Pregenerated sensors for NAA20 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000002728Ensembl transcript IDs: ENSMUST00000002805.14, ENSMUST00000110000.8, ENSMUST00000134759.3, ENSMUST00000149461.3, ENSMUST00000165635.2, ENSMUST00000169732.8
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGGTTCACAGCAGGGGAGACAGGTCCCACCTACCTGTGCTGTTGCTaGTGTCTGTGTACAACCAGGGTTACTGTGAGCAGCAGAGCTGCA | + |
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Preference number: 1 (lower is better) Translates to: WFTAGETGPTYLCCC*CLCTTRVTVSSRAA Trigger: TGCAGCTCTGCTGCTCACAGTAACCCTGGTTGTACACAGACAGCAGCAACAGCACAGGTAGGTGGGACCTGTCTCCCCTGCTGTGAACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134759.3 |
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| 3UTR GCA 90 bp | GTCTGGTTCACAGCAGGGGAGACAGGTCCCACCTACCTGTGCTGTTaGTGCTGTCTGTGTACAACCAGGGTTACTGTGAGCAGCAGAGCT | + |
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Preference number: 1 (lower is better) Translates to: VWFTAGETGPTYLCC*CCLCTTRVTVSSRA Trigger: AGCTCTGCTGCTCACAGTAACCCTGGTTGTACACAGACAGCAGCAACAGCACAGGTAGGTGGGACCTGTCTCCCCTGCTGTGAACCAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134759.3 |
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| 3UTR TCA 90 bp | GACGTGTTCTGGAAGCCATGTATGCCAGAAAGACCCAGGCTCTATTaGGCAGGGCTGCTGGAGACACTATGGAGCCACTTACCCTCTCTA | + |
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Preference number: 1 (lower is better) Translates to: DVFWKPCMPERPRLY*AGLLETLWSHLPSL Trigger: TAGAGAGGGTAAGTGGCTCCATAGTGTCTCCAGCAGCCCTGCTCAATAGAGCCTGGGTCTTTCTGGCATACATGGCTTCCAGAACACGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134759.3 |
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| 3UTR CCA 90 bp | CTTCTTAAGAGCAAGCAGCCACTTCTTTCAGAACGTAGTGTTAGCTaGTCTTCCTGCCGTCCAGCAACTGACACTACTACCGTGAGCTCC | + |
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Preference number: 1 (lower is better) Translates to: LLKSKQPLLSERSVS*SSCRPATDTTTVSS Trigger: GGAGCTCACGGTAGTAGTGTCAGTTGCTGGACGGCAGGAAGACCAGCTAACACTACGTTCTGAAAGAAGTGGCTGCTTGCTCTTAAGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134759.3 |
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| 3UTR GCA 90 bp | TTGCTGCTGTCTGTGTACAACCAGGGTTACTGTGAGCAGCAGAGCTaGAGTGGAACTGTGTCATGTAGTCTTTACCTTAACAGCTTGTGG | + |
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Preference number: 1 (lower is better) Translates to: LLLSVYNQGYCEQQS*SGTVSCSLYLNSLW Trigger: CCACAAGCTGTTAAGGTAAAGACTACATGACACAGTTCCACTGCAGCTCTGCTGCTCACAGTAACCCTGGTTGTACACAGACAGCAGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134759.3 |
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| 3UTR TCA 90 bp | GGTGCTTCCCAAAGCAATCACCTCTCCTATTTTGACTGCATGCCCTaGAACACGTATGAAGACGTGTTCTGGAAGCCATGTATGCCAGAA | + |
|
Preference number: 1 (lower is better) Translates to: GASQSNHLSYFDCMP*NTYEDVFWKPCMPE Trigger: TTCTGGCATACATGGCTTCCAGAACACGTCTTCATACGTGTTTCAGGGCATGCAGTCAAAATAGGAGAGGTGATTGCTTTGGGAAGCACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134759.3 |
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| 3UTR CCA 90 bp | AGCCTTCAAGAAATAGCATTACTTCTAAAGTACTTTTCAGAAAGATaGTGCCAGATGACTGTGACACCAGCAGCTTCTAAAAAGGCACCT | + |
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Preference number: 1 (lower is better) Translates to: SLQEIALLLKYFSER*CQMTVTPAASKKAP Trigger: AGGTGCCTTTTTAGAAGCTGCTGGTGTCACAGTCATCTGGCACCATCTTTCTGAAAAGTACTTTAGAAGTAATGCTATTTCTTGAAGGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000134759.3 |
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| 3UTR GCA 90 bp | CTTCAAGAAATAGCATTACTTCTAAAGTACTTTTCAGAAAGATGGTaGCAGATGACTGTGACACCAGCAGCTTCTAAAAAGGCACCTTAC | + |
|
Preference number: 1 (lower is better) Translates to: LQEIALLLKYFSERW*QMTVTPAASKKAPY Trigger: GTAAGGTGCCTTTTTAGAAGCTGCTGGTGTCACAGTCATCTGGCACCATCTTTCTGAAAAGTACTTTAGAAGTAATGCTATTTCTTGAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000134759.3 |
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| 3UTR TCA 90 bp | AAGCCACTGATCTACTATTGTAGTACAATCAGGAATACCCTAACTTaGCATTTTTCCTCCTTTTCTACTGAGTTGATAGAAACTGTTTAC | + |
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Preference number: 1 (lower is better) Translates to: KPLIYYCSTIRNTLT*HFSSFSTELIETVY Trigger: GTAAACAGTTTCTATCAACTCAGTAGAAAAGGAGGAAAAATGTCAAGTTAGGGTATTCCTGATTGTACTACAATAGTAGATCAGTGGCTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000134759.3 |
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| 3UTR CAA 90 bp | AGACGTGTTCTGGAAGCCATGTATGCCAGAAAGACCCAGGCTCTATaGAGCAGGGCTGCTGGAGACACTATGGAGCCACTTACCCTCTCT | + |
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Preference number: 2 (lower is better) Translates to: RRVLEAMYARKTQAL*SRAAGDTMEPLTLS Trigger: AGAGAGGGTAAGTGGCTCCATAGTGTCTCCAGCAGCCCTGCTCAATAGAGCCTGGGTCTTTCTGGCATACATGGCTTCCAGAACACGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134759.3 |
