCAGCCTATCGGCTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS TCA 72 bp | AGATCACGTATCGATCAGGCTCCACAGCCCCCTGGATaGTGCCCAGGACATTGGAAGAGGTCCTCAGCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: RSRIDQAPQPPG*CPGHWKRSSAP Trigger: TGGAGCTGAGGACCTCTTCCAATGTCCTGGGCATCATCCAGGGGGCTGTGGAGCCTGATCGATACGTGATCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS CCA 72 bp | TGGGGAAGGAGAGCAGGACCCTATACTCATAGGTCTTaGCTGAGTCCAGCCCAGTCGCTGTATCCTTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: WGRRAGPYTHRS*LSPAQSLYPSS Trigger: GCTGGAAGGATACAGCGACTGGGCTGGACTCAGCCAAGACCTATGAGTATAGGGTCCTGCTCTCCTTCCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS CCA 72 bp | TCCCCGGTCAGATTCTTCTCGAAGGGTTGGAAGGAGTaGAAGGTTGTTCCATTGGGGCCCACGACTTCCACG | + |
|
Preference number: 6 (lower is better) Translates to: SPVRFFSKGWKE*KVVPLGPTTST Trigger: CGTGGAAGTCGTGGGCCCCAATGGAACAACCTTCCACTCCTTCCAACCCTTCGAGAAGAATCTGACCGGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS CAA 72 bp | GCACGTGGCTGTAGTGCCTCTCCTCTGGGAAAGCCCTaGGGTTCAGGAATGCCCGTTCTAAGAGCATCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: ARGCSASPLGKP*GSGMPVLRASA Trigger: AGCTGATGCTCTTAGAACGGGCATTCCTGAACCCAAGGGCTTTCCCAGAGGAGAGGCACTACAGCCACGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS CAA 90 bp | TGGATGATGCCCAGGACATTGGAAGAGGTCCTCAGCTCCAGCCTGTaGTGGACACTCACTTTCACCTCACTCCCAGCAGGGAAGCTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: WMMPRTLEEVLSSSL*WTLTFTSLPAGKLP Trigger: TGGAAGCTTCCCTGCTGGGAGTGAGGTGAAAGTGAGTGTCCACAACAGGCTGGAGCTGAGGACCTCTTCCAATGTCCTGGGCATCATCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS TCA 72 bp | TGCTCCGGTCATAGGTGTAGGCAAGGTCCATGGACGTaGTGCCCAGGAAGTGAACGAATGCGGCATAGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: CSGHRCRQGPWT*CPGSERMRHSH Trigger: GTGACTATGCCGCATTCGTTCACTTCCTGGGCATCACGTCCATGGACCTTGCCTACACCTATGACCGGAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS TCA 72 bp | GCCTCTGTACTTCAGCCCAAGCTTCAGATCCGGAGTTaGTTTCCTGGGCCTTGGCATAAGCGTTGGCCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: ASVLQPKLQIRS*FPGPWHKRWPD Trigger: GTCTGGCCAACGCTTATGCCAAGGCCCAGGAAATCAACTCCGGATCTGAAGCTTGGGCTGAAGTACAGAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS GCA 72 bp | CTGCAGGGTCAAGATGTGCTCACCCAAGGATGCAGCTaGAGCCTTAAAGTTCGCCACTGCAGTCACCAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: LQGQDVLTQGCS*SLKVRHCSHQR Trigger: CCTTTGGTGACTGCAGTGGCGAACTTTAAGGCTGCAGCTGCATCCTTGGGTGAGCACATCTTGACCCTGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS CCA 72 bp | TCGCTCCACACCAGAAGGAGGCAGCCGCCAGGAGTTTaGGAAGGTTTCATTAGGCAAGCTCTTCCCGTCATT | + |
|
Preference number: 6 (lower is better) Translates to: SLHTRRRQPPGV*EGFIRQALPVI Trigger: AATGACGGGAAGAGCTTGCCTAATGAAACCTTCCCAAACTCCTGGCGGCTGCCTCCTTCTGGTGTGGAGCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS CCA 72 bp | AGGACATTGGAAGAGGTCCTCAGCTCCAGCCTGTTGTaGACACTCACTTTCACCTCACTCCCAGCAGGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: RTLEEVLSSSLL*TLTFTSLPAGK Trigger: CTTCCCTGCTGGGAGTGAGGTGAAAGTGAGTGTCCACAACAGGCTGGAGCTGAGGACCTCTTCCAATGTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS CCA 72 bp | GCCCAGTGTGCCCAGGCTGGGAACCAGTCCATATACTaGACTAGTGCGGTTGGTATATCGGATCCAGTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: AQCAQAGNQSIY*TSAVGISDPVV Trigger: GACAACTGGATCCGATATACCAACCGCACTAGTCCAGTATATGGACTGGTTCCCAGCCTGGGCACACTGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS