Pregenerated sensors for NAALAD2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043943Ensembl transcript IDs: ENSMUST00000001826.15, ENSMUST00000101453.10, ENSMUST00000166825.8, ENSMUST00000172116.8, ENSMUST00000172171.8
Found 172 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CGTCCCACCTTCAGAGCTGACTCTGCTTCTACTGCTATAAGGAGCTaGCTGACACTTCCCCAAAGAAGTTTATCAAACAACCTAATCATT | + |
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Preference number: 1 (lower is better) Translates to: RPTFRADSASTAIRS*LTLPQRSLSNNLII Trigger: AATGATTAGGTTGTTTGATAAACTTCTTTGGGGAAGTGTCAGTCAGCTCCTTATAGCAGTAGAAGCAGAGTCAGCTCTGAAGGTGGGACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172171.8 |
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| 3UTR TCA 90 bp | GGACTTGATATAAGAATGCATGCATGCTATGTGTATATACTACAGTaGATCCAGTCATCTGCCTGTGAGCACTGGGGTTGCTTCCTCTTT | + |
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Preference number: 1 (lower is better) Translates to: GLDIRMHACYVYILQ*IQSSACEHWGCFLF Trigger: AAAGAGGAAGCAACCCCAGTGCTCACAGGCAGATGACTGGATTCACTGTAGTATATACACATAGCATGCATGCATTCTTATATCAAGTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
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| 3UTR-3UTR TCA 90 bp | CCAGTGGTTCTCAACCTTCCTAATGGATCTCCTGAAGGACTCCCTTTCTTTTCTCCAGTCATCTGCCTGTaGGCACTGGGGTTGCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: PVVLNLPNGSPEGLPFFSPVICL*ALGLLP Trigger: AGGAAGCAACCCCAGTGCTCACAGGCAGATGACTGG...AGAAAAGAAAGGGAGTCCTTCAGGAGATCCATTAGGAAGGTTGAGAACCACTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172171.8 |
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| 3UTR-3UTR CCA 90 bp | AGTGAATCCAGTCATCTGCCTGTGAGCACTGGGGTTGCTTCCTCTTTCACTGTCAGCAGGGAATCCATTTaGTCAAGACCCACTCCCCAT | + |
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Preference number: 2 (lower is better) Translates to: SESSHLPVSTGVASSFTVSRESI*SRPTPH Trigger: ATGGGGAGTGGGTCTTGACCAAATGGATTCCCTGCT...GACAGTGAAAGAGGAAGCAACCCCAGTGCTCACAGGCAGATGACTGGATTCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
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| 3UTR-3UTR CCA 90 bp | CCCACCCCCTCCTTTGCCACTAGGAACATTGCAGCCTATGGCTTATTAACTATATCTGCCTGTGAGCACTaGGGTTGCTTCCTCTTTCAC | + |
|
Preference number: 2 (lower is better) Translates to: PTPSFATRNIAAYGLLTISACEH*GCFLFH Trigger: GTGAAAGAGGAAGCAACCCCAGTGCTCACAGGCAGA...TATAGTTAATAAGCCATAGGCTGCAATGTTCCTAGTGGCAAAGGAGGGGGTGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172171.8 |
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| 3UTR-3UTR CCA 90 bp | CTGTCTCATGTACATCGTAAGGGGGTTCAGCAAGCTTTGTGTTTGTCTAACACTAGCAGGGAATCCATTTaGTCAAGACCCACTCCCCAT | + |
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Preference number: 2 (lower is better) Translates to: LSHVHRKGVQQALCLSNTSRESI*SRPTPH Trigger: ATGGGGAGTGGGTCTTGACCAAATGGATTCCCTGCT...AGTGTTAGACAAACACAAAGCTTGCTGAACCCCCTTACGATGTACATGAGACAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172171.8 |
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| 3UTR-3UTR CCA 90 bp | AGTGGCCTTGTCCTTGTCTTTCTGACCTGTCTCATGTACATCGTAAGGGGGTTCATGTCCTGTCTCTTCTaGAATCTTTTGCTTGGTTAT | + |
|
Preference number: 2 (lower is better) Translates to: SGLVLVFLTCLMYIVRGFMSCLF*NLLLGY Trigger: ATAACCAAGCAAAAGATTCCAGAAGAGACAGGACAT...GAACCCCCTTACGATGTACATGAGACAGGTCAGAAAGACAAGGACAAGGCCACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172171.8 |
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| 3UTR-3UTR TCA 90 bp | CTTCTGGAATCTTTTGCTTGGTTATGCGTAGATAACACAGTTGTACAGTTCATGGTGTATATACTACAGTaGATCCAGTCATCTGCCTGT | + |
|
Preference number: 2 (lower is better) Translates to: LLESFAWLCVDNTVVQFMVYILQ*IQSSAC Trigger: ACAGGCAGATGACTGGATTCACTGTAGTATATACAC...CATGAACTGTACAACTGTGTTATCTACGCATAACCAAGCAAAAGATTCCAGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172171.8 |
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| 3UTR-3UTR CCA 90 bp | CTGTCTCATGTACATCGTAAGGGGGTTCAGCAAGCTTTGTGTTTGTCTAACACTCCATTTCACATTCTCTaGCTCTTATATTCTGTTCAT | + |
|
Preference number: 2 (lower is better) Translates to: LSHVHRKGVQQALCLSNTPFHIL*LLYSVH Trigger: ATGAACAGAATATAAGAGCCAGAGAATGTGAAATGG...AGTGTTAGACAAACACAAAGCTTGCTGAACCCCCTTACGATGTACATGAGACAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172171.8 |
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| 3UTR TCA 72 bp | CATGCTCTTCTGCTGATATCGTCCCACCTTCAGAGCTaGCTCTGCTTCTACTGCTATAAGGAGCTGACTGAC | + |
|
Preference number: 3 (lower is better) Translates to: HALLLISSHLQS*LCFYCYKELTD Trigger: GTCAGTCAGCTCCTTATAGCAGTAGAAGCAGAGTCAGCTCTGAAGGTGGGACGATATCAGCAGAAGAGCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172171.8 |
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| 3UTR-3UTR CAA 90 bp | ATCCAGTCATCTGCCTGTGAGCACTGGGGTTGCTTCCTCTTTCACTGTCACTTCCGCAATATTTTTCCATaGATGAAGCTACTCGACAGA | + |
|
Preference number: 3 (lower is better) Translates to: IQSSACEHWGCFLFHCHFRNIFP*MKLLDR Trigger: TCTGTCGAGTAGCTTCATCAATGGAAAAATATTGCG...GAAGTGACAGTGAAAGAGGAAGCAACCCCAGTGCTCACAGGCAGATGACTGGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
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| 3UTR-3UTR CAA 90 bp | ACTGTTAGCAGGGAATCCATTTGGTCAAGACCCACTCCCCATCAGTTTCCCTCTCGCAATATTTTTCCATaGATGAAGCTACTCGACAGA | + |
|
Preference number: 3 (lower is better) Translates to: TVSRESIWSRPTPHQFPSRNIFP*MKLLDR Trigger: TCTGTCGAGTAGCTTCATCAATGGAAAAATATTGCG...AGAGGGAAACTGATGGGGAGTGGGTCTTGACCAAATGGATTCCCTGCTAACAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
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| 3UTR-3UTR CAA 90 bp | CCCACCCCCTCCTTTGCCACTAGGAACATTGCAGCCTATGGCTTATTAACTATACGCAATATTTTTCCATaGATGAAGCTACTCGACAGA | + |
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Preference number: 3 (lower is better) Translates to: PTPSFATRNIAAYGLLTIRNIFP*MKLLDR Trigger: TCTGTCGAGTAGCTTCATCAATGGAAAAATATTGCG...TATAGTTAATAAGCCATAGGCTGCAATGTTCCTAGTGGCAAAGGAGGGGGTGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000172171.8 |
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| 3UTR TCA 72 bp | ATAAGAATGCATGCATGCTATGTGTATATACTACAGTaGATCCAGTCATCTGCCTGTGAGCACTGGGGTTGC | + |
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Preference number: 3 (lower is better) Translates to: IRMHACYVYILQ*IQSSACEHWGC Trigger: GCAACCCCAGTGCTCACAGGCAGATGACTGGATTCACTGTAGTATATACACATAGCATGCATGCATTCTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
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| 3UTR CCA 72 bp | AGTAGAAAGGTATCAGATTCCAAACATAATGGTGCTTaGCCATGCTCTTCTGCTGATATCGTCCCACCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: SRKVSDSKHNGA*PCSSADIVPPS Trigger: TGAAGGTGGGACGATATCAGCAGAAGAGCATGGCCAAGCACCATTATGTTTGGAATCTGATACCTTTCTACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172171.8 |
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| 3UTR TCA 72 bp | TTCAGAGCTGACTCTGCTTCTACTGCTATAAGGAGCTaGCTGACACTTCCCCAAAGAAGTTTATCAAACAAC | + |
|
Preference number: 3 (lower is better) Translates to: FRADSASTAIRS*LTLPQRSLSNN Trigger: GTTGTTTGATAAACTTCTTTGGGGAAGTGTCAGTCAGCTCCTTATAGCAGTAGAAGCAGAGTCAGCTCTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172171.8 |
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| 3UTR GCA 72 bp | AATGTCCTGTCTCTTCTGGAATCTTTTGCTTGGTTATaGGTAGATAACACAGTTGTACAGTTCATGTGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: NVLSLLESFAWL*VDNTVVQFMCA Trigger: TGCACACATGAACTGTACAACTGTGTTATCTACGCATAACCAAGCAAAAGATTCCAGAAGAGACAGGACATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172171.8 |
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| CDS-3UTR TCA 90 bp | AGTGAATCCAGTCATCTGCCTGTGAGCACTGGGGTTGCTTCCTCTTTCACTGTCCTGGATAGCCTGGAGTaGGTGGGTCACCTGCCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SESSHLPVSTGVASSFTVLDSLE*VGHLPH Trigger: ATGGGGCAGGTGACCCACTCACTCCAGGCTATCCAG...GACAGTGAAAGAGGAAGCAACCCCAGTGCTCACAGGCAGATGACTGGATTCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
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| CDS-3UTR TCA 90 bp | ACTGTTAGCAGGGAATCCATTTGGTCAAGACCCACTCCCCATCAGTTTCCCTCTCTGGATAGCCTGGAGTaGGTGGGTCACCTGCCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: TVSRESIWSRPTPHQFPSLDSLE*VGHLPH Trigger: ATGGGGCAGGTGACCCACTCACTCCAGGCTATCCAG...AGAGGGAAACTGATGGGGAGTGGGTCTTGACCAAATGGATTCCCTGCTAACAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