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| 3UTR-3UTR GCA 90 bp | CAGCTCCTGGACAGTGAGAGAGTAGGGCTGTGTGGTGCTTCCCAAAGCAATCACTCTGGAAGCCATGTATaGCAGAAAGACCCAGGCTCT | + |
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Preference number: 2 (lower is better) Translates to: QLLDSERVGLCGASQSNHSGSHV*QKDPGS Trigger: AGAGCCTGGGTCTTTCTGGCATACATGGCTTCCAGA...GTGATTGCTTTGGGAAGCACCACACAGCCCTACTCTCTCACTGTCCAGGAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134759.3 |
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| 3UTR-3UTR GCA 90 bp | ATATATGTGCAGCAGTGGTTCTCAGGCACAGGATTTAGGAGGAGGATGGAGGGAACTGTCTGGAACACCTaGCTAAGAACCACTGCCTAT | + |
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Preference number: 2 (lower is better) Translates to: IYVQQWFSGTGFRRRMEGTVWNT*LRTTAY Trigger: ATAGGCAGTGGTTCTTAGGCAGGTGTTCCAGACAGT...TCCCTCCATCCTCCTCCTAAATCCTGTGCCTGAGAACCACTGCTGCACATATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002805.14 ENSMUST00000110000.8 |
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| 3UTR-3UTR TCA 90 bp | CCTCTCATCACTGTTAGCTTTGAAATTCTTCTTAAGAGCAAGCAGCCACTTCTTCAACCAGGGTTACTGTaGGCAGCAGAGCTGCAGTGG | + |
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Preference number: 2 (lower is better) Translates to: PLITVSFEILLKSKQPLLQPGLL*AAELQW Trigger: CCACTGCAGCTCTGCTGCTCACAGTAACCCTGGTTG...AAGAAGTGGCTGCTTGCTCTTAAGAAGAATTTCAAAGCTAACAGTGATGAGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134759.3 |
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| 3UTR-3UTR GCA 90 bp | ACACTTTCTATGAAAAAGTTCCCAGGGAGCCCTCTCATCACTGTTAGCTTTGAAGGTCCCACCTACCTGTaGTGTTGCTGCTGTCTGTGT | + |
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Preference number: 2 (lower is better) Translates to: TLSMKKFPGSPLITVSFEGPTYL*CCCCLC Trigger: ACACAGACAGCAGCAACAGCACAGGTAGGTGGGACC...TTCAAAGCTAACAGTGATGAGAGGGCTCCCTGGGAACTTTTTCATAGAAAGTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000134759.3 |
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| 3UTR-3UTR TCA 90 bp | TCACTGTTAGCTTTGAAATTCTTCTTAAGAGCAAGCAGCCACTTCTTTCAGAACGCTTGTGGGCAAACCTaGGGCCACTCCCTCTCAGTT | + |
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Preference number: 2 (lower is better) Translates to: SLLALKFFLRASSHFFQNACGQT*GHSLSV Trigger: AACTGAGAGGGAGTGGCCTCAGGTTTGCCCACAAGC...GTTCTGAAAGAAGTGGCTGCTTGCTCTTAAGAAGAATTTCAAAGCTAACAGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134759.3 |
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| 3UTR-3UTR GCA 90 bp | ACACTTTCTATGAAAAAGTTCCCAGGGAGCCCTCTCATCACTGTTAGCTTTGAAACCTACCTGTGCTGTTaGTGCTGTCTGTGTACAACC | + |
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Preference number: 2 (lower is better) Translates to: TLSMKKFPGSPLITVSFETYLCC*CCLCTT Trigger: GGTTGTACACAGACAGCAGCAACAGCACAGGTAGGT...TTCAAAGCTAACAGTGATGAGAGGGCTCCCTGGGAACTTTTTCATAGAAAGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000134759.3 |
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| 3UTR-3UTR GCA 90 bp | GAAATTTCTTCTAGTAACTCCATAAGTTTAGCAGCCAAGCCAAGACGGCGGAATAGCTACCGAGCCTTCTaGTTTGCCCATAATATAACC | + |
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Preference number: 2 (lower is better) Translates to: EISSSNSISLAAKPRRRNSYRAF*FAHNIT Trigger: GGTTATATTATGGGCAAAGCAGAAGGCTCGGTAGCT...ATTCCGCCGTCTTGGCTTGGCTGCTAAACTTATGGAGTTACTAGAAGAAATTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165635.2 |
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| 3UTR-3UTR TCA 90 bp | AGGAGGATGGAGGGAGTCTTTTCTTGGCATGTACTGTCAACCATGATAGTGGAACTTAGCTGCCTTGATTaGATTTTACTATGGCAAACA | + |
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Preference number: 2 (lower is better) Translates to: RRMEGVFSWHVLSTMIVELSCLD*ILLWQT Trigger: TGTTTGCCATAGTAAAATTCAATCAAGGCAGCTAAG...TTCCACTATCATGGTTGACAGTACATGCCAAGAAAAGACTCCCTCCATCCTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002805.14 ENSMUST00000110000.8 |
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| 3UTR-3UTR GCA 90 bp | TGTGACATGAAATTCTTCAAAATCCTACATATTCCTGTAAGTGCTTTGAGGGCTTACCTGTGCTGTTGCTaGTGTCTGTGTACAACCAGG | + |
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Preference number: 2 (lower is better) Translates to: CDMKFFKILHIPVSALRAYLCCC*CLCTTR Trigger: CCTGGTTGTACACAGACAGCAGCAACAGCACAGGTA...AGCCCTCAAAGCACTTACAGGAATATGTAGGATTTTGAAGAATTTCATGTCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134759.3 |
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| 3UTR-3UTR GCA 90 bp | ACACTTTCTATGAAAAAGTTCCCAGGGAGCCCTCTCATCACTGTTAGCTTTGAACCTATTTTGACTGCATaGCCTGAAACACGTATGAAG | + |
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Preference number: 2 (lower is better) Translates to: TLSMKKFPGSPLITVSFEPILTA*PETRMK Trigger: CTTCATACGTGTTTCAGGGCATGCAGTCAAAATAGG...TTCAAAGCTAACAGTGATGAGAGGGCTCCCTGGGAACTTTTTCATAGAAAGTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000134759.3 |
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| 3UTR-3UTR GCA 90 bp | GCCTTGATTGAATTTTACTATGGCAAACAGTTCGAACATGTATGCTATTGCTCAACTGTCTGGAACACCTaGCTAAGAACCACTGCCTAT | + |
