Pregenerated sensors for NAAA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029413Ensembl transcript IDs: ENSMUST00000113102.10, ENSMUST00000159345.8, ENSMUST00000175656.2
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGGACACCTGGTCAGTATATGATTTATGGTGGGCTATAGGGAGGTaGCACCCGGGAGGCGCCATCCTGCCAGATGGCCATTTGGTCCTG | + |
|
Preference number: 1 (lower is better) Translates to: QDTWSVYDLWWAIGR*HPGGAILPDGHLVL Trigger: CAGGACCAAATGGCCATCTGGCAGGATGGCGCCTCCCGGGTGGCACCTCCCTATAGCCCACCATAAATCATATACTGACCAGGTGTCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113102.10 |
||
| 3UTR TCA 90 bp | AAAGGCTTGGACTTCTCGAGGTCAGCAGGACACCTGGTCAGTATATaGTTTATGGTGGGCTATAGGGAGGTGCCACCCGGGAGGCGCCAT | + |
|
Preference number: 1 (lower is better) Translates to: KGLDFSRSAGHLVSI*FMVGYREVPPGRRH Trigger: ATGGCGCCTCCCGGGTGGCACCTCCCTATAGCCCACCATAAATCATATACTGACCAGGTGTCCTGCTGACCTCGAGAAGTCCAAGCCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113102.10 |
||
| 3UTR TCA 90 bp | ACAGCCATCTTGTCCTGTCCCTTCTTCAGTGGACAAGCAGGAGTGTaGACACAGAATCACAGGACACTTGTGACTGGTTGGGTGCAGCCT | + |
|
Preference number: 1 (lower is better) Translates to: TAILSCPFFSGQAGV*TQNHRTLVTGWVQP Trigger: AGGCTGCACCCAACCAGTCACAAGTGTCCTGTGATTCTGTGTTCACACTCCTGCTTGTCCACTGAAGAAGGGACAGGACAAGATGGCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113102.10 ENSMUST00000159345.8 |
||
| 3UTR TCA 90 bp | CAGAATCACAGGACACTTGTGACTGGTTGGGTGCAGCCTGACCTCTaGGACCAGTTATATGAGTTGTTCAAGCCAAGGTGGGCTGTTAGT | + |
|
Preference number: 1 (lower is better) Translates to: QNHRTLVTGWVQPDL*DQLYELFKPRWAVS Trigger: ACTAACAGCCCACCTTGGCTTGAACAACTCATATAACTGGTCTCAGAGGTCAGGCTGCACCCAACCAGTCACAAGTGTCCTGTGATTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113102.10 ENSMUST00000159345.8 |
||
| 3UTR TCA 90 bp | TCAGTGGACAAGCAGGAGTGTGAACACAGAATCACAGGACACTTGTaGCTGGTTGGGTGCAGCCTGACCTCTGAGACCAGTTATATGAGT | + |
|
Preference number: 1 (lower is better) Translates to: SVDKQECEHRITGHL*LVGCSLTSETSYMS Trigger: ACTCATATAACTGGTCTCAGAGGTCAGGCTGCACCCAACCAGTCACAAGTGTCCTGTGATTCTGTGTTCACACTCCTGCTTGTCCACTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113102.10 ENSMUST00000159345.8 |
||
| 3UTR CCA 90 bp | TGGGTTTGTCCACATGACAGCCATCTTGTCCTGTCCCTTCTTCAGTaGACAAGCAGGAGTGTGAACACAGAATCACAGGACACTTGTGAC | + |
|
Preference number: 1 (lower is better) Translates to: WVCPHDSHLVLSLLQ*TSRSVNTESQDTCD Trigger: GTCACAAGTGTCCTGTGATTCTGTGTTCACACTCCTGCTTGTCCACTGAAGAAGGGACAGGACAAGATGGCTGTCATGTGGACAAACCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113102.10 ENSMUST00000159345.8 |
||
| 3UTR-3UTR GCA 90 bp | CTGACCTCTGAGACCAGTTATATGAGTTGTTCAAGCCAAGGTGGGCTGTTAGTGTGTGGGGAGGGAGCCTaGGTTGCTCAGGAAACGGGA | + |
|
Preference number: 2 (lower is better) Translates to: LTSETSYMSCSSQGGLLVCGEGA*VAQETG Trigger: TCCCGTTTCCTGAGCAACGCAGGCTCCCTCCCCACA...CACTAACAGCCCACCTTGGCTTGAACAACTCATATAACTGGTCTCAGAGGTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113102.10 ENSMUST00000159345.8 |
||
| 3UTR-3UTR TCA 90 bp | TGGGTTTGTCCACATGACAGCCATCTTGTCCTGTCCCTTCTTCAGTGGACAAGCTGGTTGGGTGCAGCCTaGCCTCTGAGACCAGTTATA | + |
|
Preference number: 2 (lower is better) Translates to: WVCPHDSHLVLSLLQWTSWLGAA*PLRPVI Trigger: TATAACTGGTCTCAGAGGTCAGGCTGCACCCAACCA...GCTTGTCCACTGAAGAAGGGACAGGACAAGATGGCTGTCATGTGGACAAACCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113102.10 ENSMUST00000159345.8 |
||
| 3UTR CCA 72 bp | CTGCGCTCCTCTTCCTCCACAGGCAGAAACGCTCTGTaGGGAGGGAGCCTGCGTTGCTCAGGAAACGGGACA | + |
|
Preference number: 3 (lower is better) Translates to: LRSSSSTGRNAL*GGSLRCSGNGT Trigger: TGTCCCGTTTCCTGAGCAACGCAGGCTCCCTCCCCACAGAGCGTTTCTGCCTGTGGAGGAAGAGGAGCGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113102.10 ENSMUST00000159345.8 |
||
| 3UTR GCA 72 bp | CCTCCACAGGCAGAAACGCTCTGTGGGGAGGGAGCCTaGGTTGCTCAGGAAACGGGACAGTCCTTCCAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: PPQAETLCGEGA*VAQETGQSFQS Trigger: AGACTGGAAGGACTGTCCCGTTTCCTGAGCAACGCAGGCTCCCTCCCCACAGAGCGTTTCTGCCTGTGGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113102.10 ENSMUST00000159345.8 |
||
| 3UTR GCA 72 bp | TGGTCAGTATATGATTTATGGTGGGCTATAGGGAGGTaGCACCCGGGAGGCGCCATCCTGCCAGATGGCCAT | + |
