RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NAA16 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000022020

Ensembl transcript IDs: ENSMUST00000022597.15, ENSMUST00000163486.2, ENSMUST00000169500.2

Found 299 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACCCATGCGGGTCTGGGCCAGAGCGGTAGCACCAGGAAGGAAGCATaGAGGCAGGAATGCCACACACCCTGGTTTCTGGTCTGGCTTTGC +
Preference number: 1 (lower is better)
Translates to: THAGLGQSGSTRKEA*RQECHTPWFLVWLC
Trigger: GCAAAGCCAGACCAGAAACCAGGGTGTGTGGCATTCCTGCCTGCATGCTTCCTTCCTGGTGCTACCGCTCTGGCCCAGACCCGCATGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR CCA 90 bp GGAACCTGCAGCATCAGTAAGCAGCTAACCCTCCTGCAATTGCTCTaGCTACCCATGCGGGTCTGGGCCAGAGCGGTAGCACCAGGAAGG +
Preference number: 1 (lower is better)
Translates to: GTCSISKQLTLLQLL*LPMRVWARAVAPGR
Trigger: CCTTCCTGGTGCTACCGCTCTGGCCCAGACCCGCATGGGTAGCCAGAGCAATTGCAGGAGGGTTAGCTGCTTACTGATGCTGCAGGTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR TCA 90 bp CTGCCCTGGCTAGCCTCAGTGGCTAAGCCTAATTTTGCAGAGCCTTaGTGTGCCAGGGTTGGAGGGATACCCACGGGGCTCCACTCTCTC +
Preference number: 1 (lower is better)
Translates to: LPWLASVAKPNFAEP*CARVGGIPTGLHSL
Trigger: GAGAGAGTGGAGCCCCGTGGGTATCCCTCCAACCCTGGCACATCAAGGCTCTGCAAAATTAGGCTTAGCCACTGAGGCTAGCCAGGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR TCA 90 bp TCAGCGGCAGCCTCCTGGGTGAAACTGCTCTGGGGTGCTGCTTGCTaGCTTCCTCATAAAGCTGAAGCCTCTCGTCTAGAGAACGAAGTT +
Preference number: 1 (lower is better)
Translates to: SAAASWVKLLWGAAC*LPHKAEASRLENEV
Trigger: AACTTCGTTCTCTAGACGAGAGGCTTCAGCTTTATGAGGAAGTCAGCAAGCAGCACCCCAGAGCAGTTTCACCCAGGAGGCTGCCGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169500.2
3UTR CCA 90 bp TCTGGGACCTGTTCTCAGGGGCTTTCTTGTTGGACAGACAGGACCTaGACCTCACACCAGGTCAGCCTGATACTACGAGATTACTGGGGA +
Preference number: 1 (lower is better)
Translates to: SGTCSQGLSCWTDRT*TSHQVSLILRDYWG
Trigger: TCCCCAGTAATCTCGTAGTATCAGGCTGACCTGGTGTGAGGTCCAGGTCCTGTCTGTCCAACAAGAAAGCCCCTGAGAACAGGTCCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR GCA 90 bp CAAGGAGCGAACTTGGGCCAGTGTGTACTCCTGAGCCATCTCTTCTaGACCACCCTCCACACCAATGCCTTTGAAAGGCTGCTGTTGAAA +
Preference number: 1 (lower is better)
Translates to: QGANLGQCVLLSHLF*TTLHTNAFERLLLK
Trigger: TTTCAACAGCAGCCTTTCAAAGGCATTGGTGTGGAGGGTGGTGCAGAAGAGATGGCTCAGGAGTACACACTGGCCCAAGTTCGCTCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR GCA 90 bp CAGCACCAAACATCTTTCTGGCATCTCCAGCATCCTAGAATCACCTaGTCAGGGATTCCCTGCAGGGAACTTAGCCCTGGCTCTTCTGCT +
Preference number: 1 (lower is better)
Translates to: QHQTSFWHLQHPRIT*SGIPCRELSPGSSA
Trigger: AGCAGAAGAGCCAGGGCTAAGTTCCCTGCAGGGAATCCCTGAGCAGGTGATTCTAGGATGCTGGAGATGCCAGAAAGATGTTTGGTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR CCA 90 bp GTCTTTATGTCAGGCTTGGTGGTGCAGGTCTTTCATGTCAACACTTaGAGGCAGAGGCAGGTGGATGTTAGTGAGCACAAGGCCAGCCTG +
Preference number: 1 (lower is better)
Translates to: VFMSGLVVQVFHVNT*RQRQVDVSEHKASL
Trigger: CAGGCTGGCCTTGTGCTCACTAACATCCACCTGCCTCTGCCTCCAAGTGTTGACATGAAAGACCTGCACCACCAAGCCTGACATAAAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR CCA 90 bp CGTGGAATTGTTCATCTCTACAGAGGGCAGCCACCAGCAACCTACTaGATCAGGAACCCACGCACCATCAAAGAGGAAAAGCATCCGTGG +
Preference number: 1 (lower is better)
Translates to: RGIVHLYRGQPPATY*IRNPRTIKEEKHPW
Trigger: CCACGGATGCTTTTCCTCTTTGATGGTGCGTGGGTTCCTGATCCAGTAGGTTGCTGGTGGCTGCCCTCTGTAGAGATGAACAATTCCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR CCA 90 bp CAGTCTCCATCAGGAGAGTGGAGCTGGTACTTAGAACTGGCAAGGTaGCTCAGCAGGTACAAGCACTTGGTACACAAACCTGACAACATG +
Preference number: 1 (lower is better)
Translates to: QSPSGEWSWYLELAR*LSRYKHLVHKPDNM
Trigger: CATGTTGTCAGGTTTGTGTACCAAGTGCTTGTACCTGCTGAGCCACCTTGCCAGTTCTAAGTACCAGCTCCACTCTCCTGATGGAGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR GCA 90 bp GGTCATATGTCAGTGGTCATCCACAGGTGGCCAGAGCTACCCAGATaGACAGAAAGGACTGTCCGACAGCTGTACTTTTGTTGTTGTTGT +