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Preference number: 2 (lower is better) Translates to: ALIEFYYGKQFEHVCYCSTVWNT*LRTTAY Trigger: ATAGGCAGTGGTTCTTAGGCAGGTGTTCCAGACAGT...TGAGCAATAGCATACATGTTCGAACTGTTTGCCATAGTAAAATTCAATCAAGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002805.14 ENSMUST00000110000.8 |
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| 3UTR CAA 90 bp | ACTGTCAACCATGATAGTGGAACGAGTCCTTCTGACTTAGCTGCCTaGATTGAATTTTACTATGGCAAACAGTTCGAACATGTATGCTAT | + |
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Preference number: 2 (lower is better) Translates to: TVNHDSGTSPSDLAA*IEFYYGKQFEHVCY Trigger: ATAGCATACATGTTCGAACTGTTTGCCATAGTAAAATTCAATCAAGGCAGCTAAGTCAGAAGGACTCGTTCCACTATCATGGTTGACAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002805.14 ENSMUST00000110000.8 |
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| 3UTR-3UTR TCA 90 bp | CCTCTCATCACTGTTAGCTTTGAAATTCTTCTTAAGAGCAAGCAGCCACTTCTTAGGAATACCCTAACTTaGCATTTTTCCTCCTTTTCT | + |
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Preference number: 2 (lower is better) Translates to: PLITVSFEILLKSKQPLLRNTLT*HFSSFS Trigger: AGAAAAGGAGGAAAAATGTCAAGTTAGGGTATTCCT...AAGAAGTGGCTGCTTGCTCTTAAGAAGAATTTCAAAGCTAACAGTGATGAGAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000134759.3 |
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| 3UTR GCA 72 bp | GCAGGGGAGACAGGTCCCACCTACCTGTGCTGTTGCTaGTGTCTGTGTACAACCAGGGTTACTGTGAGCAGC | + |
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Preference number: 3 (lower is better) Translates to: AGETGPTYLCCC*CLCTTRVTVSS Trigger: GCTGCTCACAGTAACCCTGGTTGTACACAGACAGCAGCAACAGCACAGGTAGGTGGGACCTGTCTCCCCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134759.3 |
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| 3UTR GCA 72 bp | ACAGCAGGGGAGACAGGTCCCACCTACCTGTGCTGTTaGTGCTGTCTGTGTACAACCAGGGTTACTGTGAGC | + |
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Preference number: 3 (lower is better) Translates to: TAGETGPTYLCC*CCLCTTRVTVS Trigger: GCTCACAGTAACCCTGGTTGTACACAGACAGCAGCAACAGCACAGGTAGGTGGGACCTGTCTCCCCTGCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134759.3 |
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| 3UTR TCA 72 bp | TGGAAGCCATGTATGCCAGAAAGACCCAGGCTCTATTaGGCAGGGCTGCTGGAGACACTATGGAGCCACTTA | + |
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Preference number: 3 (lower is better) Translates to: WKPCMPERPRLY*AGLLETLWSHL Trigger: TAAGTGGCTCCATAGTGTCTCCAGCAGCCCTGCTCAATAGAGCCTGGGTCTTTCTGGCATACATGGCTTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134759.3 |
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| 3UTR CCA 72 bp | AGCAAGCAGCCACTTCTTTCAGAACGTAGTGTTAGCTaGTCTTCCTGCCGTCCAGCAACTGACACTACTACC | + |
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Preference number: 3 (lower is better) Translates to: SKQPLLSERSVS*SSCRPATDTTT Trigger: GGTAGTAGTGTCAGTTGCTGGACGGCAGGAAGACCAGCTAACACTACGTTCTGAAAGAAGTGGCTGCTTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134759.3 |
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| 3UTR GCA 72 bp | TCTGTGTACAACCAGGGTTACTGTGAGCAGCAGAGCTaGAGTGGAACTGTGTCATGTAGTCTTTACCTTAAC | + |
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Preference number: 3 (lower is better) Translates to: SVYNQGYCEQQS*SGTVSCSLYLN Trigger: GTTAAGGTAAAGACTACATGACACAGTTCCACTGCAGCTCTGCTGCTCACAGTAACCCTGGTTGTACACAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134759.3 |
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| 3UTR CCA 72 bp | ACAGGATTTAGGAGGAGGATGGAGGGAGTCTTTTCTTaGCATGTACTGTCAACCATGATAGTGGAACGAGTC | + |
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Preference number: 3 (lower is better) Translates to: TGFRRRMEGVFS*HVLSTMIVERV Trigger: GACTCGTTCCACTATCATGGTTGACAGTACATGCCAAGAAAAGACTCCCTCCATCCTCCTCCTAAATCCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002805.14 ENSMUST00000110000.8 |
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| 3UTR-3UTR CAA 90 bp | TCAAGAAATAGCATTACTTCTAAAGTACTTTTCAGAAAGATGGTGCCAGATGACAAGACCCAGGCTCTATaGAGCAGGGCTGCTGGAGAC | + |
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Preference number: 3 (lower is better) Translates to: SRNSITSKVLFRKMVPDDKTQAL*SRAAGD Trigger: GTCTCCAGCAGCCCTGCTCAATAGAGCCTGGGTCTT...GTCATCTGGCACCATCTTTCTGAAAAGTACTTTAGAAGTAATGCTATTTCTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134759.3 |
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| 3UTR GCA 72 bp | GAAATGAGTGATAAGCCAGATTTGTCCATGCTTCCATaGTTTGCCAATCCCCAGAGTAAACTGCCTGTTGTT | + |
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Preference number: 3 (lower is better) Translates to: EMSDKPDLSMLP*FANPQSKLPVV Trigger: AACAACAGGCAGTTTACTCTGGGGATTGGCAAAGCATGGAAGCATGGACAAATCTGGCTTATCACTCATTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134759.3 |