|
Preference number: 3 (lower is better) Translates to: WSVYDLWWAIGR*HPGGAILPDGH Trigger: ATGGCCATCTGGCAGGATGGCGCCTCCCGGGTGGCACCTCCCTATAGCCCACCATAAATCATATACTGACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113102.10 |
||
| 3UTR CCA 72 bp | CACACAAACAACAAAAGAGCACTCAAGCCAGCATGCTaGGGTCGAAACTCATGCACTGCGCAGGGGGCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: HTNNKRALKPAC*GRNSCTAQGAG Trigger: CCCTGCCCCCTGCGCAGTGCATGAGTTTCGACCCCAGCATGCTGGCTTGAGTGCTCTTTTGTTGTTTGTGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113102.10 |
||
| 3UTR TCA 72 bp | GACTTCTCGAGGTCAGCAGGACACCTGGTCAGTATATaGTTTATGGTGGGCTATAGGGAGGTGCCACCCGGG | + |
|
Preference number: 3 (lower is better) Translates to: DFSRSAGHLVSI*FMVGYREVPPG Trigger: CCCGGGTGGCACCTCCCTATAGCCCACCATAAATCATATACTGACCAGGTGTCCTGCTGACCTCGAGAAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113102.10 |
||
| 3UTR TCA 72 bp | AAGCAGGAGTGTGAACACAGAATCACAGGACACTTGTaGCTGGTTGGGTGCAGCCTGACCTCTGAGACCAGT | + |
|
Preference number: 3 (lower is better) Translates to: KQECEHRITGHL*LVGCSLTSETS Trigger: ACTGGTCTCAGAGGTCAGGCTGCACCCAACCAGTCACAAGTGTCCTGTGATTCTGTGTTCACACTCCTGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113102.10 ENSMUST00000159345.8 |
||
| 3UTR TCA 72 bp | TCACCCAGCCTTAGGAGAAACCTGGGTTTGTCCACATaGCAGCCATCTTGTCCTGTCCCTTCTTCAGTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: SPSLRRNLGLST*QPSCPVPSSVD Trigger: GTCCACTGAAGAAGGGACAGGACAAGATGGCTGTCATGTGGACAAACCCAGGTTTCTCCTAAGGCTGGGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113102.10 ENSMUST00000159345.8 |
||
| 3UTR CCA 72 bp | AGCTACAGGGTGGATCTGGCTGTGCCTGGATCCGCCTaGGTCTATTCTTCAGCCCTGAATTTCTTGAGCTTA | + |
|
Preference number: 3 (lower is better) Translates to: SYRVDLAVPGSA*VYSSALNFLSL Trigger: TAAGCTCAAGAAATTCAGGGCTGAAGAATAGACCCAGGCGGATCCAGGCACAGCCAGATCCACCCTGTAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113102.10 |
||
| 3UTR-3UTR CAA 90 bp | AAACCAAAAAGGGAGGGAGCCGAAGGAATTTGCGAGGTTACACATGATTGGCTTCTGCCAGATGGCCATTaGGTCCTGATAGCCCTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: KPKREGAEGICEVTHDWLLPDGH*VLIALA Trigger: AGCCAGGGCTATCAGGACCAAATGGCCATCTGGCAG...AAGCCAATCATGTGTAACCTCGCAAATTCCTTCGGCTCCCTCCCTTTTTGGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113102.10 |
||
| 3UTR TCA 72 bp | AGGACACTTGTGACTGGTTGGGTGCAGCCTGACCTCTaGGACCAGTTATATGAGTTGTTCAAGCCAAGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: RTLVTGWVQPDL*DQLYELFKPRW Trigger: CCACCTTGGCTTGAACAACTCATATAACTGGTCTCAGAGGTCAGGCTGCACCCAACCAGTCACAAGTGTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113102.10 ENSMUST00000159345.8 |
||
| 3UTR CCA 72 bp | CCACATGACAGCCATCTTGTCCTGTCCCTTCTTCAGTaGACAAGCAGGAGTGTGAACACAGAATCACAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: PHDSHLVLSLLQ*TSRSVNTESQD Trigger: GTCCTGTGATTCTGTGTTCACACTCCTGCTTGTCCACTGAAGAAGGGACAGGACAAGATGGCTGTCATGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113102.10 ENSMUST00000159345.8 |
||
| 3UTR TCA 72 bp | TTGTCCTGTCCCTTCTTCAGTGGACAAGCAGGAGTGTaGACACAGAATCACAGGACACTTGTGACTGGTTGG | + |
|
Preference number: 3 (lower is better) Translates to: LSCPFFSGQAGV*TQNHRTLVTGW Trigger: CCAACCAGTCACAAGTGTCCTGTGATTCTGTGTTCACACTCCTGCTTGTCCACTGAAGAAGGGACAGGACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113102.10 ENSMUST00000159345.8 |
||
| 3UTR CCA 72 bp | ACAAAGGCTTGGACTTCTCGAGGTCAGCAGGACACCTaGTCAGTATATGATTTATGGTGGGCTATAGGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: TKAWTSRGQQDT*SVYDLWWAIGR Trigger: CCTCCCTATAGCCCACCATAAATCATATACTGACCAGGTGTCCTGCTGACCTCGAGAAGTCCAAGCCTTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113102.10 |
||
| 3UTR TCA 72 bp | AAGGGAGGGAGCCGAAGGAATTTGCGAGGTTACACATaGTTGGCTTATTTAAATGTCGGCGAGGTGATTACA | + |
|
Preference number: 3 (lower is better) Translates to: KGGSRRNLRGYT*LAYLNVGEVIT Trigger: TGTAATCACCTCGCCGACATTTAAATAAGCCAATCATGTGTAACCTCGCAAATTCCTTCGGCTCCCTCCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113102.10 |
||
