Pregenerated sensors for NAA35 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021555Ensembl transcript IDs: ENSMUST00000022038.15, ENSMUST00000164011.8, ENSMUST00000165253.2, ENSMUST00000166923.9, ENSMUST00000168367.8, ENSMUST00000172166.8, ENSMUST00000172419.8
Found 159 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTAGACAGTTGTCACAGCACACCAGTGACAAGACCAGCAGAGGAATaGGCAGCAAATCAAGGATGGGGTCTCTTGCTGGTGGCCAAGAAC | + |
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Preference number: 1 (lower is better) Translates to: LDSCHSTPVTRPAEE*AANQGWGLLLVAKN Trigger: GTTCTTGGCCACCAGCAAGAGACCCCATCCTTGATTTGCTGCTCATTCCTCTGCTGGTCTTGTCACTGGTGTGCTGTGACAACTGTCTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
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| 3UTR CCA 90 bp | GCAAGCTGTCTGTCATTCAAGAGATCCACTTTCTGTCACCATGTGTaGCAGACTGATGTCTTCCCTAGAGTGGACACGGTCATCTTTGCA | + |
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Preference number: 1 (lower is better) Translates to: ASCLSFKRSTFCHHV*QTDVFPRVDTVIFA Trigger: TGCAAAGATGACCGTGTCCACTCTAGGGAAGACATCAGTCTGCCACACATGGTGACAGAAAGTGGATCTCTTGAATGACAGACAGCTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
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| 3UTR TCA 90 bp | ACTTTCCAACAAGACCTGAAACTCAGCGGCCTACAAACTCCTACCTaGTACCAGCAGCAGACACTGCAGTGTGATGTGGTTTTCCTTCAA | + |
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Preference number: 1 (lower is better) Translates to: TFQQDLKLSGLQTPT*YQQQTLQCDVVFLQ Trigger: TTGAAGGAAAACCACATCACACTGCAGTGTCTGCTGCTGGTATCAGGTAGGAGTTTGTAGGCCGCTGAGTTTCAGGTCTTGTTGGAAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
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| 3UTR CAA 90 bp | CTGCCCCTTCAGAGTACAAATGGGAAACCCCACGGGCTTAGACAGTaGTCACAGCACACCAGTGACAAGACCAGCAGAGGAATGAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: LPLQSTNGKPHGLRQ*SQHTSDKTSRGMSS Trigger: GCTGCTCATTCCTCTGCTGGTCTTGTCACTGGTGTGCTGTGACAACTGTCTAAGCCCGTGGGGTTTCCCATTTGTACTCTGAAGGGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
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| 3UTR-3UTR CCA 90 bp | AATGGGAAACCCCACGGGCTTAGACAGTTGTCACAGCACACCAGTGACAAGACCGCAGCAAATCAAGGATaGGGTCTCTTGCTGGTGGCC | + |
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Preference number: 2 (lower is better) Translates to: NGKPHGLRQLSQHTSDKTAANQG*GLLLVA Trigger: GGCCACCAGCAAGAGACCCCATCCTTGATTTGCTGC...GGTCTTGTCACTGGTGTGCTGTGACAACTGTCTAAGCCCGTGGGGTTTCCCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
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| 3UTR-3UTR TCA 90 bp | TTCAGAGTACAAATGGGAAACCCCACGGGCTTAGACAGTTGTCACAGCACACCAAGGGTAACTGAAGCCTaGCCCTGCAAGCCTCAGAGC | + |
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Preference number: 2 (lower is better) Translates to: FRVQMGNPTGLDSCHSTPRVTEA*PCKPQS Trigger: GCTCTGAGGCTTGCAGGGTCAGGCTTCAGTTACCCT...TGGTGTGCTGTGACAACTGTCTAAGCCCGTGGGGTTTCCCATTTGTACTCTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
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| 3UTR CAA 90 bp | GGTCTCTTGCTGGTGGCCAAGAACAAAACCTACACCTCAGGGCACTaGGGACTTCAGCTGGAACAAAGGGATGCACCACTTTCCAACAAG | + |
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Preference number: 2 (lower is better) Translates to: GLLLVAKNKTYTSGH*GLQLEQRDAPLSNK Trigger: CTTGTTGGAAAGTGGTGCATCCCTTTGTTCCAGCTGAAGTCCCAAGTGCCCTGAGGTGTAGGTTTTGTTCTTGGCCACCAGCAAGAGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
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| 3UTR-3UTR TCA 90 bp | TTCAGTGTTTCTAGGAAATGGAAGGTGCCACAGGGTTGGGCTGGCATAGCTCCGAGACCAGCAGAGGAATaGGCAGCAAATCAAGGATGG | + |
|
Preference number: 2 (lower is better) Translates to: FSVSRKWKVPQGWAGIAPRPAEE*AANQGW Trigger: CCATCCTTGATTTGCTGCTCATTCCTCTGCTGGTCT...CGGAGCTATGCCAGCCCAACCCTGTGGCACCTTCCATTTCCTAGAAACACTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
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| 3UTR-3UTR CCA 90 bp | AATGGGAAACCCCACGGGCTTAGACAGTTGTCACAGCACACCAGTGACAAGACCGATGGGGTCTCTTGCTaGTGGCCAAGAACAAAACCT | + |
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Preference number: 2 (lower is better) Translates to: NGKPHGLRQLSQHTSDKTDGVSC*WPRTKP Trigger: AGGTTTTGTTCTTGGCCACCAGCAAGAGACCCCATC...GGTCTTGTCACTGGTGTGCTGTGACAACTGTCTAAGCCCGTGGGGTTTCCCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
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| 3UTR-3UTR TCA 90 bp | GCATGCTTCAGTGTTTCTAGGAAATGGAAGGTGCCACAGGGTTGGGCTGGCATACTACAAACTCCTACCTaGTACCAGCAGCAGACACTG | + |
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Preference number: 2 (lower is better) Translates to: ACFSVSRKWKVPQGWAGILQTPT*YQQQTL Trigger: CAGTGTCTGCTGCTGGTATCAGGTAGGAGTTTGTAG...TATGCCAGCCCAACCCTGTGGCACCTTCCATTTCCTAGAAACACTGAAGCATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
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| 3UTR-3UTR TCA 90 bp | TGCTTCAGTGTTTCTAGGAAATGGAAGGTGCCACAGGGTTGGGCTGGCATAGCTACCACAAAGCCAGATTaGATTTCAGGGTGGCTCACT | + |
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Preference number: 2 (lower is better) Translates to: CFSVSRKWKVPQGWAGIATTKPD*ISGWLT Trigger: AGTGAGCCACCCTGAAATTCAATCTGGCTTTGTGGT...AGCTATGCCAGCCCAACCCTGTGGCACCTTCCATTTCCTAGAAACACTGAAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
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| 3UTR-3UTR CCA 90 bp | GACAAGACCAGCAGAGGAATGAGCAGCAAATCAAGGATGGGGTCTCTTGCTGGTTTCTGTCACCATGTGTaGCAGACTGATGTCTTCCCT | + |
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Preference number: 2 (lower is better) Translates to: DKTSRGMSSKSRMGSLAGFCHHV*QTDVFP Trigger: AGGGAAGACATCAGTCTGCCACACATGGTGACAGAA...ACCAGCAAGAGACCCCATCCTTGATTTGCTGCTCATTCCTCTGCTGGTCTTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
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| 3UTR-3UTR TCA 90 bp | TTCAGTGTTTCTAGGAAATGGAAGGTGCCACAGGGTTGGGCTGGCATAGCTCCGGTAAGGGTGGTAAACTaGAAAGTCTTCCTTGTAGCA | + |
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Preference number: 2 (lower is better) Translates to: FSVSRKWKVPQGWAGIAPVRVVN*KVFLVA Trigger: TGCTACAAGGAAGACTTTTCAGTTTACCACCCTTAC...CGGAGCTATGCCAGCCCAACCCTGTGGCACCTTCCATTTCCTAGAAACACTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
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| 3UTR-3UTR GCA 90 bp | TTCAGAGTACAAATGGGAAACCCCACGGGCTTAGACAGTTGTCACAGCACACCAAAGGATGGGGTCTCTTaGTGGTGGCCAAGAACAAAA | + |
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Preference number: 2 (lower is better) Translates to: FRVQMGNPTGLDSCHSTPKDGVS*WWPRTK Trigger: TTTTGTTCTTGGCCACCAGCAAGAGACCCCATCCTT...TGGTGTGCTGTGACAACTGTCTAAGCCCGTGGGGTTTCCCATTTGTACTCTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
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| 3UTR CAA 90 bp | AAGCCAAATGAACTAGCAATAGTCAGGCCAAACCACAAAGCCAGATaGAATTTCAGGGTGGCTCACTCTGCTAAAAGCACTGCCCCTTCA | + |
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Preference number: 2 (lower is better) Translates to: KPNELAIVRPNHKAR*NFRVAHSAKSTAPS Trigger: TGAAGGGGCAGTGCTTTTAGCAGAGTGAGCCACCCTGAAATTCAATCTGGCTTTGTGGTTTGGCCTGACTATTGCTAGTTCATTTGGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
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| 3UTR-3UTR CCA 90 bp | TCCACGAGGAAAGTGGTTTGTAACAGAGATCTTGAAAGAACACATGGTGACTGCCATAGCGAGGGAAGGTaGGTGGAAGTAATCTCTGGT | + |
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Preference number: 2 (lower is better) Translates to: STRKVVCNRDLERTHGDCHSEGR*VEVISG Trigger: ACCAGAGATTACTTCCACCCACCTTCCCTCGCTATG...GCAGTCACCATGTGTTCTTTCAAGATCTCTGTTACAAACCACTTTCCTCGTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164011.8 |
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| 3UTR-3UTR TCA 90 bp | TGCTTCAGTGTTTCTAGGAAATGGAAGGTGCCACAGGGTTGGGCTGGCATAGCTTTTCCTTCAACTGCATaGCTAAAGACCCTTAGAAAT | + |
|
Preference number: 2 (lower is better) Translates to: CFSVSRKWKVPQGWAGIAFPSTA*LKTLRN Trigger: ATTTCTAAGGGTCTTTAGTCATGCAGTTGAAGGAAA...AGCTATGCCAGCCCAACCCTGTGGCACCTTCCATTTCCTAGAAACACTGAAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