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| CDS-3UTR TCA 90 bp | AGCAGCACTGTTAGCAGGGAATCCATTTGGTCAAGACCCACTCCCCATCAGTTTCTGGATAGCCTGGAGTaGGTGGGTCACCTGCCCCAT | + |
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Preference number: 4 (lower is better) Translates to: SSTVSRESIWSRPTPHQFLDSLE*VGHLPH Trigger: ATGGGGCAGGTGACCCACTCACTCCAGGCTATCCAG...AAACTGATGGGGAGTGGGTCTTGACCAAATGGATTCCCTGCTAACAGTGCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
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| CDS-3UTR TCA 90 bp | AGTGAATCCAGTCATCTGCCTGTGAGCACTGGGGTTGCTTCCTCTTTCACTGTCTTCAGCCCATTCAGTTaGCCCCAGCAGCCCAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: SESSHLPVSTGVASSFTVFSPFS*PQQPKL Trigger: GAGTTTGGGCTGCTGGGGTCAACTGAATGGGCTGAA...GACAGTGAAAGAGGAAGCAACCCCAGTGCTCACAGGCAGATGACTGGATTCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
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| CDS-3UTR CCA 90 bp | ATCCAGTCATCTGCCTGTGAGCACTGGGGTTGCTTCCTCTTTCACTGTCACTTCATAGCCTGGAGTGAGTaGGTCACCTGCCCCATTCAG | + |
|
Preference number: 4 (lower is better) Translates to: IQSSACEHWGCFLFHCHFIAWSE*VTCPIQ Trigger: CTGAATGGGGCAGGTGACCCACTCACTCCAGGCTAT...GAAGTGACAGTGAAAGAGGAAGCAACCCCAGTGCTCACAGGCAGATGACTGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
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| CDS-3UTR CCA 90 bp | GCACTGTTAGCAGGGAATCCATTTGGTCAAGACCCACTCCCCATCAGTTTCCCTATAGCCTGGAGTGAGTaGGTCACCTGCCCCATTCAG | + |
|
Preference number: 4 (lower is better) Translates to: ALLAGNPFGQDPLPISFPIAWSE*VTCPIQ Trigger: CTGAATGGGGCAGGTGACCCACTCACTCCAGGCTAT...AGGGAAACTGATGGGGAGTGGGTCTTGACCAAATGGATTCCCTGCTAACAGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
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| CDS-3UTR CCA 90 bp | AGTGAATCCAGTCATCTGCCTGTGAGCACTGGGGTTGCTTCCTCTTTCACTGTCATAGCCTGGAGTGAGTaGGTCACCTGCCCCATTCAG | + |
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Preference number: 4 (lower is better) Translates to: SESSHLPVSTGVASSFTVIAWSE*VTCPIQ Trigger: CTGAATGGGGCAGGTGACCCACTCACTCCAGGCTAT...GACAGTGAAAGAGGAAGCAACCCCAGTGCTCACAGGCAGATGACTGGATTCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
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| CDS-3UTR GCA 90 bp | ATTTGGTCAAGACCCACTCCCCATCAGTTTCCCTCTCAGACACCACGCAATATTACCTCTGACTGCAACTaGAGGCCTGGGGGCTGCAAT | + |
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Preference number: 4 (lower is better) Translates to: IWSRPTPHQFPSQTPRNITSDCN*RPGGCN Trigger: ATTGCAGCCCCCAGGCCTGCAGTTGCAGTCAGAGGT...AATATTGCGTGGTGTCTGAGAGGGAAACTGATGGGGAGTGGGTCTTGACCAAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001826.15 ENSMUST00000172171.8 |
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| CDS-3UTR GCA 90 bp | AGTGAATCCAGTCATCTGCCTGTGAGCACTGGGGTTGCTTCCTCTTTCACTGTCCAGTGTCCCCGCTGCTaGCTGAATTGTAAAAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: SESSHLPVSTGVASSFTVQCPRC*LNCKSC Trigger: GCAGCTTTTACAATTCAGGCAGCAGCGGGGACACTG...GACAGTGAAAGAGGAAGCAACCCCAGTGCTCACAGGCAGATGACTGGATTCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
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| CDS-3UTR GCA 90 bp | GTTAGCAGGGAATCCATTTGGTCAAGACCCACTCCCCATCAGTTTCCCTCTCAGCAGTGTCCCCGCTGCTaGCTGAATTGTAAAAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: VSRESIWSRPTPHQFPSQQCPRC*LNCKSC Trigger: GCAGCTTTTACAATTCAGGCAGCAGCGGGGACACTG...CTGAGAGGGAAACTGATGGGGAGTGGGTCTTGACCAAATGGATTCCCTGCTAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
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| CDS-3UTR GCA 90 bp | AGTGAATCCAGTCATCTGCCTGTGAGCACTGGGGTTGCTTCCTCTTTCACTGTCGGTCAGTGTCCCCGCTaGTGCCTGAATTGTAAAAGC | + |
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Preference number: 4 (lower is better) Translates to: SESSHLPVSTGVASSFTVGQCPR*CLNCKS Trigger: GCTTTTACAATTCAGGCAGCAGCGGGGACACTGACC...GACAGTGAAAGAGGAAGCAACCCCAGTGCTCACAGGCAGATGACTGGATTCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
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| CDS-3UTR CCA 90 bp | AGTGAATCCAGTCATCTGCCTGTGAGCACTGGGGTTGCTTCCTCTTTCACTGTCCTTCCAGCTTTTGTCTaGTGGAGCAGCTCCTCCCAA | + |
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Preference number: 4 (lower is better) Translates to: SESSHLPVSTGVASSFTVLPAFV*WSSSSQ Trigger: TTGGGAGGAGCTGCTCCACCAGACAAAAGCTGGAAG...GACAGTGAAAGAGGAAGCAACCCCAGTGCTCACAGGCAGATGACTGGATTCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
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| CDS-3UTR GCA 90 bp | ATCCAGTCATCTGCCTGTGAGCACTGGGGTTGCTTCCTCTTTCACTGTCACTTCATTTCCTCTCTGAGCTaGAGCTCCAGGAAGGTTCCA | + |
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Preference number: 4 (lower is better) Translates to: IQSSACEHWGCFLFHCHFISSLS*SSRKVP Trigger: TGGAACCTTCCTGGAGCTGCAGCTCAGAGAGGAAAT...GAAGTGACAGTGAAAGAGGAAGCAACCCCAGTGCTCACAGGCAGATGACTGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
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| CDS-3UTR GCA 90 bp | GCACTGTTAGCAGGGAATCCATTTGGTCAAGACCCACTCCCCATCAGTTTCCCTATTTCCTCTCTGAGCTaGAGCTCCAGGAAGGTTCCA | + |
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Preference number: 4 (lower is better) Translates to: ALLAGNPFGQDPLPISFPISSLS*SSRKVP Trigger: TGGAACCTTCCTGGAGCTGCAGCTCAGAGAGGAAAT...AGGGAAACTGATGGGGAGTGGGTCTTGACCAAATGGATTCCCTGCTAACAGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
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| CDS-3UTR GCA 90 bp | ACTGTTAGCAGGGAATCCATTTGGTCAAGACCCACTCCCCATCAGTTTCCCTCTCAGTGTCCCCGCTGCTaGCTGAATTGTAAAAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: TVSRESIWSRPTPHQFPSQCPRC*LNCKSC Trigger: GCAGCTTTTACAATTCAGGCAGCAGCGGGGACACTG...AGAGGGAAACTGATGGGGAGTGGGTCTTGACCAAATGGATTCCCTGCTAACAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
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| CDS-3UTR GCA 90 bp | AGCAGCACTGTTAGCAGGGAATCCATTTGGTCAAGACCCACTCCCCATCAGTTTGGTCAGTGTCCCCGCTaGTGCCTGAATTGTAAAAGC | + |
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Preference number: 4 (lower is better) Translates to: SSTVSRESIWSRPTPHQFGQCPR*CLNCKS Trigger: GCTTTTACAATTCAGGCAGCAGCGGGGACACTGACC...AAACTGATGGGGAGTGGGTCTTGACCAAATGGATTCCCTGCTAACAGTGCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
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| CDS-3UTR CCA 90 bp | GTTAGCAGGGAATCCATTTGGTCAAGACCCACTCCCCATCAGTTTCCCTCTCAGCCATCCTTTGGGATATaGCTGCACATCAGGGGCAAA | + |
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Preference number: 4 (lower is better) Translates to: VSRESIWSRPTPHQFPSQPSFGI*LHIRGK Trigger: TTTGCCCCTGATGTGCAGCCATATCCCAAAGGATGG...CTGAGAGGGAAACTGATGGGGAGTGGGTCTTGACCAAATGGATTCCCTGCTAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
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| CDS-3UTR CCA 90 bp | ACTGTTAGCAGGGAATCCATTTGGTCAAGACCCACTCCCCATCAGTTTCCCTCTTTTAGCTGGATAGCCTaGAGTGAGTGGGTCACCTGC | + |
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Preference number: 4 (lower is better) Translates to: TVSRESIWSRPTPHQFPSFSWIA*SEWVTC Trigger: GCAGGTGACCCACTCACTCCAGGCTATCCAGCTAAA...AGAGGGAAACTGATGGGGAGTGGGTCTTGACCAAATGGATTCCCTGCTAACAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
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| CDS-3UTR CCA 90 bp | AGCAGCACTGTTAGCAGGGAATCCATTTGGTCAAGACCCACTCCCCATCAGTTTCCAGCTTTTGTCTGGTaGAGCAGCTCCTCCCAAGTT | + |
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Preference number: 4 (lower is better) Translates to: SSTVSRESIWSRPTPHQFPAFVW*SSSSQV Trigger: AACTTGGGAGGAGCTGCTCCACCAGACAAAAGCTGG...AAACTGATGGGGAGTGGGTCTTGACCAAATGGATTCCCTGCTAACAGTGCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
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| CDS-3UTR CCA 90 bp | AGCAGCACTGTTAGCAGGGAATCCATTTGGTCAAGACCCACTCCCCATCAGTTTCTTCCAGCTTTTGTCTaGTGGAGCAGCTCCTCCCAA | + |
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Preference number: 4 (lower is better) Translates to: SSTVSRESIWSRPTPHQFLPAFV*WSSSSQ Trigger: TTGGGAGGAGCTGCTCCACCAGACAAAAGCTGGAAG...AAACTGATGGGGAGTGGGTCTTGACCAAATGGATTCCCTGCTAACAGTGCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