CAA 72 bp | GAGTCTGAAGTGCTGGAGGTCAGAGGACTAGTTGCTTaGGGGATGGCAAAGTGCCCAAGGATGATCCCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: ESEVLEVRGLVA*GMAKCPRMIPS Trigger: GCTGGGGATCATCCTTGGGCACTTTGCCATCCCCAAAGCAACTAGTCCTCTGACCTCCAGCACTTCAGACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS CAA 72 bp | CTTCTGAACCTTGGTTGGCATAGACAAGGAGGCCCTTaGGAGTCCCAGGGGGAGCGTAGGCAGCATAAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: LLNLGWHRQGGP*ESQGERRQHKV Trigger: AACCTTATGCTGCCTACGCTCCCCCTGGGACTCCAAAGGGCCTCCTTGTCTATGCCAACCAAGGTTCAGAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS GCA 72 bp | ACCCAAGGATGCAGCTGCAGCCTTAAAGTTCGCCACTaGAGTCACCAAAGGCCCCAGGCTGATGTTCTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: TQGCSCSLKVRH*SHQRPQADVLF Trigger: AAACAGAACATCAGCCTGGGGCCTTTGGTGACTGCAGTGGCGAACTTTAAGGCTGCAGCTGCATCCTTGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS GCA 72 bp | AGAGGATCAGGGCTGCTCTTCTGCAGGGTCAAGATGTaGTCACCCAAGGATGCAGCTGCAGCCTTAAAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: RGSGLLFCRVKM*SPKDAAAALKF Trigger: GAACTTTAAGGCTGCAGCTGCATCCTTGGGTGAGCACATCTTGACCCTGCAGAAGAGCAGCCCTGATCCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS TCA 72 bp | TCAGGAATGCCCGTTCTAAGAGCATCAGCTGGTCATTaGCCATTCGTACCTGCAGAGGATCAGGGCTGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: SGMPVLRASAGH*PFVPAEDQGCS Trigger: AGAGCAGCCCTGATCCTCTGCAGGTACGAATGGTCAATGACCAGCTGATGCTCTTAGAACGGGCATTCCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS CCA 72 bp | ATGTATCAAATGCTGTGTGGTAGGTGGGGTAGATCCTaGCCGAGGTCTTGCTCCGGTCATAGGTGTAGGCAA | + |
|
Preference number: 6 (lower is better) Translates to: MYQMLCGRWGRS*PRSCSGHRCRQ Trigger: TTGCCTACACCTATGACCGGAGCAAGACCTCGGCCAGGATCTACCCCACCTACCACACAGCATTTGATACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS GCA 72 bp | CCAGTTGTCATAGATACTGAGGCCACTGGAGCCTGGTaGACTGATCTCTTTGGTGGCAGAGAAGATCACACT | + |
|
Preference number: 6 (lower is better) Translates to: PVVIDTEATGAW*TDLFGGREDHT Trigger: AGTGTGATCTTCTCTGCCACCAAAGAGATCAGTGCACCAGGCTCCAGTGGCCTCAGTATCTATGACAACTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS CCA 72 bp | GATCCAGTTGTCATAGATACTGAGGCCACTGGAGCCTaGTGCACTGATCTCTTTGGTGGCAGAGAAGATCAC | + |
|
Preference number: 6 (lower is better) Translates to: DPVVIDTEATGA*CTDLFGGREDH Trigger: GTGATCTTCTCTGCCACCAAAGAGATCAGTGCACCAGGCTCCAGTGGCCTCAGTATCTATGACAACTGGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS GCA 72 bp | AGAGAAGATCACACTTTGTACAGGAGGTGTTCCCTGTaGCCGGAGGGTAGCATTGGAGAAAACAGAGATGTC | + |
|
Preference number: 6 (lower is better) Translates to: REDHTLYRRCSL*PEGSIGENRDV Trigger: GACATCTCTGTTTTCTCCAATGCTACCCTCCGGGCACAGGGAACACCTCCTGTACAAAGTGTGATCTTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS CCA 72 bp | CCACATAATCAAATGTATCAAATGCTGTGTGGTAGGTaGGGTAGATCCTGGCCGAGGTCTTGCTCCGGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: PHNQMYQMLCGR*GRSWPRSCSGH Trigger: ATGACCGGAGCAAGACCTCGGCCAGGATCTACCCCACCTACCACACAGCATTTGATACATTTGATTATGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||
| CDS GCA 72 bp | GTCCAGAAACTTCTCCACATAATCAAATGTATCAAATaGTGTGTGGTAGGTGGGGTAGATCCTGGCCGAGGT | + |
|
Preference number: 6 (lower is better) Translates to: VQKLLHIIKCIK*CVVGGVDPGRG Trigger: ACCTCGGCCAGGATCTACCCCACCTACCACACAGCATTTGATACATTTGATTATGTGGAGAAGTTTCTGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044451.4 |
||