| CDS-3UTR GCA 90 bp | TTCCTCCACAGGCAGAAACGCTCTGTGGGGAGGGAGCCTGCGTTGCTCAGGAAAAGCCAGGGCCAGGTGTaGCCCATGGCACGCGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: FLHRQKRSVGREPALLRKSQGQV*PMARGP Trigger: AGGGCCGCGTGCCATGGGGCACACCTGGCCCTGGCT...TTTCCTGAGCAACGCAGGCTCCCTCCCCACAGAGCGTTTCTGCCTGTGGAGGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113102.10 ENSMUST00000159345.8 |
||
| CDS-3UTR GCA 90 bp | CAAGGTGGGCTGTTAGTGAAGCTCAAGGGGACCAGGAAGTCAGGAGGACCAAGAATCGGCAGCCAGCGCTaGTCCGGGGCCGCGTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QGGLLVKLKGTRKSGGPRIGSQR*SGAASR Trigger: TCTGGACGCGGCCCCGGAGCAGCGCTGGCTGCCGAT...TCTTGGTCCTCCTGACTTCCTGGTCCCCTTGAGCTTCACTAACAGCCCACCTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113102.10 ENSMUST00000159345.8 |
||
| CDS-3UTR GCA 90 bp | ACCTGGGTTTGTCCACATGACAGCCATCTTGTCCTGTCCCTTCTTCAGTGGACAAGCCAGGGCCAGGTGTaGCCCATGGCACGCGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: TWVCPHDSHLVLSLLQWTSQGQV*PMARGP Trigger: AGGGCCGCGTGCCATGGGGCACACCTGGCCCTGGCT...TGTCCACTGAAGAAGGGACAGGACAAGATGGCTGTCATGTGGACAAACCCAGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113102.10 ENSMUST00000159345.8 |
||
| CDS-3UTR GCA 90 bp | ATCTATCTATCTATCGGTGCAAACCCTGCCACTAAGCCTCACCCAGCCTTAGGAATCGGCAGCCAGCGCTaGTCCGGGGCCGCGTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: IYLSIGANPATKPHPALGIGSQR*SGAASR Trigger: TCTGGACGCGGCCCCGGAGCAGCGCTGGCTGCCGAT...TCCTAAGGCTGGGTGAGGCTTAGTGGCAGGGTTTGCACCGATAGATAGATAGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113102.10 ENSMUST00000159345.8 |
||
| 3UTR CAA 72 bp | CACAGGCAGAAACGCTCTGTGGGGAGGGAGCCTGCGTaGCTCAGGAAACGGGACAGTCCTTCCAGTCTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: HRQKRSVGREPA*LRKRDSPSSLR Trigger: TCTAAGACTGGAAGGACTGTCCCGTTTCCTGAGCAACGCAGGCTCCCTCCCCACAGAGCGTTTCTGCCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113102.10 ENSMUST00000159345.8 |
||
| CDS-3UTR TCA 90 bp | TGGGTTTGTCCACATGACAGCCATCTTGTCCTGTCCCTTCTTCAGTGGACAAGCTCGTCGGTGAAGGGCTaGGGCAGGAAGCTCTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: WVCPHDSHLVLSLLQWTSSSVKG*GRKLST Trigger: GGTGGAGAGCTTCCTGCCTCAGCCCTTCACCGACGA...GCTTGTCCACTGAAGAAGGGACAGGACAAGATGGCTGTCATGTGGACAAACCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113102.10 ENSMUST00000159345.8 |
||
| CDS-3UTR TCA 90 bp | GTCCTGTCCCTTCTTCAGTGGACAAGCAGGAGTGTGAACACAGAATCACAGGACTCGTCGGTGAAGGGCTaGGGCAGGAAGCTCTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: VLSLLQWTSRSVNTESQDSSVKG*GRKLST Trigger: GGTGGAGAGCTTCCTGCCTCAGCCCTTCACCGACGA...GTCCTGTGATTCTGTGTTCACACTCCTGCTTGTCCACTGAAGAAGGGACAGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113102.10 ENSMUST00000159345.8 |
||
| CDS-3UTR TCA 90 bp | CCTCTTCCTCCACAGGCAGAAACGCTCTGTGGGGAGGGAGCCTGCGTTGCTCAGCAAAAGTGGTCCCAGTaGATGCAATCTGCCCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: PLPPQAETLCGEGACVAQQKWSQ*MQSAHS Trigger: AGAATGGGCAGATTGCATTCACTGGGACCACTTTTG...CTGAGCAACGCAGGCTCCCTCCCCACAGAGCGTTTCTGCCTGTGGAGGAAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113102.10 ENSMUST00000159345.8 |
||
| CDS-3UTR TCA 90 bp | TTCCTCCACAGGCAGAAACGCTCTGTGGGGAGGGAGCCTGCGTTGCTCAGGAAAAATAAACGTCAGCAATaGGGGGAGTCTTGGCCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: FLHRQKRSVGREPALLRKNKRQQ*GESWPA Trigger: CGCTGGCCAAGACTCCCCTCATTGCTGACGTTTATT...TTTCCTGAGCAACGCAGGCTCCCTCCCCACAGAGCGTTTCTGCCTGTGGAGGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000113102.10 ENSMUST00000159345.8 |
||
| CDS-3UTR CCA 90 bp | GGCTGCGCTCCTCTTCCTCCACAGGCAGAAACGCTCTGTGGGGAGGGAGCCTGCAATTGTAAACTTGTGTaGACTTTGGCCTGTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: GCAPLPPQAETLCGEGACNCKLV*TLACPQ Trigger: CTGTGGACAGGCCAAAGTCCACACAAGTTTACAATT...GCAGGCTCCCTCCCCACAGAGCGTTTCTGCCTGTGGAGGAAGAGGAGCGCAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113102.10 ENSMUST00000159345.8 |
||
| CDS-3UTR TCA 90 bp | AAGACAGCAGGCTGCGCTCCTCTTCCTCCACAGGCAGAAACGCTCTGTGGGGAGCAAAAGTGGTCCCAGTaGATGCAATCTGCCCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: KTAGCAPLPPQAETLCGEQKWSQ*MQSAHS Trigger: AGAATGGGCAGATTGCATTCACTGGGACCACTTTTG...CTCCCCACAGAGCGTTTCTGCCTGTGGAGGAAGAGGAGCGCAGCCTGCTGTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113102.10 ENSMUST00000159345.8 |