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| CDS-3UTR CCA 90 bp | ACTGTTAGCAGGGAATCCATTTGGTCAAGACCCACTCCCCATCAGTTTCCCTCTCTTCCAGCTTTTGTCTaGTGGAGCAGCTCCTCCCAA | + |
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Preference number: 4 (lower is better) Translates to: TVSRESIWSRPTPHQFPSLPAFV*WSSSSQ Trigger: TTGGGAGGAGCTGCTCCACCAGACAAAAGCTGGAAG...AGAGGGAAACTGATGGGGAGTGGGTCTTGACCAAATGGATTCCCTGCTAACAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
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| CDS-3UTR TCA 90 bp | GTTAGCAGGGAATCCATTTGGTCAAGACCCACTCCCCATCAGTTTCCCTCTCAGAATGCTCCTCGTAACTaGGCCACAGACAGTTGCTTT | + |
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Preference number: 4 (lower is better) Translates to: VSRESIWSRPTPHQFPSQNAPRN*ATDSCF Trigger: AAAGCAACTGTCTGTGGCTCAGTTACGAGGAGCATT...CTGAGAGGGAAACTGATGGGGAGTGGGTCTTGACCAAATGGATTCCCTGCTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
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| CDS-3UTR TCA 90 bp | GCACTGTTAGCAGGGAATCCATTTGGTCAAGACCCACTCCCCATCAGTTTCCCTTGCTTGGAGCAAAGATaGTGTGCCTGTAGAACTTCC | + |
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Preference number: 4 (lower is better) Translates to: ALLAGNPFGQDPLPISFPCLEQR*CACRTS Trigger: GGAAGTTCTACAGGCACATCATCTTTGCTCCAAGCA...AGGGAAACTGATGGGGAGTGGGTCTTGACCAAATGGATTCCCTGCTAACAGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
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| CDS-3UTR TCA 90 bp | GTTAGCAGGGAATCCATTTGGTCAAGACCCACTCCCCATCAGTTTCCCTCTCAGTGCTTGGAGCAAAGATaGTGTGCCTGTAGAACTTCC | + |
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Preference number: 4 (lower is better) Translates to: VSRESIWSRPTPHQFPSQCLEQR*CACRTS Trigger: GGAAGTTCTACAGGCACATCATCTTTGCTCCAAGCA...CTGAGAGGGAAACTGATGGGGAGTGGGTCTTGACCAAATGGATTCCCTGCTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
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| CDS-3UTR GCA 90 bp | CTGTCTCATGTACATCGTAAGGGGGTTCAGCAAGCTTTGTGTTTGTCTAACACTACCTCTGACTGCAACTaGAGGCCTGGGGGCTGCAAT | + |
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Preference number: 4 (lower is better) Translates to: LSHVHRKGVQQALCLSNTTSDCN*RPGGCN Trigger: ATTGCAGCCCCCAGGCCTGCAGTTGCAGTCAGAGGT...AGTGTTAGACAAACACAAAGCTTGCTGAACCCCCTTACGATGTACATGAGACAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000172171.8 |
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| CDS-3UTR GCA 90 bp | AGCAGCACTGTTAGCAGGGAATCCATTTGGTCAAGACCCACTCCCCATCAGTTTATTTCCTCTCTGAGCTaGAGCTCCAGGAAGGTTCCA | + |
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Preference number: 4 (lower is better) Translates to: SSTVSRESIWSRPTPHQFISSLS*SSRKVP Trigger: TGGAACCTTCCTGGAGCTGCAGCTCAGAGAGGAAAT...AAACTGATGGGGAGTGGGTCTTGACCAAATGGATTCCCTGCTAACAGTGCTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
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| CDS-3UTR GCA 90 bp | AGTGAATCCAGTCATCTGCCTGTGAGCACTGGGGTTGCTTCCTCTTTCACTGTCAATCTCTTGCAAAACTaGTGTCCCAGTGGTAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SESSHLPVSTGVASSFTVNLLQN*CPSGRV Trigger: GACCCTACCACTGGGACAGCAGTTTTGCAAGAGATT...GACAGTGAAAGAGGAAGCAACCCCAGTGCTCACAGGCAGATGACTGGATTCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS-3UTR GCA 90 bp | TTAGCAGGGAATCCATTTGGTCAAGACCCACTCCCCATCAGTTTCCCTCTCAGACAGCCCAAACTCCTCTaGATCCCAGCTGGCAAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LAGNPFGQDPLPISFPLRQPKLL*IPAGKN Trigger: ATTTTTGCCAGCTGGGATGCAGAGGAGTTTGGGCTG...TCTGAGAGGGAAACTGATGGGGAGTGGGTCTTGACCAAATGGATTCCCTGCTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS-3UTR GCA 90 bp | ACTGTTAGCAGGGAATCCATTTGGTCAAGACCCACTCCCCATCAGTTTCCCTCTATGTTTCTTCACTTCTaGCCAGGCCAAGGAAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: TVSRESIWSRPTPHQFPSMFLHF*PGQGRV Trigger: GACCCTTCCTTGGCCTGGGCAGAAGTGAAGAAACAT...AGAGGGAAACTGATGGGGAGTGGGTCTTGACCAAATGGATTCCCTGCTAACAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS-3UTR CCA 90 bp | GTTAGCAGGGAATCCATTTGGTCAAGACCCACTCCCCATCAGTTTCCCTCTCAGGAAGGTTCCATCCTTTaGGATATGGCTGCACATCAG | + |
|
Preference number: 4 (lower is better) Translates to: VSRESIWSRPTPHQFPSQEGSIL*DMAAHQ Trigger: CTGATGTGCAGCCATATCCCAAAGGATGGAACCTTC...CTGAGAGGGAAACTGATGGGGAGTGGGTCTTGACCAAATGGATTCCCTGCTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS-3UTR CCA 90 bp | AGTGAATCCAGTCATCTGCCTGTGAGCACTGGGGTTGCTTCCTCTTTCACTGTCGGTGTATTCTTTAGCTaGATAGCCTGGAGTGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SESSHLPVSTGVASSFTVGVFFS*IAWSEW Trigger: CCACTCACTCCAGGCTATCCAGCTAAAGAATACACC...GACAGTGAAAGAGGAAGCAACCCCAGTGCTCACAGGCAGATGACTGGATTCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS-3UTR CCA 90 bp | GTTAGCAGGGAATCCATTTGGTCAAGACCCACTCCCCATCAGTTTCCCTCTCAGGGTGTATTCTTTAGCTaGATAGCCTGGAGTGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VSRESIWSRPTPHQFPSQGVFFS*IAWSEW Trigger: CCACTCACTCCAGGCTATCCAGCTAAAGAATACACC...CTGAGAGGGAAACTGATGGGGAGTGGGTCTTGACCAAATGGATTCCCTGCTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS-3UTR CCA 90 bp | ATTTGGTCAAGACCCACTCCCCATCAGTTTCCCTCTCAGACACCACGCAATATTCCAGCTTTTGTCTGGTaGAGCAGCTCCTCCCAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: IWSRPTPHQFPSQTPRNIPAFVW*SSSSQV Trigger: AACTTGGGAGGAGCTGCTCCACCAGACAAAAGCTGG...AATATTGCGTGGTGTCTGAGAGGGAAACTGATGGGGAGTGGGTCTTGACCAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS-3UTR TCA 90 bp | CTGTCTCATGTACATCGTAAGGGGGTTCAGCAAGCTTTGTGTTTGTCTAACACTTTCAGCCCATTCAGTTaGCCCCAGCAGCCCAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: LSHVHRKGVQQALCLSNTFSPFS*PQQPKL Trigger: GAGTTTGGGCTGCTGGGGTCAACTGAATGGGCTGAA...AGTGTTAGACAAACACAAAGCTTGCTGAACCCCCTTACGATGTACATGAGACAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172171.8 |
||
| CDS-3UTR TCA 90 bp | AGCAGCACTGTTAGCAGGGAATCCATTTGGTCAAGACCCACTCCCCATCAGTTTAATGCTCCTCGTAACTaGGCCACAGACAGTTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SSTVSRESIWSRPTPHQFNAPRN*ATDSCF Trigger: AAAGCAACTGTCTGTGGCTCAGTTACGAGGAGCATT...AAACTGATGGGGAGTGGGTCTTGACCAAATGGATTCCCTGCTAACAGTGCTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS-3UTR TCA 90 bp | AGTGGCCTTGTCCTTGTCTTTCTGACCTGTCTCATGTACATCGTAAGGGGGTTCAATGCTCCTCGTAACTaGGCCACAGACAGTTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SGLVLVFLTCLMYIVRGFNAPRN*ATDSCF Trigger: AAAGCAACTGTCTGTGGCTCAGTTACGAGGAGCATT...GAACCCCCTTACGATGTACATGAGACAGGTCAGAAAGACAAGGACAAGGCCACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172171.8 |
||
| CDS-3UTR TCA 90 bp | ATTTGGTCAAGACCCACTCCCCATCAGTTTCCCTCTCAGACACCACGCAATATTGTCCCCGCTGCTGCCTaGATTGTAAAAGCTGCAATA | + |
|
Preference number: 4 (lower is better) Translates to: IWSRPTPHQFPSQTPRNIVPAAA*IVKAAI Trigger: TATTGCAGCTTTTACAATTCAGGCAGCAGCGGGGAC...AATATTGCGTGGTGTCTGAGAGGGAAACTGATGGGGAGTGGGTCTTGACCAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS-3UTR GCA 90 bp | AGCAGCACTGTTAGCAGGGAATCCATTTGGTCAAGACCCACTCCCCATCAGTTTAATCTCTTGCAAAACTaGTGTCCCAGTGGTAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SSTVSRESIWSRPTPHQFNLLQN*CPSGRV Trigger: GACCCTACCACTGGGACAGCAGTTTTGCAAGAGATT...AAACTGATGGGGAGTGGGTCTTGACCAAATGGATTCCCTGCTAACAGTGCTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS-3UTR GCA 90 bp | AGTGAATCCAGTCATCTGCCTGTGAGCACTGGGGTTGCTTCCTCTTTCACTGTCACTGGAGATCTCTCTTaGCACTTTGTAAACCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SESSHLPVSTGVASSFTVTGDLS*HFVNQL Trigger: CAGCTGGTTTACAAAGTGGCAAGAGAGATCTCCAGT...GACAGTGAAAGAGGAAGCAACCCCAGTGCTCACAGGCAGATGACTGGATTCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS-3UTR GCA 90 bp | ATCCAGTCATCTGCCTGTGAGCACTGGGGTTGCTTCCTCTTTCACTGTCACTTCACTGGAGATCTCTCTTaGCACTTTGTAAACCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: IQSSACEHWGCFLFHCHFTGDLS*HFVNQL Trigger: CAGCTGGTTTACAAAGTGGCAAGAGAGATCTCCAGT...GAAGTGACAGTGAAAGAGGAAGCAACCCCAGTGCTCACAGGCAGATGACTGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS-3UTR CCA 90 bp | GCACTGTTAGCAGGGAATCCATTTGGTCAAGACCCACTCCCCATCAGTTTCCCTTCCGTTCCTGCCAGATaGGGAAGTTTTGTAAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ALLAGNPFGQDPLPISFPSVPAR*GSFVKE Trigger: TTCCTTTACAAAACTTCCCCATCTGGCAGGAACGGA...AGGGAAACTGATGGGGAGTGGGTCTTGACCAAATGGATTCCCTGCTAACAGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS-3UTR CCA 90 bp | ATCCAGTCATCTGCCTGTGAGCACTGGGGTTGCTTCCTCTTTCACTGTCACTTCTCCGTTCCTGCCAGATaGGGAAGTTTTGTAAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: IQSSACEHWGCFLFHCHFSVPAR*GSFVKE Trigger: TTCCTTTACAAAACTTCCCCATCTGGCAGGAACGGA...GAAGTGACAGTGAAAGAGGAAGCAACCCCAGTGCTCACAGGCAGATGACTGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS-3UTR CCA 90 bp | TCTAAGTGGCCTTGTCCTTGTCTTTCTGACCTGTCTCATGTACATCGTAAGGGGCCATCCTTTGGGATATaGCTGCACATCAGGGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SKWPCPCLSDLSHVHRKGPSFGI*LHIRGK Trigger: TTTGCCCCTGATGTGCAGCCATATCCCAAAGGATGG...CCCCTTACGATGTACATGAGACAGGTCAGAAAGACAAGGACAAGGCCACTTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172171.8 |
