Pregenerated sensors for NAA30 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036282Ensembl transcript IDs: ENSMUST00000037362.6, ENSMUST00000136995.2, ENSMUST00000153488.9
Found 145 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGCAATTCTGCACAAATTGCATTGCATGCAAAAGTCGCTTCCGTGTaGGTGGAGTCGTTCCTTGCTGTCAGTTCCTCAGCGCAGCCACAG | + |
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Preference number: 1 (lower is better) Translates to: SNSAQIALHAKVASV*VESFLAVSSSAQPQ Trigger: CTGTGGCTGCGCTGAGGAACTGACAGCAAGGAACGACTCCACCCACACGGAAGCGACTTTTGCATGCAATGCAATTTGTGCAGAATTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136995.2 |
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| 3UTR CCA 90 bp | ATTCTGCACAAATTGCATTGCATGCAAAAGTCGCTTCCGTGTGGGTaGAGTCGTTCCTTGCTGTCAGTTCCTCAGCGCAGCCACAGTTTA | + |
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Preference number: 1 (lower is better) Translates to: ILHKLHCMQKSLPCG*SRSLLSVPQRSHSL Trigger: TAAACTGTGGCTGCGCTGAGGAACTGACAGCAAGGAACGACTCCACCCACACGGAAGCGACTTTTGCATGCAATGCAATTTGTGCAGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136995.2 |
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| 3UTR GCA 90 bp | TCACTAAATCCACCTGCAAAGCAATTCTGCACAAATTGCATTGCATaGAAAAGTCGCTTCCGTGTGGGTGGAGTCGTTCCTTGCTGTCAG | + |
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Preference number: 1 (lower is better) Translates to: SLNPPAKQFCTNCIA*KSRFRVGGVVPCCQ Trigger: CTGACAGCAAGGAACGACTCCACCCACACGGAAGCGACTTTTGCATGCAATGCAATTTGTGCAGAATTGCTTTGCAGGTGGATTTAGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037362.6 ENSMUST00000136995.2 ENSMUST00000153488.9 |
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| 3UTR GCA 90 bp | GGAATCACTAAATCCACCTGCAAAGCAATTCTGCACAAATTGCATTaGATGCAAAAGTCGCTTCCGTGTGGGTGGAGTCGTTCCTTGCTG | + |
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Preference number: 1 (lower is better) Translates to: GITKSTCKAILHKLH*MQKSLPCGWSRSLL Trigger: CAGCAAGGAACGACTCCACCCACACGGAAGCGACTTTTGCATGCAATGCAATTTGTGCAGAATTGCTTTGCAGGTGGATTTAGTGATTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037362.6 ENSMUST00000136995.2 ENSMUST00000153488.9 |
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| 3UTR GCA 90 bp | GCATGGGAATCACTAAATCCACCTGCAAAGCAATTCTGCACAAATTaGATTGCATGCAAAAGTCGCTTCCGTGTGGGTGGAGTCGTTCCT | + |
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Preference number: 1 (lower is better) Translates to: AWESLNPPAKQFCTN*IACKSRFRVGGVVP Trigger: AGGAACGACTCCACCCACACGGAAGCGACTTTTGCATGCAATGCAATTTGTGCAGAATTGCTTTGCAGGTGGATTTAGTGATTCCCATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037362.6 ENSMUST00000136995.2 ENSMUST00000153488.9 |
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| 3UTR GCA 90 bp | ATAACAGCTGCATGGGAATCACTAAATCCACCTGCAAAGCAATTCTaGACAAATTGCATTGCATGCAAAAGTCGCTTCCGTGTGGGTGGA | + |
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Preference number: 1 (lower is better) Translates to: ITAAWESLNPPAKQF*TNCIACKSRFRVGG Trigger: TCCACCCACACGGAAGCGACTTTTGCATGCAATGCAATTTGTGCAGAATTGCTTTGCAGGTGGATTTAGTGATTCCCATGCAGCTGTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037362.6 ENSMUST00000136995.2 ENSMUST00000153488.9 |
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| 3UTR CCA 90 bp | CAAATGCGCCATGCCAAAGTGCAACAAATATTGTGCAACACTCAATaGACACTGACAGATAACAGCTGCATGGGAATCACTAAATCCACC | + |
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Preference number: 1 (lower is better) Translates to: QMRHAKVQQILCNTQ*TLTDNSCMGITKST Trigger: GGTGGATTTAGTGATTCCCATGCAGCTGTTATCTGTCAGTGTCCATTGAGTGTTGCACAATATTTGTTGCACTTTGGCATGGCGCATTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037362.6 ENSMUST00000136995.2 ENSMUST00000153488.9 |
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| 3UTR GCA 90 bp | TGGACACTGACAGATAACAGCTGCATGGGAATCACTAAATCCACCTaGAAAGCAATTCTGCACAAATTGCATTGCATGCAAAAGTCGCTT | + |
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Preference number: 1 (lower is better) Translates to: WTLTDNSCMGITKST*KAILHKLHCMQKSL Trigger: AAGCGACTTTTGCATGCAATGCAATTTGTGCAGAATTGCTTTGCAGGTGGATTTAGTGATTCCCATGCAGCTGTTATCTGTCAGTGTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037362.6 ENSMUST00000136995.2 ENSMUST00000153488.9 |
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| 3UTR CCA 90 bp | GCACTGTCAGCAGACTTTGCAAATGAACAAGTCTTGGCTATTAACTaGCACATCCTGCTGGTACCAACAGAACTCTTGAAGTTTAAAACA | + |
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Preference number: 1 (lower is better) Translates to: ALSADFANEQVLAIN*HILLVPTELLKFKT Trigger: TGTTTTAAACTTCAAGAGTTCTGTTGGTACCAGCAGGATGTGCCAGTTAATAGCCAAGACTTGTTCATTTGCAAAGTCTGCTGACAGTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
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| 3UTR GCA 90 bp | TTTAATTCAGAACAAATGCGCCATGCCAAAGTGCAACAAATATTGTaGAACACTCAATGGACACTGACAGATAACAGCTGCATGGGAATC | + |
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Preference number: 1 (lower is better) Translates to: FNSEQMRHAKVQQIL*NTQWTLTDNSCMGI Trigger: GATTCCCATGCAGCTGTTATCTGTCAGTGTCCATTGAGTGTTGCACAATATTTGTTGCACTTTGGCATGGCGCATTTGTTCTGAATTAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037362.6 ENSMUST00000136995.2 ENSMUST00000153488.9 |
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| 3UTR TCA 90 bp | TCCTCAACAAGTCATCCCTATGTACCAGCAAATCAAAACAACTTTTaGCGATGTCAAGTACACTGTTTAGCTACTTTCCTTCACACTGAA | + |
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Preference number: 1 (lower is better) Translates to: SSTSHPYVPANQNNF*RCQVHCLATFLHTE Trigger: TTCAGTGTGAAGGAAAGTAGCTAAACAGTGTACTTGACATCGTCAAAAGTTGTTTTGATTTGCTGGTACATAGGGATGACTTGTTGAGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
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| 3UTR CAA 90 bp | TTGCATTGCATGCAAAAGTCGCTTCCGTGTGGGTGGAGTCGTTCCTaGCTGTCAGTTCCTCAGCGCAGCCACAGTTTAAGTCGCAGTGCG | + |
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Preference number: 2 (lower is better) Translates to: LHCMQKSLPCGWSRS*LSVPQRSHSLSRSA Trigger: CGCACTGCGACTTAAACTGTGGCTGCGCTGAGGAACTGACAGCAAGGAACGACTCCACCCACACGGAAGCGACTTTTGCATGCAATGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136995.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGCAAAGCAATTCTGCACAAATTGCATTGCATGCAAAAGTCGCTTCCGTGTGTCGCTTCCGTGTGGGTaGAGTCGTTCCTTGCTGTCA | + |
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Preference number: 2 (lower is better) Translates to: PAKQFCTNCIACKSRFRVSLPCG*SRSLLS Trigger: TGACAGCAAGGAACGACTCCACCCACACGGAAGCGA...CACACGGAAGCGACTTTTGCATGCAATGCAATTTGTGCAGAATTGCTTTGCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037362.6 ENSMUST00000136995.2 ENSMUST00000153488.9 |
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| 3UTR-3UTR GCA 90 bp | TCCGTGTGGGTGGAGTCGTTCCTTGCTGTCAGTTCCTCAGCGCAGCCACAGTTTATCACTAAATCCACCTaGAAAGCAATTCTGCACAAA | + |
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Preference number: 2 (lower is better) Translates to: SVWVESFLAVSSSAQPQFITKST*KAILHK Trigger: TTTGTGCAGAATTGCTTTGCAGGTGGATTTAGTGAT...AAACTGTGGCTGCGCTGAGGAACTGACAGCAAGGAACGACTCCACCCACACGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136995.2 |
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| 3UTR-3UTR CCA 90 bp | CTGCTAAACCAGTGTCAGTGGATAGATAGTACAGTCAGTCTTAAAGAGGCAGCATCGCTTCCGTGTGGGTaGAGTCGTTCCTTGCTGTCA | + |
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Preference number: 2 (lower is better) Translates to: LLNQCQWIDSTVSLKEAASLPCG*SRSLLS Trigger: TGACAGCAAGGAACGACTCCACCCACACGGAAGCGA...TGCTGCCTCTTTAAGACTGACTGTACTATCTATCCACTGACACTGGTTTAGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