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| 3UTR-3UTR CCA 90 bp | AGCAGCAGACACTGCAGTGTGATGTGGTTTTCCTTCAACTGCATGACTAAAGACAGTTTTAGGGTTGTTTaGTGTTTAAGACACAATCTC | + |
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Preference number: 2 (lower is better) Translates to: SSRHCSVMWFSFNCMTKDSFRVV*CLRHNL Trigger: GAGATTGTGTCTTAAACACCAAACAACCCTAAAACT...GTCTTTAGTCATGCAGTTGAAGGAAAACCACATCACACTGCAGTGTCTGCTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
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| 3UTR-3UTR GCA 90 bp | TTATCCACGAGGAAAGTGGTTTGTAACAGAGATCTTGAAAGAACACATGGTGACTCTTTTAATTATTTTTaGATAGCGAGGGAAGGTGGG | + |
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Preference number: 2 (lower is better) Translates to: LSTRKVVCNRDLERTHGDSFNYF*IAREGG Trigger: CCCACCTTCCCTCGCTATGCAAAAATAATTAAAAGA...GTCACCATGTGTTCTTTCAAGATCTCTGTTACAAACCACTTTCCTCGTGGATAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164011.8 |
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| 3UTR GCA 72 bp | TGCAAGCCTCAGAGCTTGGGAGTAGAGGCTTACACCTaGAGACTCTGGGTAACGCTGGCACTGCCTGTTCGG | + |
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Preference number: 3 (lower is better) Translates to: CKPQSLGVEAYT*RLWVTLALPVR Trigger: CCGAACAGGCAGTGCCAGCGTTACCCAGAGTCTGCAGGTGTAAGCCTCTACTCCCAAGCTCTGAGGCTTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
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| 3UTR-3UTR CAA 90 bp | GGAAACCCCACGGGCTTAGACAGTTGTCACAGCACACCAGTGACAAGACCAGCATGCAAGCCTCAGAGCTaGGGAGTAGAGGCTTACACC | + |
|
Preference number: 3 (lower is better) Translates to: GNPTGLDSCHSTPVTRPACKPQS*GVEAYT Trigger: GGTGTAAGCCTCTACTCCCAAGCTCTGAGGCTTGCA...TGCTGGTCTTGTCACTGGTGTGCTGTGACAACTGTCTAAGCCCGTGGGGTTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
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| 3UTR CCA 72 bp | AAGTCCAGTCAGGCATGCTTCAGTGTTTCTAGGAAATaGAAGGTGCCACAGGGTTGGGCTGGCATAGCTCCG | + |
|
Preference number: 3 (lower is better) Translates to: KSSQACFSVSRK*KVPQGWAGIAP Trigger: CGGAGCTATGCCAGCCCAACCCTGTGGCACCTTCCATTTCCTAGAAACACTGAAGCATGCCTGACTGGACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
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| 3UTR-3UTR CAA 90 bp | TTCAGTGTTTCTAGGAAATGGAAGGTGCCACAGGGTTGGGCTGGCATAGCTCCGTACACCTCAGGGCACTaGGGACTTCAGCTGGAACAA | + |
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Preference number: 3 (lower is better) Translates to: FSVSRKWKVPQGWAGIAPYTSGH*GLQLEQ Trigger: TTGTTCCAGCTGAAGTCCCAAGTGCCCTGAGGTGTA...CGGAGCTATGCCAGCCCAACCCTGTGGCACCTTCCATTTCCTAGAAACACTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
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| 3UTR TCA 72 bp | TGTCACAGCACACCAGTGACAAGACCAGCAGAGGAATaGGCAGCAAATCAAGGATGGGGTCTCTTGCTGGTG | + |
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Preference number: 3 (lower is better) Translates to: CHSTPVTRPAEE*AANQGWGLLLV Trigger: CACCAGCAAGAGACCCCATCCTTGATTTGCTGCTCATTCCTCTGCTGGTCTTGTCACTGGTGTGCTGTGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
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| 3UTR TCA 72 bp | TGGGTTCTAAGATTCCAGGGTACCAATAGCCATGCATaGCAGCTGAGCCATACCACCTCCGTACTGACCAGG | + |
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Preference number: 3 (lower is better) Translates to: WVLRFQGTNSHA*QLSHTTSVLTR Trigger: CCTGGTCAGTACGGAGGTGGTATGGCTCAGCTGTCATGCATGGCTATTGGTACCCTGGAATCTTAGAACCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
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| 3UTR GCA 72 bp | CAGAGGAATGAGCAGCAAATCAAGGATGGGGTCTCTTaGTGGTGGCCAAGAACAAAACCTACACCTCAGGGC | + |
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Preference number: 3 (lower is better) Translates to: QRNEQQIKDGVS*WWPRTKPTPQG Trigger: GCCCTGAGGTGTAGGTTTTGTTCTTGGCCACCAGCAAGAGACCCCATCCTTGATTTGCTGCTCATTCCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
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| 3UTR CCA 72 bp | AGGAATGAGCAGCAAATCAAGGATGGGGTCTCTTGCTaGTGGCCAAGAACAAAACCTACACCTCAGGGCACT | + |
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Preference number: 3 (lower is better) Translates to: RNEQQIKDGVSC*WPRTKPTPQGT Trigger: AGTGCCCTGAGGTGTAGGTTTTGTTCTTGGCCACCAGCAAGAGACCCCATCCTTGATTTGCTGCTCATTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
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| 3UTR CCA 72 bp | CTGTCATTCAAGAGATCCACTTTCTGTCACCATGTGTaGCAGACTGATGTCTTCCCTAGAGTGGACACGGTC | + |
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Preference number: 3 (lower is better) Translates to: LSFKRSTFCHHV*QTDVFPRVDTV Trigger: GACCGTGTCCACTCTAGGGAAGACATCAGTCTGCCACACATGGTGACAGAAAGTGGATCTCTTGAATGACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
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| 3UTR GCA 72 bp | GCCTACAAACTCCTACCTGATACCAGCAGCAGACACTaGAGTGTGATGTGGTTTTCCTTCAACTGCATGACT | + |
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Preference number: 3 (lower is better) Translates to: AYKLLPDTSSRH*SVMWFSFNCMT Trigger: AGTCATGCAGTTGAAGGAAAACCACATCACACTGCAGTGTCTGCTGCTGGTATCAGGTAGGAGTTTGTAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
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| 3UTR-3UTR CAA 90 bp | TTATCCACGAGGAAAGTGGTTTGTAACAGAGATCTTGAAAGAACACATGGTGACGGATACAGTGTAAGTTaGGTAAGTTCACGACTTCAC | + |
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Preference number: 3 (lower is better) Translates to: LSTRKVVCNRDLERTHGDGYSVS*VSSRLH Trigger: GTGAAGTCGTGAACTTACCAAACTTACACTGTATCC...GTCACCATGTGTTCTTTCAAGATCTCTGTTACAAACCACTTTCCTCGTGGATAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164011.8 |
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| CDS-3UTR TCA 90 bp | GGAAACCCCACGGGCTTAGACAGTTGTCACAGCACACCAGTGACAAGACCAGCATTGGTAGTGCCATTCTaGGCCTGGATGCCGTGGTGC | + |
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Preference number: 4 (lower is better) Translates to: GNPTGLDSCHSTPVTRPALVVPF*AWMPWC Trigger: GCACCACGGCATCCAGGCTCAGAATGGCACTACCAA...TGCTGGTCTTGTCACTGGTGTGCTGTGACAACTGTCTAAGCCCGTGGGGTTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
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| CDS-3UTR TCA 90 bp | GGAAACCCCACGGGCTTAGACAGTTGTCACAGCACACCAGTGACAAGACCAGCAAGGCCTGGCTCATTGTaGTCTCTCGGCTCAACGGAC | + |
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Preference number: 4 (lower is better) Translates to: GNPTGLDSCHSTPVTRPARPGSL*SLGSTD Trigger: GTCCGTTGAGCCGAGAGATCACAATGAGCCAGGCCT...TGCTGGTCTTGTCACTGGTGTGCTGTGACAACTGTCTAAGCCCGTGGGGTTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
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| CDS-3UTR CCA 90 bp | GGAAACCCCACGGGCTTAGACAGTTGTCACAGCACACCAGTGACAAGACCAGCACTGCAGGTAGTGCACTaGTGGCGGCGTCATCACACT | + |
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Preference number: 4 (lower is better) Translates to: GNPTGLDSCHSTPVTRPALQVVH*WRRHHT Trigger: AGTGTGATGACGCCGCCACCAGTGCACTACCTGCAG...TGCTGGTCTTGTCACTGGTGTGCTGTGACAACTGTCTAAGCCCGTGGGGTTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
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| CDS-3UTR CCA 90 bp | GGAAACCCCACGGGCTTAGACAGTTGTCACAGCACACCAGTGACAAGACCAGCACAGGTAGTGCACTGGTaGCGGCGTCATCACACTGTT | + |
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Preference number: 4 (lower is better) Translates to: GNPTGLDSCHSTPVTRPAQVVHW*RRHHTV Trigger: AACAGTGTGATGACGCCGCCACCAGTGCACTACCTG...TGCTGGTCTTGTCACTGGTGTGCTGTGACAACTGTCTAAGCCCGTGGGGTTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
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| CDS-3UTR TCA 90 bp | GGAAACCCCACGGGCTTAGACAGTTGTCACAGCACACCAGTGACAAGACCAGCATGGACCATCAGTTTCTaGGCCTCTGCAACAGCACTG | + |
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Preference number: 4 (lower is better) Translates to: GNPTGLDSCHSTPVTRPAWTISF*ASATAL Trigger: CAGTGCTGTTGCAGAGGCTCAGAAACTGATGGTCCA...TGCTGGTCTTGTCACTGGTGTGCTGTGACAACTGTCTAAGCCCGTGGGGTTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