||
| CDS-3UTR CCA 90 bp | ACTGTTAGCAGGGAATCCATTTGGTCAAGACCCACTCCCCATCAGTTTCCCTCTGAAGGTTCCATCCTTTaGGATATGGCTGCACATCAG | + |
|
Preference number: 4 (lower is better) Translates to: TVSRESIWSRPTPHQFPSEGSIL*DMAAHQ Trigger: CTGATGTGCAGCCATATCCCAAAGGATGGAACCTTC...AGAGGGAAACTGATGGGGAGTGGGTCTTGACCAAATGGATTCCCTGCTAACAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS-3UTR CCA 90 bp | GCACTGTTAGCAGGGAATCCATTTGGTCAAGACCCACTCCCCATCAGTTTCCCTAACCATCATCAGGACTaGAGATCTCTCTTGCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: ALLAGNPFGQDPLPISFPNHHQD*RSLLPL Trigger: AAGTGGCAAGAGAGATCTCCAGTCCTGATGATGGTT...AGGGAAACTGATGGGGAGTGGGTCTTGACCAAATGGATTCCCTGCTAACAGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS-3UTR TCA 90 bp | GCACTGTTAGCAGGGAATCCATTTGGTCAAGACCCACTCCCCATCAGTTTCCCTCTCTTTATTTTCAGGTaGAGGGTCTTTTTCCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ALLAGNPFGQDPLPISFPLFIFR*RVFFQP Trigger: TGGCTGGAAAAAGACCCTTCACCTGAAAATAAAGAG...AGGGAAACTGATGGGGAGTGGGTCTTGACCAAATGGATTCCCTGCTAACAGTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS-3UTR TCA 90 bp | TTAGCAGGGAATCCATTTGGTCAAGACCCACTCCCCATCAGTTTCCCTCTCAGATGTGTAAGTCTTCTGTaGAAATCTGAAGCAGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LAGNPFGQDPLPISFPLRCVSLL*KSEAAS Trigger: GGAGGCTGCTTCAGATTTTCACAGAAGACTTACACA...TCTGAGAGGGAAACTGATGGGGAGTGGGTCTTGACCAAATGGATTCCCTGCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS-3UTR TCA 90 bp | ATTTGGTCAAGACCCACTCCCCATCAGTTTCCCTCTCAGACACCACGCAATATTTGCTTGGAGCAAAGATaGTGTGCCTGTAGAACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: IWSRPTPHQFPSQTPRNICLEQR*CACRTS Trigger: GGAAGTTCTACAGGCACATCATCTTTGCTCCAAGCA...AATATTGCGTGGTGTCTGAGAGGGAAACTGATGGGGAGTGGGTCTTGACCAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS-3UTR GCA 90 bp | TCTAAACCAGTGGTTCTCAACCTTCCTAATGGATCTCCTGAAGGACTCCCTTTCCAGCCCAAACTCCTCTaGATCCCAGCTGGCAAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SKPVVLNLPNGSPEGLPFQPKLL*IPAGKN Trigger: ATTTTTGCCAGCTGGGATGCAGAGGAGTTTGGGCTG...GAAAGGGAGTCCTTCAGGAGATCCATTAGGAAGGTTGAGAACCACTGGTTTAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172171.8 |
||
| CDS-3UTR GCA 90 bp | ACTGTTAGCAGGGAATCCATTTGGTCAAGACCCACTCCCCATCAGTTTCCCTCTACTGGAGATCTCTCTTaGCACTTTGTAAACCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TVSRESIWSRPTPHQFPSTGDLS*HFVNQL Trigger: CAGCTGGTTTACAAAGTGGCAAGAGAGATCTCCAGT...AGAGGGAAACTGATGGGGAGTGGGTCTTGACCAAATGGATTCCCTGCTAACAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS-3UTR GCA 90 bp | ATCCAGTCATCTGCCTGTGAGCACTGGGGTTGCTTCCTCTTTCACTGTCACTTCGCATGGTTTCTCAATTaGTGGTCGTGTTTCTTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: IQSSACEHWGCFLFHCHFAWFLN*WSCFLD Trigger: ATCCAAGAAACACGACCAGCAATTGAGAAACCATGC...GAAGTGACAGTGAAAGAGGAAGCAACCCCAGTGCTCACAGGCAGATGACTGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS-3UTR GCA 90 bp | CTGTCTCATGTACATCGTAAGGGGGTTCAGCAAGCTTTGTGTTTGTCTAACACTGGTCAGTGTCCCCGCTaGTGCCTGAATTGTAAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSHVHRKGVQQALCLSNTGQCPR*CLNCKS Trigger: GCTTTTACAATTCAGGCAGCAGCGGGGACACTGACC...AGTGTTAGACAAACACAAAGCTTGCTGAACCCCCTTACGATGTACATGAGACAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000172171.8 |
||
| CDS-3UTR CCA 90 bp | TCTAAGTGGCCTTGTCCTTGTCTTTCTGACCTGTCTCATGTACATCGTAAGGGGGAAGGTTCCATCCTTTaGGATATGGCTGCACATCAG | + |
|
Preference number: 4 (lower is better) Translates to: SKWPCPCLSDLSHVHRKGEGSIL*DMAAHQ Trigger: CTGATGTGCAGCCATATCCCAAAGGATGGAACCTTC...CCCCTTACGATGTACATGAGACAGGTCAGAAAGACAAGGACAAGGCCACTTAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172171.8 |
||
| CDS-3UTR CCA 90 bp | CTGTCTCATGTACATCGTAAGGGGGTTCAGCAAGCTTTGTGTTTGTCTAACACTTTTAGCTGGATAGCCTaGAGTGAGTGGGTCACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LSHVHRKGVQQALCLSNTFSWIA*SEWVTC Trigger: GCAGGTGACCCACTCACTCCAGGCTATCCAGCTAAA...AGTGTTAGACAAACACAAAGCTTGCTGAACCCCCTTACGATGTACATGAGACAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172171.8 |
||
| CDS-3UTR CCA 90 bp | ATTTGGTCAAGACCCACTCCCCATCAGTTTCCCTCTCAGACACCACGCAATATTGGTGTATTCTTTAGCTaGATAGCCTGGAGTGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: IWSRPTPHQFPSQTPRNIGVFFS*IAWSEW Trigger: CCACTCACTCCAGGCTATCCAGCTAAAGAATACACC...AATATTGCGTGGTGTCTGAGAGGGAAACTGATGGGGAGTGGGTCTTGACCAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS-3UTR CCA 90 bp | ATCCAGTCATCTGCCTGTGAGCACTGGGGTTGCTTCCTCTTTCACTGTCACTTCTCAAATGACACTGCATaGTTTCTCAATTGCTGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: IQSSACEHWGCFLFHCHFSNDTA*FLNCWS Trigger: CGACCAGCAATTGAGAAACCATGCAGTGTCATTTGA...GAAGTGACAGTGAAAGAGGAAGCAACCCCAGTGCTCACAGGCAGATGACTGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS-3UTR CCA 90 bp | GTTAGCAGGGAATCCATTTGGTCAAGACCCACTCCCCATCAGTTTCCCTCTCAGTCAAATGACACTGCATaGTTTCTCAATTGCTGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: VSRESIWSRPTPHQFPSQSNDTA*FLNCWS Trigger: CGACCAGCAATTGAGAAACCATGCAGTGTCATTTGA...CTGAGAGGGAAACTGATGGGGAGTGGGTCTTGACCAAATGGATTCCCTGCTAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS-3UTR TCA 90 bp | AGTGAATCCAGTCATCTGCCTGTGAGCACTGGGGTTGCTTCCTCTTTCACTGTCTTTCTCTTTCTAGTTTaGAGAAGTCCTCAGTACGAG | + |
|
Preference number: 4 (lower is better) Translates to: SESSHLPVSTGVASSFTVFLFLV*RSPQYE Trigger: CTCGTACTGAGGACTTCTTCAAACTAGAAAGAGAAA...GACAGTGAAAGAGGAAGCAACCCCAGTGCTCACAGGCAGATGACTGGATTCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS-3UTR TCA 90 bp | GCACTGTTAGCAGGGAATCCATTTGGTCAAGACCCACTCCCCATCAGTTTCCCTTTTCTCTTTCTAGTTTaGAGAAGTCCTCAGTACGAG | + |
|
Preference number: 4 (lower is better) Translates to: ALLAGNPFGQDPLPISFPFLFLV*RSPQYE Trigger: CTCGTACTGAGGACTTCTTCAAACTAGAAAGAGAAA...AGGGAAACTGATGGGGAGTGGGTCTTGACCAAATGGATTCCCTGCTAACAGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS-3UTR TCA 90 bp | GTTAGCAGGGAATCCATTTGGTCAAGACCCACTCCCCATCAGTTTCCCTCTCAGTCTTGCCAGTGCAGTTaGTGTTCATTTCTCTTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: VSRESIWSRPTPHQFPSQSCQCS*CSFLFL Trigger: TAGAAAGAGAAATGAACATCAACTGCACTGGCAAGA...CTGAGAGGGAAACTGATGGGGAGTGGGTCTTGACCAAATGGATTCCCTGCTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS-3UTR TCA 90 bp | TTAGCAGGGAATCCATTTGGTCAAGACCCACTCCCCATCAGTTTCCCTCTCAGACTCTTTATTTTCAGGTaGAGGGTCTTTTTCCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LAGNPFGQDPLPISFPLRLFIFR*RVFFQP Trigger: TGGCTGGAAAAAGACCCTTCACCTGAAAATAAAGAG...TCTGAGAGGGAAACTGATGGGGAGTGGGTCTTGACCAAATGGATTCCCTGCTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS-3UTR TCA 90 bp | AGTGAATCCAGTCATCTGCCTGTGAGCACTGGGGTTGCTTCCTCTTTCACTGTCATAAATCCCAGGGAATaGTTCTCCGGCATATTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SESSHLPVSTGVASSFTVINPRE*FSGIFV Trigger: AACAAATATGCCGGAGAATCATTCCCTGGGATTTAT...GACAGTGAAAGAGGAAGCAACCCCAGTGCTCACAGGCAGATGACTGGATTCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS-3UTR GCA 90 bp | GCACTGTTAGCAGGGAATCCATTTGGTCAAGACCCACTCCCCATCAGTTTCCCTGATCTTCCCATATCTTaGGATAACAATCTTGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ALLAGNPFGQDPLPISFPDLPIS*DNNLAS Trigger: ACTGGCAAGATTGTTATCGCAAGATATGGGAAGATC...AGGGAAACTGATGGGGAGTGGGTCTTGACCAAATGGATTCCCTGCTAACAGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS-3UTR GCA 90 bp | ATCCAGTCATCTGCCTGTGAGCACTGGGGTTGCTTCCTCTTTCACTGTCACTTCGATCTTCCCATATCTTaGGATAACAATCTTGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: IQSSACEHWGCFLFHCHFDLPIS*DNNLAS Trigger: ACTGGCAAGATTGTTATCGCAAGATATGGGAAGATC...GAAGTGACAGTGAAAGAGGAAGCAACCCCAGTGCTCACAGGCAGATGACTGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS-3UTR GCA 90 bp | AGCAGCACTGTTAGCAGGGAATCCATTTGGTCAAGACCCACTCCCCATCAGTTTGCATGGTTTCTCAATTaGTGGTCGTGTTTCTTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SSTVSRESIWSRPTPHQFAWFLN*WSCFLD Trigger: ATCCAAGAAACACGACCAGCAATTGAGAAACCATGC...AAACTGATGGGGAGTGGGTCTTGACCAAATGGATTCCCTGCTAACAGTGCTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS-3UTR GCA 90 bp | CTGTCTCATGTACATCGTAAGGGGGTTCAGCAAGCTTTGTGTTTGTCTAACACTATGTTTCTTCACTTCTaGCCAGGCCAAGGAAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LSHVHRKGVQQALCLSNTMFLHF*PGQGRV Trigger: GACCCTTCCTTGGCCTGGGCAGAAGTGAAGAAACAT...AGTGTTAGACAAACACAAAGCTTGCTGAACCCCCTTACGATGTACATGAGACAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172171.8 |