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| 3UTR-3UTR CAA 90 bp | CTCATCACTGTTAGCTTTGAAATTCTTCTTAAGAGCAAGCAGCCACTTCTTTCACTTTACCTTAACAGCTaGTGGGCAAACCTGAGGCCA | + |
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Preference number: 3 (lower is better) Translates to: LITVSFEILLKSKQPLLSLYLNS*WANLRP Trigger: TGGCCTCAGGTTTGCCCACAAGCTGTTAAGGTAAAG...TGAAAGAAGTGGCTGCTTGCTCTTAAGAAGAATTTCAAAGCTAACAGTGATGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134759.3 |
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| 3UTR TCA 72 bp | TCCTGTAGACACTGTAACCCAACTGCTTGTACATGTTaGCGGCAACTTGATTGGATACTCTTACGAAGAGAT | + |
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Preference number: 3 (lower is better) Translates to: SCRHCNPTACTC*RQLDWILLRRD Trigger: ATCTCTTCGTAAGAGTATCCAATCAAGTTGCCGTCAACATGTACAAGCAGTTGGGTTACAGTGTCTACAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149461.3 |
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| 3UTR-3UTR CAA 90 bp | CTCATCACTGTTAGCTTTGAAATTCTTCTTAAGAGCAAGCAGCCACTTCTTTCACAGGAATACCCTAACTaGACATTTTTCCTCCTTTTC | + |
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Preference number: 3 (lower is better) Translates to: LITVSFEILLKSKQPLLSQEYPN*TFFLLF Trigger: GAAAAGGAGGAAAAATGTCAAGTTAGGGTATTCCTG...TGAAAGAAGTGGCTGCTTGCTCTTAAGAAGAATTTCAAAGCTAACAGTGATGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000134759.3 |
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| 3UTR CCA 72 bp | GAAATAGCATTACTTCTAAAGTACTTTTCAGAAAGATaGTGCCAGATGACTGTGACACCAGCAGCTTCTAAA | + |
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Preference number: 3 (lower is better) Translates to: EIALLLKYFSER*CQMTVTPAASK Trigger: TTTAGAAGCTGCTGGTGTCACAGTCATCTGGCACCATCTTTCTGAAAAGTACTTTAGAAGTAATGCTATTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134759.3 |
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| CDS-3UTR TCA 90 bp | TTTAGCAGCCAAGCCAAGACGGCGGAATTCAGGGGCGACAGAGAGAGCTGTGACACAGGTCGTCGCAGGTaGAGGCCCGGAGCGTGGTCA | + |
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Preference number: 4 (lower is better) Translates to: FSSQAKTAEFRGDRESCDTGRRR*RPGAWS Trigger: TGACCACGCTCCGGGCCTTCACCTGCGACGACCTGT...GTCACAGCTCTCTCTGTCGCCCCTGAATTCCGCCGTCTTGGCTTGGCTGCTAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000149461.3 ENSMUST00000165635.2 |
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| CDS-3UTR TCA 90 bp | AAGACGGCGGAATTCAGGGGCGACAGAGAGAGCTGTGACATGTCCATGCCATTCACAGGTCGTCGCAGGTaGAGGCCCGGAGCGTGGTCA | + |
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Preference number: 4 (lower is better) Translates to: KTAEFRGDRESCDMSMPFTGRRR*RPGAWS Trigger: TGACCACGCTCCGGGCCTTCACCTGCGACGACCTGT...GAATGGCATGGACATGTCACAGCTCTCTCTGTCGCCCCTGAATTCCGCCGTCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000149461.3 ENSMUST00000165635.2 |
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| CDS-3UTR TCA 90 bp | TTAGCAGCCAAGCCAAGACGGCGGAATTCAGGGGCGACAGAGAGAGCTGTGACAGTGCTTCAGCGACGATaGAATACTCTGGCCAGTGCG | + |
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Preference number: 4 (lower is better) Translates to: LAAKPRRRNSGATERAVTVLQRR*NTLASA Trigger: CGCACTGGCCAGAGTATTTCATCGTCGCTGAAGCAC...TGTCACAGCTCTCTCTGTCGCCCCTGAATTCCGCCGTCTTGGCTTGGCTGCTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000149461.3 ENSMUST00000165635.2 |
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| 3UTR CAA 72 bp | CACAGCAGGGGAGACAGGTCCCACCTACCTGTGCTGTaGCTGCTGTCTGTGTACAACCAGGGTTACTGTGAG | + |
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Preference number: 4 (lower is better) Translates to: HSRGDRSHLPVL*LLSVYNQGYCE Trigger: CTCACAGTAACCCTGGTTGTACACAGACAGCAGCAACAGCACAGGTAGGTGGGACCTGTCTCCCCTGCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134759.3 |
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| CDS-3UTR TCA 90 bp | AAGACGGCGGAATTCAGGGGCGACAGAGAGAGCTGTGACATGTCCATGCCATTCGTGCTTCAGCGACGATaGAATACTCTGGCCAGTGCG | + |
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Preference number: 4 (lower is better) Translates to: KTAEFRGDRESCDMSMPFVLQRR*NTLASA Trigger: CGCACTGGCCAGAGTATTTCATCGTCGCTGAAGCAC...GAATGGCATGGACATGTCACAGCTCTCTCTGTCGCCCCTGAATTCCGCCGTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000149461.3 ENSMUST00000165635.2 |
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| 3UTR CAA 72 bp | CTGGAAGCCATGTATGCCAGAAAGACCCAGGCTCTATaGAGCAGGGCTGCTGGAGACACTATGGAGCCACTT | + |
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Preference number: 4 (lower is better) Translates to: LEAMYARKTQAL*SRAAGDTMEPL Trigger: AAGTGGCTCCATAGTGTCTCCAGCAGCCCTGCTCAATAGAGCCTGGGTCTTTCTGGCATACATGGCTTCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134759.3 |
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| CDS-3UTR CCA 90 bp | AAGACGGCGGAATTCAGGGGCGACAGAGAGAGCTGTGACATGTCCATGCCATTCGACGATGAAATACTCTaGCCAGTGCGCAAGGTACTG | + |