Preference number: 1 (lower is better)
Translates to: GHMSVVIHRWPELPR*TERTVRQLYFCCCC
Trigger: ACAACAACAACAAAAGTACAGCTGTCGGACAGTCCTTTCTGTGCATCTGGGTAGCTCTGGCCACCTGTGGATGACCACTGACATATGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR TCA 90 bp GCACAGCAGAAGGAAAGCATGCCCTGCGTAGAGATAAAGAGATTCTaGCTGACAGTCTCCATCAGGAGAGTGGAGCTGGTACTTAGAACT +
Preference number: 1 (lower is better)
Translates to: AQQKESMPCVEIKRF*LTVSIRRVELVLRT
Trigger: AGTTCTAAGTACCAGCTCCACTCTCCTGATGGAGACTGTCAGTCAGAATCTCTTTATCTCTACGCAGGGCATGCTTTCCTTCTGCTGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR TCA 90 bp ATACTGAGTTGGAAAGCCTGCCCTCTAGTGGGAGAAATAACGAACTaGCCGCCCAACTGCATCATTTCAGAAACCACGGTCCTGAACCAA +
Preference number: 1 (lower is better)
Translates to: ILSWKACPLVGEITN*PPNCIISETTVLNQ
Trigger: TTGGTTCAGGACCGTGGTTTCTGAAATGATGCAGTTGGGCGGTCAGTTCGTTATTTCTCCCACTAGAGGGCAGGCTTTCCAACTCAGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR TCA 90 bp TTTTGGCCCTGGTGGTGTTTTCTGGTCCACAGCACCTACAAACCTTaGAACCTCCCAGATGATGCTTTGGAACCAAGTCCTAATGAGGTG +
Preference number: 1 (lower is better)
Translates to: FWPWWCFLVHSTYKP*NLPDDALEPSPNEV
Trigger: CACCTCATTAGGACTTGGTTCCAAAGCATCATCTGGGAGGTTTCAAGGTTTGTAGGTGCTGTGGACCAGAAAACACCACCAGGGCCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR GCA 90 bp ACTCTGCCAAGTCCTCCTCCCTTGAAGAAAACCTCTCAGAGTAGCTaGTTGCTAAGTCTCCAAGCAGCTCAACCACGAAAACACAATTCC +
Preference number: 1 (lower is better)
Translates to: TLPSPPPLKKTSQSS*LLSLQAAQPRKHNS
Trigger: GGAATTGTGTTTTCGTGGTTGAGCTGCTTGGAGACTTAGCAAGCAGCTACTCTGAGAGGTTTTCTTCAAGGGAGGAGGACTTGGCAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR CCA 90 bp GAGAGCTCTCAGAGACTGACCCACCAACCAAAGAGCTATATGGGGTaGTCTGAGGCTCCCCACATTAATGTACCAATTAAATGCTGCTCA +
Preference number: 1 (lower is better)
Translates to: ESSQRLTHQPKSYMG*SEAPHINVPIKCCS
Trigger: TGAGCAGCATTTAATTGGTACATTAATGTGGGGAGCCTCAGACCACCCCATATAGCTCTTTGGTTGGTGGGTCAGTCTCTGAGAGCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR CCA 90 bp TTGTCCTGTCTAAAAGAAATAAAGGGGCAAACATGGAGCCAAGGCTaGAGGAATGGCCAACCAATAACCAGACCCATCTCATGGGCAAGC +
Preference number: 1 (lower is better)
Translates to: LSCLKEIKGQTWSQG*RNGQPITRPISWAS
Trigger: GCTTGCCCATGAGATGGGTCTGGTTATTGGTTGGCCATTCCTCCAGCCTTGGCTCCATGTTTGCCCCTTTATTTCTTTTAGACAGGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR TCA 90 bp TCTTCTGCACCACCCTCCACACCAATGCCTTTGAAAGGCTGCTGTTaGAAGCAGTTTCCAGTGTATTCAACCAGCATCCTGTTGGCATTA +
Preference number: 1 (lower is better)
Translates to: SSAPPSTPMPLKGCC*KQFPVYSTSILLAL
Trigger: TAATGCCAACAGGATGCTGGTTGAATACACTGGAAACTGCTTTCAACAGCAGCCTTTCAAAGGCATTGGTGTGGAGGGTGGTGCAGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR TCA 90 bp ATGACAGACAGGCAGCAGAGGGGGTATTGTCTTCAAAGGGCCTACTaGCTTAACTTCTGCCAACTCCTAAAGGCTCCTCGGCTTTTAAAA +
Preference number: 1 (lower is better)
Translates to: MTDRQQRGYCLQRAY*LNFCQLLKAPRLLK
Trigger: TTTTAAAAGCCGAGGAGCCTTTAGGAGTTGGCAGAAGTTAAGTCAGTAGGCCCTTTGAAGACAATACCCCCTCTGCTGCCTGTCTGTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR GCA 90 bp CAGAGTGACACAAATATATCCCAAAAACATGAGGGAGGAGAGGTTTaGTGTGGATCATGGTTTCACGGCCCTCAGTCCATCAAAGCAGAG +
Preference number: 1 (lower is better)
Translates to: QSDTNISQKHEGGEV*CGSWFHGPQSIKAE
Trigger: CTCTGCTTTGATGGACTGAGGGCCGTGAAACCATGATCCACAGCAAACCTCTCCTCCCTCATGTTTTTGGGATATATTTGTGTCACTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR CCA 90 bp AGATATAAAAACTGCATGTTACTAGAATACAACAGGCAATGTTTCTaGGAGGAGGAAATGCCTGCGGATGCACCGCAGACAGGAAGCGCG +
Preference number: 1 (lower is better)
Translates to: RYKNCMLLEYNRQCF*EEEMPADAPQTGSA