||
| CDS-3UTR GCA 90 bp | ACCTGGGTTTGTCCACATGACAGCCATCTTGTCCTGTCCCTTCTTCAGTGGACAAAGAGGCCAAATGTCTaGCGGGCCACCTCGGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: TWVCPHDSHLVLSLLQWTKRPNV*RATSVP Trigger: AGGGACCGAGGTGGCCCGGCAGACATTTGGCCTCTT...TGTCCACTGAAGAAGGGACAGGACAAGATGGCTGTCATGTGGACAAACCCAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113102.10 ENSMUST00000159345.8 |
||
| CDS-3UTR CCA 90 bp | AAGACAGCAGGCTGCGCTCCTCTTCCTCCACAGGCAGAAACGCTCTGTGGGGAGAACTTGTGTGGACTTTaGCCTGTCCACAGTCCTACA | + |
|
Preference number: 4 (lower is better) Translates to: KTAGCAPLPPQAETLCGENLCGL*PVHSPT Trigger: TGTAGGACTGTGGACAGGCCAAAGTCCACACAAGTT...CTCCCCACAGAGCGTTTCTGCCTGTGGAGGAAGAGGAGCGCAGCCTGCTGTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113102.10 ENSMUST00000159345.8 |
||
| CDS-3UTR GCA 90 bp | CAAGGTGGGCTGTTAGTGAAGCTCAAGGGGACCAGGAAGTCAGGAGGACCAAGAAATACTGGTGCAGAATaGGGAAGCCTCGTAGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QGGLLVKLKGTRKSGGPRNTGAE*GSLVGQ Trigger: CTGGCCTACGAGGCTTCCGCATTCTGCACCAGTATT...TCTTGGTCCTCCTGACTTCCTGGTCCCCTTGAGCTTCACTAACAGCCCACCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113102.10 ENSMUST00000159345.8 |
||
| CDS-3UTR CCA 90 bp | GGGTTTGTCCACATGACAGCCATCTTGTCCTGTCCCTTCTTCAGTGGACAAGCAGGTGCGCAAGAAGTCTaGGTCGTAGTGCCGCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: GFVHMTAILSCPFFSGQAGAQEV*VVVPQH Trigger: ATGCTGCGGCACTACGACCCAGACTTCTTGCGCACC...TGCTTGTCCACTGAAGAAGGGACAGGACAAGATGGCTGTCATGTGGACAAACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113102.10 ENSMUST00000159345.8 |
||
| CDS-3UTR TCA 90 bp | CAAGGTGGGCTGTTAGTGAAGCTCAAGGGGACCAGGAAGTCAGGAGGACCAAGAGTCTCCAGATTGAGGTaGGCTTGCCCTGTAGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: QGGLLVKLKGTRKSGGPRVSRLR*ACPVAF Trigger: AAATGCTACAGGGCAAGCTCACCTCAATCTGGAGAC...TCTTGGTCCTCCTGACTTCCTGGTCCCCTTGAGCTTCACTAACAGCCCACCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113102.10 ENSMUST00000159345.8 |
||
| CDS-3UTR CCA 90 bp | GGCAAAAACCACAAACCAAAAAGGGAGGGAGCCGAAGGAATTTGCGAGGTTACAGGTGCGCAAGAAGTCTaGGTCGTAGTGCCGCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: GKNHKPKREGAEGICEVTGAQEV*VVVPQH Trigger: ATGCTGCGGCACTACGACCCAGACTTCTTGCGCACC...TGTAACCTCGCAAATTCCTTCGGCTCCCTCCCTTTTTGGTTTGTGGTTTTTGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000113102.10 |
||
| CDS-3UTR CCA 90 bp | GCCTGGATCCGCCTGGGTCTATTCTTCAGCCCTGAATTTCTTGAGCTTAGATACTGGCCTTGGGAGTCTTaGGCCACAATACTGGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: AWIRLGLFFSPEFLELRYWPWES*ATILVQ Trigger: CTGCACCAGTATTGTGGCCCAAGACTCCCAAGGCCA...GTATCTAAGCTCAAGAAATTCAGGGCTGAAGAATAGACCCAGGCGGATCCAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113102.10 |
||
| CDS-3UTR TCA 90 bp | TGGGTTTGTCCACATGACAGCCATCTTGTCCTGTCCCTTCTTCAGTGGACAAGCTGCTTCGAAGCTTTCTaGCTCACTCAGGGTTTTGCG | + |
|
Preference number: 4 (lower is better) Translates to: WVCPHDSHLVLSLLQWTSCFEAF*LTQGFA Trigger: CGCAAAACCCTGAGTGAGTCAGAAAGCTTCGAAGCA...GCTTGTCCACTGAAGAAGGGACAGGACAAGATGGCTGTCATGTGGACAAACCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113102.10 ENSMUST00000159345.8 |
||
| CDS-3UTR TCA 90 bp | ATCTATCTATCTATCGGTGCAAACCCTGCCACTAAGCCTCACCCAGCCTTAGGAAATAAACGTCAGCAATaGGGGGAGTCTTGGCCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: IYLSIGANPATKPHPALGNKRQQ*GESWPA Trigger: CGCTGGCCAAGACTCCCCTCATTGCTGACGTTTATT...TCCTAAGGCTGGGTGAGGCTTAGTGGCAGGGTTTGCACCGATAGATAGATAGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113102.10 ENSMUST00000159345.8 |
||
| CDS-3UTR TCA 90 bp | CCTGTCCCTTCTTCAGTGGACAAGCAGGAGTGTGAACACAGAATCACAGGACACGTCTCCAGATTGAGGTaGGCTTGCCCTGTAGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: PVPSSVDKQECEHRITGHVSRLR*ACPVAF Trigger: AAATGCTACAGGGCAAGCTCACCTCAATCTGGAGAC...GTGTCCTGTGATTCTGTGTTCACACTCCTGCTTGTCCACTGAAGAAGGGACAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113102.10 ENSMUST00000159345.8 |
||
| CDS-3UTR CCA 90 bp | CAAGGTGGGCTGTTAGTGAAGCTCAAGGGGACCAGGAAGTCAGGAGGACCAAGAAACAGGGATAAAACCTaGAAGAGGGTCTCCAGATTG | + |
|