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| 3UTR CAA 90 bp | TGCATGGGAATCACTAAATCCACCTGCAAAGCAATTCTGCACAAATaGCATTGCATGCAAAAGTCGCTTCCGTGTGGGTGGAGTCGTTCC | + |
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Preference number: 2 (lower is better) Translates to: CMGITKSTCKAILHK*HCMQKSLPCGWSRS Trigger: GGAACGACTCCACCCACACGGAAGCGACTTTTGCATGCAATGCAATTTGTGCAGAATTGCTTTGCAGGTGGATTTAGTGATTCCCATGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037362.6 ENSMUST00000136995.2 ENSMUST00000153488.9 |
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| 3UTR-3UTR CCA 90 bp | CAGCTCCATCCCTTTAAGCCATTTCTCAGTTTCCCAAGTAGGGTCAGCTTCTTAGTCTTGGCTATTAACTaGCACATCCTGCTGGTACCA | + |
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Preference number: 2 (lower is better) Translates to: QLHPFKPFLSFPSRVSFLVLAIN*HILLVP Trigger: TGGTACCAGCAGGATGTGCCAGTTAATAGCCAAGAC...TAAGAAGCTGACCCTACTTGGGAAACTGAGAAATGGCTTAAAGGGATGGAGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
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| 3UTR-3UTR TCA 90 bp | AACAGCTGCATGGGAATCACTAAATCCACCTGCAAAGCAATTCTGCACAAATTGACACTCAATGGACACTaGCAGATAACAGCTGCATGG | + |
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Preference number: 2 (lower is better) Translates to: NSCMGITKSTCKAILHKLTLNGH*QITAAW Trigger: CCATGCAGCTGTTATCTGTCAGTGTCCATTGAGTGT...CAATTTGTGCAGAATTGCTTTGCAGGTGGATTTAGTGATTCCCATGCAGCTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037362.6 ENSMUST00000136995.2 ENSMUST00000153488.9 |
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| 3UTR-3UTR GCA 90 bp | CTGCTAAACCAGTGTCAGTGGATAGATAGTACAGTCAGTCTTAAAGAGGCAGCACTGCACAAATTGCATTaGATGCAAAAGTCGCTTCCG | + |
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Preference number: 2 (lower is better) Translates to: LLNQCQWIDSTVSLKEAALHKLH*MQKSLP Trigger: CGGAAGCGACTTTTGCATGCAATGCAATTTGTGCAG...TGCTGCCTCTTTAAGACTGACTGTACTATCTATCCACTGACACTGGTTTAGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
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| 3UTR-3UTR GCA 90 bp | CCTGCAAAGCAATTCTGCACAAATTGCATTGCATGCAAAAGTCGCTTCCGTGTGTGCGCCATGCCAAAGTaGAACAAATATTGTGCAACA | + |
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Preference number: 2 (lower is better) Translates to: PAKQFCTNCIACKSRFRVCAMPK*NKYCAT Trigger: TGTTGCACAATATTTGTTGCACTTTGGCATGGCGCA...CACACGGAAGCGACTTTTGCATGCAATGCAATTTGTGCAGAATTGCTTTGCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037362.6 ENSMUST00000136995.2 ENSMUST00000153488.9 |
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| 3UTR-3UTR CCA 90 bp | CCTGCAAAGCAATTCTGCACAAATTGCATTGCATGCAAAAGTCGCTTCCGTGTGTTGTGCAACACTCAATaGACACTGACAGATAACAGC | + |
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Preference number: 2 (lower is better) Translates to: PAKQFCTNCIACKSRFRVLCNTQ*TLTDNS Trigger: GCTGTTATCTGTCAGTGTCCATTGAGTGTTGCACAA...CACACGGAAGCGACTTTTGCATGCAATGCAATTTGTGCAGAATTGCTTTGCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037362.6 ENSMUST00000136995.2 ENSMUST00000153488.9 |
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| 3UTR-3UTR GCA 90 bp | ATCCACCTGCAAAGCAATTCTGCACAAATTGCATTGCATGCAAAAGTCGCTTCCTGCGCCATGCCAAAGTaGAACAAATATTGTGCAACA | + |
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Preference number: 2 (lower is better) Translates to: IHLQSNSAQIALHAKVASCAMPK*NKYCAT Trigger: TGTTGCACAATATTTGTTGCACTTTGGCATGGCGCA...GGAAGCGACTTTTGCATGCAATGCAATTTGTGCAGAATTGCTTTGCAGGTGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037362.6 ENSMUST00000136995.2 ENSMUST00000153488.9 |
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| 3UTR-3UTR TCA 90 bp | ATTCAGAACAAATGCGCCATGCCAAAGTGCAACAAATATTGTGCAACACTCAATACACTCAATGGACACTaGCAGATAACAGCTGCATGG | + |
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Preference number: 2 (lower is better) Translates to: IQNKCAMPKCNKYCATLNTLNGH*QITAAW Trigger: CCATGCAGCTGTTATCTGTCAGTGTCCATTGAGTGT...ATTGAGTGTTGCACAATATTTGTTGCACTTTGGCATGGCGCATTTGTTCTGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037362.6 ENSMUST00000136995.2 ENSMUST00000153488.9 |
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| 3UTR-3UTR TCA 90 bp | AGACAAATTCCACCCTACACTTTTCATCCACTAATCACTGAGGTACCAATATTCACACTCAATGGACACTaGCAGATAACAGCTGCATGG | + |
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Preference number: 2 (lower is better) Translates to: RQIPPYTFHPLITEVPIFTLNGH*QITAAW Trigger: CCATGCAGCTGTTATCTGTCAGTGTCCATTGAGTGT...GAATATTGGTACCTCAGTGATTAGTGGATGAAAAGTGTAGGGTGGAATTTGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
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| 3UTR-3UTR GCA 90 bp | CAGAACAAATGCGCCATGCCAAAGTGCAACAAATATTGTGCAACACTCAATGGAACAAATTGCATTGCATaGAAAAGTCGCTTCCGTGTG | + |
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Preference number: 2 (lower is better) Translates to: QNKCAMPKCNKYCATLNGTNCIA*KSRFRV Trigger: CACACGGAAGCGACTTTTGCATGCAATGCAATTTGT...TCCATTGAGTGTTGCACAATATTTGTTGCACTTTGGCATGGCGCATTTGTTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037362.6 ENSMUST00000136995.2 ENSMUST00000153488.9 |
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| 3UTR-3UTR GCA 90 bp | ACTAAATCCACCTGCAAAGCAATTCTGCACAAATTGCATTGCATGCAAAAGTCGCTGCACAAATTGCATTaGATGCAAAAGTCGCTTCCG | + |
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Preference number: 2 (lower is better) Translates to: TKSTCKAILHKLHCMQKSLHKLH*MQKSLP Trigger: CGGAAGCGACTTTTGCATGCAATGCAATTTGTGCAG...CGACTTTTGCATGCAATGCAATTTGTGCAGAATTGCTTTGCAGGTGGATTTAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037362.6 ENSMUST00000136995.2 ENSMUST00000153488.9 |
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| 3UTR-3UTR GCA 90 bp | ACTAAATCCACCTGCAAAGCAATTCTGCACAAATTGCATTGCATGCAAAAGTCGACAAATTGCATTGCATaGAAAAGTCGCTTCCGTGTG | + |
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Preference number: 2 (lower is better) Translates to: TKSTCKAILHKLHCMQKSTNCIA*KSRFRV Trigger: CACACGGAAGCGACTTTTGCATGCAATGCAATTTGT...CGACTTTTGCATGCAATGCAATTTGTGCAGAATTGCTTTGCAGGTGGATTTAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037362.6 ENSMUST00000136995.2 ENSMUST00000153488.9 |
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| 3UTR-3UTR GCA 90 bp | AACAGCTGCATGGGAATCACTAAATCCACCTGCAAAGCAATTCTGCACAAATTGGTGCAACAAATATTGTaGAACACTCAATGGACACTG | + |
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Preference number: 2 (lower is better) Translates to: NSCMGITKSTCKAILHKLVQQIL*NTQWTL Trigger: CAGTGTCCATTGAGTGTTGCACAATATTTGTTGCAC...CAATTTGTGCAGAATTGCTTTGCAGGTGGATTTAGTGATTCCCATGCAGCTGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037362.6 ENSMUST00000136995.2 ENSMUST00000153488.9 |
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| 3UTR-3UTR GCA 90 bp | ACTAAATCCACCTGCAAAGCAATTCTGCACAAATTGCATTGCATGCAAAAGTCGTGCGCCATGCCAAAGTaGAACAAATATTGTGCAACA | + |
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Preference number: 2 (lower is better) Translates to: TKSTCKAILHKLHCMQKSCAMPK*NKYCAT Trigger: TGTTGCACAATATTTGTTGCACTTTGGCATGGCGCA...CGACTTTTGCATGCAATGCAATTTGTGCAGAATTGCTTTGCAGGTGGATTTAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037362.6 ENSMUST00000136995.2 ENSMUST00000153488.9 |
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| 3UTR-3UTR GCA 90 bp | CTAAATCCACCTGCAAAGCAATTCTGCACAAATTGCATTGCATGCAAAAGTCGCTTAATTCAGAACAAATaGGCCATGCCAAAGTGCAAC | + |