Trigger: CGCGCTTCCTGTCTGCGGTGCATCCGCAGGCATTTCCTCCTCCCAGAAACATTGCCTGTTGTATTCTAGTAACATGCAGTTTTTATATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR CCA 90 bp CAACTGCGAAATGTCGACAACAATTTTGGCCCTGGTGGTGTTTTCTaGTCCACAGCACCTACAAACCTTGAAACCTCCCAGATGATGCTT +
Preference number: 1 (lower is better)
Translates to: QLRNVDNNFGPGGVF*STAPTNLETSQMML
Trigger: AAGCATCATCTGGGAGGTTTCAAGGTTTGTAGGTGCTGTGGACCAGAAAACACCACCAGGGCCAAAATTGTTGTCGACATTTCGCAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR TCA 90 bp TTAGCCCTGGCTCTTCTGCTTTCTCGAACTTTGGTGAAACCTCTGTaGCCCTGTAACTCTTTAAGATGCTGGCAAAACACTCCTCCTTCA +
Preference number: 1 (lower is better)
Translates to: LALALLLSRTLVKPL*PCNSLRCWQNTPPS
Trigger: TGAAGGAGGAGTGTTTTGCCAGCATCTTAAAGAGTTACAGGGTCACAGAGGTTTCACCAAAGTTCGAGAAAGCAGAAGAGCCAGGGCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR TCA 90 bp GGAGCTGATGTTACTAAGTTCAGGCAGACACAGTCAGAATTGACATaGAGTATAAGACACCCAGCTAGTATCAGGGACCTGGTCTTTGTT +
Preference number: 1 (lower is better)
Translates to: GADVTKFRQTQSELT*SIRHPASIRDLVFV
Trigger: AACAAAGACCAGGTCCCTGATACTAGCTGGGTGTCTTATACTTCATGTCAATTCTGACTGTGTCTGCCTGAACTTAGTAACATCAGCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR TCA 90 bp TTTAATTGTAGTTTAAGGTCTCATCTGAGAGATCTAAAACTTCACTaGAGGGCTGTGAGGGAGGTAGTGCTGTGTTCTAGTGTGTACTCT +
Preference number: 1 (lower is better)
Translates to: FNCSLRSHLRDLKLH*RAVREVVLCSSVYS
Trigger: AGAGTACACACTAGAACACAGCACTACCTCCCTCACAGCCCTTCAGTGAAGTTTTAGATCTCTCAGATGAGACCTTAAACTACAATTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR GCA 90 bp TCTGATTCAAACCATAGCACGCAATCCACAGCTCTCATTTCATACTaGAAATTCCATAATTTAGGATATATTCAGGGGCTGGAGATGGCT +
Preference number: 1 (lower is better)
Translates to: SDSNHSTQSTALISY*KFHNLGYIQGLEMA
Trigger: AGCCATCTCCAGCCCCTGAATATATCCTAAATTATGGAATTTGCAGTATGAAATGAGAGCTGTGGATTGCGTGCTATGGTTTGAATCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR TCA 90 bp CACCCACTCTCTTTTCTGTTTGGTTCCTGGAAAGAACGTAGGTGCTaGTTGCTATCTTTCTATAAGAAATGTGGGTTTTGTTTATGTAGG +
Preference number: 1 (lower is better)
Translates to: HPLSFLFGSWKERRC*LLSFYKKCGFCLCR
Trigger: CCTACATAAACAAAACCCACATTTCTTATAGAAAGATAGCAATCAGCACCTACGTTCTTTCCAGGAACCAAACAGAAAAGAGAGTGGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR GCA 90 bp TTTAGGAAGTACCACGGGCCTACATCTGACCACTCACATCTCAACTaGACATACACTGAATTCTCAGAAACACTAAATTATCCAAGAAAA +
Preference number: 1 (lower is better)
Translates to: FRKYHGPTSDHSHLN*TYTEFSETLNYPRK
Trigger: TTTTCTTGGATAATTTAGTGTTTCTGAGAATTCAGTGTATGTGCAGTTGAGATGTGAGTGGTCAGATGTAGGCCCGTGGTACTTCCTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR GCA 90 bp CACTCTCTTTTCTGTTTGGTTCCTGGAAAGAACGTAGGTGCTGATTaGTATCTTTCTATAAGAAATGTGGGTTTTGTTTATGTAGGATTT +
Preference number: 1 (lower is better)
Translates to: HSLFCLVPGKNVGAD*YLSIRNVGFVYVGF
Trigger: AAATCCTACATAAACAAAACCCACATTTCTTATAGAAAGATAGCAATCAGCACCTACGTTCTTTCCAGGAACCAAACAGAAAAGAGAGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR GCA 90 bp ATTTTCTCAAATACAAGACTCTTGAATAGTAGTTGCCTTGGAGTTTaGAACATAGCTTTACAACTGCTCTTAGTCCCCTTTCAACTATCA +
Preference number: 1 (lower is better)
Translates to: IFSNTRLLNSSCLGV*NIALQLLLVPFQLS
Trigger: TGATAGTTGAAAGGGGACTAAGAGCAGTTGTAAAGCTATGTTGCAAACTCCAAGGCAACTACTATTCAAGAGTCTTGTATTTGAGAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR GCA 90 bp TTGTATTGTATGCTTTTCCTCTTTGATGGTATTGGATTTATTTATTaGCTCCTTTCTTTCCTTCCTTCTTTCCTTCCTTCCTTCCTCTCT +
Preference number: 1 (lower is better)
Translates to: LYCMLFLFDGIGFIY*LLSFLPSFLPSFLS
Trigger: AGAGAGGAAGGAAGGAAGGAAAGAAGGAAGGAAAGAAAGGAGGCAATAAATAAATCCAATACCATCAAAGAGGAAAAGCATACAATACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR CCA 90 bp GTGGTGGCGCACGCCTTTAATCCAGCACTCGGGAGGCAGAGGCAGGTGGATTTCGGGTTCCCCCAAAACTaGAGCTGGGCTGTCCGTAAA +
Preference number: 2 (lower is better)
Translates to: VVAHAFNPALGRQRQVDFGFPQN*SWAVRK