Preference number: 4 (lower is better) Translates to: QGGLLVKLKGTRKSGGPRNRDKT*KRVSRL Trigger: CAATCTGGAGACCCTCTTCCAGGTTTTATCCCTGTT...TCTTGGTCCTCCTGACTTCCTGGTCCCCTTGAGCTTCACTAACAGCCCACCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113102.10 ENSMUST00000159345.8 |
||
| CDS-3UTR CCA 90 bp | GGCAAAAACCACAAACCAAAAAGGGAGGGAGCCGAAGGAATTTGCGAGGTTACACTTGGGCCACAATACTaGTGCAGAATGCGGAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GKNHKPKREGAEGICEVTLGPQY*CRMRKP Trigger: AGGCTTCCGCATTCTGCACCAGTATTGTGGCCCAAG...TGTAACCTCGCAAATTCCTTCGGCTCCCTCCCTTTTTGGTTTGTGGTTTTTGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000113102.10 |
||
| CDS-3UTR CCA 90 bp | CTATCTATCATCTATCTATCTATCGGTGCAAACCCTGCCACTAAGCCTCACCCACTTGGGCCACAATACTaGTGCAGAATGCGGAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LSIIYLSIGANPATKPHPLGPQY*CRMRKP Trigger: AGGCTTCCGCATTCTGCACCAGTATTGTGGCCCAAG...TGGGTGAGGCTTAGTGGCAGGGTTTGCACCGATAGATAGATAGATGATAGATAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113102.10 ENSMUST00000159345.8 |
||
| CDS-3UTR CCA 90 bp | GTCCTGTCCCTTCTTCAGTGGACAAGCAGGAGTGTGAACACAGAATCACAGGACAACAGGGATAAAACCTaGAAGAGGGTCTCCAGATTG | + |
|
Preference number: 4 (lower is better) Translates to: VLSLLQWTSRSVNTESQDNRDKT*KRVSRL Trigger: CAATCTGGAGACCCTCTTCCAGGTTTTATCCCTGTT...GTCCTGTGATTCTGTGTTCACACTCCTGCTTGTCCACTGAAGAAGGGACAGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113102.10 ENSMUST00000159345.8 |
||
| CDS-3UTR GCA 90 bp | ATGATTGGCTTATTTAAATGTCGGCGAGGTGATTACAAATTAACAGGGCAGTACAAGAGGCCAAATGTCTaGCGGGCCACCTCGGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: MIGLFKCRRGDYKLTGQYKRPNV*RATSVP Trigger: AGGGACCGAGGTGGCCCGGCAGACATTTGGCCTCTT...GTACTGCCCTGTTAATTTGTAATCACCTCGCCGACATTTAAATAAGCCAATCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113102.10 |
||
| CDS-3UTR GCA 90 bp | ATCTATCTATCTATCGGTGCAAACCCTGCCACTAAGCCTCACCCAGCCTTAGGAAGTGGTCCCAGTGAATaGAATCTGCCCATTCTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: IYLSIGANPATKPHPALGSGPSE*NLPILY Trigger: ATAAAGAATGGGCAGATTGCATTCACTGGGACCACT...TCCTAAGGCTGGGTGAGGCTTAGTGGCAGGGTTTGCACCGATAGATAGATAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113102.10 ENSMUST00000159345.8 |
||
| CDS-3UTR CCA 90 bp | AAACCAAAAAGGGAGGGAGCCGAAGGAATTTGCGAGGTTACACATGATTGGCTTAACTTGTGTGGACTTTaGCCTGTCCACAGTCCTACA | + |
|
Preference number: 4 (lower is better) Translates to: KPKREGAEGICEVTHDWLNLCGL*PVHSPT Trigger: TGTAGGACTGTGGACAGGCCAAAGTCCACACAAGTT...AAGCCAATCATGTGTAACCTCGCAAATTCCTTCGGCTCCCTCCCTTTTTGGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113102.10 |
||
| CDS-3UTR CCA 90 bp | CTGACCTCTGAGACCAGTTATATGAGTTGTTCAAGCCAAGGTGGGCTGTTAGTGAATTGTAAACTTGTGTaGACTTTGGCCTGTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: LTSETSYMSCSSQGGLLVNCKLV*TLACPQ Trigger: CTGTGGACAGGCCAAAGTCCACACAAGTTTACAATT...CACTAACAGCCCACCTTGGCTTGAACAACTCATATAACTGGTCTCAGAGGTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113102.10 ENSMUST00000159345.8 |
||
| CDS CCA 90 bp | AACCCTGTCGCCAATGACCTGCGCCACCGCGGTGCGCAAGAAGTCTaGGTCGTAGTGCCGCAGCATCGGCAGCCAGCGCTGCTCCGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: NPVANDLRHRGAQEV*VVVPQHRQPALLRG Trigger: GCCCCGGAGCAGCGCTGGCTGCCGATGCTGCGGCACTACGACCCAGACTTCTTGCGCACCGCGGTGGCGCAGGTCATTGGCGACAGGGTT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113102.10 |
||
| CDS TCA 90 bp | TTTCTCCGACCATCCCGAGTACCCACTGGGGAACCCTGTCGCCAATaGCCTGCGCCACCGCGGTGCGCAAGAAGTCTGGGTCGTAGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: FLRPSRVPTGEPCRQ*PAPPRCARSLGRSA Trigger: GGCACTACGACCCAGACTTCTTGCGCACCGCGGTGGCGCAGGTCATTGGCGACAGGGTTCCCCAGTGGGTACTCGGGATGGTCGGAGAAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113102.10 |
||
| CDS-3UTR CAA 90 bp | CCTCTTCCTCCACAGGCAGAAACGCTCTGTGGGGAGGGAGCCTGCGTTGCTCAGGCGTCCAGACTGACGTaGAAGAGAGGCGGAGTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: PLPPQAETLCGEGACVAQASRLT*KRGGVP Trigger: CGGGACTCCGCCTCTCTTCAACGTCAGTCTGGACGC...CTGAGCAACGCAGGCTCCCTCCCCACAGAGCGTTTCTGCCTGTGGAGGAAGAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113102.10 ENSMUST00000159345.8 |
||