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Preference number: 4 (lower is better) Translates to: KTAEFRGDRESCDMSMPFDDEIL*PVRKVL Trigger: CAGTACCTTGCGCACTGGCCAGAGTATTTCATCGTC...GAATGGCATGGACATGTCACAGCTCTCTCTGTCGCCCCTGAATTCCGCCGTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149461.3 |
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| CDS-3UTR TCA 90 bp | GATCATCCTATGAAAGTAGTATGTCCACAAACTGTCTGGAACACCTGCCTAAGAACAGGTCGTCGCAGGTaGAGGCCCGGAGCGTGGTCA | + |
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Preference number: 4 (lower is better) Translates to: DHPMKVVCPQTVWNTCLRTGRRR*RPGAWS Trigger: TGACCACGCTCCGGGCCTTCACCTGCGACGACCTGT...TCTTAGGCAGGTGTTCCAGACAGTTTGTGGACATACTACTTTCATAGGATGATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002805.14 ENSMUST00000110000.8 |
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| CDS-3UTR TCA 90 bp | TCACTGTTAGCTTTGAAATTCTTCTTAAGAGCAAGCAGCCACTTCTTTCAGAACACAGGTCGTCGCAGGTaGAGGCCCGGAGCGTGGTCA | + |
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Preference number: 4 (lower is better) Translates to: SLLALKFFLRASSHFFQNTGRRR*RPGAWS Trigger: TGACCACGCTCCGGGCCTTCACCTGCGACGACCTGT...GTTCTGAAAGAAGTGGCTGCTTGCTCTTAAGAAGAATTTCAAAGCTAACAGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134759.3 |
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| CDS-3UTR CCA 90 bp | ATATATGTGCAGCAGTGGTTCTCAGGCACAGGATTTAGGAGGAGGATGGAGGGAGACGATGAAATACTCTaGCCAGTGCGCAAGGTACTG | + |
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Preference number: 4 (lower is better) Translates to: IYVQQWFSGTGFRRRMEGDDEIL*PVRKVL Trigger: CAGTACCTTGCGCACTGGCCAGAGTATTTCATCGTC...TCCCTCCATCCTCCTCCTAAATCCTGTGCCTGAGAACCACTGCTGCACATATAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002805.14 ENSMUST00000110000.8 |
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| CDS-3UTR CCA 90 bp | AGTAACTCCATAAGTTTAGCAGCCAAGCCAAGACGGCGGAATTCAGGGGCGACAGACGATGAAATACTCTaGCCAGTGCGCAAGGTAATG | + |
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Preference number: 4 (lower is better) Translates to: SNSISLAAKPRRRNSGATDDEIL*PVRKVM Trigger: CATTACCTTGCGCACTGGCCAGAGTATTTCATCGTC...TGTCGCCCCTGAATTCCGCCGTCTTGGCTTGGCTGCTAAACTTATGGAGTTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165635.2 |
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| CDS-3UTR TCA 90 bp | ACATGTATGCTATTGCTCATTGGAAGGATGAGATTTGAAGTTTATAGCCTGCATACAGGTCGTCGCAGGTaGAGGCCCGGAGCGTGGTCA | + |
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Preference number: 4 (lower is better) Translates to: TCMLLLIGRMRFEVYSLHTGRRR*RPGAWS Trigger: TGACCACGCTCCGGGCCTTCACCTGCGACGACCTGT...ATGCAGGCTATAAACTTCAAATCTCATCCTTCCAATGAGCAATAGCATACATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002805.14 ENSMUST00000110000.8 |
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| CDS-3UTR GCA 90 bp | AACTCCATAAGTTTAGCAGCCAAGCCAAGACGGCGGAATTCAGGGGCGACAGAGTGCTTTGCCCATAACTaGCAACAGAAAATCACACCA | + |
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Preference number: 4 (lower is better) Translates to: NSISLAAKPRRRNSGATECFAHN*QQKITP Trigger: TGGTGTGATTTTCTGTTGGCAGTTATGGGCAAAGCA...CTCTGTCGCCCCTGAATTCCGCCGTCTTGGCTTGGCTGCTAAACTTATGGAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149461.3 |
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| CDS-3UTR TCA 90 bp | ATATATGTGCAGCAGTGGTTCTCAGGCACAGGATTTAGGAGGAGGATGGAGGGACTGAGTAGTACTCTATaGCTGTCCTGTAGACACTGT | + |
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Preference number: 4 (lower is better) Translates to: IYVQQWFSGTGFRRRMEGLSSTL*LSCRHC Trigger: ACAGTGTCTACAGGACAGTCATAGAGTACTACTCAG...TCCCTCCATCCTCCTCCTAAATCCTGTGCCTGAGAACCACTGCTGCACATATAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002805.14 ENSMUST00000110000.8 |
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| CDS-3UTR TCA 90 bp | CAGGATTTAGGAGGAGGATGGAGGGAGTCTTTTCTTGGCATGTACTGTCAACCACTGAGTAGTACTCTATaGCTGTCCTGTAGACACTGT | + |
|
Preference number: 4 (lower is better) Translates to: QDLGGGWRESFLGMYCQPLSSTL*LSCRHC Trigger: ACAGTGTCTACAGGACAGTCATAGAGTACTACTCAG...TGGTTGACAGTACATGCCAAGAAAAGACTCCCTCCATCCTCCTCCTAAATCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002805.14 ENSMUST00000110000.8 |
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| CDS-3UTR TCA 90 bp | GATCATCCTATGAAAGTAGTATGTCCACAAACTGTCTGGAACACCTGCCTAAGATCAGGCCTCACGGGATaGGGTAATGGGATGATGGAT | + |
|
Preference number: 4 (lower is better) Translates to: DHPMKVVCPQTVWNTCLRSGLTG*GNGMMD Trigger: ATCCATCATCCCATTACCTCATCCCGTGAGGCCTGA...TCTTAGGCAGGTGTTCCAGACAGTTTGTGGACATACTACTTTCATAGGATGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002805.14 ENSMUST00000110000.8 |
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| CDS-3UTR GCA 90 bp | AGTCTTTTCTTGGCATGTACTGTCAACCATGATAGTGGAACGAGTCCTTCTGACCATCAGGCTCCCCATTaGTGGCTGAGTAGTACTCTA | + |
|
Preference number: 4 (lower is better) Translates to: SLFLACTVNHDSGTSPSDHQAPH*WLSSTL Trigger: TAGAGTACTACTCAGCCAGCAATGGGGAGCCTGATG...GTCAGAAGGACTCGTTCCACTATCATGGTTGACAGTACATGCCAAGAAAAGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002805.14 ENSMUST00000110000.8 |