Trigger: TTTACGGACAGCCCAGCTCCAGTTTTGGGGGAACCC...GAAATCCACCTGCCTCTGCCTCCCGAGTGCTGGATTAAAGGCGTGCGCCACCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR TCA 90 bp GTGGTGGCGCACGCCTTTAATCCAGCACTCGGGAGGCAGAGGCAGGTGGATTTCATCCCAGCAACCACATaGAGGCTCACAACCACCTGT +
Preference number: 2 (lower is better)
Translates to: VVAHAFNPALGRQRQVDFIPATT*RLTTTC
Trigger: ACAGGTGGTTGTGAGCCTTCATGTGGTTGCTGGGAT...GAAATCCACCTGCCTCTGCCTCCCGAGTGCTGGATTAAAGGCGTGCGCCACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR GCA 90 bp ACGCCTTTAATCCAGCACTCGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGACCACCCAGAGTGGGTaGAAGGAGCGAACTTGGGCC +
Preference number: 2 (lower is better)
Translates to: TPLIQHSGGRGRWISEFETTQSG*KERTWA
Trigger: GGCCCAAGTTCGCTCCTTGCACCCACTCTGGGTGGT...CTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCGAGTGCTGGATTAAAGGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR TCA 90 bp CAGGTGGATGTTAGTGAGCACAAGGCCAGCCTGGTCTACATGGAGAGTTCCAGGGGCCAGAAGAGGATGTaGGATCCTCAGGCTGTGAGC +
Preference number: 2 (lower is better)
Translates to: QVDVSEHKASLVYMESSRGQKRM*DPQAVS
Trigger: GCTCACAGCCTGAGGATCTCACATCCTCTTCTGGCC...CCTGGAACTCTCCATGTAGACCAGGCTGGCCTTGTGCTCACTAACATCCACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR GCA 90 bp GTGGTGGCGCACGCCTTTAATCCAGCACTCGGGAGGCAGAGGCAGGTGGATTTCGAGGGAGGAGAGGTTTaGTGTGGATCATGGTTTCAC +
Preference number: 2 (lower is better)
Translates to: VVAHAFNPALGRQRQVDFEGGEV*CGSWFH
Trigger: GTGAAACCATGATCCACAGCAAACCTCTCCTCCCTC...GAAATCCACCTGCCTCTGCCTCCCGAGTGCTGGATTAAAGGCGTGCGCCACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR CCA 90 bp GTGGTGGCGCACGCCTTTAATCCAGCACTCGGGAGGCAGAGGCAGGTGGATTTCATAAACCACCCAGAGTaGGTGCAAGGAGCGAACTTG +
Preference number: 2 (lower is better)
Translates to: VVAHAFNPALGRQRQVDFINHPE*VQGANL
Trigger: CAAGTTCGCTCCTTGCACCCACTCTGGGTGGTTTAT...GAAATCCACCTGCCTCTGCCTCCCGAGTGCTGGATTAAAGGCGTGCGCCACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR CCA 90 bp CAGGTGGATGTTAGTGAGCACAAGGCCAGCCTGGTCTACATGGAGAGTTCCAGGGTGGTCATCCACAGGTaGCCAGAGCTACCCAGATGC +
Preference number: 2 (lower is better)
Translates to: QVDVSEHKASLVYMESSRVVIHR*PELPRC
Trigger: GCATCTGGGTAGCTCTGGCCACCTGTGGATGACCAC...CCTGGAACTCTCCATGTAGACCAGGCTGGCCTTGTGCTCACTAACATCCACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR CAA 90 bp CCACTGACTGTTATAAACCACCCAGAGTGGGTGCAAGGAGCGAACTaGGGCCAGTGTGTACTCCTGAGCCATCTCTTCTGCACCACCCTC +
Preference number: 2 (lower is better)
Translates to: PLTVINHPEWVQGAN*GQCVLLSHLFCTTL
Trigger: GAGGGTGGTGCAGAAGAGATGGCTCAGGAGTACACACTGGCCCAAGTTCGCTCCTTGCACCCACTCTGGGTGGTTTATAACAGTCAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR TCA 90 bp GTGGTGGCGCACGCCTTTAATCCAGCACTCGGGAGGCAGAGGCAGGTGGATTTCGATCTAAAACTTCACTaGAGGGCTGTGAGGGAGGTA +
Preference number: 2 (lower is better)
Translates to: VVAHAFNPALGRQRQVDFDLKLH*RAVREV
Trigger: TACCTCCCTCACAGCCCTTCAGTGAAGTTTTAGATC...GAAATCCACCTGCCTCTGCCTCCCGAGTGCTGGATTAAAGGCGTGCGCCACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR TCA 90 bp ACGCCTTTAATCCAGCACTCGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGAGCATAACTGTCCTCTaGGAGGCTCTACCCAGCAGC +
Preference number: 2 (lower is better)
Translates to: TPLIQHSGGRGRWISEFESITVL*EALPSS
Trigger: GCTGCTGGGTAGAGCCTCTCAGAGGACAGTTATGCT...CTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCGAGTGCTGGATTAAAGGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR GCA 90 bp GTGGTGGCGCACGCCTTTAATCCAGCACTCGGGAGGCAGAGGCAGGTGGATTTCGTTAAGAACACTGACTaGTCTTCCAGAGGTCCTCAG +
Preference number: 2 (lower is better)
Translates to: VVAHAFNPALGRQRQVDFVKNTD*SSRGPQ
Trigger: CTGAGGACCTCTGGAAGAGCAGTCAGTGTTCTTAAC...GAAATCCACCTGCCTCTGCCTCCCGAGTGCTGGATTAAAGGCGTGCGCCACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR GCA 90 bp ACAGGTGGCCAGAGCTACCCAGATGCACAGAAAGGACTGTCCGACAGCTGTACTGGGAGACCCGGAACCTaGAGCATCAGTAAGCAGCTA +