| CDS TCA 90 bp | ACACAATTTCTCCGACCATCCCGAGTACCCACTGGGGAACCCCAATaGCCTGCGCCACCGCGGTGCGCAAGAAGTCTGGGTCGTAGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: TQFLRPSRVPTGEPQ*PAPPRCARSLGRSA Trigger: GGCACTACGACCCAGACTTCTTGCGCACCGCGGTGGCGCAGGTCATTGGGGTTCCCCAGTGGGTACTCGGGATGGTCGGAGAAATTGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159345.8 |
||
| CDS-3UTR CAA 90 bp | AAGACAGCAGGCTGCGCTCCTCTTCCTCCACAGGCAGAAACGCTCTGTGGGGAGCTTCGGTCATCCACCTaGGGTGCAGGCTTCCAATGG | + |
|
Preference number: 5 (lower is better) Translates to: KTAGCAPLPPQAETLCGELRSST*GAGFQW Trigger: CCATTGGAAGCCTGCACCCAAGGTGGATGACCGAAG...CTCCCCACAGAGCGTTTCTGCCTGTGGAGGAAGAGGAGCGCAGCCTGCTGTCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113102.10 ENSMUST00000159345.8 |
||
| CDS-3UTR CAA 90 bp | CTCCTCTTCCTCCACAGGCAGAAACGCTCTGTGGGGAGGGAGCCTGCGTTGCTCAAACTTGTGTGGACTTaGGCCTGTCCACAGTCCTAC | + |
|
Preference number: 5 (lower is better) Translates to: LLFLHRQKRSVGREPALLKLVWT*ACPQSY Trigger: GTAGGACTGTGGACAGGCCAAAGTCCACACAAGTTT...GAGCAACGCAGGCTCCCTCCCCACAGAGCGTTTCTGCCTGTGGAGGAAGAGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113102.10 ENSMUST00000159345.8 |
||
| CDS TCA 90 bp | AGGTTGAGCGAGTCACAGATGCTGCGGATCTCGTCGGTGAAGGGCTaGGGCAGGAAGCTCTCCACCTTCGACACAATTTCTCCGACCATC | + |
|
Preference number: 5 (lower is better) Translates to: RLSESQMLRISSVKG*GRKLSTFDTISPTI Trigger: GATGGTCGGAGAAATTGTGTCGAAGGTGGAGAGCTTCCTGCCTCAGCCCTTCACCGACGAGATCCGCAGCATCTGTGACTCGCTCAACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113102.10 ENSMUST00000159345.8 |
||
| CDS-3UTR CAA 90 bp | CCTGTCCCTTCTTCAGTGGACAAGCAGGAGTGTGAACACAGAATCACAGGACACTCAGCCAGGCTGAGGTaGAGCGAGTCACAGATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PVPSSVDKQECEHRITGHSARLR*SESQML Trigger: CAGCATCTGTGACTCGCTCAACCTCAGCCTGGCTGA...GTGTCCTGTGATTCTGTGTTCACACTCCTGCTTGTCCACTGAAGAAGGGACAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113102.10 ENSMUST00000159345.8 |
||
| CDS-3UTR CAA 90 bp | CTCCTCTTCCTCCACAGGCAGAAACGCTCTGTGGGGAGGGAGCCTGCGTTGCTCTCCAATGGTCATAATTaGTCTCAACTCGGAACCACT | + |
|
Preference number: 5 (lower is better) Translates to: LLFLHRQKRSVGREPALLSNGHN*SQLGTT Trigger: AGTGGTTCCGAGTTGAGACAAATTATGACCATTGGA...GAGCAACGCAGGCTCCCTCCCCACAGAGCGTTTCTGCCTGTGGAGGAAGAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113102.10 ENSMUST00000159345.8 |
||
| CDS-3UTR CAA 90 bp | GAAACCTGGGTTTGTCCACATGACAGCCATCTTGTCCTGTCCCTTCTTCAGTGGCTTCGGTCATCCACCTaGGGTGCAGGCTTCCAATGG | + |
|
Preference number: 5 (lower is better) Translates to: ETWVCPHDSHLVLSLLQWLRSST*GAGFQW Trigger: CCATTGGAAGCCTGCACCCAAGGTGGATGACCGAAG...CCACTGAAGAAGGGACAGGACAAGATGGCTGTCATGTGGACAAACCCAGGTTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113102.10 ENSMUST00000159345.8 |
||
| CDS-3UTR CAA 90 bp | TATAAAGGCAAAAACCACAAACCAAAAAGGGAGGGAGCCGAAGGAATTTGCGAGGCGTCCAGACTGACGTaGAAGAGAGGCGGAGTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: YKGKNHKPKREGAEGICEASRLT*KRGGVP Trigger: CGGGACTCCGCCTCTCTTCAACGTCAGTCTGGACGC...CTCGCAAATTCCTTCGGCTCCCTCCCTTTTTGGTTTGTGGTTTTTGCCTTTATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000113102.10 |
||
| CDS-3UTR CAA 90 bp | AAACCAAAAAGGGAGGGAGCCGAAGGAATTTGCGAGGTTACACATGATTGGCTTTCAGCCAGGCTGAGGTaGAGCGAGTCACAGATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: KPKREGAEGICEVTHDWLSARLR*SESQML Trigger: CAGCATCTGTGACTCGCTCAACCTCAGCCTGGCTGA...AAGCCAATCATGTGTAACCTCGCAAATTCCTTCGGCTCCCTCCCTTTTTGGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113102.10 |
||
| CDS TCA 90 bp | ACAGGAAACAGGGATAAAACCTGGAAGAGGGTCTCCAGATTGAGGTaGGCTTGCCCTGTAGCATTTAGGGCTTTGATGGCTGGTGTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: TGNRDKTWKRVSRLR*ACPVAFRALMAGVL Trigger: AAGAACACCAGCCATCAAAGCCCTAAATGCTACAGGGCAAGCTCACCTCAATCTGGAGACCCTCTTCCAGGTTTTATCCCTGTTTCCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113102.10 ENSMUST00000159345.8 |
||
| CDS-3UTR CAA 90 bp | TATAAAGGCAAAAACCACAAACCAAAAAGGGAGGGAGCCGAAGGAATTTGCGAGATGGCCTTGGGAGTCTaGGGCCACAATACTGGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: YKGKNHKPKREGAEGICEMALGV*GHNTGA Trigger: TGCACCAGTATTGTGGCCCAAGACTCCCAAGGCCAT...CTCGCAAATTCCTTCGGCTCCCTCCCTTTTTGGTTTGTGGTTTTTGCCTTTATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000113102.10 |