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| CDS-3UTR CCA 90 bp | ATATATGTGCAGCAGTGGTTCTCAGGCACAGGATTTAGGAGGAGGATGGAGGGATCTTCTCAGTGTCCCTaGAAAGTGCTTTCCTCATAT | + |
|
Preference number: 4 (lower is better) Translates to: IYVQQWFSGTGFRRRMEGSSQCP*KVLSSY Trigger: ATATGAGGAAAGCACTTTCCAGGGACACTGAGAAGA...TCCCTCCATCCTCCTCCTAAATCCTGTGCCTGAGAACCACTGCTGCACATATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002805.14 ENSMUST00000110000.8 |
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| 3UTR CAA 72 bp | AGTGGAACTGTGTCATGTAGTCTTTACCTTAACAGCTaGTGGGCAAACCTGAGGCCACTCCCTCTCAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SGTVSCSLYLNS*WANLRPLPLSF Trigger: AAAACTGAGAGGGAGTGGCCTCAGGTTTGCCCACAAGCTGTTAAGGTAAAGACTACATGACACAGTTCCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134759.3 |
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| CDS-3UTR TCA 90 bp | CAGGATTTAGGAGGAGGATGGAGGGAGTCTTTTCTTGGCATGTACTGTCAACCAATGTTGACGGCAACTTaGTTGGATACTCTTACGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QDLGGGWRESFLGMYCQPMLTAT*LDTLTK Trigger: CTTCGTAAGAGTATCCAATCAAGTTGCCGTCAACAT...TGGTTGACAGTACATGCCAAGAAAAGACTCCCTCCATCCTCCTCCTAAATCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002805.14 ENSMUST00000110000.8 |
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| CDS-3UTR TCA 90 bp | CAGGATTTAGGAGGAGGATGGAGGGAGTCTTTTCTTGGCATGTACTGTCAACCAACTGCTTGTACATGTTaGCGGCAACTTGATTGGATA | + |
|
Preference number: 4 (lower is better) Translates to: QDLGGGWRESFLGMYCQPTACTC*RQLDWI Trigger: TATCCAATCAAGTTGCCGTCAACATGTACAAGCAGT...TGGTTGACAGTACATGCCAAGAAAAGACTCCCTCCATCCTCCTCCTAAATCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002805.14 ENSMUST00000110000.8 |
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| CDS-3UTR TCA 90 bp | CAGGATTTAGGAGGAGGATGGAGGGAGTCTTTTCTTGGCATGTACTGTCAACCAGATGAGGTAATGGGATaGTGGATTTCTTCTCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QDLGGGWRESFLGMYCQPDEVMG*WISSQC Trigger: ACACTGAGAAGAAATCCATCATCCCATTACCTCATC...TGGTTGACAGTACATGCCAAGAAAAGACTCCCTCCATCCTCCTCCTAAATCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002805.14 ENSMUST00000110000.8 |
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| CDS-3UTR GCA 90 bp | AGGAGGATGGAGGGAGTCTTTTCTTGGCATGTACTGTCAACCATGATAGTGGAAAGCTACCGAGCCTTCTaGTTTGCCCATAATATAACC | + |
|
Preference number: 4 (lower is better) Translates to: RRMEGVFSWHVLSTMIVESYRAF*FAHNIT Trigger: GGTTATATTATGGGCAAAGCAGAAGGCTCGGTAGCT...TTCCACTATCATGGTTGACAGTACATGCCAAGAAAAGACTCCCTCCATCCTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110000.8 |
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| CDS-3UTR CCA 90 bp | GATCATCCTATGAAAGTAGTATGTCCACAAACTGTCTGGAACACCTGCCTAAGAGACGATGAAATACTCTaGCCAGTGCGCAAGGTACTG | + |
|
Preference number: 4 (lower is better) Translates to: DHPMKVVCPQTVWNTCLRDDEIL*PVRKVL Trigger: CAGTACCTTGCGCACTGGCCAGAGTATTTCATCGTC...TCTTAGGCAGGTGTTCCAGACAGTTTGTGGACATACTACTTTCATAGGATGATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002805.14 ENSMUST00000110000.8 |
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| CDS-3UTR TCA 90 bp | AGTCAAAACAAGAGGCACCACATCCTAAACAAAGATCCGTCCATAATTTTGATTGTGCTTCAGCGACGATaGAATACTCTGGCCAGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: SQNKRHHILNKDPSIILIVLQRR*NTLASA Trigger: CGCACTGGCCAGAGTATTTCATCGTCGCTGAAGCAC...AATCAAAATTATGGACGGATCTTTGTTTAGGATGTGGTGCCTCTTGTTTTGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002805.14 ENSMUST00000110000.8 |
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| CDS-3UTR TCA 90 bp | GCCTTGATTGAATTTTACTATGGCAAACAGTTCGAACATGTATGCTATTGCTCAGTGCTTCAGCGACGATaGAATACTCTGGCCAGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: ALIEFYYGKQFEHVCYCSVLQRR*NTLASA Trigger: CGCACTGGCCAGAGTATTTCATCGTCGCTGAAGCAC...TGAGCAATAGCATACATGTTCGAACTGTTTGCCATAGTAAAATTCAATCAAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002805.14 ENSMUST00000110000.8 |
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| CDS-3UTR TCA 90 bp | CTCCTAATAGAGCTCCAAGATCATCCTATGAAAGTAGTATGTCCACAAACTGTCCTCCCCATTGCTGGCTaGGTAGTACTCTATGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLIELQDHPMKVVCPQTVLPIAG*VVLYDC Trigger: ACAGTCATAGAGTACTACTCAGCCAGCAATGGGGAG...GACAGTTTGTGGACATACTACTTTCATAGGATGATCTTGGAGCTCTATTAGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002805.14 ENSMUST00000110000.8 |
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| CDS-3UTR GCA 90 bp | CTCCTAATAGAGCTCCAAGATCATCCTATGAAAGTAGTATGTCCACAAACTGTCGCTGTGACATGTCCATaGCATTCTTCCCTAGCTACC | + |
|
Preference number: 4 (lower is better) Translates to: LLIELQDHPMKVVCPQTVAVTCP*HSSLAT Trigger: GGTAGCTAGGGAAGAATGGCATGGACATGTCACAGC...GACAGTTTGTGGACATACTACTTTCATAGGATGATCTTGGAGCTCTATTAGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002805.14 ENSMUST00000110000.8 |