Preference number: 2 (lower is better)
Translates to: TGGQSYPDAQKGLSDSCTGRPGT*SISKQL
Trigger: TAGCTGCTTACTGATGCTGCAGGTTCCGGGTCTCCC...AGTACAGCTGTCGGACAGTCCTTTCTGTGCATCTGGGTAGCTCTGGCCACCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR GCA 90 bp ACGCCTTTAATCCAGCACTCGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGAGCCCGATCCTCGACTaGTGTGACATAGGACTGTTG +
Preference number: 2 (lower is better)
Translates to: TPLIQHSGGRGRWISEFESPILD*CDIGLL
Trigger: CAACAGTCCTATGTCACAGCAGTCGAGGATCGGGCT...CTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCGAGTGCTGGATTAAAGGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR CCA 90 bp GTGGTGGCGCACGCCTTTAATCCAGCACTCGGGAGGCAGAGGCAGGTGGATTTCCACCAAACATCTTTCTaGCATCTCCAGCATCCTAGA +
Preference number: 2 (lower is better)
Translates to: VVAHAFNPALGRQRQVDFHQTSF*HLQHPR
Trigger: TCTAGGATGCTGGAGATGCCAGAAAGATGTTTGGTG...GAAATCCACCTGCCTCTGCCTCCCGAGTGCTGGATTAAAGGCGTGCGCCACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR CAA 90 bp TCTGAAAAACCCAAGCTATTGAAGTCTCAAACACTTGGCACTGAGTaGTTCTGTCAGAAGTGGCCCTGCGGGGCACAGGCAGGGAGACCC +
Preference number: 2 (lower is better)
Translates to: SEKPKLLKSQTLGTE*FCQKWPCGAQAGRP
Trigger: GGGTCTCCCTGCCTGTGCCCCGCAGGGCCACTTCTGACAGAACAACTCAGTGCCAAGTGTTTGAGACTTCAATAGCTTGGGTTTTTCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR TCA 90 bp AGAGCCCCCAGCTCTTCCTATCCTTCACTCATCTCCACGACTCATCCCACGAGTCCACACCAATGCCTTTaGAAGGCTGCTGTTGAAAGC +
Preference number: 2 (lower is better)
Translates to: RAPSSSYPSLISTTHPTSPHQCL*KAAVES
Trigger: GCTTTCAACAGCAGCCTTTCAAAGGCATTGGTGTGG...ACTCGTGGGATGAGTCGTGGAGATGAGTGAAGGATAGGAAGAGCTGGGGGCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR TCA 90 bp AACTGTCCTCTGAGAGGCTCTACCCAGCAGCGGACTGAAACAAATGCAGATACCACCAGGAAAGGAAAGTaGCGGGACAGGCCAACGATC +
Preference number: 2 (lower is better)
Translates to: NCPLRGSTQQRTETNADTTRKGK*RDRPTI
Trigger: GATCGTTGGCCTGTCCCGTCACTTTCCTTTCCTGGT...GGTATCTGCATTTGTTTCAGTCCGCTGCTGGGTAGAGCCTCTCAGAGGACAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR TCA 90 bp GGAAGTCAAACTGATCATCGGTTATCTCAAGAAAATGCTGACTACGACGCCTGTCGAGTGCCCCACAACTaGGGGCTGCTGAGGACTGCC +
Preference number: 2 (lower is better)
Translates to: GSQTDHRLSQENADYDACRVPHN*GLLRTA
Trigger: GGCAGTCCTCAGCAGCCCTCAGTTGTGGGGCACTCG...ACAGGCGTCGTAGTCAGCATTTTCTTGAGATAACCGATGATCAGTTTGACTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000163486.2
3UTR-3UTR CCA 90 bp GAAGAGCTGAGGAAAGGACTGAAGGCCCTGAAGGGGGTAGGAACTCCCCAGCATTTGGCAAGGCAGTTCTaGGGATATCAATGCCAAGCA +
Preference number: 2 (lower is better)
Translates to: EELRKGLKALKGVGTPQHLARQF*GYQCQA
Trigger: TGCTTGGCATTGATATCCCCAGAACTGCCTTGCCAA...ATGCTGGGGAGTTCCTACCCCCTTCAGGGCCTTCAGTCCTTTCCTCAGCTCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR CCA 90 bp CAGGTGGATGTTAGTGAGCACAAGGCCAGCCTGGTCTACATGGAGAGTTCCAGGTTTGTGAGGGAAGACTaGAAGGGGACAGCATTTGGG +
Preference number: 2 (lower is better)
Translates to: QVDVSEHKASLVYMESSRFVRED*KGTAFG
Trigger: CCCAAATGCTGTCCCCTTCCAGTCTTCCCTCACAAA...CCTGGAACTCTCCATGTAGACCAGGCTGGCCTTGTGCTCACTAACATCCACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR TCA 90 bp ACAGGTGGCCAGAGCTACCCAGATGCACAGAAAGGACTGTCCGACAGCTGTACTCAAGTCCTCCTCCCTTaGAGAAAACCTCTCAGAGTA +
Preference number: 2 (lower is better)
Translates to: TGGQSYPDAQKGLSDSCTQVLLP*RKPLRV
Trigger: TACTCTGAGAGGTTTTCTTCAAGGGAGGAGGACTTG...AGTACAGCTGTCGGACAGTCCTTTCTGTGCATCTGGGTAGCTCTGGCCACCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR TCA 90 bp AGCACCAAACATCTTTCTGGCATCTCCAGCATCCTAGAATCACCTGCTCAGGGACCACGGGCCTACATCTaGCCACTCACATCTCAACTG +
Preference number: 2 (lower is better)
Translates to: STKHLSGISSILESPAQGPRAYI*PLTSQL