||
| CDS-3UTR CAA 90 bp | CTGACCTCTGAGACCAGTTATATGAGTTGTTCAAGCCAAGGTGGGCTGTTAGTGAAACTTGTGTGGACTTaGGCCTGTCCACAGTCCTAC | + |
|
Preference number: 5 (lower is better) Translates to: LTSETSYMSCSSQGGLLVKLVWT*ACPQSY Trigger: GTAGGACTGTGGACAGGCCAAAGTCCACACAAGTTT...CACTAACAGCCCACCTTGGCTTGAACAACTCATATAACTGGTCTCAGAGGTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113102.10 ENSMUST00000159345.8 |
||
| CDS-3UTR CAA 90 bp | ACCTGGGTTTGTCCACATGACAGCCATCTTGTCCTGTCCCTTCTTCAGTGGACACCAGAAATTGTAAACTaGTGTGGACTTTGGCCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: TWVCPHDSHLVLSLLQWTPEIVN*CGLWPV Trigger: GACAGGCCAAAGTCCACACAAGTTTACAATTTCTGG...TGTCCACTGAAGAAGGGACAGGACAAGATGGCTGTCATGTGGACAAACCCAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113102.10 ENSMUST00000159345.8 |
||
| CDS-3UTR CAA 90 bp | ATCTATCTATCTATCGGTGCAAACCCTGCCACTAAGCCTCACCCAGCCTTAGGACCAGAAATTGTAAACTaGTGTGGACTTTGGCCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: IYLSIGANPATKPHPALGPEIVN*CGLWPV Trigger: GACAGGCCAAAGTCCACACAAGTTTACAATTTCTGG...TCCTAAGGCTGGGTGAGGCTTAGTGGCAGGGTTTGCACCGATAGATAGATAGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113102.10 ENSMUST00000159345.8 |
||
| CDS-3UTR CAA 90 bp | ACCTGGGTTTGTCCACATGACAGCCATCTTGTCCTGTCCCTTCTTCAGTGGACATCCAATGGTCATAATTaGTCTCAACTCGGAACCACT | + |
|
Preference number: 5 (lower is better) Translates to: TWVCPHDSHLVLSLLQWTSNGHN*SQLGTT Trigger: AGTGGTTCCGAGTTGAGACAAATTATGACCATTGGA...TGTCCACTGAAGAAGGGACAGGACAAGATGGCTGTCATGTGGACAAACCCAGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113102.10 ENSMUST00000159345.8 |
||
| CDS CCA 90 bp | CCACCAGCCTTTATCTCGTTCATCACCAGAAATTGTAAACTTGTGTaGACTTTGGCCTGTCCACAGTCCTACATAGCCAACAAAAGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: PPAFISFITRNCKLV*TLACPQSYIANKSG Trigger: ACCACTTTTGTTGGCTATGTAGGACTGTGGACAGGCCAAAGTCCACACAAGTTTACAATTTCTGGTGATGAACGAGATAAAGGCTGGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113102.10 ENSMUST00000159345.8 ENSMUST00000175656.2 |
||
| CDS CAA 90 bp | AGCATCGGCAGCCAGCGCTGCTCCGGGGCCGCGTCCAGACTGACGTaGAAGAGAGGCGGAGTCCCGGGGACGACAGCCGACAGCCAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: SIGSQRCSGAASRLT*KRGGVPGTTADSQG Trigger: TCCCTGGCTGTCGGCTGTCGTCCCCGGGACTCCGCCTCTCTTCAACGTCAGTCTGGACGCGGCCCCGGAGCAGCGCTGGCTGCCGATGCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113102.10 ENSMUST00000159345.8 |
||
| CDS CCA 72 bp | GCCAATGACCTGCGCCACCGCGGTGCGCAAGAAGTCTaGGTCGTAGTGCCGCAGCATCGGCAGCCAGCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: ANDLRHRGAQEV*VVVPQHRQPAL Trigger: CAGCGCTGGCTGCCGATGCTGCGGCACTACGACCCAGACTTCTTGCGCACCGCGGTGGCGCAGGTCATTGGC 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113102.10 |
||
| CDS CCA 72 bp | CCCAATGACCTGCGCCACCGCGGTGCGCAAGAAGTCTaGGTCGTAGTGCCGCAGCATCGGCAGCCAGCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: PNDLRHRGAQEV*VVVPQHRQPAL Trigger: CAGCGCTGGCTGCCGATGCTGCGGCACTACGACCCAGACTTCTTGCGCACCGCGGTGGCGCAGGTCATTGGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159345.8 |
||
| CDS GCA 72 bp | CCACTCTCCATTCAGAGGGTCAAGAGGCCAAATGTCTaGCGGGCCACCTCGGTCCCTGGTGATGACTACTCC | + |
|
Preference number: 6 (lower is better) Translates to: PLSIQRVKRPNV*RATSVPGDDYS Trigger: GGAGTAGTCATCACCAGGGACCGAGGTGGCCCGGCAGACATTTGGCCTCTTGACCCTCTGAATGGAGAGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113102.10 ENSMUST00000159345.8 ENSMUST00000175656.2 |
||
| CDS CAA 90 bp | AGGATAGTCCAGGTTCCGGCCGTGGTAAATATGGCCTTGGGAGTCTaGGGCCACAATACTGGTGCAGAATGCGGAAGCCTCGTAGGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: RIVQVPAVVNMALGV*GHNTGAECGSLVGQ Trigger: CTGGCCTACGAGGCTTCCGCATTCTGCACCAGTATTGTGGCCCAAGACTCCCAAGGCCATATTTACCACGGCCGGAACCTGGACTATCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113102.10 ENSMUST00000159345.8 |
||
| CDS GCA 72 bp | GCCTTGGGAGTCTTGGGCCACAATACTGGTGCAGAATaGGGAAGCCTCGTAGGCCAGGTTGACCAAGATACC | + |
|
Preference number: 6 (lower is better) Translates to: ALGVLGHNTGAE*GSLVGQVDQDT Trigger: GGTATCTTGGTCAACCTGGCCTACGAGGCTTCCGCATTCTGCACCAGTATTGTGGCCCAAGACTCCCAAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113102.10 ENSMUST00000159345.8 |