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| CDS-3UTR TCA 90 bp | AGCAAATCAAGGATGGGGTCTCTTGCTGGTGGCCAAGAACAAAACCTACACCTCAGAGCACCGGAGGACTaGCGAAGGACCGCAGAGCAT | + |
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Preference number: 4 (lower is better) Translates to: SKSRMGSLAGGQEQNLHLRAPED*RRTAEH Trigger: ATGCTCTGCGGTCCTTCGTCAGTCCTCCGGTGCTCT...GAGGTGTAGGTTTTGTTCTTGGCCACCAGCAAGAGACCCCATCCTTGATTTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
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| CDS-3UTR GCA 90 bp | GGAAACCCCACGGGCTTAGACAGTTGTCACAGCACACCAGTGACAAGACCAGCACACTCTGCTGAATGCTaGCAAGCACTGCTGGTGTTC | + |
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Preference number: 4 (lower is better) Translates to: GNPTGLDSCHSTPVTRPAHSAEC*QALLVF Trigger: GAACACCAGCAGTGCTTGGCAGCATTCAGCAGAGTG...TGCTGGTCTTGTCACTGGTGTGCTGTGACAACTGTCTAAGCCCGTGGGGTTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
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| CDS-3UTR CCA 90 bp | GGAAACCCCACGGGCTTAGACAGTTGTCACAGCACACCAGTGACAAGACCAGCATATATAGGCAACACTTaGGGGAGAGCACCGGAGGAC | + |
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Preference number: 4 (lower is better) Translates to: GNPTGLDSCHSTPVTRPAYIGNT*GRAPED Trigger: GTCCTCCGGTGCTCTCCCCCAAGTGTTGCCTATATA...TGCTGGTCTTGTCACTGGTGTGCTGTGACAACTGTCTAAGCCCGTGGGGTTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
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| CDS-3UTR TCA 90 bp | TTCAGTGTTTCTAGGAAATGGAAGGTGCCACAGGGTTGGGCTGGCATAGCTCCGGGCCTTCGAGCCATGTaGTCAAACAGCAGAAACAGG | + |
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Preference number: 4 (lower is better) Translates to: FSVSRKWKVPQGWAGIAPGLRAM*SNSRNR Trigger: CCTGTTTCTGCTGTTTGATCACATGGCTCGAAGGCC...CGGAGCTATGCCAGCCCAACCCTGTGGCACCTTCCATTTCCTAGAAACACTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
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| CDS-3UTR TCA 90 bp | AATGGGAAACCCCACGGGCTTAGACAGTTGTCACAGCACACCAGTGACAAGACCGCGTCATCACACTGTTaGACGGTGCAAACCTGTGCT | + |
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Preference number: 4 (lower is better) Translates to: NGKPHGLRQLSQHTSDKTASSHC*TVQTCA Trigger: AGCACAGGTTTGCACCGTTCAACAGTGTGATGACGC...GGTCTTGTCACTGGTGTGCTGTGACAACTGTCTAAGCCCGTGGGGTTTCCCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
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| CDS-3UTR GCA 90 bp | GGAAACCCCACGGGCTTAGACAGTTGTCACAGCACACCAGTGACAAGACCAGCACGTAAACACTGTCTGTaGCAAGGAATGGCCTTCGAG | + |
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Preference number: 4 (lower is better) Translates to: GNPTGLDSCHSTPVTRPARKHCL*QGMAFE Trigger: CTCGAAGGCCATTCCTTGGCACAGACAGTGTTTACG...TGCTGGTCTTGTCACTGGTGTGCTGTGACAACTGTCTAAGCCCGTGGGGTTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
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| CDS-3UTR GCA 90 bp | CTGCCCCTTCAGAGTACAAATGGGAAACCCCACGGGCTTAGACAGTTGTCACAGGGCAGAAAGAAGGTCTaGCGCCTGGACCATCAGTTT | + |
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Preference number: 4 (lower is better) Translates to: LPLQSTNGKPHGLRQLSQGRKKV*RLDHQF Trigger: AAACTGATGGTCCAGGCGGCAGACCTTCTTTCTGCC...CTGTGACAACTGTCTAAGCCCGTGGGGTTTCCCATTTGTACTCTGAAGGGGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
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| CDS-3UTR TCA 90 bp | CTGCCCCTTCAGAGTACAAATGGGAAACCCCACGGGCTTAGACAGTTGTCACAGGGTCAGACATTTCCTTaGACTGCAGGTAGTGCACTG | + |
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Preference number: 4 (lower is better) Translates to: LPLQSTNGKPHGLRQLSQGQTFP*TAGSAL Trigger: CAGTGCACTACCTGCAGTTCAAGGAAATGTCTGACC...CTGTGACAACTGTCTAAGCCCGTGGGGTTTCCCATTTGTACTCTGAAGGGGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
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| CDS-3UTR GCA 90 bp | TTCAGTGTTTCTAGGAAATGGAAGGTGCCACAGGGTTGGGCTGGCATAGCTCCGTGGGCTTGCGCACTTTaGCATCCATGTCAAAAGCGA | + |
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Preference number: 4 (lower is better) Translates to: FSVSRKWKVPQGWAGIAPWACAL*HPCQKR Trigger: TCGCTTTTGACATGGATGGCAAAGTGCGCAAGCCCA...CGGAGCTATGCCAGCCCAACCCTGTGGCACCTTCCATTTCCTAGAAACACTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
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| CDS-3UTR GCA 90 bp | AATGGGAAACCCCACGGGCTTAGACAGTTGTCACAGCACACCAGTGACAAGACCCACACTGTTGAACGGTaGAAACCTGTGCTCATACCG | + |
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Preference number: 4 (lower is better) Translates to: NGKPHGLRQLSQHTSDKTHTVER*KPVLIP Trigger: CGGTATGAGCACAGGTTTGCACCGTTCAACAGTGTG...GGTCTTGTCACTGGTGTGCTGTGACAACTGTCTAAGCCCGTGGGGTTTCCCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
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| CDS-3UTR CCA 90 bp | AGCAAATCAAGGATGGGGTCTCTTGCTGGTGGCCAAGAACAAAACCTACACCTCTGCCACATACAGCTCTaGAGACTGAGGAGGAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: SKSRMGSLAGGQEQNLHLCHIQL*RLRRRA Trigger: AGCCCTCCTCCTCAGTCTCCAGAGCTGTATGTGGCA...GAGGTGTAGGTTTTGTTCTTGGCCACCAGCAAGAGACCCCATCCTTGATTTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
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| CDS-3UTR TCA 90 bp | TTCAGAGTACAAATGGGAAACCCCACGGGCTTAGACAGTTGTCACAGCACACCATCTGCTGTTCCTCCATaGTCCTCTCCTCTGCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: FRVQMGNPTGLDSCHSTPSAVPP*SSPLPS Trigger: AGATGGCAGAGGAGAGGATCATGGAGGAACAGCAGA...TGGTGTGCTGTGACAACTGTCTAAGCCCGTGGGGTTTCCCATTTGTACTCTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
||
| CDS-3UTR GCA 90 bp | AGCAAATCAAGGATGGGGTCTCTTGCTGGTGGCCAAGAACAAAACCTACACCTCCTTCACTCTGCTGAATaGTGCCAAGCACTGCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SKSRMGSLAGGQEQNLHLLHSAE*CQALLV Trigger: CACCAGCAGTGCTTGGCAGCATTCAGCAGAGTGAAG...GAGGTGTAGGTTTTGTTCTTGGCCACCAGCAAGAGACCCCATCCTTGATTTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
||
| CDS-3UTR GCA 90 bp | AATGGGAAACCCCACGGGCTTAGACAGTTGTCACAGCACACCAGTGACAAGACCCAGTTTCTGAGCCTCTaGAACAGCACTGGTCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: NGKPHGLRQLSQHTSDKTQFLSL*NSTGLF Trigger: AAAGAGACCAGTGCTGTTGCAGAGGCTCAGAAACTG...GGTCTTGTCACTGGTGTGCTGTGACAACTGTCTAAGCCCGTGGGGTTTCCCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
||
| CDS-3UTR CCA 90 bp | TGCTTCAGTGTTTCTAGGAAATGGAAGGTGCCACAGGGTTGGGCTGGCATAGCTCATAGCGAGGGAAGGTaGGTGGAAGTAATCTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: CFSVSRKWKVPQGWAGIAHSEGR*VEVISG Trigger: ACCAGAGATTACTTCCACCCACCTTCCCTCGCTATG...AGCTATGCCAGCCCAACCCTGTGGCACCTTCCATTTCCTAGAAACACTGAAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
||
| CDS-3UTR CCA 90 bp | GGAAACCCCACGGGCTTAGACAGTTGTCACAGCACACCAGTGACAAGACCAGCACCACTGAGCAGATACTaGATCATAATCCGGAGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: GNPTGLDSCHSTPVTRPAPLSRY*IIIRRL Trigger: TAACCTCCGGATTATGATCCAGTATCTGCTCAGTGG...TGCTGGTCTTGTCACTGGTGTGCTGTGACAACTGTCTAAGCCCGTGGGGTTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
||
| CDS-3UTR TCA 90 bp | CTGCCCCTTCAGAGTACAAATGGGAAACCCCACGGGCTTAGACAGTTGTCACAGCCAAACAGCTTATCATaGAGCAGTTCTCCCAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: LPLQSTNGKPHGLRQLSQPNSLS*SSSPNF Trigger: GAAGTTGGGAGAACTGCTTCATGATAAGCTGTTTGG...CTGTGACAACTGTCTAAGCCCGTGGGGTTTCCCATTTGTACTCTGAAGGGGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
||
| CDS-3UTR TCA 90 bp | TGCTTCAGTGTTTCTAGGAAATGGAAGGTGCCACAGGGTTGGGCTGGCATAGCTTGGTGCAATGAGGTGTaGATGGCAGAAAGAAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: CFSVSRKWKVPQGWAGIAWCNEV*MAERRS Trigger: AGACCTTCTTTCTGCCATTCACACCTCATTGCACCA...AGCTATGCCAGCCCAACCCTGTGGCACCTTCCATTTCCTAGAAACACTGAAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
||
| CDS-3UTR TCA 90 bp | TGCTTCAGTGTTTCTAGGAAATGGAAGGTGCCACAGGGTTGGGCTGGCATAGCTTCACCATGTCTTGCATaGGATGAGTGCCAAAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: CFSVSRKWKVPQGWAGIASPCLA*DECQRP Trigger: AGGTCTTTGGCACTCATCTCATGCAAGACATGGTGA...AGCTATGCCAGCCCAACCCTGTGGCACCTTCCATTTCCTAGAAACACTGAAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