||
| CDS-3UTR CCA 90 bp | CCCACCCCCTCCTTTGCCACTAGGAACATTGCAGCCTATGGCTTATTAACTATATCCGTTCCTGCCAGATaGGGAAGTTTTGTAAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PTPSFATRNIAAYGLLTISVPAR*GSFVKE Trigger: TTCCTTTACAAAACTTCCCCATCTGGCAGGAACGGA...TATAGTTAATAAGCCATAGGCTGCAATGTTCCTAGTGGCAAAGGAGGGGGTGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172171.8 |
||
| CDS-3UTR CCA 90 bp | GTTAGCAGGGAATCCATTTGGTCAAGACCCACTCCCCATCAGTTTCCCTCTCAGCATGCTCATCCACAATaGATACATAGTTTGCATTGG | + |
|
Preference number: 4 (lower is better) Translates to: VSRESIWSRPTPHQFPSQHAHPQ*IHSLHW Trigger: CCAATGCAAACTATGTATCCATTGTGGATGAGCATG...CTGAGAGGGAAACTGATGGGGAGTGGGTCTTGACCAAATGGATTCCCTGCTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS-3UTR CCA 90 bp | CATCAGTTTCCCTCTCAGACACCACGCAATATTTTTCCATTGATGAAGCTACTCTTTAGCTGGATAGCCTaGAGTGAGTGGGTCACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HQFPSQTPRNIFPLMKLLFSWIA*SEWVTC Trigger: GCAGGTGACCCACTCACTCCAGGCTATCCAGCTAAA...GAGTAGCTTCATCAATGGAAAAATATTGCGTGGTGTCTGAGAGGGAAACTGATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS-3UTR CCA 90 bp | AGCAGCACTGTTAGCAGGGAATCCATTTGGTCAAGACCCACTCCCCATCAGTTTATGTACAGGTATGTTTaGAATCCCCACTGCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSTVSRESIWSRPTPHQFMYRYV*NPHCFF Trigger: GAAGAAGCAGTGGGGATTCCAAACATACCTGTACAT...AAACTGATGGGGAGTGGGTCTTGACCAAATGGATTCCCTGCTAACAGTGCTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS-3UTR CCA 90 bp | CATCAGTTTCCCTCTCAGACACCACGCAATATTTTTCCATTGATGAAGCTACTCCCAGCTTTTGTCTGGTaGAGCAGCTCCTCCCAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: HQFPSQTPRNIFPLMKLLPAFVW*SSSSQV Trigger: AACTTGGGAGGAGCTGCTCCACCAGACAAAAGCTGG...GAGTAGCTTCATCAATGGAAAAATATTGCGTGGTGTCTGAGAGGGAAACTGATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
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| CDS-3UTR CCA 90 bp | ATTTGGTCAAGACCCACTCCCCATCAGTTTCCCTCTCAGACACCACGCAATATTAACCATCATCAGGACTaGAGATCTCTCTTGCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: IWSRPTPHQFPSQTPRNINHHQD*RSLLPL Trigger: AAGTGGCAAGAGAGATCTCCAGTCCTGATGATGGTT...AATATTGCGTGGTGTCTGAGAGGGAAACTGATGGGGAGTGGGTCTTGACCAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS-3UTR CCA 90 bp | CCTTGTCCTTGTCTTTCTGACCTGTCTCATGTACATCGTAAGGGGGTTCAGCAAAACCATCATCAGGACTaGAGATCTCTCTTGCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: PCPCLSDLSHVHRKGVQQNHHQD*RSLLPL Trigger: AAGTGGCAAGAGAGATCTCCAGTCCTGATGATGGTT...TTGCTGAACCCCCTTACGATGTACATGAGACAGGTCAGAAAGACAAGGACAAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172171.8 |
||
| CDS-3UTR TCA 90 bp | ACTGTTAGCAGGGAATCCATTTGGTCAAGACCCACTCCCCATCAGTTTCCCTCTTTTCTCTTTCTAGTTTaGAGAAGTCCTCAGTACGAG | + |
|
Preference number: 4 (lower is better) Translates to: TVSRESIWSRPTPHQFPSFLFLV*RSPQYE Trigger: CTCGTACTGAGGACTTCTTCAAACTAGAAAGAGAAA...AGAGGGAAACTGATGGGGAGTGGGTCTTGACCAAATGGATTCCCTGCTAACAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS-3UTR TCA 90 bp | TTAGCAGGGAATCCATTTGGTCAAGACCCACTCCCCATCAGTTTCCCTCTCAGATCTTGCCAGTGCAGTTaGTGTTCATTTCTCTTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: LAGNPFGQDPLPISFPLRSCQCS*CSFLFL Trigger: TAGAAAGAGAAATGAACATCAACTGCACTGGCAAGA...TCTGAGAGGGAAACTGATGGGGAGTGGGTCTTGACCAAATGGATTCCCTGCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS-3UTR TCA 90 bp | GTTAGCAGGGAATCCATTTGGTCAAGACCCACTCCCCATCAGTTTCCCTCTCAGTTCTATAGCAGAATCTaGGTTGATGTAAGCAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: VSRESIWSRPTPHQFPSQFYSRI*VDVSNA Trigger: AGCATTGCTTACATCAACTCAGATTCTGCTATAGAA...CTGAGAGGGAAACTGATGGGGAGTGGGTCTTGACCAAATGGATTCCCTGCTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS-3UTR TCA 90 bp | AGTGGCCTTGTCCTTGTCTTTCTGACCTGTCTCATGTACATCGTAAGGGGGTTCAACCAAGAGGATCTATaGATGCTCTTTCAAGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SGLVLVFLTCLMYIVRGFNQEDL*MLFQEA Trigger: TGCTTCTTGAAAGAGCATTCATAGATCCTCTTGGTT...GAACCCCCTTACGATGTACATGAGACAGGTCAGAAAGACAAGGACAAGGCCACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172171.8 |
||
| CDS-3UTR GCA 90 bp | AGCAGCACTGTTAGCAGGGAATCCATTTGGTCAAGACCCACTCCCCATCAGTTTGATCTTCCCATATCTTaGGATAACAATCTTGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SSTVSRESIWSRPTPHQFDLPIS*DNNLAS Trigger: ACTGGCAAGATTGTTATCGCAAGATATGGGAAGATC...AAACTGATGGGGAGTGGGTCTTGACCAAATGGATTCCCTGCTAACAGTGCTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS-3UTR GCA 90 bp | CTGTCTCATGTACATCGTAAGGGGGTTCAGCAAGCTTTGTGTTTGTCTAACACTAATCTCTTGCAAAACTaGTGTCCCAGTGGTAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LSHVHRKGVQQALCLSNTNLLQN*CPSGRV Trigger: GACCCTACCACTGGGACAGCAGTTTTGCAAGAGATT...AGTGTTAGACAAACACAAAGCTTGCTGAACCCCCTTACGATGTACATGAGACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172171.8 |
||
| CDS-3UTR GCA 90 bp | CATCAGTTTCCCTCTCAGACACCACGCAATATTTTTCCATTGATGAAGCTACTCCAGCCCAAACTCCTCTaGATCCCAGCTGGCAAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: HQFPSQTPRNIFPLMKLLQPKLL*IPAGKN Trigger: ATTTTTGCCAGCTGGGATGCAGAGGAGTTTGGGCTG...GAGTAGCTTCATCAATGGAAAAATATTGCGTGGTGTCTGAGAGGGAAACTGATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS-3UTR GCA 90 bp | CCTTGTCCTTGTCTTTCTGACCTGTCTCATGTACATCGTAAGGGGGTTCAGCAAGCATGGTTTCTCAATTaGTGGTCGTGTTTCTTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: PCPCLSDLSHVHRKGVQQAWFLN*WSCFLD Trigger: ATCCAAGAAACACGACCAGCAATTGAGAAACCATGC...TTGCTGAACCCCCTTACGATGTACATGAGACAGGTCAGAAAGACAAGGACAAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172171.8 |
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| CDS-3UTR GCA 90 bp | CATCAGTTTCCCTCTCAGACACCACGCAATATTTTTCCATTGATGAAGCTACTCATGTTTCTTCACTTCTaGCCAGGCCAAGGAAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: HQFPSQTPRNIFPLMKLLMFLHF*PGQGRV Trigger: GACCCTTCCTTGGCCTGGGCAGAAGTGAAGAAACAT...GAGTAGCTTCATCAATGGAAAAATATTGCGTGGTGTCTGAGAGGGAAACTGATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS-3UTR CCA 90 bp | AGTGAATCCAGTCATCTGCCTGTGAGCACTGGGGTTGCTTCCTCTTTCACTGTCTGCATTGGTCTCATTTaGATAAGACAAGAGAACATC | + |
|
Preference number: 4 (lower is better) Translates to: SESSHLPVSTGVASSFTVCIGLI*IRQENI Trigger: GATGTTCTCTTGTCTTATCCAAATGAGACCAATGCA...GACAGTGAAAGAGGAAGCAACCCCAGTGCTCACAGGCAGATGACTGGATTCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
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| CDS-3UTR CCA 90 bp | TTAGCAGGGAATCCATTTGGTCAAGACCCACTCCCCATCAGTTTCCCTCTCAGACATGCTCATCCACAATaGATACATAGTTTGCATTGG | + |
|
Preference number: 4 (lower is better) Translates to: LAGNPFGQDPLPISFPLRHAHPQ*IHSLHW Trigger: CCAATGCAAACTATGTATCCATTGTGGATGAGCATG...TCTGAGAGGGAAACTGATGGGGAGTGGGTCTTGACCAAATGGATTCCCTGCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS-3UTR CCA 90 bp | GTTAGCAGGGAATCCATTTGGTCAAGACCCACTCCCCATCAGTTTCCCTCTCAGTCAAGAAGCATCTGCTaGTCATTCATAATTCTCACT | + |
|
Preference number: 4 (lower is better) Translates to: VSRESIWSRPTPHQFPSQSRSIC*SFIILT Trigger: AGTGAGAATTATGAATGACCAGCAGATGCTTCTTGA...CTGAGAGGGAAACTGATGGGGAGTGGGTCTTGACCAAATGGATTCCCTGCTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS-3UTR TCA 90 bp | ACTGTTAGCAGGGAATCCATTTGGTCAAGACCCACTCCCCATCAGTTTCCCTCTTTCTATAGCAGAATCTaGGTTGATGTAAGCAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: TVSRESIWSRPTPHQFPSFYSRI*VDVSNA Trigger: AGCATTGCTTACATCAACTCAGATTCTGCTATAGAA...AGAGGGAAACTGATGGGGAGTGGGTCTTGACCAAATGGATTCCCTGCTAACAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS-3UTR TCA 90 bp | ATTTGGTCAAGACCCACTCCCCATCAGTTTCCCTCTCAGACACCACGCAATATTAACCAAGAGGATCTATaGATGCTCTTTCAAGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: IWSRPTPHQFPSQTPRNINQEDL*MLFQEA Trigger: TGCTTCTTGAAAGAGCATTCATAGATCCTCTTGGTT...AATATTGCGTGGTGTCTGAGAGGGAAACTGATGGGGAGTGGGTCTTGACCAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