||
| CDS CAA 72 bp | CAGGTTCCGGCCGTGGTAAATATGGCCTTGGGAGTCTaGGGCCACAATACTGGTGCAGAATGCGGAAGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: QVPAVVNMALGV*GHNTGAECGSL Trigger: GAGGCTTCCGCATTCTGCACCAGTATTGTGGCCCAAGACTCCCAAGGCCATATTTACCACGGCCGGAACCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113102.10 ENSMUST00000159345.8 |
||
| CDS TCA 72 bp | GAGTCACAGATGCTGCGGATCTCGTCGGTGAAGGGCTaGGGCAGGAAGCTCTCCACCTTCGACACAATTTCT | + |
|
Preference number: 6 (lower is better) Translates to: ESQMLRISSVKG*GRKLSTFDTIS Trigger: AGAAATTGTGTCGAAGGTGGAGAGCTTCCTGCCTCAGCCCTTCACCGACGAGATCCGCAGCATCTGTGACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113102.10 ENSMUST00000159345.8 |
||
| CDS CAA 72 bp | AGGATAGTCCAGGTTCCGGCCGTGGTAAATATGGCCTaGGGAGTCTTGGGCCACAATACTGGTGCAGAATGC | + |
|
Preference number: 6 (lower is better) Translates to: RIVQVPAVVNMA*GVLGHNTGAEC Trigger: GCATTCTGCACCAGTATTGTGGCCCAAGACTCCCAAGGCCATATTTACCACGGCCGGAACCTGGACTATCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113102.10 ENSMUST00000159345.8 |
||
| CDS CAA 72 bp | ACAGCTGCTTCGAAGCTTTCTGACTCACTCAGGGTTTaGCGGATAAGCCAGCTGATGGGGGAGTGTCCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: TAASKLSDSLRV*RISQLMGECPR Trigger: TCTGGGACACTCCCCCATCAGCTGGCTTATCCGCAAAACCCTGAGTGAGTCAGAAAGCTTCGAAGCAGCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000113102.10 ENSMUST00000159345.8 ENSMUST00000175656.2 |
||
| CDS TCA 72 bp | CTTGGCCAGCGTGTAGACAGCTGCTTCGAAGCTTTCTaGCTCACTCAGGGTTTTGCGGATAAGCCAGCTGAT | + |
|
Preference number: 6 (lower is better) Translates to: LGQRVDSCFEAF*LTQGFADKPAD Trigger: ATCAGCTGGCTTATCCGCAAAACCCTGAGTGAGTCAGAAAGCTTCGAAGCAGCTGTCTACACGCTGGCCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113102.10 ENSMUST00000159345.8 ENSMUST00000175656.2 |
||
| CDS CAA 90 bp | TTTTCCAAAAGGATAGTCCAGGTTCCGGCCGTGGTAAATATGGCCTaGGGAGTCTTGGGCCACAATACTGGTGCAGAATGCGGAAGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: FSKRIVQVPAVVNMA*GVLGHNTGAECGSL Trigger: GAGGCTTCCGCATTCTGCACCAGTATTGTGGCCCAAGACTCCCAAGGCCATATTTACCACGGCCGGAACCTGGACTATCCTTTTGGAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113102.10 ENSMUST00000159345.8 |
||
| CDS CAA 90 bp | TTCTTCGGTCATCCACCTTGGGTGCAGGCTTCCAATGGTCATAATTaGTCTCAACTCGGAACCACTCTCCATTCAGAGGGTCAAGAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: FFGHPPWVQASNGHN*SQLGTTLHSEGQEA Trigger: GGCCTCTTGACCCTCTGAATGGAGAGTGGTTCCGAGTTGAGACAAATTATGACCATTGGAAGCCTGCACCCAAGGTGGATGACCGAAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113102.10 ENSMUST00000159345.8 ENSMUST00000175656.2 |
||
| CDS TCA 72 bp | AGGGATAAAACCTGGAAGAGGGTCTCCAGATTGAGGTaGGCTTGCCCTGTAGCATTTAGGGCTTTGATGGCT | + |
|
Preference number: 6 (lower is better) Translates to: RDKTWKRVSRLR*ACPVAFRALMA Trigger: AGCCATCAAAGCCCTAAATGCTACAGGGCAAGCTCACCTCAATCTGGAGACCCTCTTCCAGGTTTTATCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113102.10 ENSMUST00000159345.8 |
||
| CDS CAA 72 bp | CATCCACCTTGGGTGCAGGCTTCCAATGGTCATAATTaGTCTCAACTCGGAACCACTCTCCATTCAGAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: HPPWVQASNGHN*SQLGTTLHSEG Trigger: ACCCTCTGAATGGAGAGTGGTTCCGAGTTGAGACAAATTATGACCATTGGAAGCCTGCACCCAAGGTGGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113102.10 ENSMUST00000159345.8 ENSMUST00000175656.2 |
||
| CDS GCA 72 bp | TTTGATGGCTGGTGTTCTTCGGTCATCCACCTTGGGTaGAGGCTTCCAATGGTCATAATTTGTCTCAACTCG | + |
|
Preference number: 6 (lower is better) Translates to: FDGWCSSVIHLG*RLPMVIICLNS Trigger: CGAGTTGAGACAAATTATGACCATTGGAAGCCTGCACCCAAGGTGGATGACCGAAGAACACCAGCCATCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113102.10 ENSMUST00000159345.8 ENSMUST00000175656.2 |
||
| CDS CAA 90 bp | GCCTTTATCTCGTTCATCACCAGAAATTGTAAACTTGTGTGGACTTaGGCCTGTCCACAGTCCTACATAGCCAACAAAAGTGGTCCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: AFISFITRNCKLVWT*ACPQSYIANKSGPS Trigger: ACTGGGACCACTTTTGTTGGCTATGTAGGACTGTGGACAGGCCAAAGTCCACACAAGTTTACAATTTCTGGTGATGAACGAGATAAAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113102.10 ENSMUST00000159345.8 ENSMUST00000175656.2 |
||