||
| CDS-3UTR TCA 90 bp | TGCTTCAGTGTTTCTAGGAAATGGAAGGTGCCACAGGGTTGGGCTGGCATAGCTAACGGCCGAACACAGTaGGTAACAAAGGAGTCGATA | + |
|
Preference number: 4 (lower is better) Translates to: CFSVSRKWKVPQGWAGIANGRTQ*VTKESI Trigger: TATCGACTCCTTTGTTACTCACTGTGTTCGGCCGTT...AGCTATGCCAGCCCAACCCTGTGGCACCTTCCATTTCCTAGAAACACTGAAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
||
| CDS-3UTR GCA 90 bp | AGCAGCAGACACTGCAGTGTGATGTGGTTTTCCTTCAACTGCATGACTAAAGACCCAAGCTTGTCTCTCTaGCGAGCCCTGTTATGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSRHCSVMWFSFNCMTKDPSLSL*RALLWP Trigger: TGGCCATAACAGGGCTCGGCAGAGAGACAAGCTTGG...GTCTTTAGTCATGCAGTTGAAGGAAAACCACATCACACTGCAGTGTCTGCTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
||
| CDS-3UTR GCA 90 bp | GACAAGACCAGCAGAGGAATGAGCAGCAAATCAAGGATGGGGTCTCTTGCTGGTCATAGTATGAAGCGCTaGATCAACCTTCTCTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: DKTSRGMSSKSRMGSLAGHSMKR*INLLCL Trigger: GAGGCAGAGAAGGTTGATGCAGCGCTTCATACTATG...ACCAGCAAGAGACCCCATCCTTGATTTGCTGCTCATTCCTCTGCTGGTCTTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
||
| CDS-3UTR GCA 90 bp | CTGCCCCTTCAGAGTACAAATGGGAAACCCCACGGGCTTAGACAGTTGTCACAGAAAGTGCTTACTAGCTaGCACATACAGCTCTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LPLQSTNGKPHGLRQLSQKVLTS*HIQLWR Trigger: TCTCCAGAGCTGTATGTGGCAGCTAGTAAGCACTTT...CTGTGACAACTGTCTAAGCCCGTGGGGTTTCCCATTTGTACTCTGAAGGGGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
||
| CDS-3UTR CCA 90 bp | TTCAGAGTACAAATGGGAAACCCCACGGGCTTAGACAGTTGTCACAGCACACCAGCAATGAGGTGTGAATaGCAGAAAGAAGGTCTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: FRVQMGNPTGLDSCHSTPAMRCE*QKEGLP Trigger: CGGCAGACCTTCTTTCTGCCATTCACACCTCATTGC...TGGTGTGCTGTGACAACTGTCTAAGCCCGTGGGGTTTCCCATTTGTACTCTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
||
| CDS-3UTR CCA 90 bp | TTCAGTGTTTCTAGGAAATGGAAGGTGCCACAGGGTTGGGCTGGCATAGCTCCGCCCATCATAATTGGATaGTCTCCTTTGGTAGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FSVSRKWKVPQGWAGIAPPIIIG*SPLVVP Trigger: TGGCACTACCAAAGGAGACCATCCAATTATGATGGG...CGGAGCTATGCCAGCCCAACCCTGTGGCACCTTCCATTTCCTAGAAACACTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
||
| CDS-3UTR CCA 90 bp | GCATGCTTCAGTGTTTCTAGGAAATGGAAGGTGCCACAGGGTTGGGCTGGCATATGTCAAGCTCAAACTTaGGCTTGCGCACTTTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: ACFSVSRKWKVPQGWAGICQAQT*ACALCH Trigger: ATGGCAAAGTGCGCAAGCCCAAGTTTGAGCTTGACA...TATGCCAGCCCAACCCTGTGGCACCTTCCATTTCCTAGAAACACTGAAGCATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
||
| CDS-3UTR CCA 90 bp | GACAAGACCAGCAGAGGAATGAGCAGCAAATCAAGGATGGGGTCTCTTGCTGGTCCACAAAGTTGGGCTTaGCAACCTTCAGGATTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: DKTSRGMSSKSRMGSLAGPQSWA*QPSGFY Trigger: GTAGAATCCTGAAGGTTGCCAAGCCCAACTTTGTGG...ACCAGCAAGAGACCCCATCCTTGATTTGCTGCTCATTCCTCTGCTGGTCTTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
||
| CDS-3UTR TCA 90 bp | TTCAGTGTTTCTAGGAAATGGAAGGTGCCACAGGGTTGGGCTGGCATAGCTCCGCAGTCCTTAGCCTGGTaGTTATTATATAGGCAACAC | + |
|
Preference number: 4 (lower is better) Translates to: FSVSRKWKVPQGWAGIAPQSLAW*LLYRQH Trigger: GTGTTGCCTATATAATAATCACCAGGCTAAGGACTG...CGGAGCTATGCCAGCCCAACCCTGTGGCACCTTCCATTTCCTAGAAACACTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
||
| CDS-3UTR TCA 90 bp | TTCTGTCACCATGTGTGGCAGACTGATGTCTTCCCTAGAGTGGACACGGTCATCATCATTTTTGCCTGCTaGAAGTGCTTACTAGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: FCHHVWQTDVFPRVDTVIIIFAC*KCLLAA Trigger: GGCAGCTAGTAAGCACTTTCAGCAGGCAAAAATGAT...GATGACCGTGTCCACTCTAGGGAAGACATCAGTCTGCCACACATGGTGACAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
||
| CDS-3UTR CCA 90 bp | GCATGCTTCAGTGTTTCTAGGAAATGGAAGGTGCCACAGGGTTGGGCTGGCATAACTGACCTCACGGTCTaGATTGGGGATATTTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: ACFSVSRKWKVPQGWAGITDLTV*IGDIFK Trigger: CTTGAAAATATCCCCAATCCAGACCGTGAGGTCAGT...TATGCCAGCCCAACCCTGTGGCACCTTCCATTTCCTAGAAACACTGAAGCATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
||
| CDS-3UTR TCA 90 bp | TCCACGAGGAAAGTGGTTTGTAACAGAGATCTTGAAAGAACACATGGTGACTGCGGCCTTCGAGCCATGTaGTCAAACAGCAGAAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: STRKVVCNRDLERTHGDCGLRAM*SNSRNR Trigger: CCTGTTTCTGCTGTTTGATCACATGGCTCGAAGGCC...GCAGTCACCATGTGTTCTTTCAAGATCTCTGTTACAAACCACTTTCCTCGTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164011.8 |
||
| CDS-3UTR TCA 90 bp | GACAAGACCAGCAGAGGAATGAGCAGCAAATCAAGGATGGGGTCTCTTGCTGGTATGTCTTGCATGAGATaGGTGCCAAAGACCTTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: DKTSRGMSSKSRMGSLAGMSCMR*VPKTFL Trigger: CAAAAAGGTCTTTGGCACTCATCTCATGCAAGACAT...ACCAGCAAGAGACCCCATCCTTGATTTGCTGCTCATTCCTCTGCTGGTCTTGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
||
| CDS-3UTR TCA 90 bp | AGCAGCAGACACTGCAGTGTGATGTGGTTTTCCTTCAACTGCATGACTAAAGACGCCAGATGTTGTCTCTaGGGCTCCTGTTTCAACAAC | + |
|
Preference number: 4 (lower is better) Translates to: SSRHCSVMWFSFNCMTKDARCCL*GSCFNN Trigger: GTTGTTGAAACAGGAGCCTCAGAGACAACATCTGGC...GTCTTTAGTCATGCAGTTGAAGGAAAACCACATCACACTGCAGTGTCTGCTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
||
| CDS-3UTR GCA 90 bp | GGAAACCCCACGGGCTTAGACAGTTGTCACAGCACACCAGTGACAAGACCAGCATCTTTTAATTATTTTTaGATAGCGAGGGAAGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GNPTGLDSCHSTPVTRPASFNYF*IAREGG Trigger: CCCACCTTCCCTCGCTATGCAAAAATAATTAAAAGA...TGCTGGTCTTGTCACTGGTGTGCTGTGACAACTGTCTAAGCCCGTGGGGTTTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
||
| CDS-3UTR GCA 90 bp | TTCAGAGTACAAATGGGAAACCCCACGGGCTTAGACAGTTGTCACAGCACACCAAGTAGTACTCATGCATaGTGTACAGCTCCAGCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: FRVQMGNPTGLDSCHSTPSSTHA*CTAPAQ Trigger: TTGAGCTGGAGCTGTACAGCATGCATGAGTACTACT...TGGTGTGCTGTGACAACTGTCTAAGCCCGTGGGGTTTCCCATTTGTACTCTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
||
| CDS-3UTR GCA 90 bp | AGCAGCAGACACTGCAGTGTGATGTGGTTTTCCTTCAACTGCATGACTAAAGACTGCTCATACCGGACCTaGTCACTGTCAAGCTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SSRHCSVMWFSFNCMTKDCSYRT*SLSSSN Trigger: GTTTGAGCTTGACAGTGAGCAGGTCCGGTATGAGCA...GTCTTTAGTCATGCAGTTGAAGGAAAACCACATCACACTGCAGTGTCTGCTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
||
| CDS-3UTR CCA 90 bp | TTCAGAGTACAAATGGGAAACCCCACGGGCTTAGACAGTTGTCACAGCACACCAGCATCTTCAAAATCCTaGGTTATGTCCACCCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: FRVQMGNPTGLDSCHSTPASSKS*VMSTQL Trigger: AAGCTGGGTGGACATAACCCAGGATTTTGAAGATGC...TGGTGTGCTGTGACAACTGTCTAAGCCCGTGGGGTTTCCCATTTGTACTCTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
||
| CDS-3UTR CCA 90 bp | TTCTGTCACCATGTGTGGCAGACTGATGTCTTCCCTAGAGTGGACACGGTCATCACTTTTCTATTCACTTaGTTCCCGATCATACCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: FCHHVWQTDVFPRVDTVITFLFT*FPIIPA Trigger: TGCCGGTATGATCGGGAACCAAGTGAATAGAAAAGT...GATGACCGTGTCCACTCTAGGGAAGACATCAGTCTGCCACACATGGTGACAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
||
| CDS-3UTR CCA 90 bp | TTCAGTGTTTCTAGGAAATGGAAGGTGCCACAGGGTTGGGCTGGCATAGCTCCGCCGTATGTCATTGACTaGAAATCTTCCTCTTCGAAA | + |
|
Preference number: 4 (lower is better) Translates to: FSVSRKWKVPQGWAGIAPPYVID*KSSSSK Trigger: TTTCGAAGAGGAAGATTTCCAGTCAATGACATACGG...CGGAGCTATGCCAGCCCAACCCTGTGGCACCTTCCATTTCCTAGAAACACTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
||
| CDS-3UTR TCA 90 bp | AGCAAATCAAGGATGGGGTCTCTTGCTGGTGGCCAAGAACAAAACCTACACCTCTGGCAGGATCTTCTATaGAGTCGGGATTATGAATGT | + |
|
Preference number: 4 (lower is better) Translates to: SKSRMGSLAGGQEQNLHLWQDLL*SRDYEC Trigger: ACATTCATAATCCCGACTTCATAGAAGATCCTGCCA...GAGGTGTAGGTTTTGTTCTTGGCCACCAGCAAGAGACCCCATCCTTGATTTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
||
| CDS-3UTR GCA 90 bp | CTGCCCCTTCAGAGTACAAATGGGAAACCCCACGGGCTTAGACAGTTGTCACAGAGAACACATGGTGACTaGTCACTAAATTCACAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LPLQSTNGKPHGLRQLSQRTHGD*SLNSQK Trigger: TTTCTGTGAATTTAGTGAGCAGTCACCATGTGTTCT...CTGTGACAACTGTCTAAGCCCGTGGGGTTTCCCATTTGTACTCTGAAGGGGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
||