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| CDS-3UTR TCA 90 bp | ATTTGGTCAAGACCCACTCCCCATCAGTTTCCCTCTCAGACACCACGCAATATTATAAATCCCAGGGAATaGTTCTCCGGCATATTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: IWSRPTPHQFPSQTPRNIINPRE*FSGIFV Trigger: AACAAATATGCCGGAGAATCATTCCCTGGGATTTAT...AATATTGCGTGGTGTCTGAGAGGGAAACTGATGGGGAGTGGGTCTTGACCAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
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| CDS-3UTR TCA 90 bp | CCTTGTCCTTGTCTTTCTGACCTGTCTCATGTACATCGTAAGGGGGTTCAGCAAATAAATCCCAGGGAATaGTTCTCCGGCATATTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: PCPCLSDLSHVHRKGVQQINPRE*FSGIFV Trigger: AACAAATATGCCGGAGAATCATTCCCTGGGATTTAT...TTGCTGAACCCCCTTACGATGTACATGAGACAGGTCAGAAAGACAAGGACAAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172171.8 |
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| CDS-3UTR CCA 90 bp | AGCAGCACTGTTAGCAGGGAATCCATTTGGTCAAGACCCACTCCCCATCAGTTTTCAAGAAGCATCTGCTaGTCATTCATAATTCTCACT | + |
|
Preference number: 4 (lower is better) Translates to: SSTVSRESIWSRPTPHQFSRSIC*SFIILT Trigger: AGTGAGAATTATGAATGACCAGCAGATGCTTCTTGA...AAACTGATGGGGAGTGGGTCTTGACCAAATGGATTCCCTGCTAACAGTGCTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
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| CDS-3UTR TCA 90 bp | CATCAGTTTCCCTCTCAGACACCACGCAATATTTTTCCATTGATGAAGCTACTCTGTGTAAGTCTTCTGTaGAAATCTGAAGCAGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HQFPSQTPRNIFPLMKLLCVSLL*KSEAAS Trigger: GGAGGCTGCTTCAGATTTTCACAGAAGACTTACACA...GAGTAGCTTCATCAATGGAAAAATATTGCGTGGTGTCTGAGAGGGAAACTGATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
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| CDS-3UTR GCA 90 bp | ATTTGGTCAAGACCCACTCCCCATCAGTTTCCCTCTCAGACACCACGCAATATTAAGAGGATCTATGAATaGTCTTTCAAGAAGCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: IWSRPTPHQFPSQTPRNIKRIYE*SFKKHL Trigger: CAGATGCTTCTTGAAAGAGCATTCATAGATCCTCTT...AATATTGCGTGGTGTCTGAGAGGGAAACTGATGGGGAGTGGGTCTTGACCAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
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| CDS-3UTR CCA 90 bp | ATTTGGTCAAGACCCACTCCCCATCAGTTTCCCTCTCAGACACCACGCAATATTTGCATTGGTCTCATTTaGATAAGACAAGAGAACATC | + |
|
Preference number: 4 (lower is better) Translates to: IWSRPTPHQFPSQTPRNICIGLI*IRQENI Trigger: GATGTTCTCTTGTCTTATCCAAATGAGACCAATGCA...AATATTGCGTGGTGTCTGAGAGGGAAACTGATGGGGAGTGGGTCTTGACCAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
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| 3UTR CAA 72 bp | CTGTCTCATGTACATCGTAAGGGGGTTCAGCAAGCTTaGTGTTTGTCTAACACTCCTCACTCATTAAATCAC | + |
|
Preference number: 4 (lower is better) Translates to: LSHVHRKGVQQA*CLSNTPHSLNH Trigger: GTGATTTAATGAGTGAGGAGTGTTAGACAAACACAAAGCTTGCTGAACCCCCTTACGATGTACATGAGACAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172171.8 |
||
| CDS-3UTR TCA 90 bp | CATCAGTTTCCCTCTCAGACACCACGCAATATTTTTCCATTGATGAAGCTACTCCTCTTTATTTTCAGGTaGAGGGTCTTTTTCCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: HQFPSQTPRNIFPLMKLLLFIFR*RVFFQP Trigger: TGGCTGGAAAAAGACCCTTCACCTGAAAATAAAGAG...GAGTAGCTTCATCAATGGAAAAATATTGCGTGGTGTCTGAGAGGGAAACTGATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
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| CDS-3UTR CCA 90 bp | CATCAGTTTCCCTCTCAGACACCACGCAATATTTTTCCATTGATGAAGCTACTCATGTACAGGTATGTTTaGAATCCCCACTGCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HQFPSQTPRNIFPLMKLLMYRYV*NPHCFF Trigger: GAAGAAGCAGTGGGGATTCCAAACATACCTGTACAT...GAGTAGCTTCATCAATGGAAAAATATTGCGTGGTGTCTGAGAGGGAAACTGATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
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| CDS-3UTR CCA 90 bp | CATCAGTTTCCCTCTCAGACACCACGCAATATTTTTCCATTGATGAAGCTACTCTCAAATGACACTGCATaGTTTCTCAATTGCTGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: HQFPSQTPRNIFPLMKLLSNDTA*FLNCWS Trigger: CGACCAGCAATTGAGAAACCATGCAGTGTCATTTGA...GAGTAGCTTCATCAATGGAAAAATATTGCGTGGTGTCTGAGAGGGAAACTGATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
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| CDS-3UTR TCA 90 bp | CTGTCTCATGTACATCGTAAGGGGGTTCAGCAAGCTTTGTGTTTGTCTAACACTTTCTATAGCAGAATCTaGGTTGATGTAAGCAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSHVHRKGVQQALCLSNTFYSRI*VDVSNA Trigger: AGCATTGCTTACATCAACTCAGATTCTGCTATAGAA...AGTGTTAGACAAACACAAAGCTTGCTGAACCCCCTTACGATGTACATGAGACAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172171.8 |
||
| CDS-3UTR CCA 90 bp | CATCAGTTTCCCTCTCAGACACCACGCAATATTTTTCCATTGATGAAGCTACTCCATGCTCATCCACAATaGATACATAGTTTGCATTGG | + |
|
Preference number: 4 (lower is better) Translates to: HQFPSQTPRNIFPLMKLLHAHPQ*IHSLHW Trigger: CCAATGCAAACTATGTATCCATTGTGGATGAGCATG...GAGTAGCTTCATCAATGGAAAAATATTGCGTGGTGTCTGAGAGGGAAACTGATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS-3UTR GCA 90 bp | CATCAGTTTCCCTCTCAGACACCACGCAATATTTTTCCATTGATGAAGCTACTCAAGAGGATCTATGAATaGTCTTTCAAGAAGCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: HQFPSQTPRNIFPLMKLLKRIYE*SFKKHL Trigger: CAGATGCTTCTTGAAAGAGCATTCATAGATCCTCTT...GAGTAGCTTCATCAATGGAAAAATATTGCGTGGTGTCTGAGAGGGAAACTGATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
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| CDS GCA 90 bp | GCCTTGCCATGCCTTTTTGGGTCAGGGAGTACCTCTGACTGCAACTaGAGGCCTGGGGGCTGCAATAGGAACGTTGTCGATGCCCTATCA | + |
|
Preference number: 5 (lower is better) Translates to: ALPCLFGSGSTSDCN*RPGGCNRNVVDALS Trigger: TGATAGGGCATCGACAACGTTCCTATTGCAGCCCCCAGGCCTGCAGTTGCAGTCAGAGGTACTCCCTGACCCAAAAAGGCATGGCAAGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000001826.15 ENSMUST00000101453.10 ENSMUST00000172116.8 ENSMUST00000172171.8 |
||
| CDS-3UTR CAA 90 bp | AGTGAATCCAGTCATCTGCCTGTGAGCACTGGGGTTGCTTCCTCTTTCACTGTCCTTCCCTTCCAGCTTTaGTCTGGTGGAGCAGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SESSHLPVSTGVASSFTVLPFQL*SGGAAP Trigger: AGGAGCTGCTCCACCAGACAAAAGCTGGAAGGGAAG...GACAGTGAAAGAGGAAGCAACCCCAGTGCTCACAGGCAGATGACTGGATTCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS-3UTR CAA 90 bp | ACTGTTAGCAGGGAATCCATTTGGTCAAGACCCACTCCCCATCAGTTTCCCTCTCCTTGCCATGCCTTTTaGGGTCAGGGAGTACCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: TVSRESIWSRPTPHQFPSPCHAF*GQGVPL Trigger: CAGAGGTACTCCCTGACCCAAAAAGGCATGGCAAGG...AGAGGGAAACTGATGGGGAGTGGGTCTTGACCAAATGGATTCCCTGCTAACAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001826.15 ENSMUST00000172171.8 |
||
| CDS-3UTR CAA 90 bp | ATCCAGTCATCTGCCTGTGAGCACTGGGGTTGCTTCCTCTTTCACTGTCACTTCGGAAGGTTCCATCCTTaGGGATATGGCTGCACATCA | + |
|
Preference number: 5 (lower is better) Translates to: IQSSACEHWGCFLFHCHFGRFHP*GYGCTS Trigger: TGATGTGCAGCCATATCCCAAAGGATGGAACCTTCC...GAAGTGACAGTGAAAGAGGAAGCAACCCCAGTGCTCACAGGCAGATGACTGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS-3UTR CAA 90 bp | TCTAAGTGGCCTTGTCCTTGTCTTTCTGACCTGTCTCATGTACATCGTAAGGGGCTTCCCTTCCAGCTTTaGTCTGGTGGAGCAGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SKWPCPCLSDLSHVHRKGLPFQL*SGGAAP Trigger: AGGAGCTGCTCCACCAGACAAAAGCTGGAAGGGAAG...CCCCTTACGATGTACATGAGACAGGTCAGAAAGACAAGGACAAGGCCACTTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172171.8 |
||
| CDS-3UTR CAA 90 bp | CCAGTGGTTCTCAACCTTCCTAATGGATCTCCTGAAGGACTCCCTTTCTTTTCTCCTTGCCATGCCTTTTaGGGTCAGGGAGTACCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PVVLNLPNGSPEGLPFFSPCHAF*GQGVPL Trigger: CAGAGGTACTCCCTGACCCAAAAAGGCATGGCAAGG...AGAAAAGAAAGGGAGTCCTTCAGGAGATCCATTAGGAAGGTTGAGAACCACTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172171.8 |
||
| CDS-3UTR CAA 90 bp | AGCAGCACTGTTAGCAGGGAATCCATTTGGTCAAGACCCACTCCCCATCAGTTTGGAAGGTTCCATCCTTaGGGATATGGCTGCACATCA | + |
|
Preference number: 5 (lower is better) Translates to: SSTVSRESIWSRPTPHQFGRFHP*GYGCTS Trigger: TGATGTGCAGCCATATCCCAAAGGATGGAACCTTCC...AAACTGATGGGGAGTGGGTCTTGACCAAATGGATTCCCTGCTAACAGTGCTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS-3UTR CAA 90 bp | AGTGGCCTTGTCCTTGTCTTTCTGACCTGTCTCATGTACATCGTAAGGGGGTTCGGAAGGTTCCATCCTTaGGGATATGGCTGCACATCA | + |
|
Preference number: 5 (lower is better) Translates to: SGLVLVFLTCLMYIVRGFGRFHP*GYGCTS Trigger: TGATGTGCAGCCATATCCCAAAGGATGGAACCTTCC...GAACCCCCTTACGATGTACATGAGACAGGTCAGAAAGACAAGGACAAGGCCACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172171.8 |
||