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Preference number: 2 (lower is better) Translates to: LNPPAKQFCTNCIACKSRLIQNK*AMPKCN Trigger: GTTGCACTTTGGCATGGCGCATTTGTTCTGAATTAA...GCGACTTTTGCATGCAATGCAATTTGTGCAGAATTGCTTTGCAGGTGGATTTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037362.6 ENSMUST00000136995.2 ENSMUST00000153488.9 |
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| 3UTR-3UTR GCA 90 bp | TTAATTCAGAACAAATGCGCCATGCCAAAGTGCAACAAATATTGTGCAACACTCTTAACTGGCACATCCTaGTGGTACCAACAGAACTCT | + |
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Preference number: 2 (lower is better) Translates to: LIQNKCAMPKCNKYCATLLTGTS*WYQQNS Trigger: AGAGTTCTGTTGGTACCAGCAGGATGTGCCAGTTAA...GAGTGTTGCACAATATTTGTTGCACTTTGGCATGGCGCATTTGTTCTGAATTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
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| 3UTR-3UTR CCA 90 bp | ACTAAATCCACCTGCAAAGCAATTCTGCACAAATTGCATTGCATGCAAAAGTCGCAGATAACAGCTGCATaGGAATCACTAAATCCACCT | + |
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Preference number: 2 (lower is better) Translates to: TKSTCKAILHKLHCMQKSQITAA*ESLNPP Trigger: AGGTGGATTTAGTGATTCCCATGCAGCTGTTATCTG...CGACTTTTGCATGCAATGCAATTTGTGCAGAATTGCTTTGCAGGTGGATTTAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037362.6 ENSMUST00000136995.2 ENSMUST00000153488.9 |
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| 3UTR-3UTR GCA 90 bp | TTAATTCAGAACAAATGCGCCATGCCAAAGTGCAACAAATATTGTGCAACACTCACAAATTGCATTGCATaGAAAAGTCGCTTCCGTGTG | + |
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Preference number: 2 (lower is better) Translates to: LIQNKCAMPKCNKYCATLTNCIA*KSRFRV Trigger: CACACGGAAGCGACTTTTGCATGCAATGCAATTTGT...GAGTGTTGCACAATATTTGTTGCACTTTGGCATGGCGCATTTGTTCTGAATTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037362.6 ENSMUST00000136995.2 ENSMUST00000153488.9 |
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| 3UTR-3UTR GCA 90 bp | ACTAAATCCACCTGCAAAGCAATTCTGCACAAATTGCATTGCATGCAAAAGTCGCAATTCTGCACAAATTaGATTGCATGCAAAAGTCGC | + |
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Preference number: 2 (lower is better) Translates to: TKSTCKAILHKLHCMQKSQFCTN*IACKSR Trigger: GCGACTTTTGCATGCAATGCAATTTGTGCAGAATTG...CGACTTTTGCATGCAATGCAATTTGTGCAGAATTGCTTTGCAGGTGGATTTAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037362.6 ENSMUST00000136995.2 ENSMUST00000153488.9 |
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| 3UTR-3UTR GCA 90 bp | CTAAATCCACCTGCAAAGCAATTCTGCACAAATTGCATTGCATGCAAAAGTCGCATCACTAAATCCACCTaGAAAGCAATTCTGCACAAA | + |
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Preference number: 2 (lower is better) Translates to: LNPPAKQFCTNCIACKSRITKST*KAILHK Trigger: TTTGTGCAGAATTGCTTTGCAGGTGGATTTAGTGAT...GCGACTTTTGCATGCAATGCAATTTGTGCAGAATTGCTTTGCAGGTGGATTTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037362.6 ENSMUST00000136995.2 ENSMUST00000153488.9 |
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| 3UTR-3UTR TCA 90 bp | CATCAGACAATCAGTTACTTCAGCAATTCTGAACTGAAGGGTAGTAGTGATACTTCCAAAATACTATACTaGGCAAAGAGCAGCTTTCCT | + |
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Preference number: 2 (lower is better) Translates to: HQTISYFSNSELKGSSDTSKILY*AKSSFP Trigger: AGGAAAGCTGCTCTTTGCTCAGTATAGTATTTTGGA...AGTATCACTACTACCCTTCAGTTCAGAATTGCTGAAGTAACTGATTGTCTGATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
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| 3UTR-3UTR GCA 90 bp | AGACAAATTCCACCCTACACTTTTCATCCACTAATCACTGAGGTACCAATATTCGTGCAACAAATATTGTaGAACACTCAATGGACACTG | + |
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Preference number: 2 (lower is better) Translates to: RQIPPYTFHPLITEVPIFVQQIL*NTQWTL Trigger: CAGTGTCCATTGAGTGTTGCACAATATTTGTTGCAC...GAATATTGGTACCTCAGTGATTAGTGGATGAAAAGTGTAGGGTGGAATTTGTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
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| 3UTR-3UTR GCA 90 bp | CAATCTCATTTAATTCAGAACAAATGCGCCATGCCAAAGTGCAACAAATATTGTTTAACTGGCACATCCTaGTGGTACCAACAGAACTCT | + |
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Preference number: 2 (lower is better) Translates to: QSHLIQNKCAMPKCNKYCLTGTS*WYQQNS Trigger: AGAGTTCTGTTGGTACCAGCAGGATGTGCCAGTTAA...ACAATATTTGTTGCACTTTGGCATGGCGCATTTGTTCTGAATTAAATGAGATTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
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| 3UTR-3UTR CCA 90 bp | ATCTCATTTAATTCAGAACAAATGCGCCATGCCAAAGTGCAACAAATATTGTGCCAGATAACAGCTGCATaGGAATCACTAAATCCACCT | + |
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Preference number: 2 (lower is better) Translates to: ISFNSEQMRHAKVQQILCQITAA*ESLNPP Trigger: AGGTGGATTTAGTGATTCCCATGCAGCTGTTATCTG...GCACAATATTTGTTGCACTTTGGCATGGCGCATTTGTTCTGAATTAAATGAGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037362.6 ENSMUST00000136995.2 ENSMUST00000153488.9 |
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| 3UTR-3UTR CCA 90 bp | TGCATTCAAAAACTAGAGATGAAGACAAGAATACTTATCTACACAGGCACTGGCCAAATGAACAAGTCTTaGCTATTAACTGGCACATCC | + |
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Preference number: 2 (lower is better) Translates to: CIQKLEMKTRILIYTGTGQMNKS*LLTGTS Trigger: GGATGTGCCAGTTAATAGCCAAGACTTGTTCATTTG...GCCAGTGCCTGTGTAGATAAGTATTCTTGTCTTCATCTCTAGTTTTTGAATGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
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| 3UTR-3UTR CCA 90 bp | CATCAGACAATCAGTTACTTCAGCAATTCTGAACTGAAGGGTAGTAGTGATACTTATCTACACAGGCACTaGCAGACGCAATTTAATTGT | + |
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Preference number: 2 (lower is better) Translates to: HQTISYFSNSELKGSSDTYLHRH*QTQFNC Trigger: ACAATTAAATTGCGTCTGCCAGTGCCTGTGTAGATA...AGTATCACTACTACCCTTCAGTTCAGAATTGCTGAAGTAACTGATTGTCTGATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
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| 3UTR-3UTR TCA 90 bp | TGCATTCAAAAACTAGAGATGAAGACAAGAATACTTATCTACACAGGCACTGGCTCATCCACTAATCACTaGGGTACCAATATTCAAGAT | + |
|
Preference number: 2 (lower is better) Translates to: CIQKLEMKTRILIYTGTGSSTNH*GTNIQD Trigger: ATCTTGAATATTGGTACCTCAGTGATTAGTGGATGA...GCCAGTGCCTGTGTAGATAAGTATTCTTGTCTTCATCTCTAGTTTTTGAATGCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
||
| 3UTR-3UTR GCA 90 bp | ATCTCATTTAATTCAGAACAAATGCGCCATGCCAAAGTGCAACAAATATTGTGCCAATTCTGCACAAATTaGATTGCATGCAAAAGTCGC | + |
|
Preference number: 2 (lower is better) Translates to: ISFNSEQMRHAKVQQILCQFCTN*IACKSR Trigger: GCGACTTTTGCATGCAATGCAATTTGTGCAGAATTG...GCACAATATTTGTTGCACTTTGGCATGGCGCATTTGTTCTGAATTAAATGAGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037362.6 ENSMUST00000136995.2 ENSMUST00000153488.9 |
||
| 3UTR-3UTR GCA 90 bp | AGACAAATTCCACCCTACACTTTTCATCCACTAATCACTGAGGTACCAATATTCATCACTAAATCCACCTaGAAAGCAATTCTGCACAAA | + |
|
Preference number: 2 (lower is better) Translates to: RQIPPYTFHPLITEVPIFITKST*KAILHK Trigger: TTTGTGCAGAATTGCTTTGCAGGTGGATTTAGTGAT...GAATATTGGTACCTCAGTGATTAGTGGATGAAAAGTGTAGGGTGGAATTTGTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
||
| 3UTR-3UTR GCA 90 bp | ATCTCATTTAATTCAGAACAAATGCGCCATGCCAAAGTGCAACAAATATTGTGCGTGCAACAAATATTGTaGAACACTCAATGGACACTG | + |
|
Preference number: 2 (lower is better) Translates to: ISFNSEQMRHAKVQQILCVQQIL*NTQWTL Trigger: CAGTGTCCATTGAGTGTTGCACAATATTTGTTGCAC...GCACAATATTTGTTGCACTTTGGCATGGCGCATTTGTTCTGAATTAAATGAGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037362.6 ENSMUST00000136995.2 ENSMUST00000153488.9 |
||
| 3UTR-3UTR GCA 90 bp | ATCTCATTTAATTCAGAACAAATGCGCCATGCCAAAGTGCAACAAATATTGTGCTTAATTCAGAACAAATaGGCCATGCCAAAGTGCAAC | + |
|