| CDS-3UTR GCA 90 bp | CTGCCCCTTCAGAGTACAAATGGGAAACCCCACGGGCTTAGACAGTTGTCACAGTTCAAGGATCATTTTTaGCTGCTGAAAGTGCTTACT | + |
|
Preference number: 4 (lower is better) Translates to: LPLQSTNGKPHGLRQLSQFKDHF*LLKVLT Trigger: AGTAAGCACTTTCAGCAGGCAAAAATGATCCTTGAA...CTGTGACAACTGTCTAAGCCCGTGGGGTTTCCCATTTGTACTCTGAAGGGGCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
||
| CDS-3UTR CCA 90 bp | AATGGGAAACCCCACGGGCTTAGACAGTTGTCACAGCACACCAGTGACAAGACCAAAACCCATCATAATTaGATGGTCTCCTTTGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: NGKPHGLRQLSQHTSDKTKTHHN*MVSFGS Trigger: ACTACCAAAGGAGACCATCCAATTATGATGGGTTTT...GGTCTTGTCACTGGTGTGCTGTGACAACTGTCTAAGCCCGTGGGGTTTCCCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
||
| CDS-3UTR GCA 90 bp | GCATGCTTCAGTGTTTCTAGGAAATGGAAGGTGCCACAGGGTTGGGCTGGCATAATTTACTTTTTCCCGTaGAATGTCGCAGATCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: ACFSVSRKWKVPQGWAGIIYFFP*NVADLQ Trigger: TTGAAGATCTGCGACATTGCACGGGAAAAAGTAAAT...TATGCCAGCCCAACCCTGTGGCACCTTCCATTTCCTAGAAACACTGAAGCATGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
||
| CDS-3UTR GCA 90 bp | TACAGTGTAAGTTTGGTAAGTTCACGACTTCACAGACAGTTTTTATTCTGTCTACGTAAACACTGTCTGTaGCAAGGAATGGCCTTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: YSVSLVSSRLHRQFLFCLRKHCL*QGMAFE Trigger: CTCGAAGGCCATTCCTTGGCACAGACAGTGTTTACG...TAGACAGAATAAAAACTGTCTGTGAAGTCGTGAACTTACCAAACTTACACTGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164011.8 |
||
| CDS-3UTR TCA 90 bp | TACAGTGTAAGTTTGGTAAGTTCACGACTTCACAGACAGTTTTTATTCTGTCTATGGCAGGATCTTCTATaGAGTCGGGATTATGAATGT | + |
|
Preference number: 4 (lower is better) Translates to: YSVSLVSSRLHRQFLFCLWQDLL*SRDYEC Trigger: ACATTCATAATCCCGACTTCATAGAAGATCCTGCCA...TAGACAGAATAAAAACTGTCTGTGAAGTCGTGAACTTACCAAACTTACACTGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164011.8 |
||
| CDS-3UTR GCA 90 bp | TGTAACAGAGATCTTGAAAGAACACATGGTGACTGCTCACTAAATTCACAGAAAATTTACTTTTTCCCGTaGAATGTCGCAGATCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: CNRDLERTHGDCSLNSQKIYFFP*NVADLQ Trigger: TTGAAGATCTGCGACATTGCACGGGAAAAAGTAAAT...TTTCTGTGAATTTAGTGAGCAGTCACCATGTGTTCTTTCAAGATCTCTGTTACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164011.8 |
||
| CDS-3UTR CCA 90 bp | CAGTGTAAGTTTGGTAAGTTCACGACTTCACAGACAGTTTTTATTCTGTCTATTCCGTATGTCATTGACTaGAAATCTTCCTCTTCGAAA | + |
|
Preference number: 4 (lower is better) Translates to: QCKFGKFTTSQTVFILSIPYVID*KSSSSK Trigger: TTTCGAAGAGGAAGATTTCCAGTCAATGACATACGG...AATAGACAGAATAAAAACTGTCTGTGAAGTCGTGAACTTACCAAACTTACACTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164011.8 |
||
| CDS TCA 90 bp | CTGCGGCCTTTCTGCTGTTCCTCCATGATCCTCTCCTCTGCCATCTaGGAGCCGTCAGCGCGGCTCAGGGTTGACATCAGCCATGCATAC | + |
|
Preference number: 5 (lower is better) Translates to: LRPFCCSSMILSSAI*EPSARLRVDISHAY Trigger: GTATGCATGGCTGATGTCAACCCTGAGCCGCGCTGACGGCTCTCAGATGGCAGAGGAGAGGATCATGGAGGAACAGCAGAAAGGCCGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
||
| CDS TCA 90 bp | GATCCTCTCCTCTGCCATCTGAGAGCCGTCAGCGCGGCTCAGGGTTaGCATCAGCCATGCATACAGGAACTCGGAGAGGTACCAGTAGAT | + |
|
Preference number: 5 (lower is better) Translates to: DPLLCHLRAVSAAQG*HQPCIQELGEVPVD Trigger: ATCTACTGGTACCTCTCCGAGTTCCTGTATGCATGGCTGATGTCAACCCTGAGCCGCGCTGACGGCTCTCAGATGGCAGAGGAGAGGATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
||
| CDS GCA 90 bp | TGCACTGGTGGCGGCGTCATCACACTGTTGAACGGTGCAAACCTGTaGTCATACCGGACCTGCTCACTGTCAAGCTCAAACTTGGGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: CTGGGVITLLNGANL*SYRTCSLSSSNLGL Trigger: CAAGCCCAAGTTTGAGCTTGACAGTGAGCAGGTCCGGTATGAGCACAGGTTTGCACCGTTCAACAGTGTGATGACGCCGCCACCAGTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
||
| CDS GCA 90 bp | CTGCAGGTAGTGCACTGGTGGCGGCGTCATCACACTGTTGAACGGTaGAAACCTGTGCTCATACCGGACCTGCTCACTGTCAAGCTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: LQVVHWWRRHHTVER*KPVLIPDLLTVKLK Trigger: TTTGAGCTTGACAGTGAGCAGGTCCGGTATGAGCACAGGTTTGCACCGTTCAACAGTGTGATGACGCCGCCACCAGTGCACTACCTGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
||
| CDS-3UTR CAA 90 bp | TTCAGTGTTTCTAGGAAATGGAAGGTGCCACAGGGTTGGGCTGGCATAGCTCCGCAGCGCGGCTCAGGGTaGACATCAGCCATGCATACA | + |
|
Preference number: 5 (lower is better) Translates to: FSVSRKWKVPQGWAGIAPQRGSG*TSAMHT Trigger: TGTATGCATGGCTGATGTCAACCCTGAGCCGCGCTG...CGGAGCTATGCCAGCCCAACCCTGTGGCACCTTCCATTTCCTAGAAACACTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
||
| CDS-3UTR CAA 90 bp | AATGGGAAACCCCACGGGCTTAGACAGTTGTCACAGCACACCAGTGACAAGACCGGCGTCATCACACTGTaGAACGGTGCAAACCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: NGKPHGLRQLSQHTSDKTGVITL*NGANLC Trigger: GCACAGGTTTGCACCGTTCAACAGTGTGATGACGCC...GGTCTTGTCACTGGTGTGCTGTGACAACTGTCTAAGCCCGTGGGGTTTCCCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
||
| CDS GCA 90 bp | GTCATCACACTGTTGAACGGTGCAAACCTGTGCTCATACCGGACCTaGTCACTGTCAAGCTCAAACTTGGGCTTGCGCACTTTGCCATCC | + |
|
Preference number: 5 (lower is better) Translates to: VITLLNGANLCSYRT*SLSSSNLGLRTLPS Trigger: GGATGGCAAAGTGCGCAAGCCCAAGTTTGAGCTTGACAGTGAGCAGGTCCGGTATGAGCACAGGTTTGCACCGTTCAACAGTGTGATGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
||
| CDS CCA 90 bp | CAAACCTGTGCTCATACCGGACCTGCTCACTGTCAAGCTCAAACTTaGGCTTGCGCACTTTGCCATCCATGTCAAAAGCGACCATCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: QTCAHTGPAHCQAQT*ACALCHPCQKRPSS Trigger: AGACGATGGTCGCTTTTGACATGGATGGCAAAGTGCGCAAGCCCAAGTTTGAGCTTGACAGTGAGCAGGTCCGGTATGAGCACAGGTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
||
| CDS-3UTR CAA 90 bp | AATGGGAAACCCCACGGGCTTAGACAGTTGTCACAGCACACCAGTGACAAGACCCTTCTCTGCCTCATCTaGCAAGGTAGCAAACTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: NGKPHGLRQLSQHTSDKTLLCLI*QGSKLL Trigger: GAGGAGTTTGCTACCTTGCAAGATGAGGCAGAGAAG...GGTCTTGTCACTGGTGTGCTGTGACAACTGTCTAAGCCCGTGGGGTTTCCCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
||
| CDS-3UTR CAA 90 bp | TTCTGTCACCATGTGTGGCAGACTGATGTCTTCCCTAGAGTGGACACGGTCATCTTGGGCTTGCGCACTTaGCCATCCATGTCAAAAGCG | + |
|
Preference number: 5 (lower is better) Translates to: FCHHVWQTDVFPRVDTVILGLRT*PSMSKA Trigger: CGCTTTTGACATGGATGGCAAAGTGCGCAAGCCCAA...GATGACCGTGTCCACTCTAGGGAAGACATCAGTCTGCCACACATGGTGACAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
||
| CDS-3UTR CAA 90 bp | TTCTGTCACCATGTGTGGCAGACTGATGTCTTCCCTAGAGTGGACACGGTCATCAGCTCAAACTTGGGCTaGCGCACTTTGCCATCCATG | + |
|
Preference number: 5 (lower is better) Translates to: FCHHVWQTDVFPRVDTVISSNLG*RTLPSM Trigger: CATGGATGGCAAAGTGCGCAAGCCCAAGTTTGAGCT...GATGACCGTGTCCACTCTAGGGAAGACATCAGTCTGCCACACATGGTGACAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
||
| CDS-3UTR CAA 90 bp | TTCTGTCACCATGTGTGGCAGACTGATGTCTTCCCTAGAGTGGACACGGTCATCCTGTCAAGCTCAAACTaGGGCTTGCGCACTTTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: FCHHVWQTDVFPRVDTVILSSSN*GLRTLP Trigger: TGGCAAAGTGCGCAAGCCCAAGTTTGAGCTTGACAG...GATGACCGTGTCCACTCTAGGGAAGACATCAGTCTGCCACACATGGTGACAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
||
| CDS-3UTR CAA 90 bp | GGAAACCCCACGGGCTTAGACAGTTGTCACAGCACACCAGTGACAAGACCAGCAATCTCTCTCTTCTCCTaGTCGACTTCGAGTACTCTT | + |
|
Preference number: 5 (lower is better) Translates to: GNPTGLDSCHSTPVTRPAISLFS*STSSTL Trigger: AAGAGTACTCGAAGTCGACAAGGAGAAGAGAGAGAT...TGCTGGTCTTGTCACTGGTGTGCTGTGACAACTGTCTAAGCCCGTGGGGTTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
||
| CDS-3UTR CAA 90 bp | GGAAACCCCACGGGCTTAGACAGTTGTCACAGCACACCAGTGACAAGACCAGCAGTGCCAAAGACCTTTTaGTTATCCACGAGGAAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: GNPTGLDSCHSTPVTRPAVPKTF*LSTRKV Trigger: CACTTTCCTCGTGGATAACAAAAAGGTCTTTGGCAC...TGCTGGTCTTGTCACTGGTGTGCTGTGACAACTGTCTAAGCCCGTGGGGTTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
||
| CDS-3UTR CAA 90 bp | CTGCCCCTTCAGAGTACAAATGGGAAACCCCACGGGCTTAGACAGTTGTCACAGACCTTTGACTCTTTTTaGTGTCCTCCTGCTAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LPLQSTNGKPHGLRQLSQTFDSF*CPPAKS Trigger: GCTCTTAGCAGGAGGACACAAAAAAGAGTCAAAGGT...CTGTGACAACTGTCTAAGCCCGTGGGGTTTCCCATTTGTACTCTGAAGGGGCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
||
| CDS CCA 90 bp | TTTATTGAGGTCAGACATTTCCTTGAACTGCAGGTAGTGCACTGGTaGCGGCGTCATCACACTGTTGAACGGTGCAAACCTGTGCTCATA | + |