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| CDS-3UTR TCA 90 bp | AGTCAAAACAAGAGGCACCACATCCTAAACAAAGATCCGTCCATAATTTTGATTTCAGGCCTCACGGGATaGGGTAATGGGATGATGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SQNKRHHILNKDPSIILISGLTG*GNGMMD Trigger: ATCCATCATCCCATTACCTCATCCCGTGAGGCCTGA...AATCAAAATTATGGACGGATCTTTGTTTAGGATGTGGTGCCTCTTGTTTTGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002805.14 ENSMUST00000110000.8 |
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| CDS-3UTR TCA 90 bp | GATCATCCTATGAAAGTAGTATGTCCACAAACTGTCTGGAACACCTGCCTAAGAACTGCTTGTACATGTTaGCGGCAACTTGATTGGATA | + |
|
Preference number: 4 (lower is better) Translates to: DHPMKVVCPQTVWNTCLRTACTC*RQLDWI Trigger: TATCCAATCAAGTTGCCGTCAACATGTACAAGCAGT...TCTTAGGCAGGTGTTCCAGACAGTTTGTGGACATACTACTTTCATAGGATGATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002805.14 ENSMUST00000110000.8 |
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| CDS-3UTR TCA 90 bp | GCCTTGATTGAATTTTACTATGGCAAACAGTTCGAACATGTATGCTATTGCTCACTCCCCATTGCTGGCTaGGTAGTACTCTATGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: ALIEFYYGKQFEHVCYCSLPIAG*VVLYDC Trigger: ACAGTCATAGAGTACTACTCAGCCAGCAATGGGGAG...TGAGCAATAGCATACATGTTCGAACTGTTTGCCATAGTAAAATTCAATCAAGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002805.14 ENSMUST00000110000.8 |
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| CDS-3UTR GCA 90 bp | ACATGTATGCTATTGCTCATTGGAAGGATGAGATTTGAAGTTTATAGCCTGCATGCTGTGACATGTCCATaGCATTCTTCCCTAGCTACC | + |
|
Preference number: 4 (lower is better) Translates to: TCMLLLIGRMRFEVYSLHAVTCP*HSSLAT Trigger: GGTAGCTAGGGAAGAATGGCATGGACATGTCACAGC...ATGCAGGCTATAAACTTCAAATCTCATCCTTCCAATGAGCAATAGCATACATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002805.14 ENSMUST00000110000.8 |
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| CDS-3UTR GCA 90 bp | GCCTTGATTGAATTTTACTATGGCAAACAGTTCGAACATGTATGCTATTGCTCACATCAGGCTCCCCATTaGTGGCTGAGTAGTACTCTA | + |
|
Preference number: 4 (lower is better) Translates to: ALIEFYYGKQFEHVCYCSHQAPH*WLSSTL Trigger: TAGAGTACTACTCAGCCAGCAATGGGGAGCCTGATG...TGAGCAATAGCATACATGTTCGAACTGTTTGCCATAGTAAAATTCAATCAAGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002805.14 ENSMUST00000110000.8 |
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| CDS-3UTR GCA 90 bp | AATAGAGCTCCAAGATCATCCTATGAAAGTAGTATGTCCACAAACTGTCTGGAAAGTGTCCCTGGAAAGTaGTTTCCTCATATCATAGGC | + |
|
Preference number: 4 (lower is better) Translates to: NRAPRSSYESSMSTNCLESVPGK*FPHIIG Trigger: GCCTATGATATGAGGAAAGCACTTTCCAGGGACACT...TTCCAGACAGTTTGTGGACATACTACTTTCATAGGATGATCTTGGAGCTCTATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002805.14 ENSMUST00000110000.8 |
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| 3UTR CAA 72 bp | CATGATAGTGGAACGAGTCCTTCTGACTTAGCTGCCTaGATTGAATTTTACTATGGCAAACAGTTCGAACAT | + |
|
Preference number: 4 (lower is better) Translates to: HDSGTSPSDLAA*IEFYYGKQFEH Trigger: ATGTTCGAACTGTTTGCCATAGTAAAATTCAATCAAGGCAGCTAAGTCAGAAGGACTCGTTCCACTATCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002805.14 ENSMUST00000110000.8 |
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| CDS-3UTR TCA 90 bp | ACATGTATGCTATTGCTCATTGGAAGGATGAGATTTGAAGTTTATAGCCTGCATATGTTGACGGCAACTTaGTTGGATACTCTTACGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TCMLLLIGRMRFEVYSLHMLTAT*LDTLTK Trigger: CTTCGTAAGAGTATCCAATCAAGTTGCCGTCAACAT...ATGCAGGCTATAAACTTCAAATCTCATCCTTCCAATGAGCAATAGCATACATGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002805.14 ENSMUST00000110000.8 |
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| CDS-3UTR TCA 90 bp | ACATGTATGCTATTGCTCATTGGAAGGATGAGATTTGAAGTTTATAGCCTGCATGATGAGGTAATGGGATaGTGGATTTCTTCTCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TCMLLLIGRMRFEVYSLHDEVMG*WISSQC Trigger: ACACTGAGAAGAAATCCATCATCCCATTACCTCATC...ATGCAGGCTATAAACTTCAAATCTCATCCTTCCAATGAGCAATAGCATACATGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002805.14 ENSMUST00000110000.8 |
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| CDS-3UTR CCA 90 bp | GCCTTGATTGAATTTTACTATGGCAAACAGTTCGAACATGTATGCTATTGCTCATCTTCTCAGTGTCCCTaGAAAGTGCTTTCCTCATAT | + |
|
Preference number: 4 (lower is better) Translates to: ALIEFYYGKQFEHVCYCSSSQCP*KVLSSY Trigger: ATATGAGGAAAGCACTTTCCAGGGACACTGAGAAGA...TGAGCAATAGCATACATGTTCGAACTGTTTGCCATAGTAAAATTCAATCAAGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002805.14 ENSMUST00000110000.8 |
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| 3UTR CAA 72 bp | ATTTTACTATGGCAAACAGTTCGAACATGTATGCTATaGCTCATTGGAAGGATGAGATTTGAAGTTTATAGC | + |
|
Preference number: 4 (lower is better) Translates to: ILLWQTVRTCML*LIGRMRFEVYS Trigger: GCTATAAACTTCAAATCTCATCCTTCCAATGAGCAATAGCATACATGTTCGAACTGTTTGCCATAGTAAAAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002805.14 ENSMUST00000110000.8 |
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| CDS-3UTR CAA 90 bp | TTTAGCAGCCAAGCCAAGACGGCGGAATTCAGGGGCGACAGAGAGAGCTGTGACCGCAAGGTAATGTTGTaGAAGCGGAACAGGTCGTCG | + |