Trigger: CAGTTGAGATGTGAGTGGTCAGATGTAGGCCCGTGG...TCCCTGAGCAGGTGATTCTAGGATGCTGGAGATGCCAGAAAGATGTTTGGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR TCA 90 bp GAAGAGCTGAGGAAAGGACTGAAGGCCCTGAAGGGGGTAGGAACTCCCCAGCATTTTCTCGAACTTTGGTaGAACCTCTGTGACCCTGTA +
Preference number: 2 (lower is better)
Translates to: EELRKGLKALKGVGTPQHFLELW*NLCDPV
Trigger: TACAGGGTCACAGAGGTTTCACCAAAGTTCGAGAAA...ATGCTGGGGAGTTCCTACCCCCTTCAGGGCCTTCAGTCCTTTCCTCAGCTCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR TCA 90 bp ACGCCTTTAATCCAGCACTCGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGCTTCAAAGGGCCTACTaGCTTAACTTCTGCCAACTC +
Preference number: 2 (lower is better)
Translates to: TPLIQHSGGRGRWISEFELQRAY*LNFCQL
Trigger: GAGTTGGCAGAAGTTAAGTCAGTAGGCCCTTTGAAG...CTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCGAGTGCTGGATTAAAGGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR TCA 90 bp ACAGGTGGCCAGAGCTACCCAGATGCACAGAAAGGACTGTCCGACAGCTGTACTCTTGGTACACAAACCTaGCAACATGACCTTGATCCC +
Preference number: 2 (lower is better)
Translates to: TGGQSYPDAQKGLSDSCTLGTQT*QHDLDP
Trigger: GGGATCAAGGTCATGTTGTCAGGTTTGTGTACCAAG...AGTACAGCTGTCGGACAGTCCTTTCTGTGCATCTGGGTAGCTCTGGCCACCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR GCA 90 bp AGAGCCCCCAGCTCTTCCTATCCTTCACTCATCTCCACGACTCATCCCACGAGTACCTCTCAGAGTAGCTaGTTGCTAAGTCTCCAAGCA +
Preference number: 2 (lower is better)
Translates to: RAPSSSYPSLISTTHPTSTSQSS*LLSLQA
Trigger: TGCTTGGAGACTTAGCAAGCAGCTACTCTGAGAGGT...ACTCGTGGGATGAGTCGTGGAGATGAGTGAAGGATAGGAAGAGCTGGGGGCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR CCA 90 bp AGGGAGGAGAGGTTTGCTGTGGATCATGGTTTCACGGCCCTCAGTCCATCAAAGTTCTGTAGGCCAGCCTaGTCTATAGTGAGTTCCAGG +
Preference number: 2 (lower is better)
Translates to: REERFAVDHGFTALSPSKFCRPA*SIVSSR
Trigger: CCTGGAACTCACTATAGACCAGGCTGGCCTACAGAA...CTTTGATGGACTGAGGGCCGTGAAACCATGATCCACAGCAAACCTCTCCTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR CCA 90 bp AACTGTCCTCTGAGAGGCTCTACCCAGCAGCGGACTGAAACAAATGCAGATACCTCCACACAAGCACTGTaGCACGAGTGTGCCTGCTTT +
Preference number: 2 (lower is better)
Translates to: NCPLRGSTQQRTETNADTSTQAL*HECACF
Trigger: AAAGCAGGCACACTCGTGCCACAGTGCTTGTGTGGA...GGTATCTGCATTTGTTTCAGTCCGCTGCTGGGTAGAGCCTCTCAGAGGACAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR TCA 90 bp AGGGAGGAGAGGTTTGCTGTGGATCATGGTTTCACGGCCCTCAGTCCATCAAAGGAAAACATGAAACCCTaGAGCTCCATGTGCCATCAG +
Preference number: 2 (lower is better)
Translates to: REERFAVDHGFTALSPSKENMKP*SSMCHQ
Trigger: CTGATGGCACATGGAGCTTCAGGGTTTCATGTTTTC...CTTTGATGGACTGAGGGCCGTGAAACCATGATCCACAGCAAACCTCTCCTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR CCA 90 bp AACTGTCCTCTGAGAGGCTCTACCCAGCAGCGGACTGAAACAAATGCAGATACCACACACCCTGGTTTCTaGTCTGGCTTTGCCATTAGC +
Preference number: 2 (lower is better)
Translates to: NCPLRGSTQQRTETNADTTHPGF*SGFAIS
Trigger: GCTAATGGCAAAGCCAGACCAGAAACCAGGGTGTGT...GGTATCTGCATTTGTTTCAGTCCGCTGCTGGGTAGAGCCTCTCAGAGGACAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR CCA 90 bp AGAGCCCCCAGCTCTTCCTATCCTTCACTCATCTCCACGACTCATCCCACGAGTCAGAGGAAAAGGGGATaGGATATAGGGAGAGACTTT +
Preference number: 2 (lower is better)
Translates to: RAPSSSYPSLISTTHPTSQRKRG*DIGRDF
Trigger: AAAGTCTCTCCCTATATCCCATCCCCTTTTCCTCTG...ACTCGTGGGATGAGTCGTGGAGATGAGTGAAGGATAGGAAGAGCTGGGGGCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR TCA 90 bp CAGGTGGATGTTAGTGAGCACAAGGCCAGCCTGGTCTACATGGAGAGTTCCAGGTTGAAAGGCTGCTGTTaGAAGCAGTTTCCAGTGTAT +
Preference number: 2 (lower is better)
Translates to: QVDVSEHKASLVYMESSRLKGCC*KQFPVY
Trigger: ATACACTGGAAACTGCTTTCAACAGCAGCCTTTCAA...CCTGGAACTCTCCATGTAGACCAGGCTGGCCTTGTGCTCACTAACATCCACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR CCA 90 bp AGGGAGGAGAGGTTTGCTGTGGATCATGGTTTCACGGCCCTCAGTCCATCAAAGTATCCCTGGCTGGACTaGAATTCCATCTATAGAGCA +