|
Preference number: 5 (lower is better) Translates to: FIEVRHFLELQVVHW*RRHHTVERCKPVLI Trigger: TATGAGCACAGGTTTGCACCGTTCAACAGTGTGATGACGCCGCCACCAGTGCACTACCTGCAGTTCAAGGAAATGTCTGACCTCAATAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
||
| CDS-3UTR CAA 90 bp | AATGGGAAACCCCACGGGCTTAGACAGTTGTCACAGCACACCAGTGACAAGACCGGATACAGTGTAAGTTaGGTAAGTTCACGACTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: NGKPHGLRQLSQHTSDKTGYSVS*VSSRLH Trigger: GTGAAGTCGTGAACTTACCAAACTTACACTGTATCC...GGTCTTGTCACTGGTGTGCTGTGACAACTGTCTAAGCCCGTGGGGTTTCCCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
||
| CDS-3UTR CAA 90 bp | AGCAAATCAAGGATGGGGTCTCTTGCTGGTGGCCAAGAACAAAACCTACACCTCACCTCACGGTCTGGATaGGGGATATTTTCAAGGATC | + |
|
Preference number: 5 (lower is better) Translates to: SKSRMGSLAGGQEQNLHLTSRSG*GIFSRI Trigger: GATCCTTGAAAATATCCCCAATCCAGACCGTGAGGT...GAGGTGTAGGTTTTGTTCTTGGCCACCAGCAAGAGACCCCATCCTTGATTTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
||
| CDS-3UTR CAA 90 bp | TTCAGAGTACAAATGGGAAACCCCACGGGCTTAGACAGTTGTCACAGCACACCATTCATAACCACAAAGTaGGGCTTGGCAACCTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: FRVQMGNPTGLDSCHSTPFITTK*GLATFR Trigger: CCTGAAGGTTGCCAAGCCCAACTTTGTGGTTATGAA...TGGTGTGCTGTGACAACTGTCTAAGCCCGTGGGGTTTCCCATTTGTACTCTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
||
| CDS-3UTR CAA 90 bp | GCATGCTTCAGTGTTTCTAGGAAATGGAAGGTGCCACAGGGTTGGGCTGGCATAATCTTTCACCATGTCTaGCATGAGATGAGTGCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: ACFSVSRKWKVPQGWAGIIFHHV*HEMSAK Trigger: TTTGGCACTCATCTCATGCAAGACATGGTGAAAGAT...TATGCCAGCCCAACCCTGTGGCACCTTCCATTTCCTAGAAACACTGAAGCATGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
||
| CDS TCA 90 bp | CTGACGAAGGACCGCAGAGCATCTTTCACCATGTCTTGCATGAGATaGGTGCCAAAGACCTTTTTGTTATCCACGAGGAAAGTGGTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: LTKDRRASFTMSCMR*VPKTFLLSTRKVVC Trigger: ACAAACCACTTTCCTCGTGGATAACAAAAAGGTCTTTGGCACTCATCTCATGCAAGACATGGTGAAAGATGCTCTGCGGTCCTTCGTCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022038.15 ENSMUST00000172166.8 ENSMUST00000172419.8 |
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| CDS GCA 90 bp | ATGTTGTCTCTGAGGCTCCTGTTTCAACAACATAGTATGAAGCGCTaGATCAACCTTCTCTGCCTCATCTTGCAAGGTAGCAAACTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: MLSLRLLFQQHSMKR*INLLCLILQGSKLL Trigger: GAGGAGTTTGCTACCTTGCAAGATGAGGCAGAGAAGGTTGATGCAGCGCTTCATACTATGTTGTTGAAACAGGAGCCTCAGAGACAACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
||
| CDS CCA 90 bp | CATTTTTGCCTGCTGAAAGTGCTTACTAGCTGCCACATACAGCTCTaGAGACTGAGGAGGAGGGCTGTATTTATTGAGGTCAGACATTTC | + |
|
Preference number: 5 (lower is better) Translates to: HFCLLKVLTSCHIQL*RLRRRAVFIEVRHF Trigger: GAAATGTCTGACCTCAATAAATACAGCCCTCCTCCTCAGTCTCCAGAGCTGTATGTGGCAGCTAGTAAGCACTTTCAGCAGGCAAAAATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
||
| CDS GCA 90 bp | TATGAAGTCGGGATTATGAATGTAAAGGCACGTAAACACTGTCTGTaGCAAGGAATGGCCTTCGAGCCATGTGATCAAACAGCAGAAACA | + |
|
Preference number: 5 (lower is better) Translates to: YEVGIMNVKARKHCL*QGMAFEPCDQTAET Trigger: TGTTTCTGCTGTTTGATCACATGGCTCGAAGGCCATTCCTTGGCACAGACAGTGTTTACGTGCCTTTACATTCATAATCCCGACTTCATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022038.15 ENSMUST00000164011.8 ENSMUST00000166923.9 ENSMUST00000172419.8 |
||
| CDS-3UTR CAA 90 bp | TTCAGAGTACAAATGGGAAACCCCACGGGCTTAGACAGTTGTCACAGCACACCATTAATGGTGCCATCCTaGATAGCTTGTTCAAAATTG | + |
|
Preference number: 5 (lower is better) Translates to: FRVQMGNPTGLDSCHSTPLMVPS*IACSKL Trigger: CAATTTTGAACAAGCTATCAAGGATGGCACCATTAA...TGGTGTGCTGTGACAACTGTCTAAGCCCGTGGGGTTTCCCATTTGTACTCTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
||
| CDS-3UTR CAA 90 bp | AGCAGCAGACACTGCAGTGTGATGTGGTTTTCCTTCAACTGCATGACTAAAGACAGATCTGTCACACTGTaGGCCATTTTAAATCCGTAT | + |
|
Preference number: 5 (lower is better) Translates to: SSRHCSVMWFSFNCMTKDRSVTL*AILNPY Trigger: ATACGGATTTAAAATGGCCAACAGTGTGACAGATCT...GTCTTTAGTCATGCAGTTGAAGGAAAACCACATCACACTGCAGTGTCTGCTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
||
| CDS-3UTR CAA 90 bp | AGCAGCAGACACTGCAGTGTGATGTGGTTTTCCTTCAACTGCATGACTAAAGACTTTCAAGGATCATTTTaGCCTGCTGAAAGTGCTTAC | + |
|
Preference number: 5 (lower is better) Translates to: SSRHCSVMWFSFNCMTKDFQGSF*PAESAY Trigger: GTAAGCACTTTCAGCAGGCAAAAATGATCCTTGAAA...GTCTTTAGTCATGCAGTTGAAGGAAAACCACATCACACTGCAGTGTCTGCTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
||
| CDS TCA 90 bp | TCGGAGATCTGTCACACTGTTGGCCATTTTAAATCCGTATGTCATTaGCTGGAAATCTTCTTTTTCCCGTGCAATGTCGCAGATCTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: SEICHTVGHFKSVCH*LEIFFFPCNVADLQ Trigger: TTGAAGATCTGCGACATTGCACGGGAAAAAGAAGATTTCCAGTCAATGACATACGGATTTAAAATGGCCAACAGTGTGACAGATCTCCGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166923.9 |
||
| CDS-3UTR CAA 90 bp | AGCAGCAGACACTGCAGTGTGATGTGGTTTTCCTTCAACTGCATGACTAAAGACGCCATCCTTGATAGCTaGTTCAAAATTGAGAACTTT | + |
|
Preference number: 5 (lower is better) Translates to: SSRHCSVMWFSFNCMTKDAILDS*FKIENF Trigger: AAAGTTCTCAATTTTGAACAAGCTATCAAGGATGGC...GTCTTTAGTCATGCAGTTGAAGGAAAACCACATCACACTGCAGTGTCTGCTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
||
| CDS-3UTR CAA 90 bp | TATCCACGAGGAAAGTGGTTTGTAACAGAGATCTTGAAAGAACACATGGTGACTATCTCTCTCTTCTCCTaGTCGACTTCGAGTACTCTT | + |
|
Preference number: 5 (lower is better) Translates to: YPRGKWFVTEILKEHMVTISLFS*STSSTL Trigger: AAGAGTACTCGAAGTCGACAAGGAGAAGAGAGAGAT...AGTCACCATGTGTTCTTTCAAGATCTCTGTTACAAACCACTTTCCTCGTGGATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164011.8 |
||
| CDS-3UTR CAA 90 bp | TCCACGAGGAAAGTGGTTTGTAACAGAGATCTTGAAAGAACACATGGTGACTGCTTAATGGTGCCATCCTaGATAGCTTGTTCAAAATTG | + |
|
Preference number: 5 (lower is better) Translates to: STRKVVCNRDLERTHGDCLMVPS*IACSKL Trigger: CAATTTTGAACAAGCTATCAAGGATGGCACCATTAA...GCAGTCACCATGTGTTCTTTCAAGATCTCTGTTACAAACCACTTTCCTCGTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164011.8 |
||
| CDS CCA 90 bp | CCATCCTTGATAGCTTGTTCAAAATTGAGAACTTTTCTATTCACTTaGTTCCCGATCATACCGGCATCCATCTTAGGATCCATCATTTCA | + |
|
Preference number: 5 (lower is better) Translates to: PSLIACSKLRTFLFT*FPIIPASILGSIIS Trigger: TGAAATGATGGATCCTAAGATGGATGCCGGTATGATCGGGAACCAAGTGAATAGAAAAGTTCTCAATTTTGAACAAGCTATCAAGGATGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022038.15 ENSMUST00000166923.9 ENSMUST00000168367.8 ENSMUST00000172419.8 |
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| CDS CCA 90 bp | AGATCTGTCACACTGTTGGCCATTTTAAATCCGTATGTCATTGACTaGAAATCTTCTTTTTCCCGTGCAATGTCGCAGATCTTCAAGATT | + |
|
Preference number: 5 (lower is better) Translates to: RSVTLLAILNPYVID*KSSFSRAMSQIFKI Trigger: AATCTTGAAGATCTGCGACATTGCACGGGAAAAAGAAGATTTCCAGTCAATGACATACGGATTTAAAATGGCCAACAGTGTGACAGATCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166923.9 |
||
| CDS-3UTR CAA 90 bp | TGTAACAGAGATCTTGAAAGAACACATGGTGACTGCTCACTAAATTCACAGAAAGCCATCCTTGATAGCTaGTTCAAAATTGAGAACTTT | + |
|
Preference number: 5 (lower is better) Translates to: CNRDLERTHGDCSLNSQKAILDS*FKIENF Trigger: AAAGTTCTCAATTTTGAACAAGCTATCAAGGATGGC...TTTCTGTGAATTTAGTGAGCAGTCACCATGTGTTCTTTCAAGATCTCTGTTACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164011.8 |
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| CDS TCA 72 bp | TTCTGCTGTTCCTCCATGATCCTCTCCTCTGCCATCTaGGAGCCGTCAGCGCGGCTCAGGGTTGACATCAGC | + |
|
Preference number: 6 (lower is better) Translates to: FCCSSMILSSAI*EPSARLRVDIS Trigger: GCTGATGTCAACCCTGAGCCGCGCTGACGGCTCTCAGATGGCAGAGGAGAGGATCATGGAGGAACAGCAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
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| CDS TCA 72 bp | GCAGGTAGTGCACTGGTGGCGGCGTCATCACACTGTTaGACGGTGCAAACCTGTGCTCATACCGGACCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: AGSALVAASSHC*TVQTCAHTGPA Trigger: AGCAGGTCCGGTATGAGCACAGGTTTGCACCGTTCAACAGTGTGATGACGCCGCCACCAGTGCACTACCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
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| CDS GCA 72 bp | GTGCACTGGTGGCGGCGTCATCACACTGTTGAACGGTaGAAACCTGTGCTCATACCGGACCTGCTCACTGTC | + |