Preference number: 2 (lower is better) Translates to: ISFNSEQMRHAKVQQILCLIQNK*AMPKCN Trigger: GTTGCACTTTGGCATGGCGCATTTGTTCTGAATTAA...GCACAATATTTGTTGCACTTTGGCATGGCGCATTTGTTCTGAATTAAATGAGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037362.6 ENSMUST00000136995.2 ENSMUST00000153488.9 |
||
| 3UTR-3UTR CCA 90 bp | ATCTCATTTAATTCAGAACAAATGCGCCATGCCAAAGTGCAACAAATATTGTGCCAAATGAACAAGTCTTaGCTATTAACTGGCACATCC | + |
|
Preference number: 2 (lower is better) Translates to: ISFNSEQMRHAKVQQILCQMNKS*LLTGTS Trigger: GGATGTGCCAGTTAATAGCCAAGACTTGTTCATTTG...GCACAATATTTGTTGCACTTTGGCATGGCGCATTTGTTCTGAATTAAATGAGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
||
| 3UTR CCA 72 bp | GCACAAATTGCATTGCATGCAAAAGTCGCTTCCGTGTaGGTGGAGTCGTTCCTTGCTGTCAGTTCCTCAGCG | + |
|
Preference number: 3 (lower is better) Translates to: AQIALHAKVASV*VESFLAVSSSA Trigger: CGCTGAGGAACTGACAGCAAGGAACGACTCCACCCACACGGAAGCGACTTTTGCATGCAATGCAATTTGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136995.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGTCGCTTCCGTGTGGGTGGAGTCGTTCCTTGCTGTCAGTTCCTCAGCGCAGCGCAATTCTGCACAAATaGCATTGCATGCAAAAGTCG | + |
|
Preference number: 3 (lower is better) Translates to: KSLPCGWSRSLLSVPQRSAILHK*HCMQKS Trigger: CGACTTTTGCATGCAATGCAATTTGTGCAGAATTGC...GCTGCGCTGAGGAACTGACAGCAAGGAACGACTCCACCCACACGGAAGCGACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136995.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTGCAAAGCAATTCTGCACAAATTGCATTGCATGCAAAAGTCGCTTCCGTGTGTCTGCACAAATTGCATaGCATGCAAAAGTCGCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: PAKQFCTNCIACKSRFRVSAQIA*HAKVAS Trigger: GGAAGCGACTTTTGCATGCAATGCAATTTGTGCAGA...CACACGGAAGCGACTTTTGCATGCAATGCAATTTGTGCAGAATTGCTTTGCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037362.6 ENSMUST00000136995.2 ENSMUST00000153488.9 |
||
| 3UTR-3UTR CAA 90 bp | CAGCTCCATCCCTTTAAGCCATTTCTCAGTTTCCCAAGTAGGGTCAGCTTCTTATCTGCACAAATTGCATaGCATGCAAAAGTCGCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: QLHPFKPFLSFPSRVSFLSAQIA*HAKVAS Trigger: GGAAGCGACTTTTGCATGCAATGCAATTTGTGCAGA...TAAGAAGCTGACCCTACTTGGGAAACTGAGAAATGGCTTAAAGGGATGGAGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
||
| 3UTR GCA 72 bp | TCACTAAATCCACCTGCAAAGCAATTCTGCACAAATTaGATTGCATGCAAAAGTCGCTTCCGTGTGGGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: SLNPPAKQFCTN*IACKSRFRVGG Trigger: TCCACCCACACGGAAGCGACTTTTGCATGCAATGCAATTTGTGCAGAATTGCTTTGCAGGTGGATTTAGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037362.6 ENSMUST00000136995.2 ENSMUST00000153488.9 |
||
| 3UTR-3UTR CAA 90 bp | CCTGCAAAGCAATTCTGCACAAATTGCATTGCATGCAAAAGTCGCTTCCGTGTGGCAATTCTGCACAAATaGCATTGCATGCAAAAGTCG | + |
|
Preference number: 3 (lower is better) Translates to: PAKQFCTNCIACKSRFRVAILHK*HCMQKS Trigger: CGACTTTTGCATGCAATGCAATTTGTGCAGAATTGC...CACACGGAAGCGACTTTTGCATGCAATGCAATTTGTGCAGAATTGCTTTGCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037362.6 ENSMUST00000136995.2 ENSMUST00000153488.9 |
||
| 3UTR CCA 72 bp | GCAGACTTTGCAAATGAACAAGTCTTGGCTATTAACTaGCACATCCTGCTGGTACCAACAGAACTCTTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: ADFANEQVLAIN*HILLVPTELLK Trigger: CTTCAAGAGTTCTGTTGGTACCAGCAGGATGTGCCAGTTAATAGCCAAGACTTGTTCATTTGCAAAGTCTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
||
| 3UTR-3UTR CAA 90 bp | CAGAACAAATGCGCCATGCCAAAGTGCAACAAATATTGTGCAACACTCAATGGAGCAATTCTGCACAAATaGCATTGCATGCAAAAGTCG | + |
|
Preference number: 3 (lower is better) Translates to: QNKCAMPKCNKYCATLNGAILHK*HCMQKS Trigger: CGACTTTTGCATGCAATGCAATTTGTGCAGAATTGC...TCCATTGAGTGTTGCACAATATTTGTTGCACTTTGGCATGGCGCATTTGTTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037362.6 ENSMUST00000136995.2 ENSMUST00000153488.9 |
||
| 3UTR-3UTR CAA 90 bp | CAGAACAAATGCGCCATGCCAAAGTGCAACAAATATTGTGCAACACTCAATGGAGCAAATGAACAAGTCTaGGCTATTAACTGGCACATC | + |
|
Preference number: 3 (lower is better) Translates to: QNKCAMPKCNKYCATLNGANEQV*AINWHI Trigger: GATGTGCCAGTTAATAGCCAAGACTTGTTCATTTGC...TCCATTGAGTGTTGCACAATATTTGTTGCACTTTGGCATGGCGCATTTGTTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
||
| 3UTR GCA 72 bp | ACAGATAACAGCTGCATGGGAATCACTAAATCCACCTaGAAAGCAATTCTGCACAAATTGCATTGCATGCAA | + |
|
Preference number: 3 (lower is better) Translates to: TDNSCMGITKST*KAILHKLHCMQ Trigger: TTGCATGCAATGCAATTTGTGCAGAATTGCTTTGCAGGTGGATTTAGTGATTCCCATGCAGCTGTTATCTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037362.6 ENSMUST00000136995.2 ENSMUST00000153488.9 |
||
| 3UTR CCA 72 bp | AATGTTCAGCAGTATCAACTGCTAAACCAGTGTCAGTaGATAGATAGTACAGTCAGTCTTAAAGAGGCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: NVQQYQLLNQCQ*IDSTVSLKEAA Trigger: TGCTGCCTCTTTAAGACTGACTGTACTATCTATCCACTGACACTGGTTTAGCAGTTGATACTGCTGAACATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
||
| 3UTR TCA 72 bp | AGTCATCCCTATGTACCAGCAAATCAAAACAACTTTTaGCGATGTCAAGTACACTGTTTAGCTACTTTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: SHPYVPANQNNF*RCQVHCLATFL Trigger: AAGGAAAGTAGCTAAACAGTGTACTTGACATCGTCAAAAGTTGTTTTGATTTGCTGGTACATAGGGATGACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
||
| 3UTR CCA 72 bp | AGAGATGAAGACAAGAATACTTATCTACACAGGCACTaGCAGACGCAATTTAATTGTCATCTTTACTCATCA | + |
|
Preference number: 3 (lower is better) Translates to: RDEDKNTYLHRH*QTQFNCHLYSS Trigger: TGATGAGTAAAGATGACAATTAAATTGCGTCTGCCAGTGCCTGTGTAGATAAGTATTCTTGTCTTCATCTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
||
| CDS-3UTR TCA 90 bp | AATCCACCTGCAAAGCAATTCTGCACAAATTGCATTGCATGCAAAAGTCGCTTCCGCCGCCGCTGCCTCTaGCCGGCCGGGGAGTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: NPPAKQFCTNCIACKSRFRRRCL*PAGECS Trigger: ACTGCACTCCCCGGCCGGTCAGAGGCAGCGGCGGCG...GAAGCGACTTTTGCATGCAATGCAATTTGTGCAGAATTGCTTTGCAGGTGGATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
||
| CDS-3UTR GCA 90 bp | CAGCTCCATCCCTTTAAGCCATTTCTCAGTTTCCCAAGTAGGGTCAGCTTCTTACCGCAGCCGCCTTCGTaGTCCTCGTCGTCCTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: QLHPFKPFLSFPSRVSFLPQPPS*SSSSSS Trigger: CGAGGAGGACGACGAGGAGCACGAAGGCGGCTGCGG...TAAGAAGCTGACCCTACTTGGGAAACTGAGAAATGGCTTAAAGGGATGGAGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
||
| CDS-3UTR TCA 90 bp | AGACAAATTCCACCCTACACTTTTCATCCACTAATCACTGAGGTACCAATATTCCGCCGCCGCTGCCTCTaGCCGGCCGGGGAGTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RQIPPYTFHPLITEVPIFRRRCL*PAGECS Trigger: ACTGCACTCCCCGGCCGGTCAGAGGCAGCGGCGGCG...GAATATTGGTACCTCAGTGATTAGTGGATGAAAAGTGTAGGGTGGAATTTGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
||
| CDS-3UTR CCA 90 bp | AACAGCTGCATGGGAATCACTAAATCCACCTGCAAAGCAATTCTGCACAAATTGGGCCGCAGGCGCTGGTaGTGGGAGGAGGCTGCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: NSCMGITKSTCKAILHKLGRRRW*WEEAAR Trigger: CCTAGCAGCCTCCTCCCACCACCAGCGCCTGCGGCC...CAATTTGTGCAGAATTGCTTTGCAGGTGGATTTAGTGATTCCCATGCAGCTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
||
| CDS-3UTR CCA 90 bp | AATCCACCTGCAAAGCAATTCTGCACAAATTGCATTGCATGCAAAAGTCGCTTCTGGGGCCGCAGGCGCTaGTGGTGGGAGGAGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: NPPAKQFCTNCIACKSRFWGRRR*WWEEAA Trigger: AGCAGCCTCCTCCCACCACCAGCGCCTGCGGCCCCA...GAAGCGACTTTTGCATGCAATGCAATTTGTGCAGAATTGCTTTGCAGGTGGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
||
| CDS-3UTR GCA 90 bp | CTAAATCCACCTGCAAAGCAATTCTGCACAAATTGCATTGCATGCAAAAGTCGCCCGCAGCCGCCTTCGTaGTCCTCGTCGTCCTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LNPPAKQFCTNCIACKSRPQPPS*SSSSSS Trigger: CGAGGAGGACGACGAGGAGCACGAAGGCGGCTGCGG...GCGACTTTTGCATGCAATGCAATTTGTGCAGAATTGCTTTGCAGGTGGATTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
||