|
Preference number: 5 (lower is better) Translates to: FSSQAKTAEFRGDRESCDRKVML*KRNRSS Trigger: CGACGACCTGTTCCGCTTCAACAACATTACCTTGCG...GTCACAGCTCTCTCTGTCGCCCCTGAATTCCGCCGTCTTGGCTTGGCTGCTAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165635.2 |
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| CDS-3UTR CAA 90 bp | AAGTTTAGCAGCCAAGCCAAGACGGCGGAATTCAGGGGCGACAGAGAGAGCTGTGTGCGCAAGGTAATGTaGTTGAAGCGGAACAGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: KFSSQAKTAEFRGDRESCVRKVM*LKRNRS Trigger: CGACCTGTTCCGCTTCAACAACATTACCTTGCGCAC...ACAGCTCTCTCTGTCGCCCCTGAATTCCGCCGTCTTGGCTTGGCTGCTAAACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165635.2 |
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| CDS-3UTR CAA 90 bp | GCAGGGCTGCTGGAGACACTATGGAGCCACTTACCCTCTCTAGGTCTGGTTCACGGATCCAAGTTAATGTaGTTGAAGCGGAACAGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: AGLLETLWSHLPSLGLVHGSKLM*LKRNRS Trigger: CGACCTGTTCCGCTTCAACAACATTAACTTGGATCC...GTGAACCAGACCTAGAGAGGGTAAGTGGCTCCATAGTGTCTCCAGCAGCCCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134759.3 |
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| CDS-3UTR CAA 90 bp | TTTAGCAGCCAAGCCAAGACGGCGGAATTCAGGGGCGACAGAGAGAGCTGTGACGGATCCAAGTTAATGTaGTTGAAGCGGAACAGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: FSSQAKTAEFRGDRESCDGSKLM*LKRNRS Trigger: CGACCTGTTCCGCTTCAACAACATTAACTTGGATCC...GTCACAGCTCTCTCTGTCGCCCCTGAATTCCGCCGTCTTGGCTTGGCTGCTAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149461.3 |
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| CDS-3UTR CAA 90 bp | GAAATTTCTTCTAGTAACTCCATAAGTTTAGCAGCCAAGCCAAGACGGCGGAATACCGAGCCTTCTGCTTaGCCCATAACTGCCAACAGA | + |
|
Preference number: 5 (lower is better) Translates to: EISSSNSISLAAKPRRRNTEPSA*PITANR Trigger: TCTGTTGGCAGTTATGGGCAAAGCAGAAGGCTCGGT...ATTCCGCCGTCTTGGCTTGGCTGCTAAACTTATGGAGTTACTAGAAGAAATTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149461.3 |
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| CDS-3UTR CAA 90 bp | GATCATCCTATGAAAGTAGTATGTCCACAAACTGTCTGGAACACCTGCCTAAGAGGATCCAAGTTAATGTaGTTGAAGCGGAACAGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: DHPMKVVCPQTVWNTCLRGSKLM*LKRNRS Trigger: CGACCTGTTCCGCTTCAACAACATTAACTTGGATCC...TCTTAGGCAGGTGTTCCAGACAGTTTGTGGACATACTACTTTCATAGGATGATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002805.14 ENSMUST00000110000.8 |
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| CDS-3UTR CAA 90 bp | ACATGTATGCTATTGCTCATTGGAAGGATGAGATTTGAAGTTTATAGCCTGCATGGATCCAAGTTAATGTaGTTGAAGCGGAACAGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: TCMLLLIGRMRFEVYSLHGSKLM*LKRNRS Trigger: CGACCTGTTCCGCTTCAACAACATTAACTTGGATCC...ATGCAGGCTATAAACTTCAAATCTCATCCTTCCAATGAGCAATAGCATACATGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002805.14 ENSMUST00000110000.8 |
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| CDS-3UTR CAA 90 bp | AGTCAAAACAAGAGGCACCACATCCTAAACAAAGATCCGTCCATAATTTTGATTCATGTTGACGGCAACTaGATTGGATACTCTTACGAA | + |
|
Preference number: 5 (lower is better) Translates to: SQNKRHHILNKDPSIILIHVDGN*IGYSYE Trigger: TTCGTAAGAGTATCCAATCAAGTTGCCGTCAACATG...AATCAAAATTATGGACGGATCTTTGTTTAGGATGTGGTGCCTCTTGTTTTGACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002805.14 ENSMUST00000110000.8 |
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| CDS CCA 72 bp | TTCTCCGCCAGGTGCTTCAGCGACGATGAAATACTCTaGCCAGTGCGCAAGGTAATGTTGTTGAAGCGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: FSARCFSDDEIL*PVRKVMLLKRN Trigger: GTTCCGCTTCAACAACATTACCTTGCGCACTGGCCAGAGTATTTCATCGTCGCTGAAGCACCTGGCGGAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165635.2 |
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| CDS CCA 72 bp | TTCTCCGCCAGGTGCTTCAGCGACGATGAAATACTCTaGCCAGTGCGCAAGGTAAGTTTCTGTAAGTGGATC | + |
|
Preference number: 6 (lower is better) Translates to: FSARCFSDDEIL*PVRKVSFCKWI Trigger: GATCCACTTACAGAAACTTACCTTGCGCACTGGCCAGAGTATTTCATCGTCGCTGAAGCACCTGGCGGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169732.8 |
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| CDS TCA 72 bp | CATCAGGCTCCCCATTGCTGGCTGAGTAGTACTCTATaGCTGTCCTGTAGACACTGTAACCCAACTGCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: HQAPHCWLSSTL*LSCRHCNPTAC Trigger: ACAAGCAGTTGGGTTACAGTGTCTACAGGACAGTCATAGAGTACTACTCAGCCAGCAATGGGGAGCCTGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002805.14 ENSMUST00000110000.8 |
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| CDS TCA 72 bp | ATCATAGGCATCCTCATCAGGCTCCCCATTGCTGGCTaGGTAGTACTCTATGACTGTCCTGTAGACACTGTA | + |
|
Preference number: 6 (lower is better) Translates to: IIGILIRLPIAG*VVLYDCPVDTV Trigger: TACAGTGTCTACAGGACAGTCATAGAGTACTACTCAGCCAGCAATGGGGAGCCTGATGAGGATGCCTATGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002805.14 ENSMUST00000110000.8 |
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