| CDS-3UTR CAA 90 bp | AGTGAATCCAGTCATCTGCCTGTGAGCACTGGGGTTGCTTCCTCTTTCACTGTCGACTGGAGATCTCTCTaGCCACTTTGTAAACCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: SESSHLPVSTGVASSFTVDWRSL*PLCKPA Trigger: AGCTGGTTTACAAAGTGGCAAGAGAGATCTCCAGTC...GACAGTGAAAGAGGAAGCAACCCCAGTGCTCACAGGCAGATGACTGGATTCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS-3UTR CAA 90 bp | ATCCAGTCATCTGCCTGTGAGCACTGGGGTTGCTTCCTCTTTCACTGTCACTTCCTGAGCCACAGACAGTaGCTTTTTAAATGTGGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: IQSSACEHWGCFLFHCHFLSHRQ*LFKCGV Trigger: GACCCCACATTTAAAAAGCAACTGTCTGTGGCTCAG...GAAGTGACAGTGAAAGAGGAAGCAACCCCAGTGCTCACAGGCAGATGACTGGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS-3UTR CAA 90 bp | ACTGTTAGCAGGGAATCCATTTGGTCAAGACCCACTCCCCATCAGTTTCCCTCTGACTGGAGATCTCTCTaGCCACTTTGTAAACCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: TVSRESIWSRPTPHQFPSDWRSL*PLCKPA Trigger: AGCTGGTTTACAAAGTGGCAAGAGAGATCTCCAGTC...AGAGGGAAACTGATGGGGAGTGGGTCTTGACCAAATGGATTCCCTGCTAACAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS-3UTR CAA 90 bp | TTAGCAGGGAATCCATTTGGTCAAGACCCACTCCCCATCAGTTTCCCTCTCAGACTGAGCCACAGACAGTaGCTTTTTAAATGTGGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LAGNPFGQDPLPISFPLRLSHRQ*LFKCGV Trigger: GACCCCACATTTAAAAAGCAACTGTCTGTGGCTCAG...TCTGAGAGGGAAACTGATGGGGAGTGGGTCTTGACCAAATGGATTCCCTGCTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS-3UTR CAA 90 bp | CATCAGTTTCCCTCTCAGACACCACGCAATATTTTTCCATTGATGAAGCTACTCCTTCCCTTCCAGCTTTaGTCTGGTGGAGCAGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: HQFPSQTPRNIFPLMKLLLPFQL*SGGAAP Trigger: AGGAGCTGCTCCACCAGACAAAAGCTGGAAGGGAAG...GAGTAGCTTCATCAATGGAAAAATATTGCGTGGTGTCTGAGAGGGAAACTGATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS-3UTR CAA 90 bp | AGTGAATCCAGTCATCTGCCTGTGAGCACTGGGGTTGCTTCCTCTTTCACTGTCATCTTGCCAGTGCAGTaGATGTTCATTTCTCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SESSHLPVSTGVASSFTVILPVQ*MFISLS Trigger: AGAAAGAGAAATGAACATCAACTGCACTGGCAAGAT...GACAGTGAAAGAGGAAGCAACCCCAGTGCTCACAGGCAGATGACTGGATTCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS-3UTR CAA 90 bp | ATCCAGTCATCTGCCTGTGAGCACTGGGGTTGCTTCCTCTTTCACTGTCACTTCATCTTGCCAGTGCAGTaGATGTTCATTTCTCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: IQSSACEHWGCFLFHCHFILPVQ*MFISLS Trigger: AGAAAGAGAAATGAACATCAACTGCACTGGCAAGAT...GAAGTGACAGTGAAAGAGGAAGCAACCCCAGTGCTCACAGGCAGATGACTGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS-3UTR CAA 90 bp | GTTAGCAGGGAATCCATTTGGTCAAGACCCACTCCCCATCAGTTTCCCTCTCAGGCTAGCATGGCATTTTaGACTTTGTTTCCTCTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: VSRESIWSRPTPHQFPSQASMAF*TLFPLK Trigger: CTTTAGAGGAAACAAAGTCAAAAATGCCATGCTAGC...CTGAGAGGGAAACTGATGGGGAGTGGGTCTTGACCAAATGGATTCCCTGCTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS-3UTR CAA 90 bp | GCACTGTTAGCAGGGAATCCATTTGGTCAAGACCCACTCCCCATCAGTTTCCCTGCTAGCATGGCATTTTaGACTTTGTTTCCTCTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: ALLAGNPFGQDPLPISFPASMAF*TLFPLK Trigger: CTTTAGAGGAAACAAAGTCAAAAATGCCATGCTAGC...AGGGAAACTGATGGGGAGTGGGTCTTGACCAAATGGATTCCCTGCTAACAGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS-3UTR CAA 90 bp | GCACTGTTAGCAGGGAATCCATTTGGTCAAGACCCACTCCCCATCAGTTTCCCTGAAGTAGTTGTTTCTTaGAGAGGCTTAATAAACCAG | + |
|
Preference number: 5 (lower is better) Translates to: ALLAGNPFGQDPLPISFPEVVVS*RGLINQ Trigger: CTGGTTTATTAAGCCTCTCAAAGAAACAACTACTTC...AGGGAAACTGATGGGGAGTGGGTCTTGACCAAATGGATTCCCTGCTAACAGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS-3UTR CAA 90 bp | ATCCAGTCATCTGCCTGTGAGCACTGGGGTTGCTTCCTCTTTCACTGTCACTTCGAAGTAGTTGTTTCTTaGAGAGGCTTAATAAACCAG | + |
|
Preference number: 5 (lower is better) Translates to: IQSSACEHWGCFLFHCHFEVVVS*RGLINQ Trigger: CTGGTTTATTAAGCCTCTCAAAGAAACAACTACTTC...GAAGTGACAGTGAAAGAGGAAGCAACCCCAGTGCTCACAGGCAGATGACTGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS-3UTR CAA 90 bp | ATCCAGTCATCTGCCTGTGAGCACTGGGGTTGCTTCCTCTTTCACTGTCACTTCTTGCATTGGTCTCATTaGGATAAGACAAGAGAACAT | + |
|
Preference number: 5 (lower is better) Translates to: IQSSACEHWGCFLFHCHFLHWSH*DKTREH Trigger: ATGTTCTCTTGTCTTATCCAAATGAGACCAATGCAA...GAAGTGACAGTGAAAGAGGAAGCAACCCCAGTGCTCACAGGCAGATGACTGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS-3UTR CAA 90 bp | GCACTGTTAGCAGGGAATCCATTTGGTCAAGACCCACTCCCCATCAGTTTCCCTATTTCTCTTTCTAGTTaGAAGAAGTCCTCAGTACGA | + |
|
Preference number: 5 (lower is better) Translates to: ALLAGNPFGQDPLPISFPISLSS*KKSSVR Trigger: TCGTACTGAGGACTTCTTCAAACTAGAAAGAGAAAT...AGGGAAACTGATGGGGAGTGGGTCTTGACCAAATGGATTCCCTGCTAACAGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS-3UTR CAA 90 bp | AGCAGCACTGTTAGCAGGGAATCCATTTGGTCAAGACCCACTCCCCATCAGTTTGCTAGCATGGCATTTTaGACTTTGTTTCCTCTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: SSTVSRESIWSRPTPHQFASMAF*TLFPLK Trigger: CTTTAGAGGAAACAAAGTCAAAAATGCCATGCTAGC...AAACTGATGGGGAGTGGGTCTTGACCAAATGGATTCCCTGCTAACAGTGCTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS-3UTR CAA 90 bp | ACTGTTAGCAGGGAATCCATTTGGTCAAGACCCACTCCCCATCAGTTTCCCTCTGGCTTTTGCATAGTCTaGAATGTTGAAAGGAATGAC | + |
|
Preference number: 5 (lower is better) Translates to: TVSRESIWSRPTPHQFPSGFCIV*NVERND Trigger: GTCATTCCTTTCAACATTCAAGACTATGCAAAAGCC...AGAGGGAAACTGATGGGGAGTGGGTCTTGACCAAATGGATTCCCTGCTAACAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS-3UTR CAA 90 bp | AGCAGCACTGTTAGCAGGGAATCCATTTGGTCAAGACCCACTCCCCATCAGTTTGGCTTTTGCATAGTCTaGAATGTTGAAAGGAATGAC | + |
|
Preference number: 5 (lower is better) Translates to: SSTVSRESIWSRPTPHQFGFCIV*NVERND Trigger: GTCATTCCTTTCAACATTCAAGACTATGCAAAAGCC...AAACTGATGGGGAGTGGGTCTTGACCAAATGGATTCCCTGCTAACAGTGCTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS-3UTR CAA 90 bp | GTTAGCAGGGAATCCATTTGGTCAAGACCCACTCCCCATCAGTTTCCCTCTCAGTGCTGGTCGTGTTTCTaGGATATGTTGAAAATACTT | + |
|
Preference number: 5 (lower is better) Translates to: VSRESIWSRPTPHQFPSQCWSCF*DMLKIL Trigger: AAGTATTTTCAACATATCCAAGAAACACGACCAGCA...CTGAGAGGGAAACTGATGGGGAGTGGGTCTTGACCAAATGGATTCCCTGCTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS-3UTR CAA 90 bp | AGCAGCACTGTTAGCAGGGAATCCATTTGGTCAAGACCCACTCCCCATCAGTTTTTGCATTGGTCTCATTaGGATAAGACAAGAGAACAT | + |
|
Preference number: 5 (lower is better) Translates to: SSTVSRESIWSRPTPHQFLHWSH*DKTREH Trigger: ATGTTCTCTTGTCTTATCCAAATGAGACCAATGCAA...AAACTGATGGGGAGTGGGTCTTGACCAAATGGATTCCCTGCTAACAGTGCTGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS-3UTR CAA 90 bp | AGTGGCCTTGTCCTTGTCTTTCTGACCTGTCTCATGTACATCGTAAGGGGGTTCTTGCATTGGTCTCATTaGGATAAGACAAGAGAACAT | + |
|
Preference number: 5 (lower is better) Translates to: SGLVLVFLTCLMYIVRGFLHWSH*DKTREH Trigger: ATGTTCTCTTGTCTTATCCAAATGAGACCAATGCAA...GAACCCCCTTACGATGTACATGAGACAGGTCAGAAAGACAAGGACAAGGCCACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172171.8 |
||
| CDS-3UTR CAA 90 bp | ACTGTTAGCAGGGAATCCATTTGGTCAAGACCCACTCCCCATCAGTTTCCCTCTTGCTGGTCGTGTTTCTaGGATATGTTGAAAATACTT | + |
|
Preference number: 5 (lower is better) Translates to: TVSRESIWSRPTPHQFPSCWSCF*DMLKIL Trigger: AAGTATTTTCAACATATCCAAGAAACACGACCAGCA...AGAGGGAAACTGATGGGGAGTGGGTCTTGACCAAATGGATTCCCTGCTAACAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS-3UTR CAA 90 bp | AGTGGCCTTGTCCTTGTCTTTCTGACCTGTCTCATGTACATCGTAAGGGGGTTCTGCTGGTCGTGTTTCTaGGATATGTTGAAAATACTT | + |
|
Preference number: 5 (lower is better) Translates to: SGLVLVFLTCLMYIVRGFCWSCF*DMLKIL Trigger: AAGTATTTTCAACATATCCAAGAAACACGACCAGCA...GAACCCCCTTACGATGTACATGAGACAGGTCAGAAAGACAAGGACAAGGCCACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172171.8 |
||
| CDS-3UTR CAA 90 bp | ATTTGGTCAAGACCCACTCCCCATCAGTTTCCCTCTCAGACACCACGCAATATTATTTCTCTTTCTAGTTaGAAGAAGTCCTCAGTACGA | + |
|
Preference number: 5 (lower is better) Translates to: IWSRPTPHQFPSQTPRNIISLSS*KKSSVR Trigger: TCGTACTGAGGACTTCTTCAAACTAGAAAGAGAAAT...AATATTGCGTGGTGTCTGAGAGGGAAACTGATGGGGAGTGGGTCTTGACCAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS-3UTR CAA 90 bp | TCTAAACCAGTGGTTCTCAACCTTCCTAATGGATCTCCTGAAGGACTCCCTTTCATCTTGCCAGTGCAGTaGATGTTCATTTCTCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SKPVVLNLPNGSPEGLPFILPVQ*MFISLS Trigger: AGAAAGAGAAATGAACATCAACTGCACTGGCAAGAT...GAAAGGGAGTCCTTCAGGAGATCCATTAGGAAGGTTGAGAACCACTGGTTTAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172171.8 |
||