| CDS-3UTR GCA 90 bp | CATCAGACAATCAGTTACTTCAGCAATTCTGAACTGAAGGGTAGTAGTGATACTCCTCCTCGTCCTCGCTaGAGCAAGCGAGCGCGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: HQTISYFSNSELKGSSDTPPRPR*SKRARP Trigger: GGGCCGCGCTCGCTTGCTGCAGCGAGGACGAGGAGG...AGTATCACTACTACCCTTCAGTTCAGAATTGCTGAAGTAACTGATTGTCTGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
||
| CDS-3UTR GCA 90 bp | ATCTCATTTAATTCAGAACAAATGCGCCATGCCAAAGTGCAACAAATATTGTGCCCTCCTCGTCCTCGCTaGAGCAAGCGAGCGCGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: ISFNSEQMRHAKVQQILCPPRPR*SKRARP Trigger: GGGCCGCGCTCGCTTGCTGCAGCGAGGACGAGGAGG...GCACAATATTTGTTGCACTTTGGCATGGCGCATTTGTTCTGAATTAAATGAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
||
| CDS-3UTR GCA 90 bp | CCTGCAAAGCAATTCTGCACAAATTGCATTGCATGCAAAAGTCGCTTCCGTGTGATCAAGCCGTTGAGCTaGTGCTGCTGCTGCTCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: PAKQFCTNCIACKSRFRVIKPLS*CCCCSG Trigger: TCCGGAGCAGCAGCAGCAGCAGCTCAACGGCTTGAT...CACACGGAAGCGACTTTTGCATGCAATGCAATTTGTGCAGAATTGCTTTGCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
||
| CDS-3UTR GCA 90 bp | AACAGCTGCATGGGAATCACTAAATCCACCTGCAAAGCAATTCTGCACAAATTGGACAGCAGCCGCACCTaGTCGTCCATCTCCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NSCMGITKSTCKAILHKLDSSRT*SSISSS Trigger: GGAGGAGGAGATGGACGAGCAGGTGCGGCTGCTGTC...CAATTTGTGCAGAATTGCTTTGCAGGTGGATTTAGTGATTCCCATGCAGCTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
||
| CDS-3UTR CCA 90 bp | CATTTAATTCAGAACAAATGCGCCATGCCAAAGTGCAACAAATATTGTGCAACAGGCCGCAGGCGCTGGTaGTGGGAGGAGGCTGCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: HLIQNKCAMPKCNKYCATGRRRW*WEEAAR Trigger: CCTAGCAGCCTCCTCCCACCACCAGCGCCTGCGGCC...TGTTGCACAATATTTGTTGCACTTTGGCATGGCGCATTTGTTCTGAATTAAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
||
| CDS-3UTR CCA 90 bp | ATCTCATTTAATTCAGAACAAATGCGCCATGCCAAAGTGCAACAAATATTGTGCTGGGGCCGCAGGCGCTaGTGGTGGGAGGAGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ISFNSEQMRHAKVQQILCWGRRR*WWEEAA Trigger: AGCAGCCTCCTCCCACCACCAGCGCCTGCGGCCCCA...GCACAATATTTGTTGCACTTTGGCATGGCGCATTTGTTCTGAATTAAATGAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
||
| CDS-3UTR GCA 90 bp | TTAATTCAGAACAAATGCGCCATGCCAAAGTGCAACAAATATTGTGCAACACTCCGGGCTCGGCCTCCCTaGCCTGGGAGCTCCTTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LIQNKCAMPKCNKYCATLRARPP*PGSSLN Trigger: GTTTAAGGAGCTCCCAGGGCAGGGAGGCCGAGCCCG...GAGTGTTGCACAATATTTGTTGCACTTTGGCATGGCGCATTTGTTCTGAATTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
||
| CDS-3UTR CCA 90 bp | AACAGCTGCATGGGAATCACTAAATCCACCTGCAAAGCAATTCTGCACAAATTGTCGGCCTCCCTGCCCTaGGAGCTCCTTAAACTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: NSCMGITKSTCKAILHKLSASLP*ELLKLQ Trigger: CTGCAGTTTAAGGAGCTCCCAGGGCAGGGAGGCCGA...CAATTTGTGCAGAATTGCTTTGCAGGTGGATTTAGTGATTCCCATGCAGCTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
||
| CDS-3UTR GCA 90 bp | TGCATTCAAAAACTAGAGATGAAGACAAGAATACTTATCTACACAGGCACTGGCTTGAGCTGCTGCTGCTaGTGCTCCGGAGGCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CIQKLEMKTRILIYTGTGLSCCC*CSGGSC Trigger: GCAGCTGCCTCCGGAGCAGCAGCAGCAGCAGCTCAA...GCCAGTGCCTGTGTAGATAAGTATTCTTGTCTTCATCTCTAGTTTTTGAATGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
||
| CDS-3UTR GCA 90 bp | CAGAACAAATGCGCCATGCCAAAGTGCAACAAATATTGTGCAACACTCAATGGAATCAAGCCGTTGAGCTaGTGCTGCTGCTGCTCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: QNKCAMPKCNKYCATLNGIKPLS*CCCCSG Trigger: TCCGGAGCAGCAGCAGCAGCAGCTCAACGGCTTGAT...TCCATTGAGTGTTGCACAATATTTGTTGCACTTTGGCATGGCGCATTTGTTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
||
| CDS-3UTR GCA 90 bp | TTAATTCAGAACAAATGCGCCATGCCAAAGTGCAACAAATATTGTGCAACACTCGACAGCAGCCGCACCTaGTCGTCCATCTCCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LIQNKCAMPKCNKYCATLDSSRT*SSISSS Trigger: GGAGGAGGAGATGGACGAGCAGGTGCGGCTGCTGTC...GAGTGTTGCACAATATTTGTTGCACTTTGGCATGGCGCATTTGTTCTGAATTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
||
| CDS-3UTR GCA 90 bp | CATTTAATTCAGAACAAATGCGCCATGCCAAAGTGCAACAAATATTGTGCAACACGGGCTCGGCCTCCCTaGCCTGGGAGCTCCTTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: HLIQNKCAMPKCNKYCATRARPP*PGSSLN Trigger: GTTTAAGGAGCTCCCAGGGCAGGGAGGCCGAGCCCG...TGTTGCACAATATTTGTTGCACTTTGGCATGGCGCATTTGTTCTGAATTAAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
||
| CDS-3UTR CCA 90 bp | AAATCCACCTGCAAAGCAATTCTGCACAAATTGCATTGCATGCAAAAGTCGCTTTCGGCCTCCCTGCCCTaGGAGCTCCTTAAACTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KSTCKAILHKLHCMQKSLSASLP*ELLKLQ Trigger: CTGCAGTTTAAGGAGCTCCCAGGGCAGGGAGGCCGA...AAGCGACTTTTGCATGCAATGCAATTTGTGCAGAATTGCTTTGCAGGTGGATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
||
| CDS-3UTR CCA 90 bp | TTAATTCAGAACAAATGCGCCATGCCAAAGTGCAACAAATATTGTGCAACACTCCCTCGGCTCCTTTTGTaGCAGTCACTTTGGAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LIQNKCAMPKCNKYCATLPRLLL*QSLWRP Trigger: GGGCCTCCAAAGTGACTGCCACAAAAGGAGCCGAGG...GAGTGTTGCACAATATTTGTTGCACTTTGGCATGGCGCATTTGTTCTGAATTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
||
| CDS-3UTR CCA 90 bp | ACAGATAACAGCTGCATGGGAATCACTAAATCCACCTGCAAAGCAATTCTGCACTTAAACTGCAGCCGGTaGTCAGAGACGAAGACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TDNSCMGITKSTCKAILHLNCSR*SETKTA Trigger: TGCTGTCTTCGTCTCTGACCACCGGCTGCAGTTTAA...GTGCAGAATTGCTTTGCAGGTGGATTTAGTGATTCCCATGCAGCTGTTATCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
||
| CDS-3UTR CCA 90 bp | AATCCACCTGCAAAGCAATTCTGCACAAATTGCATTGCATGCAAAAGTCGCTTCCCAACTTGCAAACGATaGCACCTACACACTCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: NPPAKQFCTNCIACKSRFPTCKR*HLHTPP Trigger: GGGAGGAGTGTGTAGGTGCCATCGTTTGCAAGTTGG...GAAGCGACTTTTGCATGCAATGCAATTTGTGCAGAATTGCTTTGCAGGTGGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153488.9 |
||
| 3UTR CAA 72 bp | ATCACTAAATCCACCTGCAAAGCAATTCTGCACAAATaGCATTGCATGCAAAAGTCGCTTCCGTGTGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ITKSTCKAILHK*HCMQKSLPCGW Trigger: CCACCCACACGGAAGCGACTTTTGCATGCAATGCAATTTGTGCAGAATTGCTTTGCAGGTGGATTTAGTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037362.6 ENSMUST00000136995.2 ENSMUST00000153488.9 |
||
| CDS-3UTR CCA 90 bp | ACTAAATCCACCTGCAAAGCAATTCTGCACAAATTGCATTGCATGCAAAAGTCGTTAAACTGCAGCCGGTaGTCAGAGACGAAGACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TKSTCKAILHKLHCMQKSLNCSR*SETKTA Trigger: TGCTGTCTTCGTCTCTGACCACCGGCTGCAGTTTAA...CGACTTTTGCATGCAATGCAATTTGTGCAGAATTGCTTTGCAGGTGGATTTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
||
| CDS-3UTR CCA 90 bp | CTAAATCCACCTGCAAAGCAATTCTGCACAAATTGCATTGCATGCAAAAGTCGCAGTCCACGGCTAACATaGCTATATAACCTCTGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: LNPPAKQFCTNCIACKSRSPRLT*LYNLCG Trigger: TCCGCAGAGGTTATATAGCCATGTTAGCCGTGGACT...GCGACTTTTGCATGCAATGCAATTTGTGCAGAATTGCTTTGCAGGTGGATTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
||
| CDS-3UTR CCA 90 bp | ACAGATAACAGCTGCATGGGAATCACTAAATCCACCTGCAAAGCAATTCTGCACCATTTCTCCTGTATTTaGAGTCCACGGCTAACATGG | + |
|
Preference number: 4 (lower is better) Translates to: TDNSCMGITKSTCKAILHHFSCI*SPRLTW Trigger: CCATGTTAGCCGTGGACTCCAAATACAGGAGAAATG...GTGCAGAATTGCTTTGCAGGTGGATTTAGTGATTCCCATGCAGCTGTTATCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
||
| 3UTR CAA 72 bp | ATAGCACTGTCAGCAGACTTTGCAAATGAACAAGTCTaGGCTATTAACTGGCACATCCTGCTGGTACCAACA | + |
|
Preference number: 4 (lower is better) Translates to: IALSADFANEQV*AINWHILLVPT Trigger: TGTTGGTACCAGCAGGATGTGCCAGTTAATAGCCAAGACTTGTTCATTTGCAAAGTCTGCTGACAGTGCTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
||
| CDS-3UTR CCA 90 bp | CCTGCAAAGCAATTCTGCACAAATTGCATTGCATGCAAAAGTCGCTTCCGTGTGCAAGAAACACAGCTGTaGCCAGTTGTGGATAAAATA | + |
|