|
Preference number: 6 (lower is better) Translates to: VHWWRRHHTVER*KPVLIPDLLTV Trigger: GACAGTGAGCAGGTCCGGTATGAGCACAGGTTTGCACCGTTCAACAGTGTGATGACGCCGCCACCAGTGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
||
| CDS CAA 72 bp | CTGGGTTCTCTGTATGAAGACTCGGTGCTTTCCTCTTaGGGGGAGAGCACCGGAGGACTGACGAAGGACCGC | + |
|
Preference number: 6 (lower is better) Translates to: LGSLYEDSVLSS*GESTGGLTKDR Trigger: GCGGTCCTTCGTCAGTCCTCCGGTGCTCTCCCCCAAAGAGGAAAGCACCGAGTCTTCATACAGAGAACCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172166.8 |
||
| CDS TCA 72 bp | CGGTGCTTTCCTCTTTGGGGGAGAGCACCGGAGGACTaGCGAAGGACCGCAGAGCATCTTTCACCATGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: RCFPLWGRAPED*RRTAEHLSPCL Trigger: AAGACATGGTGAAAGATGCTCTGCGGTCCTTCGTCAGTCCTCCGGTGCTCTCCCCCAAAGAGGAAAGCACCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172166.8 |
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| CDS GCA 72 bp | GGCGGCGTCATCACACTGTTGAACGGTGCAAACCTGTaGTCATACCGGACCTGCTCACTGTCAAGCTCAAAC | + |
|
Preference number: 6 (lower is better) Translates to: GGVITLLNGANL*SYRTCSLSSSN Trigger: GTTTGAGCTTGACAGTGAGCAGGTCCGGTATGAGCACAGGTTTGCACCGTTCAACAGTGTGATGACGCCGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
||
| CDS CCA 72 bp | TCTGAGCCTGGATGCCGTGGTGCAATGAGGTGTGAATaGCAGAAAGAAGGTCTGCCGCCTGGACCATCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: SEPGCRGAMRCE*QKEGLPPGPSV Trigger: AACTGATGGTCCAGGCGGCAGACCTTCTTTCTGCCATTCACACCTCATTGCACCACGGCATCCAGGCTCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022038.15 ENSMUST00000172166.8 ENSMUST00000172419.8 |
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| CDS GCA 72 bp | ACCGGACCTGCTCACTGTCAAGCTCAAACTTGGGCTTaGGCACTTTGCCATCCATGTCAAAAGCGACCATCG | + |
|
Preference number: 6 (lower is better) Translates to: TGPAHCQAQTWA*ALCHPCQKRPS Trigger: CGATGGTCGCTTTTGACATGGATGGCAAAGTGCGCAAGCCCAAGTTTGAGCTTGACAGTGAGCAGGTCCGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
||
| CDS GCA 72 bp | CTGTTGAACGGTGCAAACCTGTGCTCATACCGGACCTaGTCACTGTCAAGCTCAAACTTGGGCTTGCGCACT | + |
|
Preference number: 6 (lower is better) Translates to: LLNGANLCSYRT*SLSSSNLGLRT Trigger: AGTGCGCAAGCCCAAGTTTGAGCTTGACAGTGAGCAGGTCCGGTATGAGCACAGGTTTGCACCGTTCAACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
||
| CDS CAA 90 bp | GCAAACCTGTGCTCATACCGGACCTGCTCACTGTCAAGCTCAAACTaGGGCTTGCGCACTTTGCCATCCATGTCAAAAGCGACCATCGTC | + |
|
Preference number: 6 (lower is better) Translates to: ANLCSYRTCSLSSSN*GLRTLPSMSKATIV Trigger: GACGATGGTCGCTTTTGACATGGATGGCAAAGTGCGCAAGCCCAAGTTTGAGCTTGACAGTGAGCAGGTCCGGTATGAGCACAGGTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
||
| CDS CAA 90 bp | TTACAAATGCTGGGTTCTCTGTATGAAGACTCGGTGCTTTCCTCTTaGGGGGAGAGCACCGGAGGACTGACGAAGGACCGCAGAGCATCT | + |
|
Preference number: 6 (lower is better) Translates to: LQMLGSLYEDSVLSS*GESTGGLTKDRRAS Trigger: AGATGCTCTGCGGTCCTTCGTCAGTCCTCCGGTGCTCTCCCCCAAAGAGGAAAGCACCGAGTCTTCATACAGAGAACCCAGCATTTGTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172166.8 |
||
| CDS TCA 72 bp | TATATAGGCAACACTTGGGGGAGAGCACCGGAGGACTaGCGAAGGACCGCAGAGCATCTTTCACCATGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: YIGNTWGRAPED*RRTAEHLSPCL Trigger: AAGACATGGTGAAAGATGCTCTGCGGTCCTTCGTCAGTCCTCCGGTGCTCTCCCCCAAGTGTTGCCTATATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022038.15 ENSMUST00000165253.2 ENSMUST00000172419.8 |
||
| CDS CCA 72 bp | GCTCATACCGGACCTGCTCACTGTCAAGCTCAAACTTaGGCTTGCGCACTTTGCCATCCATGTCAAAAGCGA | + |
|
Preference number: 6 (lower is better) Translates to: AHTGPAHCQAQT*ACALCHPCQKR Trigger: TCGCTTTTGACATGGATGGCAAAGTGCGCAAGCCCAAGTTTGAGCTTGACAGTGAGCAGGTCCGGTATGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
||
| CDS CCA 72 bp | GTCAGACATTTCCTTGAACTGCAGGTAGTGCACTGGTaGCGGCGTCATCACACTGTTGAACGGTGCAAACCT | + |
|
Preference number: 6 (lower is better) Translates to: VRHFLELQVVHW*RRHHTVERCKP Trigger: AGGTTTGCACCGTTCAACAGTGTGATGACGCCGCCACCAGTGCACTACCTGCAGTTCAAGGAAATGTCTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
||
| CDS CCA 72 bp | GAGGTCAGACATTTCCTTGAACTGCAGGTAGTGCACTaGTGGCGGCGTCATCACACTGTTGAACGGTGCAAA | + |
|
Preference number: 6 (lower is better) Translates to: EVRHFLELQVVH*WRRHHTVERCK Trigger: TTTGCACCGTTCAACAGTGTGATGACGCCGCCACCAGTGCACTACCTGCAGTTCAAGGAAATGTCTGACCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
||
| CDS CAA 72 bp | TACCGGACCTGCTCACTGTCAAGCTCAAACTTGGGCTaGCGCACTTTGCCATCCATGTCAAAAGCGACCATC | + |
|
Preference number: 6 (lower is better) Translates to: YRTCSLSSSNLG*RTLPSMSKATI Trigger: GATGGTCGCTTTTGACATGGATGGCAAAGTGCGCAAGCCCAAGTTTGAGCTTGACAGTGAGCAGGTCCGGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
||
| CDS CAA 72 bp | TGCTCATACCGGACCTGCTCACTGTCAAGCTCAAACTaGGGCTTGCGCACTTTGCCATCCATGTCAAAAGCG | + |
|
Preference number: 6 (lower is better) Translates to: CSYRTCSLSSSN*GLRTLPSMSKA Trigger: CGCTTTTGACATGGATGGCAAAGTGCGCAAGCCCAAGTTTGAGCTTGACAGTGAGCAGGTCCGGTATGAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
||
| CDS CAA 90 bp | TACCGGACCTGCTCACTGTCAAGCTCAAACTTGGGCTTGCGCACTTaGCCATCCATGTCAAAAGCGACCATCGTCTTGAACATCCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: YRTCSLSSSNLGLRT*PSMSKATIVLNIPA Trigger: TGCTGGGATGTTCAAGACGATGGTCGCTTTTGACATGGATGGCAAAGTGCGCAAGCCCAAGTTTGAGCTTGACAGTGAGCAGGTCCGGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
||
| CDS CAA 90 bp | CTGTGCTCATACCGGACCTGCTCACTGTCAAGCTCAAACTTGGGCTaGCGCACTTTGCCATCCATGTCAAAAGCGACCATCGTCTTGAAC | + |
|
Preference number: 6 (lower is better) Translates to: LCSYRTCSLSSSNLG*RTLPSMSKATIVLN Trigger: GTTCAAGACGATGGTCGCTTTTGACATGGATGGCAAAGTGCGCAAGCCCAAGTTTGAGCTTGACAGTGAGCAGGTCCGGTATGAGCACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
||
| CDS CAA 90 bp | CACCGGAGGACTGACGAAGGACCGCAGAGCATCTTTCACCATGTCTaGCATGAGATGAGTGCCAAAGACCTTTTTGTTATCCACGAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: HRRTDEGPQSIFHHV*HEMSAKDLFVIHEE Trigger: TTCCTCGTGGATAACAAAAAGGTCTTTGGCACTCATCTCATGCAAGACATGGTGAAAGATGCTCTGCGGTCCTTCGTCAGTCCTCCGGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022038.15 ENSMUST00000172166.8 ENSMUST00000172419.8 |
||
| CDS CAA 72 bp | TGCTCACTGTCAAGCTCAAACTTGGGCTTGCGCACTTaGCCATCCATGTCAAAAGCGACCATCGTCTTGAAC | + |
|
Preference number: 6 (lower is better) Translates to: CSLSSSNLGLRT*PSMSKATIVLN Trigger: GTTCAAGACGATGGTCGCTTTTGACATGGATGGCAAAGTGCGCAAGCCCAAGTTTGAGCTTGACAGTGAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
||
| CDS CAA 72 bp | CCTCCTGCTAAGAGCTTCATAACCACAAAGTTGGGCTaGGCAACCTTCAGGATTCTACTGACCTCACGGTCT | + |
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Preference number: 6 (lower is better) Translates to: PPAKSFITTKLG*ATFRILLTSRS Trigger: AGACCGTGAGGTCAGTAGAATCCTGAAGGTTGCCAAGCCCAACTTTGTGGTTATGAAGCTCTTAGCAGGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
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| CDS CAA 90 bp | TTTTTGTGTCCTCCTGCTAAGAGCTTCATAACCACAAAGTTGGGCTaGGCAACCTTCAGGATTCTACTGACCTCACGGTCTGGATTGGGG | + |
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Preference number: 6 (lower is better) Translates to: FLCPPAKSFITTKLG*ATFRILLTSRSGLG Trigger: CCCCAATCCAGACCGTGAGGTCAGTAGAATCCTGAAGGTTGCCAAGCCCAACTTTGTGGTTATGAAGCTCTTAGCAGGAGGACACAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
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| CDS TCA 72 bp | TCCCAGCACACATGTTCTGATAGGCCTGGCTCATTGTaGTCTCTCGGCTCAACGGACGAACTTTCTTTTTCT | + |
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Preference number: 6 (lower is better) Translates to: SQHTCSDRPGSL*SLGSTDELSFS Trigger: AGAAAAAGAAAGTTCGTCCGTTGAGCCGAGAGATCACAATGAGCCAGGCCTATCAGAACATGTGTGCTGGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
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| CDS TCA 72 bp | CCACAAAGTTGGGCTTGGCAACCTTCAGGATTCTACTaGCCTCACGGTCTGGATTGGGGATATTTTCAAGGA | + |
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Preference number: 6 (lower is better) Translates to: PQSWAWQPSGFY*PHGLDWGYFQG Trigger: TCCTTGAAAATATCCCCAATCCAGACCGTGAGGTCAGTAGAATCCTGAAGGTTGCCAAGCCCAACTTTGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