Preference number: 2 (lower is better)
Translates to: REERFAVDHGFTALSPSKYPWLD*NSIYRA
Trigger: TGCTCTATAGATGGAATTCCAGTCCAGCCAGGGATA...CTTTGATGGACTGAGGGCCGTGAAACCATGATCCACAGCAAACCTCTCCTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR CCA 90 bp CAGGTGGATGTTAGTGAGCACAAGGCCAGCCTGGTCTACATGGAGAGTTCCAGGCTGTCTCTAACACTCTaGACGTTTGTTTCTAACCAC +
Preference number: 2 (lower is better)
Translates to: QVDVSEHKASLVYMESSRLSLTL*TFVSNH
Trigger: GTGGTTAGAAACAAACGTCCAGAGTGTTAGAGACAG...CCTGGAACTCTCCATGTAGACCAGGCTGGCCTTGTGCTCACTAACATCCACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR TCA 90 bp GAAGAGCTGAGGAAAGGACTGAAGGCCCTGAAGGGGGTAGGAACTCCCCAGCATAGTGAAAAAGAAACCTaGTGTGAATTCAGCTTTGAG +
Preference number: 2 (lower is better)
Translates to: EELRKGLKALKGVGTPQHSEKET*CEFSFE
Trigger: CTCAAAGCTGAATTCACATCAGGTTTCTTTTTCACT...ATGCTGGGGAGTTCCTACCCCCTTCAGGGCCTTCAGTCCTTTCCTCAGCTCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR TCA 90 bp ACGCCTTTAATCCAGCACTCGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGACACACACACAGATCTaGGGTAGAAATTATAACTCC +
Preference number: 2 (lower is better)
Translates to: TPLIQHSGGRGRWISEFETHTQI*GRNYNS
Trigger: GGAGTTATAATTTCTACCTCAGATCTGTGTGTGTGT...CTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCGAGTGCTGGATTAAAGGCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR TCA 90 bp CAGGTGGATGTTAGTGAGCACAAGGCCAGCCTGGTCTACATGGAGAGTTCCAGGCTTTGGCTATGGATTTaGAAGACAGCAAGAAGAGTT +
Preference number: 2 (lower is better)
Translates to: QVDVSEHKASLVYMESSRLWLWI*KTARRV
Trigger: AACTCTTCTTGCTGTCTTTCAAATCCATAGCCAAAG...CCTGGAACTCTCCATGTAGACCAGGCTGGCCTTGTGCTCACTAACATCCACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR GCA 90 bp GAAGAGCTGAGGAAAGGACTGAAGGCCCTGAAGGGGGTAGGAACTCCCCAGCATACGTGTATAGTTTTGTaGATGAGTACAAGTGCTTAC +
Preference number: 2 (lower is better)
Translates to: EELRKGLKALKGVGTPQHTCIVL*MSTSAY
Trigger: GTAAGCACTTGTACTCATGCACAAAACTATACACGT...ATGCTGGGGAGTTCCTACCCCCTTCAGGGCCTTCAGTCCTTTCCTCAGCTCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR GCA 90 bp ACAGGTGGCCAGAGCTACCCAGATGCACAGAAAGGACTGTCCGACAGCTGTACTCTTTTCTTCTTGGGTTaGCACAGGTTGTACAATCAA +
Preference number: 2 (lower is better)
Translates to: TGGQSYPDAQKGLSDSCTLFFLG*HRLYNQ
Trigger: TTGATTGTACAACCTGTGGCAACCCAAGAAGAAAAG...AGTACAGCTGTCGGACAGTCCTTTCTGTGCATCTGGGTAGCTCTGGCCACCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR CCA 90 bp ATATTCTATAAGAAACAAGTTAGTAGTCGGGTGTGGTGGCGCACGCCTTTAATCCCCTGGAACCCACGGTaGGAGGAGAGAAACAGTACC +
Preference number: 2 (lower is better)
Translates to: IFYKKQVSSRVWWRTPLIPWNPR*EERNST
Trigger: GGTACTGTTTCTCTCCTCCCACCGTGGGTTCCAGGG...GATTAAAGGCGTGCGCCACCACACCCGACTACTAACTTGTTTCTTATAGAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR CCA 90 bp AGAGCCCCCAGCTCTTCCTATCCTTCACTCATCTCCACGACTCATCCCACGAGTGCAAGAAGAGTTATATaGGAGGGTTTGGAAGAAAGA +
Preference number: 2 (lower is better)
Translates to: RAPSSSYPSLISTTHPTSARRVI*EGLEER
Trigger: TCTTTCTTCCAAACCCTCCCATATAACTCTTCTTGC...ACTCGTGGGATGAGTCGTGGAGATGAGTGAAGGATAGGAAGAGCTGGGGGCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR CAA 90 bp CTTTCAACTATCACTTTACCAAAAATCCTAGATCACACAGGTGCCTaGGACCAGAGCCCCCAGCTCTTCCTATCCTTCACTCATCTCCAC +
Preference number: 2 (lower is better)
Translates to: LSTITLPKILDHTGA*DQSPQLFLSFTHLH
Trigger: GTGGAGATGAGTGAAGGATAGGAAGAGCTGGGGGCTCTGGTCCAAGGCACCTGTGTGATCTAGGATTTTTGGTAAAGTGATAGTTGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR TCA 90 bp AGAGCCCCCAGCTCTTCCTATCCTTCACTCATCTCCACGACTCATCCCACGAGTAATGGAGTGATTCCATaGTGTAGATATGGCAAAAAG +
Preference number: 2 (lower is better)
Translates to: RAPSSSYPSLISTTHPTSNGVIP*CRYGKK