Preference number: 4 (lower is better) Translates to: PAKQFCTNCIACKSRFRVQETQL*PVVDKI Trigger: TATTTTATCCACAACTGGCCACAGCTGTGTTTCTTG...CACACGGAAGCGACTTTTGCATGCAATGCAATTTGTGCAGAATTGCTTTGCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037362.6 ENSMUST00000136995.2 ENSMUST00000153488.9 |
||
| CDS-3UTR CCA 90 bp | ATCTCATTTAATTCAGAACAAATGCGCCATGCCAAAGTGCAACAAATATTGTGCACTCCTCCCCTACCATaGCCAAGAAACACAGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: ISFNSEQMRHAKVQQILCTPPLP*PRNTAV Trigger: CACAGCTGTGTTTCTTGGCCATGGTAGGGGAGGAGT...GCACAATATTTGTTGCACTTTGGCATGGCGCATTTGTTCTGAATTAAATGAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153488.9 |
||
| CDS-3UTR GCA 90 bp | AAATCCACCTGCAAAGCAATTCTGCACAAATTGCATTGCATGCAAAAGTCGCTTTGTGCATATCCAACTTaGAAACGATGGCACCTACAC | + |
|
Preference number: 4 (lower is better) Translates to: KSTCKAILHKLHCMQKSLCAYPT*KRWHLH Trigger: GTGTAGGTGCCATCGTTTGCAAGTTGGATATGCACA...AAGCGACTTTTGCATGCAATGCAATTTGTGCAGAATTGCTTTGCAGGTGGATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
||
| CDS-3UTR GCA 90 bp | AATCCACCTGCAAAGCAATTCTGCACAAATTGCATTGCATGCAAAAGTCGCTTCCGGAACATCTTTTTGTaGATATCCAACTTGCAAACG | + |
|
Preference number: 4 (lower is better) Translates to: NPPAKQFCTNCIACKSRFRNIFL*ISNLQT Trigger: CGTTTGCAAGTTGGATATGCACAAAAAGATGTTCCG...GAAGCGACTTTTGCATGCAATGCAATTTGTGCAGAATTGCTTTGCAGGTGGATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
||
| CDS-3UTR CCA 90 bp | CTAAATCCACCTGCAAAGCAATTCTGCACAAATTGCATTGCATGCAAAAGTCGCATGATATCAGGCATTTaGAGCTCAGATTCATATCGG | + |
|
Preference number: 4 (lower is better) Translates to: LNPPAKQFCTNCIACKSRMISGI*SSDSYR Trigger: CCGATATGAATCTGAGCTCCAAATGCCTGATATCAT...GCGACTTTTGCATGCAATGCAATTTGTGCAGAATTGCTTTGCAGGTGGATTTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
||
| CDS-3UTR CCA 90 bp | ATCCACCTGCAAAGCAATTCTGCACAAATTGCATTGCATGCAAAAGTCGCTTCCAGCTGTGGCCAGTTGTaGATAAAATATCTATACGTA | + |
|
Preference number: 4 (lower is better) Translates to: IHLQSNSAQIALHAKVASSCGQL*IKYLYV Trigger: TACGTATAGATATTTTATCCACAACTGGCCACAGCT...GGAAGCGACTTTTGCATGCAATGCAATTTGTGCAGAATTGCTTTGCAGGTGGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037362.6 ENSMUST00000136995.2 ENSMUST00000153488.9 |
||
| CDS-3UTR CCA 90 bp | ATTCAGAACAAATGCGCCATGCCAAAGTGCAACAAATATTGTGCAACACTCAATCCAACTTGCAAACGATaGCACCTACACACCTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: IQNKCAMPKCNKYCATLNPTCKR*HLHTCF Trigger: AAAACAGGTGTGTAGGTGCCATCGTTTGCAAGTTGG...ATTGAGTGTTGCACAATATTTGTTGCACTTTGGCATGGCGCATTTGTTCTGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037362.6 |
||
| CDS-3UTR CCA 90 bp | CATTTAATTCAGAACAAATGCGCCATGCCAAAGTGCAACAAATATTGTGCAACAAGTCCACGGCTAACATaGCTATATAACCTCTGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: HLIQNKCAMPKCNKYCATSPRLT*LYNLCG Trigger: TCCGCAGAGGTTATATAGCCATGTTAGCCGTGGACT...TGTTGCACAATATTTGTTGCACTTTGGCATGGCGCATTTGTTCTGAATTAAATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
||
| CDS-3UTR CCA 90 bp | ATTCAGAACAAATGCGCCATGCCAAAGTGCAACAAATATTGTGCAACACTCAATCATTTCTCCTGTATTTaGAGTCCACGGCTAACATGG | + |
|
Preference number: 4 (lower is better) Translates to: IQNKCAMPKCNKYCATLNHFSCI*SPRLTW Trigger: CCATGTTAGCCGTGGACTCCAAATACAGGAGAAATG...ATTGAGTGTTGCACAATATTTGTTGCACTTTGGCATGGCGCATTTGTTCTGAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
||
| CDS-3UTR GCA 90 bp | ACTAAATCCACCTGCAAAGCAATTCTGCACAAATTGCATTGCATGCAAAAGTCGTGGCTATATAACCTCTaGGGAACATCTTTTTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: TKSTCKAILHKLHCMQKSWLYNL*GTSFCA Trigger: TGCACAAAAAGATGTTCCGCAGAGGTTATATAGCCA...CGACTTTTGCATGCAATGCAATTTGTGCAGAATTGCTTTGCAGGTGGATTTAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
||
| CDS-3UTR CCA 90 bp | GTTTCCAAAACAACCTCGTCACAGTCTCCTTCAACCATGGCATATATAGCTTTCAGCTGTGGCCAGTTGTaGATAAAATATCTATACGTA | + |
|
Preference number: 4 (lower is better) Translates to: VSKTTSSQSPSTMAYIAFSCGQL*IKYLYV Trigger: TACGTATAGATATTTTATCCACAACTGGCCACAGCT...GAAAGCTATATATGCCATGGTTGAAGGAGACTGTGACGAGGTTGTTTTGGAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136995.2 |
||
| CDS-3UTR GCA 90 bp | CAATCTCATTTAATTCAGAACAAATGCGCCATGCCAAAGTGCAACAAATATTGTTGTGCATATCCAACTTaGAAACGATGGCACCTACAC | + |
|
Preference number: 4 (lower is better) Translates to: QSHLIQNKCAMPKCNKYCCAYPT*KRWHLH Trigger: GTGTAGGTGCCATCGTTTGCAAGTTGGATATGCACA...ACAATATTTGTTGCACTTTGGCATGGCGCATTTGTTCTGAATTAAATGAGATTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
||
| CDS-3UTR GCA 90 bp | CATCAGACAATCAGTTACTTCAGCAATTCTGAACTGAAGGGTAGTAGTGATACTCGGAACATCTTTTTGTaGATATCCAACTTGCAAACG | + |
|
Preference number: 4 (lower is better) Translates to: HQTISYFSNSELKGSSDTRNIFL*ISNLQT Trigger: CGTTTGCAAGTTGGATATGCACAAAAAGATGTTCCG...AGTATCACTACTACCCTTCAGTTCAGAATTGCTGAAGTAACTGATTGTCTGATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
||
| CDS-3UTR CCA 90 bp | TTAATTCAGAACAAATGCGCCATGCCAAAGTGCAACAAATATTGTGCAACACTCATGATATCAGGCATTTaGAGCTCAGATTCATATCGG | + |
|
Preference number: 4 (lower is better) Translates to: LIQNKCAMPKCNKYCATLMISGI*SSDSYR Trigger: CCGATATGAATCTGAGCTCCAAATGCCTGATATCAT...GAGTGTTGCACAATATTTGTTGCACTTTGGCATGGCGCATTTGTTCTGAATTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
||
| CDS-3UTR GCA 90 bp | ATCTCATTTAATTCAGAACAAATGCGCCATGCCAAAGTGCAACAAATATTGTGCTGGCTATATAACCTCTaGGGAACATCTTTTTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ISFNSEQMRHAKVQQILCWLYNL*GTSFCA Trigger: TGCACAAAAAGATGTTCCGCAGAGGTTATATAGCCA...GCACAATATTTGTTGCACTTTGGCATGGCGCATTTGTTCTGAATTAAATGAGAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
||
| CDS-3UTR CCA 90 bp | ATCTCATTTAATTCAGAACAAATGCGCCATGCCAAAGTGCAACAAATATTGTGCCAAGAAACACAGCTGTaGCCAGTTGTGGATAAAATA | + |
|
Preference number: 4 (lower is better) Translates to: ISFNSEQMRHAKVQQILCQETQL*PVVDKI Trigger: TATTTTATCCACAACTGGCCACAGCTGTGTTTCTTG...GCACAATATTTGTTGCACTTTGGCATGGCGCATTTGTTCTGAATTAAATGAGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037362.6 ENSMUST00000136995.2 ENSMUST00000153488.9 |
||
| CDS-3UTR CCA 90 bp | CATTTAATTCAGAACAAATGCGCCATGCCAAAGTGCAACAAATATTGTGCAACACAAGAAACACAGCTGTaGCCAGTTGTGGATAAAATA | + |
|
Preference number: 4 (lower is better) Translates to: HLIQNKCAMPKCNKYCATQETQL*PVVDKI Trigger: TATTTTATCCACAACTGGCCACAGCTGTGTTTCTTG...TGTTGCACAATATTTGTTGCACTTTGGCATGGCGCATTTGTTCTGAATTAAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037362.6 ENSMUST00000136995.2 ENSMUST00000153488.9 |
||
| 3UTR CAA 72 bp | ACCATACTTTATTTGACTGTATCTTATTCAGACAGCTaGCACATTTCAAATCCCATCAAATCTCTCTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TILYLTVSYSDS*HISNPIKSLSP Trigger: TGGAGAGAGAGATTTGATGGGATTTGAAATGTGCAAGCTGTCTGAATAAGATACAGTCAAATAAAGTATGGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
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| CDS CCA 90 bp | AAGGCAAGAACGCGCCTTGGCCGAGGTCGCCGCCTCGCCGCCCGCTaGGCTCCCGCAGCCGCCTTCGTGCTCCTCGTCGTCCTCCTCGTC | + |
|
Preference number: 5 (lower is better) Translates to: KARTRLGRGRRLAAR*APAAAFVLLVVLLV Trigger: GACGAGGAGGACGACGAGGAGCACGAAGGCGGCTGCGGGAGCCCAGCGGGCGGCGAGGCGGCGACCTCGGCCAAGGCGCGTTCTTGCCTT 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
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| CDS GCA 90 bp | TGTGGCAGTCACTTTGGAGGCCCCGTCGGGGGCGGCCGCCTCCGCTaGACTCAGAACCTTACTCTTGAGGGTCGCCGCGGCCCGGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: CGSHFGGPVGGGRLR*TQNLTLEGRRGPEV Trigger: CACCTCCGGGCCGCGGCGACCCTCAAGAGTAAGGTTCTGAGTGCAGCGGAGGCGGCCGCCCCCGACGGGGCCTCCAAAGTGACTGCCACA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