| CDS-3UTR CAA 90 bp | CTTCTGGAATCTTTTGCTTGGTTATGCGTAGATAACACAGTTGTACAGTTCATGCTGAGCCACAGACAGTaGCTTTTTAAATGTGGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LLESFAWLCVDNTVVQFMLSHRQ*LFKCGV Trigger: GACCCCACATTTAAAAAGCAACTGTCTGTGGCTCAG...CATGAACTGTACAACTGTGTTATCTACGCATAACCAAGCAAAAGATTCCAGAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000172171.8 |
||
| CDS-3UTR CAA 90 bp | CATCAGTTTCCCTCTCAGACACCACGCAATATTTTTCCATTGATGAAGCTACTCGAAGTAGTTGTTTCTTaGAGAGGCTTAATAAACCAG | + |
|
Preference number: 5 (lower is better) Translates to: HQFPSQTPRNIFPLMKLLEVVVS*RGLINQ Trigger: CTGGTTTATTAAGCCTCTCAAAGAAACAACTACTTC...GAGTAGCTTCATCAATGGAAAAATATTGCGTGGTGTCTGAGAGGGAAACTGATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS GCA 90 bp | ATCATTATATCCAATAGGATGTACAGGTATGTTTGGAATCCCCACTaGTTCTTCAACAGGAAGTCTGAAGGTGTATTCTTTAGCTGGATA | + |
|
Preference number: 5 (lower is better) Translates to: IIISNRMYRYVWNPH*FFNRKSEGVFFSWI Trigger: TATCCAGCTAAAGAATACACCTTCAGACTTCCTGTTGAAGAAGCAGTGGGGATTCCAAACATACCTGTACATCCTATTGGATATAATGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS-3UTR CAA 90 bp | CTTCTGGAATCTTTTGCTTGGTTATGCGTAGATAACACAGTTGTACAGTTCATGGGCTTTTGCATAGTCTaGAATGTTGAAAGGAATGAC | + |
|
Preference number: 5 (lower is better) Translates to: LLESFAWLCVDNTVVQFMGFCIV*NVERND Trigger: GTCATTCCTTTCAACATTCAAGACTATGCAAAAGCC...CATGAACTGTACAACTGTGTTATCTACGCATAACCAAGCAAAAGATTCCAGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172171.8 |
||
| CDS TCA 90 bp | ACACTGCATGGTTTCTCAATTGCTGGTCGTGTTTCTTGGATATGTTaGAAATACTTGCTGCATAGTTTTTCAAGGCTTTTGCATAGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: TLHGFSIAGRVSWIC*KYLLHSFSRLLHSL Trigger: AAGACTATGCAAAAGCCTTGAAAAACTATGCAGCAAGTATTTTCAACATATCCAAGAAACACGACCAGCAATTGAGAAACCATGCAGTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS GCA 72 bp | AGCACCGCGGTAATGCACATTCCCAAGCCACGGAGATaGCTAGGCCTTGCCATGCCTTTTTGGGTCAGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: STAVMHIPKPRR*LGLAMPFWVRE Trigger: CTCCCTGACCCAAAAAGGCATGGCAAGGCCTAGGCATCTCCGTGGCTTGGGAATGTGCATTACCGCGGTGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000172116.8 ENSMUST00000172171.8 |
||
| CDS CAA 72 bp | CAAGCCACGGAGATGCCTAGGCCTTGCCATGCCTTTTaGGGTCAGGGAGTACCTCTGACTGCAACTGCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: QATEMPRPCHAF*GQGVPLTATAG Trigger: GCCTGCAGTTGCAGTCAGAGGTACTCCCTGACCCAAAAAGGCATGGCAAGGCCTAGGCATCTCCGTGGCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001826.15 ENSMUST00000101453.10 ENSMUST00000172116.8 ENSMUST00000172171.8 |
||
| CDS GCA 72 bp | TGCCTTTTTGGGTCAGGGAGTACCTCTGACTGCAACTaGAGGCCTGGGGGCTGCAATAGGAACGTTGTCGAT | + |
|
Preference number: 6 (lower is better) Translates to: CLFGSGSTSDCN*RPGGCNRNVVD Trigger: ATCGACAACGTTCCTATTGCAGCCCCCAGGCCTGCAGTTGCAGTCAGAGGTACTCCCTGACCCAAAAAGGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000001826.15 ENSMUST00000101453.10 ENSMUST00000172116.8 ENSMUST00000172171.8 |
||
| CDS GCA 72 bp | TTGCCATGCCTTTTTGGGTCAGGGAGTACCTCTGACTaGAACTGCAGGCCTGGGGGCTGCAATAGGAACGTT | + |
|
Preference number: 6 (lower is better) Translates to: LPCLFGSGSTSD*NCRPGGCNRNV Trigger: AACGTTCCTATTGCAGCCCCCAGGCCTGCAGTTGCAGTCAGAGGTACTCCCTGACCCAAAAAGGCATGGCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000001826.15 ENSMUST00000101453.10 ENSMUST00000172116.8 ENSMUST00000172171.8 |
||
| CDS TCA 72 bp | GACATACACAAGCTCTCCCTCCGGCATGCCGCTGGCTaGAAACGCATTGTATGGTGGTATGATGTTTGTAAC | + |
|
Preference number: 6 (lower is better) Translates to: DIHKLSLRHAAG*KRIVWWYDVCN Trigger: GTTACAAACATCATACCACCATACAATGCGTTTTCAGCCAGCGGCATGCCGGAGGGAGAGCTTGTGTATGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS GCA 72 bp | AAGTTTCCCAAAACTTCGCGCAATCTCTTGCAAAACTaGTGTCCCAGTGGTAGGGTCAATCCCTCCAAACAC | + |
|
Preference number: 6 (lower is better) Translates to: KFPKTSRNLLQN*CPSGRVNPSKH Trigger: GTGTTTGGAGGGATTGACCCTACCACTGGGACAGCAGTTTTGCAAGAGATTGCGCGAAGTTTTGGGAAACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS CCA 72 bp | TTCTTCAACAGGAAGTCTGAAGGTGTATTCTTTAGCTaGATAGCCTGGAGTGAGTGGGTCACCTGCCCCATT | + |
|
Preference number: 6 (lower is better) Translates to: FFNRKSEGVFFS*IAWSEWVTCPI Trigger: AATGGGGCAGGTGACCCACTCACTCCAGGCTATCCAGCTAAAGAATACACCTTCAGACTTCCTGTTGAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS TCA 72 bp | GAGTCTGCAAGCTCATATACCAATGCTCCTCGTAACTaGGCCACAGACAGTTGCTTTTTAAATGTGGGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: ESASSYTNAPRN*ATDSCFLNVGS Trigger: TGACCCCACATTTAAAAAGCAACTGTCTGTGGCTCAGTTACGAGGAGCATTGGTATATGAGCTTGCAGACTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS TCA 72 bp | TGTAGAACTTCCTCCCAGGTAAACCAAGAGGATCTATaGATGCTCTTTCAAGAAGCATCTGCTGGTCATTCA | + |
|
Preference number: 6 (lower is better) Translates to: CRTSSQVNQEDL*MLFQEASAGHS Trigger: TGAATGACCAGCAGATGCTTCTTGAAAGAGCATTCATAGATCCTCTTGGTTTACCTGGGAGGAAGTTCTACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS CAA 72 bp | TACTTTCAAAACCATCATCAGGACTGGAGATCTCTCTaGCCACTTTGTAAACCAGCTGGTTTAGAAGAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: YFQNHHQDWRSL*PLCKPAGLEEE Trigger: CTCCTCTTCTAAACCAGCTGGTTTACAAAGTGGCAAGAGAGATCTCCAGTCCTGATGATGGTTTTGAAAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS GCA 72 bp | TCCAATAGGATGTACAGGTATGTTTGGAATCCCCACTaGTTCTTCAACAGGAAGTCTGAAGGTGTATTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: SNRMYRYVWNPH*FFNRKSEGVFF Trigger: AAAGAATACACCTTCAGACTTCCTGTTGAAGAAGCAGTGGGGATTCCAAACATACCTGTACATCCTATTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS CCA 72 bp | TTCACAGCAGAAAATAAGGGATCAAATGACACTGCATaGTTTCTCAATTGCTGGTCGTGTTTCTTGGATATG | + |
|
Preference number: 6 (lower is better) Translates to: FTAENKGSNDTA*FLNCWSCFLDM Trigger: CATATCCAAGAAACACGACCAGCAATTGAGAAACCATGCAGTGTCATTTGATCCCTTATTTTCTGCTGTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS CAA 72 bp | ACTTGCTGCATAGTTTTTCAAGGCTTTTGCATAGTCTaGAATGTTGAAAGGAATGACCACAGAGTCTGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: TCCIVFQGFCIV*NVERNDHRVCK Trigger: CTTGCAGACTCTGTGGTCATTCCTTTCAACATTCAAGACTATGCAAAAGCCTTGAAAAACTATGCAGCAAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS CAA 90 bp | AAAGTGATTTACTTTCAAAACCATCATCAGGACTGGAGATCTCTCTaGCCACTTTGTAAACCAGCTGGTTTAGAAGAGGAGTACAATCAA | + |
|
Preference number: 6 (lower is better) Translates to: KVIYFQNHHQDWRSL*PLCKPAGLEEEYNQ Trigger: TTGATTGTACTCCTCTTCTAAACCAGCTGGTTTACAAAGTGGCAAGAGAGATCTCCAGTCCTGATGATGGTTTTGAAAGTAAATCACTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS CCA 72 bp | AAGGGATCAAATGACACTGCATGGTTTCTCAATTGCTaGTCGTGTTTCTTGGATATGTTGAAAATACTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: KGSNDTAWFLNC*SCFLDMLKILA Trigger: AGCAAGTATTTTCAACATATCCAAGAAACACGACCAGCAATTGAGAAACCATGCAGTGTCATTTGATCCCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS CAA 72 bp | CATCCACAATGGATACATAGTTTGCATTGGTCTCATTaGGATAAGACAAGAGAACATCGTAATGAACCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: HPQWIHSLHWSH*DKTREHRNEPG Trigger: ACCTGGTTCATTACGATGTTCTCTTGTCTTATCCAAATGAGACCAATGCAAACTATGTATCCATTGTGGATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
||
| CDS CCA 72 bp | ATCCACAATGGATACATAGTTTGCATTGGTCTCATTTaGATAAGACAAGAGAACATCGTAATGAACCAGGTT | + |
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Preference number: 6 (lower is better) Translates to: IHNGYIVCIGLI*IRQENIVMNQV Trigger: AACCTGGTTCATTACGATGTTCTCTTGTCTTATCCAAATGAGACCAATGCAAACTATGTATCCATTGTGGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
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| CDS GCA 72 bp | AATAAGGGATCAAATGACACTGCATGGTTTCTCAATTaGTGGTCGTGTTTCTTGGATATGTTGAAAATACTT | + |
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Preference number: 6 (lower is better) Translates to: NKGSNDTAWFLN*WSCFLDMLKIL Trigger: AAGTATTTTCAACATATCCAAGAAACACGACCAGCAATTGAGAAACCATGCAGTGTCATTTGATCCCTTATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
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| CDS TCA 72 bp | ATAGGATTATTAAGATCAACTTGTGTAAGTCTTCTGTaGAAATCTGAAGCAGCCTCCGAAAAGTTTTTCACA | + |
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Preference number: 6 (lower is better) Translates to: IGLLRSTCVSLL*KSEAASEKFFT Trigger: TGTGAAAAACTTTTCGGAGGCTGCTTCAGATTTTCACAGAAGACTTACACAAGTTGATCTTAATAATCCTAT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001826.15 ENSMUST00000166825.8 ENSMUST00000172171.8 |
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