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| CDS GCA 72 bp | CTGAGGCTCCTGTTTCAACAACATAGTATGAAGCGCTaGATCAACCTTCTCTGCCTCATCTTGCAAGGTAGC | + |
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Preference number: 6 (lower is better) Translates to: LRLLFQQHSMKR*INLLCLILQGS Trigger: GCTACCTTGCAAGATGAGGCAGAGAAGGTTGATGCAGCGCTTCATACTATGTTGTTGAAACAGGAGCCTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
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| CDS TCA 72 bp | CGAAGGACCGCAGAGCATCTTTCACCATGTCTTGCATaGGATGAGTGCCAAAGACCTTTTTGTTATCCACGA | + |
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Preference number: 6 (lower is better) Translates to: RRTAEHLSPCLA*DECQRPFCYPR Trigger: TCGTGGATAACAAAAAGGTCTTTGGCACTCATCTCATGCAAGACATGGTGAAAGATGCTCTGCGGTCCTTCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022038.15 ENSMUST00000172166.8 ENSMUST00000172419.8 |
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| CDS CCA 72 bp | TCTCTGGTTAACAAGGGGCTCAAAACCCATCATAATTaGATGGTCTCCTTTGGTAGTGCCATTCTGAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: SLVNKGLKTHHN*MVSFGSAILSL Trigger: CAGGCTCAGAATGGCACTACCAAAGGAGACCATCCAATTATGATGGGTTTTGAGCCCCTTGTTAACCAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022038.15 ENSMUST00000172166.8 ENSMUST00000172419.8 |
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| CDS CAA 72 bp | TTGTGTCCTCCTGCTAAGAGCTTCATAACCACAAAGTaGGGCTTGGCAACCTTCAGGATTCTACTGACCTCA | + |
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Preference number: 6 (lower is better) Translates to: LCPPAKSFITTK*GLATFRILLTS Trigger: TGAGGTCAGTAGAATCCTGAAGGTTGCCAAGCCCAACTTTGTGGTTATGAAGCTCTTAGCAGGAGGACACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
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| CDS TCA 72 bp | GACCGCAGAGCATCTTTCACCATGTCTTGCATGAGATaGGTGCCAAAGACCTTTTTGTTATCCACGAGGAAA | + |
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Preference number: 6 (lower is better) Translates to: DRRASFTMSCMR*VPKTFLLSTRK Trigger: TTTCCTCGTGGATAACAAAAAGGTCTTTGGCACTCATCTCATGCAAGACATGGTGAAAGATGCTCTGCGGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022038.15 ENSMUST00000172166.8 ENSMUST00000172419.8 |
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| CDS GCA 72 bp | GGGATTATGAATGTAAAGGCACGTAAACACTGTCTGTaGCAAGGAATGGCCTTCGAGCCATGTGATCAAACA | + |
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Preference number: 6 (lower is better) Translates to: GIMNVKARKHCL*QGMAFEPCDQT Trigger: TGTTTGATCACATGGCTCGAAGGCCATTCCTTGGCACAGACAGTGTTTACGTGCCTTTACATTCATAATCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022038.15 ENSMUST00000164011.8 ENSMUST00000166923.9 ENSMUST00000172419.8 |
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| CDS CAA 72 bp | GAGAAGTCGAATTCGGGAGGAACCTTTGACTCTTTTTaGTGTCCTCCTGCTAAGAGCTTCATAACCACAAAG | + |
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Preference number: 6 (lower is better) Translates to: EKSNSGGTFDSF*CPPAKSFITTK Trigger: CTTTGTGGTTATGAAGCTCTTAGCAGGAGGACACAAAAAAGAGTCAAAGGTTCCTCCCGAATTCGACTTCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022038.15 |
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| CDS CAA 90 bp | TCCACATCCTTTAGCATCCCTGTAACTCGGAGATCTGTCACACTGTaGGCCATTTTAAATCCGTATGTCATTGACTGGAAATCTTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: STSFSIPVTRRSVTL*AILNPYVIDWKSSS Trigger: AGAGGAAGATTTCCAGTCAATGACATACGGATTTAAAATGGCCAACAGTGTGACAGATCTCCGAGTTACAGGGATGCTAAAGGATGTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022038.15 ENSMUST00000164011.8 ENSMUST00000172419.8 |
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| CDS GCA 72 bp | CCTGGTGATTATTATATAGGCAACACGCTTTACAAATaGTGGGTTCTCTGTATGAAGACTCGGTGCTTTCCT | + |
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Preference number: 6 (lower is better) Translates to: PGDYYIGNTLYK*WVLCMKTRCFP Trigger: AGGAAAGCACCGAGTCTTCATACAGAGAACCCAGCATTTGTAAAGCGTGTTGCCTATATAATAATCACCAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172166.8 |
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| CDS TCA 72 bp | TGTCACACTGTTGGCCATTTTAAATCCGTATGTCATTaGCTGGAAATCTTCTTTTTCCCGTGCAATGTCGCA | + |
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Preference number: 6 (lower is better) Translates to: CHTVGHFKSVCH*LEIFFFPCNVA Trigger: TGCGACATTGCACGGGAAAAAGAAGATTTCCAGTCAATGACATACGGATTTAAAATGGCCAACAGTGTGACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166923.9 |
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| CDS GCA 72 bp | CTCTTCGAAAACAGCAGCTTTATTTACTTTTTCCCGTaGAATGTCGCAGATCTTCAAGATTCCCAGAGCAAA | + |
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Preference number: 6 (lower is better) Translates to: LFENSSFIYFFP*NVADLQDSQSK Trigger: TTTGCTCTGGGAATCTTGAAGATCTGCGACATTGCACGGGAAAAAGTAAATAAAGCTGCTGTTTTCGAAGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022038.15 ENSMUST00000164011.8 ENSMUST00000172419.8 |
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| CDS CCA 72 bp | GGTGATTATTATATAGGCAACACGCTTTACAAATGCTaGGTTCTCTGTATGAAGACTCGGTGCTTTCCTCTT | + |
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Preference number: 6 (lower is better) Translates to: GDYYIGNTLYKC*VLCMKTRCFPL Trigger: AAGAGGAAAGCACCGAGTCTTCATACAGAGAACCCAGCATTTGTAAAGCGTGTTGCCTATATAATAATCACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172166.8 |
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| CDS CAA 72 bp | TTTAGCATCCCTGTAACTCGGAGATCTGTCACACTGTaGGCCATTTTAAATCCGTATGTCATTGACTGGAAA | + |
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Preference number: 6 (lower is better) Translates to: FSIPVTRRSVTL*AILNPYVIDWK Trigger: TTTCCAGTCAATGACATACGGATTTAAAATGGCCAACAGTGTGACAGATCTCCGAGTTACAGGGATGCTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022038.15 ENSMUST00000164011.8 ENSMUST00000166923.9 ENSMUST00000172419.8 |
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| CDS CAA 90 bp | GCCATCCTTGATAGCTTGTTCAAAATTGAGAACTTTTCTATTCACTaGGTTCCCGATCATACCGGCATCCATCTTAGGATCCATCATTTC | + |
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Preference number: 6 (lower is better) Translates to: AILDSLFKIENFSIH*VPDHTGIHLRIHHF Trigger: GAAATGATGGATCCTAAGATGGATGCCGGTATGATCGGGAACCAAGTGAATAGAAAAGTTCTCAATTTTGAACAAGCTATCAAGGATGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022038.15 ENSMUST00000166923.9 ENSMUST00000168367.8 ENSMUST00000172419.8 |
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| CDS CAA 90 bp | TCCACATCCTTTAGCATCCCTGTAACTCGGAGATCTGTCACACTGTaGGCCATTTTAAATCCGTATGTCATTGACTGGAAATCTTCTTTT | + |
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Preference number: 6 (lower is better) Translates to: STSFSIPVTRRSVTL*AILNPYVIDWKSSF Trigger: AAAAGAAGATTTCCAGTCAATGACATACGGATTTAAAATGGCCAACAGTGTGACAGATCTCCGAGTTACAGGGATGCTAAAGGATGTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166923.9 |
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| CDS CCA 72 bp | ATAGCTTGTTCAAAATTGAGAACTTTTCTATTCACTTaGTTCCCGATCATACCGGCATCCATCTTAGGATCC | + |
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Preference number: 6 (lower is better) Translates to: IACSKLRTFLFT*FPIIPASILGS Trigger: GGATCCTAAGATGGATGCCGGTATGATCGGGAACCAAGTGAATAGAAAAGTTCTCAATTTTGAACAAGCTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022038.15 ENSMUST00000166923.9 ENSMUST00000168367.8 ENSMUST00000172419.8 |
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| CDS CAA 72 bp | GATAGCTTGTTCAAAATTGAGAACTTTTCTATTCACTaGGTTCCCGATCATACCGGCATCCATCTTAGGATC | + |
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Preference number: 6 (lower is better) Translates to: DSLFKIENFSIH*VPDHTGIHLRI Trigger: GATCCTAAGATGGATGCCGGTATGATCGGGAACCAAGTGAATAGAAAAGTTCTCAATTTTGAACAAGCTATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022038.15 ENSMUST00000166923.9 ENSMUST00000168367.8 ENSMUST00000172419.8 |
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