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| CDS GCA 90 bp | GAAGACAGCAGCCGCACCTGCTCGTCCATCTCCTCCTCCTCCTGCTaGTCGGTGCCCTCCACCAGTCCATTTCGGGCCGCAGCGGGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: EDSSRTCSSISSSSC*SVPSTSPFRAAAGS Trigger: CGACCCCGCTGCGGCCCGAAATGGACTGGTGGAGGGCACCGAGCAGCAGGAGGAGGAGGAGATGGACGAGCAGGTGCGGCTGCTGTCTTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
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| CDS GCA 90 bp | GCCCGGAGGTGTCGCAGTTCTGGGCCGATCAAGCCGTTGAGCTGCTaGTGCTGCTGCTCCGGAGGCAGCTGCGGGCAGCGAAGGCAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: ARRCRSSGPIKPLSC*CCCSGGSCGQRRQE Trigger: TTCTTGCCTTCGCTGCCCGCAGCTGCCTCCGGAGCAGCAGCAGCAGCAGCTCAACGGCTTGATCGGCCCAGAACTGCGACACCTCCGGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
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| CDS CCA 90 bp | AACCTTACTCTTGAGGGTCGCCGCGGCCCGGAGGTGTCGCAGTTCTaGGCCGATCAAGCCGTTGAGCTGCTGCTGCTGCTGCTCCGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: NLTLEGRRGPEVSQF*ADQAVELLLLLLRR Trigger: CCTCCGGAGCAGCAGCAGCAGCAGCTCAACGGCTTGATCGGCCCAGAACTGCGACACCTCCGGGCCGCGGCGACCCTCAAGAGTAAGGTT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
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| CDS CCA 90 bp | CGGGCTCGGCCTCCCTGCCCTGGGAGCTCCTTAAACTGCAGCCGGTaGTCAGAGACGAAGACAGCAGCCGCACCTGCTCGTCCATCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RARPPCPGSSLNCSR*SETKTAAAPARPSP Trigger: AGGAGATGGACGAGCAGGTGCGGCTGCTGTCTTCGTCTCTGACCACCGGCTGCAGTTTAAGGAGCTCCCAGGGCAGGGAGGCCGAGCCCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
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| CDS GCA 90 bp | ATCGGACGTATCGTATCGTCCGATCCTCCCCGGGCTCGGCCTCCCTaGCCTGGGAGCTCCTTAAACTGCAGCCGGTGGTCAGAGACGAAG | + |
|
Preference number: 5 (lower is better) Translates to: IGRIVSSDPPRARPP*PGSSLNCSRWSETK Trigger: CTTCGTCTCTGACCACCGGCTGCAGTTTAAGGAGCTCCCAGGGCAGGGAGGCCGAGCCCGGGGAGGATCGGACGATACGATACGTCCGAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
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| CDS CCA 90 bp | ACGTATCGTATCGTCCGATCCTCCCCGGGCTCGGCCTCCCTGCCCTaGGAGCTCCTTAAACTGCAGCCGGTGGTCAGAGACGAAGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: TYRIVRSSPGSASLP*ELLKLQPVVRDEDS Trigger: GCTGTCTTCGTCTCTGACCACCGGCTGCAGTTTAAGGAGCTCCCAGGGCAGGGAGGCCGAGCCCGGGGAGGATCGGACGATACGATACGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
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| CDS-3UTR CAA 90 bp | CAGCTCCATCCCTTTAAGCCATTTCTCAGTTTCCCAAGTAGGGTCAGCTTCTTAGTCCCTCGGCTCCTTTaGTGGCAGTCACTTTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: QLHPFKPFLSFPSRVSFLVPRLL*WQSLWR Trigger: CCTCCAAAGTGACTGCCACAAAAGGAGCCGAGGGAC...TAAGAAGCTGACCCTACTTGGGAAACTGAGAAATGGCTTAAAGGGATGGAGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
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| CDS GCA 90 bp | TGGCTATATAACCTCTGCGGAACATCTTTTTGTGCATATCCAACTTaGAAACGATGGCACCTACACACTCCTCCCCTACCATGGCCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: WLYNLCGTSFCAYPT*KRWHLHTPPLPWPR Trigger: TCTTGGCCATGGTAGGGGAGGAGTGTGTAGGTGCCATCGTTTGCAAGTTGGATATGCACAAAAAGATGTTCCGCAGAGGTTATATAGCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153488.9 |
||
| CDS CCA 90 bp | GGTTCAGACAGATCTTTGGTGATCAGTCTCATGATATCAGGCATTTaGAGCTCAGATTCATATCGGACGTATCGTATCGTCCGATCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GSDRSLVISLMISGI*SSDSYRTYRIVRSS Trigger: GGAGGATCGGACGATACGATACGTCCGATATGAATCTGAGCTCCAAATGCCTGATATCATGAGACTGATCACCAAAGATCTGTCTGAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
||
| CDS-3UTR CAA 90 bp | ATCTCATTTAATTCAGAACAAATGCGCCATGCCAAAGTGCAACAAATATTGTGCGTCCCTCGGCTCCTTTaGTGGCAGTCACTTTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: ISFNSEQMRHAKVQQILCVPRLL*WQSLWR Trigger: CCTCCAAAGTGACTGCCACAAAAGGAGCCGAGGGAC...GCACAATATTTGTTGCACTTTGGCATGGCGCATTTGTTCTGAATTAAATGAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
||
| CDS GCA 90 bp | TTCTCCTGTATTTGGAGTCCACGGCTAACATGGCTATATAACCTCTaGGGAACATCTTTTTGTGCATATCCAACTTGCAAACGATGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: FSCIWSPRLTWLYNL*GTSFCAYPTCKRWH Trigger: GTGCCATCGTTTGCAAGTTGGATATGCACAAAAAGATGTTCCGCAGAGGTTATATAGCCATGTTAGCCGTGGACTCCAAATACAGGAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
||
| CDS-3UTR CAA 90 bp | ACAGATAACAGCTGCATGGGAATCACTAAATCCACCTGCAAAGCAATTCTGCACGGTTCAGACAGATCTTaGGTGATCAGTCTCATGATA | + |
|
Preference number: 5 (lower is better) Translates to: TDNSCMGITKSTCKAILHGSDRS*VISLMI Trigger: TATCATGAGACTGATCACCAAAGATCTGTCTGAACC...GTGCAGAATTGCTTTGCAGGTGGATTTAGTGATTCCCATGCAGCTGTTATCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
||
| CDS-3UTR CAA 90 bp | CTAAATCCACCTGCAAAGCAATTCTGCACAAATTGCATTGCATGCAAAAGTCGCTTGTGCATATCCAACTaGCAAACGATGGCACCTACA | + |
|
Preference number: 5 (lower is better) Translates to: LNPPAKQFCTNCIACKSRLCISN*QTMAPT Trigger: TGTAGGTGCCATCGTTTGCAAGTTGGATATGCACAA...GCGACTTTTGCATGCAATGCAATTTGTGCAGAATTGCTTTGCAGGTGGATTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
||
| CDS GCA 90 bp | TGGCTATATAACCTCTGCGGAACATCTTTTTGTGCATATCCAACTTaGAAACGATGGCACCTACACACCTGTTTTCATTCCATCCACTTA | + |
|
Preference number: 5 (lower is better) Translates to: WLYNLCGTSFCAYPT*KRWHLHTCFHSIHL Trigger: TAAGTGGATGGAATGAAAACAGGTGTGTAGGTGCCATCGTTTGCAAGTTGGATATGCACAAAAAGATGTTCCGCAGAGGTTATATAGCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037362.6 |
||
| CDS-3UTR CAA 90 bp | ATTCAGAACAAATGCGCCATGCCAAAGTGCAACAAATATTGTGCAACACTCAATCCATTTCTCCTGTATTaGGAGTCCACGGCTAACATG | + |
|
Preference number: 5 (lower is better) Translates to: IQNKCAMPKCNKYCATLNPFLLY*ESTANM Trigger: CATGTTAGCCGTGGACTCCAAATACAGGAGAAATGG...ATTGAGTGTTGCACAATATTTGTTGCACTTTGGCATGGCGCATTTGTTCTGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
||
| CDS-3UTR CAA 90 bp | TGCATTCAAAAACTAGAGATGAAGACAAGAATACTTATCTACACAGGCACTGGCCCATTTCTCCTGTATTaGGAGTCCACGGCTAACATG | + |
|
Preference number: 5 (lower is better) Translates to: CIQKLEMKTRILIYTGTGPFLLY*ESTANM Trigger: CATGTTAGCCGTGGACTCCAAATACAGGAGAAATGG...GCCAGTGCCTGTGTAGATAAGTATTCTTGTCTTCATCTCTAGTTTTTGAATGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
||
| CDS-3UTR CAA 90 bp | AAATCCACCTGCAAAGCAATTCTGCACAAATTGCATTGCATGCAAAAGTCGCTTCTGCGGAACATCTTTTaGTGCATATCCAACTTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: KSTCKAILHKLHCMQKSLLRNIF*CISNLQ Trigger: TTGCAAGTTGGATATGCACAAAAAGATGTTCCGCAG...AAGCGACTTTTGCATGCAATGCAATTTGTGCAGAATTGCTTTGCAGGTGGATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
||
| CDS-3UTR CAA 90 bp | ATTCAGAACAAATGCGCCATGCCAAAGTGCAACAAATATTGTGCAACACTCAATCACAGCTGTGGCCAGTaGTGGATAAAATATCTATAC | + |
|
Preference number: 5 (lower is better) Translates to: IQNKCAMPKCNKYCATLNHSCGQ*WIKYLY Trigger: GTATAGATATTTTATCCACAACTGGCCACAGCTGTG...ATTGAGTGTTGCACAATATTTGTTGCACTTTGGCATGGCGCATTTGTTCTGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037362.6 ENSMUST00000136995.2 ENSMUST00000153488.9 |
||
| CDS-3UTR CAA 90 bp | TGCATTCAAAAACTAGAGATGAAGACAAGAATACTTATCTACACAGGCACTGGCCTGCGGAACATCTTTTaGTGCATATCCAACTTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: CIQKLEMKTRILIYTGTGLRNIF*CISNLQ Trigger: TTGCAAGTTGGATATGCACAAAAAGATGTTCCGCAG...GCCAGTGCCTGTGTAGATAAGTATTCTTGTCTTCATCTCTAGTTTTTGAATGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
||
| CDS-3UTR CAA 90 bp | CATTTAATTCAGAACAAATGCGCCATGCCAAAGTGCAACAAATATTGTGCAACAGGTTCAGACAGATCTTaGGTGATCAGTCTCATGATA | + |
|
Preference number: 5 (lower is better) Translates to: HLIQNKCAMPKCNKYCATGSDRS*VISLMI Trigger: TATCATGAGACTGATCACCAAAGATCTGTCTGAACC...TGTTGCACAATATTTGTTGCACTTTGGCATGGCGCATTTGTTCTGAATTAAATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
||
| CDS CAA 90 bp | GCCCCGTCGGGGGCGGCCGCCTCCGCTGCACTCAGAACCTTACTCTaGAGGGTCGCCGCGGCCCGGAGGTGTCGCAGTTCTGGGCCGATC | + |
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Preference number: 6 (lower is better) Translates to: APSGAAASAALRTLL*RVAAARRCRSSGPI Trigger: GATCGGCCCAGAACTGCGACACCTCCGGGCCGCGGCGACCCTCAAGAGTAAGGTTCTGAGTGCAGCGGAGGCGGCCGCCCCCGACGGGGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
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| CDS TCA 72 bp | GGGCGGCCGCCTCCGCTGCACTCAGAACCTTACTCTTaGGGGTCGCCGCGGCCCGGAGGTGTCGCAGTTCTG | + |
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Preference number: 6 (lower is better) Translates to: GRPPPLHSEPYS*GSPRPGGVAVL Trigger: CAGAACTGCGACACCTCCGGGCCGCGGCGACCCTCAAGAGTAAGGTTCTGAGTGCAGCGGAGGCGGCCGCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
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| CDS CAA 72 bp | GGGGCGGCCGCCTCCGCTGCACTCAGAACCTTACTCTaGAGGGTCGCCGCGGCCCGGAGGTGTCGCAGTTCT | + |
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Preference number: 6 (lower is better) Translates to: GAAASAALRTLL*RVAAARRCRSS Trigger: AGAACTGCGACACCTCCGGGCCGCGGCGACCCTCAAGAGTAAGGTTCTGAGTGCAGCGGAGGCGGCCGCCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
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| CDS GCA 72 bp | CGCAGTTCTGGGCCGATCAAGCCGTTGAGCTGCTGCTaGTGCTGCTCCGGAGGCAGCTGCGGGCAGCGAAGG | + |
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Preference number: 6 (lower is better) Translates to: RSSGPIKPLSCC*CCSGGSCGQRR Trigger: CCTTCGCTGCCCGCAGCTGCCTCCGGAGCAGCAGCAGCAGCAGCTCAACGGCTTGATCGGCCCAGAACTGCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
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| CDS CCA 72 bp | CTTGAGGGTCGCCGCGGCCCGGAGGTGTCGCAGTTCTaGGCCGATCAAGCCGTTGAGCTGCTGCTGCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: LEGRRGPEVSQF*ADQAVELLLLL Trigger: CAGCAGCAGCAGCAGCTCAACGGCTTGATCGGCCCAGAACTGCGACACCTCCGGGCCGCGGCGACCCTCAAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
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| CDS CAA 72 bp | GCCCGGAGGTGTCGCAGTTCTGGGCCGATCAAGCCGTaGAGCTGCTGCTGCTGCTGCTCCGGAGGCAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: ARRCRSSGPIKP*SCCCCCSGGSC Trigger: GCAGCTGCCTCCGGAGCAGCAGCAGCAGCAGCTCAACGGCTTGATCGGCCCAGAACTGCGACACCTCCGGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
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| CDS GCA 72 bp | AGGTGTCGCAGTTCTGGGCCGATCAAGCCGTTGAGCTaGTGCTGCTGCTGCTCCGGAGGCAGCTGCGGGCAG | + |
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Preference number: 6 (lower is better) Translates to: RCRSSGPIKPLS*CCCCSGGSCGQ Trigger: CTGCCCGCAGCTGCCTCCGGAGCAGCAGCAGCAGCAGCTCAACGGCTTGATCGGCCCAGAACTGCGACACCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
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| CDS GCA 72 bp | CGGGCTCGGCCTCCCTGCCCTGGGAGCTCCTTAAACTaGAGCCGGTGGTCAGAGACGAAGACAGCAGCCGCA | + |
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Preference number: 6 (lower is better) Translates to: RARPPCPGSSLN*SRWSETKTAAA Trigger: TGCGGCTGCTGTCTTCGTCTCTGACCACCGGCTGCAGTTTAAGGAGCTCCCAGGGCAGGGAGGCCGAGCCCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
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| CDS GCA 72 bp | AGTTCTGGGCCGATCAAGCCGTTGAGCTGCTGCTGCTaGTGCTCCGGAGGCAGCTGCGGGCAGCGAAGGCAA | + |
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Preference number: 6 (lower is better) Translates to: SSGPIKPLSCCC*CSGGSCGQRRQ Trigger: TTGCCTTCGCTGCCCGCAGCTGCCTCCGGAGCAGCAGCAGCAGCAGCTCAACGGCTTGATCGGCCCAGAACT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
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| CDS GCA 72 bp | ATCGTATCGTCCGATCCTCCCCGGGCTCGGCCTCCCTaGCCTGGGAGCTCCTTAAACTGCAGCCGGTGGTCA | + |
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Preference number: 6 (lower is better) Translates to: IVSSDPPRARPP*PGSSLNCSRWS Trigger: TGACCACCGGCTGCAGTTTAAGGAGCTCCCAGGGCAGGGAGGCCGAGCCCGGGGAGGATCGGACGATACGAT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
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| CDS CCA 72 bp | CCTCCCTGCCCTGGGAGCTCCTTAAACTGCAGCCGGTaGTCAGAGACGAAGACAGCAGCCGCACCTGCTCGT | + |
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Preference number: 6 (lower is better) Translates to: PPCPGSSLNCSR*SETKTAAAPAR Trigger: ACGAGCAGGTGCGGCTGCTGTCTTCGTCTCTGACCACCGGCTGCAGTTTAAGGAGCTCCCAGGGCAGGGAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
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| CDS GCA 72 bp | AACCTCTGCGGAACATCTTTTTGTGCATATCCAACTTaGAAACGATGGCACCTACACACTCCTCCCCTACCA | + |
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Preference number: 6 (lower is better) Translates to: NLCGTSFCAYPT*KRWHLHTPPLP Trigger: TGGTAGGGGAGGAGTGTGTAGGTGCCATCGTTTGCAAGTTGGATATGCACAAAAAGATGTTCCGCAGAGGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153488.9 |
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| CDS CAA 90 bp | GGGTTCAGACAGATCTTTGGTGATCAGTCTCATGATATCAGGCATTaGGAGCTCAGATTCATATCGGACGTATCGTATCGTCCGATCCTC | + |
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Preference number: 6 (lower is better) Translates to: GFRQIFGDQSHDIRH*ELRFISDVSYRPIL Trigger: GAGGATCGGACGATACGATACGTCCGATATGAATCTGAGCTCCAAATGCCTGATATCATGAGACTGATCACCAAAGATCTGTCTGAACCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
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| CDS GCA 72 bp | AACCTCTGCGGAACATCTTTTTGTGCATATCCAACTTaGAAACGATGGCACCTACACACCTGTTTTCATTCC | + |
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Preference number: 6 (lower is better) Translates to: NLCGTSFCAYPT*KRWHLHTCFHS Trigger: GGAATGAAAACAGGTGTGTAGGTGCCATCGTTTGCAAGTTGGATATGCACAAAAAGATGTTCCGCAGAGGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037362.6 |
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| CDS CCA 72 bp | TGCCATTTCTCCTGTATTTGGAGTCCACGGCTAACATaGCTATATAACCTCTGCGGAACATCTTTTTGTGCA | + |
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Preference number: 6 (lower is better) Translates to: CHFSCIWSPRLT*LYNLCGTSFCA Trigger: TGCACAAAAAGATGTTCCGCAGAGGTTATATAGCCATGTTAGCCGTGGACTCCAAATACAGGAGAAATGGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
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| CDS CAA 72 bp | CAGATCTTTGGTGATCAGTCTCATGATATCAGGCATTaGGAGCTCAGATTCATATCGGACGTATCGTATCGT | + |
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Preference number: 6 (lower is better) Translates to: QIFGDQSHDIRH*ELRFISDVSYR Trigger: ACGATACGATACGTCCGATATGAATCTGAGCTCCAAATGCCTGATATCATGAGACTGATCACCAAAGATCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
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| CDS GCA 72 bp | ATTTGGAGTCCACGGCTAACATGGCTATATAACCTCTaGGGAACATCTTTTTGTGCATATCCAACTTGCAAA | + |
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Preference number: 6 (lower is better) Translates to: IWSPRLTWLYNL*GTSFCAYPTCK Trigger: TTTGCAAGTTGGATATGCACAAAAAGATGTTCCGCAGAGGTTATATAGCCATGTTAGCCGTGGACTCCAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037362.6 ENSMUST00000153488.9 |
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| CDS CCA 72 bp | GGAACATCTTTTTGTGCATATCCAACTTGCAAACGATaGCACCTACACACCTGTTTTCATTCCATCCACTTA | + |
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Preference number: 6 (lower is better) Translates to: GTSFCAYPTCKR*HLHTCFHSIHL Trigger: TAAGTGGATGGAATGAAAACAGGTGTGTAGGTGCCATCGTTTGCAAGTTGGATATGCACAAAAAGATGTTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037362.6 |
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