Trigger: CTTTTTGCCATATCTACATCATGGAATCACTCCATT...ACTCGTGGGATGAGTCGTGGAGATGAGTGAAGGATAGGAAGAGCTGGGGGCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR GCA 90 bp AGGGAGGAGAGGTTTGCTGTGGATCATGGTTTCACGGCCCTCAGTCCATCAAAGATCAGGAGGGAGATCTaGGATTTAAAACTACCAGAA +
Preference number: 2 (lower is better)
Translates to: REERFAVDHGFTALSPSKIRREI*DLKLPE
Trigger: TTCTGGTAGTTTTAAATCGCAGATCTCCCTCCTGAT...CTTTGATGGACTGAGGGCCGTGAAACCATGATCCACAGCAAACCTCTCCTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR GCA 90 bp ATATTCTATAAGAAACAAGTTAGTAGTCGGGTGTGGTGGCGCACGCCTTTAATCTGCAGAGCCTTGATGTaGCAGGGTTGGAGGGATACC +
Preference number: 2 (lower is better)
Translates to: IFYKKQVSSRVWWRTPLICRALM*QGWRDT
Trigger: GGTATCCCTCCAACCCTGGCACATCAAGGCTCTGCA...GATTAAAGGCGTGCGCCACCACACCCGACTACTAACTTGTTTCTTATAGAATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR CCA 90 bp AGGGAGGAGAGGTTTGCTGTGGATCATGGTTTCACGGCCCTCAGTCCATCAAAGGCACCAAAGCATATCTaGAAGTTGGTTATTGACAGT +
Preference number: 2 (lower is better)
Translates to: REERFAVDHGFTALSPSKAPKHI*KLVIDS
Trigger: ACTGTCAATAACCAACTTCCAGATATGCTTTGGTGC...CTTTGATGGACTGAGGGCCGTGAAACCATGATCCACAGCAAACCTCTCCTCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR CCA 90 bp AGGGAGGAGAGGTTTGCTGTGGATCATGGTTTCACGGCCCTCAGTCCATCAAAGAACTCTTTAAGATGCTaGCAAAACACTCCTCCTTCA +
Preference number: 2 (lower is better)
Translates to: REERFAVDHGFTALSPSKNSLRC*QNTPPS
Trigger: TGAAGGAGGAGTGTTTTGCCAGCATCTTAAAGAGTT...CTTTGATGGACTGAGGGCCGTGAAACCATGATCCACAGCAAACCTCTCCTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR CCA 90 bp ACAGGTGGCCAGAGCTACCCAGATGCACAGAAAGGACTGTCCGACAGCTGTACTTTATATGGGAGGGTTTaGAAGAAAGAAATGGAAGAG +
Preference number: 2 (lower is better)
Translates to: TGGQSYPDAQKGLSDSCTLYGRV*KKEMEE
Trigger: CTCTTCCATTTCTTTCTTCCAAACCCTCCCATATAA...AGTACAGCTGTCGGACAGTCCTTTCTGTGCATCTGGGTAGCTCTGGCCACCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR CAA 90 bp GCATCAACTAACCTGTTGGTCTTCCCTGTCAGTCATCTTAACCTGTaGGTAAATACTGAGAGCTCTCAGAGACTGACCCACCAACCAAAG +
Preference number: 2 (lower is better)
Translates to: ASTNLLVFPVSHLNL*VNTESSQRLTHQPK
Trigger: CTTTGGTTGGTGGGTCAGTCTCTGAGAGCTCTCAGTATTTACCAACAGGTTAAGATGACTGACAGGGAAGACCAACAGGTTAGTTGATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR CAA 90 bp GGGTGCAAGCTAGAAAGGAGACAACTTCTAGGACACACAGCTATCTaGCAAGGTTTGAAAAAGGTGTCCCTTTTGGTGGAGGAACTGCAA +
Preference number: 2 (lower is better)
Translates to: GCKLERRQLLGHTAI*QGLKKVSLLVEELQ
Trigger: TTGCAGTTCCTCCACCAAAAGGGACACCTTTTTCAAACCTTGCAAGATAGCTGTGTGTCCTAGAAGTTGTCTCCTTTCTAGCTTGCACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR TCA 90 bp AGCACCAAACATCTTTCTGGCATCTCCAGCATCCTAGAATCACCTGCTCAGGGATTGGTGAAACCTCTGTaGCCCTGTAACTCTTTAAGA +
Preference number: 2 (lower is better)
Translates to: STKHLSGISSILESPAQGLVKPL*PCNSLR
Trigger: TCTTAAAGAGTTACAGGGTCACAGAGGTTTCACCAA...TCCCTGAGCAGGTGATTCTAGGATGCTGGAGATGCCAGAAAGATGTTTGGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR GCA 90 bp AGAGCCCCCAGCTCTTCCTATCCTTCACTCATCTCCACGACTCATCCCACGAGTAAGCCAGAAAACAAGTaGACATATACAGAAATCTTC +
Preference number: 2 (lower is better)
Translates to: RAPSSSYPSLISTTHPTSKPENK*TYTEIF
Trigger: GAAGATTTCTGTATATGTGCACTTGTTTTCTGGCTT...ACTCGTGGGATGAGTCGTGGAGATGAGTGAAGGATAGGAAGAGCTGGGGGCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR GCA 90 bp ACAGGTGGCCAGAGCTACCCAGATGCACAGAAAGGACTGTCCGACAGCTGTACTACAAAGATCTCACTGTaGTACACTGACTTACTTTAT +
Preference number: 2 (lower is better)
Translates to: TGGQSYPDAQKGLSDSCTTKISL*YTDLLY
Trigger: ATAAAGTAAGTCAGTGTAGCACAGTGAGATCTTTGT...AGTACAGCTGTCGGACAGTCCTTTCTGTGCATCTGGGTAGCTCTGGCCACCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR CCA 90 bp AGGGAGGAGAGGTTTGCTGTGGATCATGGTTTCACGGCCCTCAGTCCATCAAAGCTATTAATTCATTCCTaGTCAACATTCCTAGTCCGA +
Preference number: 2 (lower is better)
Translates to: REERFAVDHGFTALSPSKLLIHS*STFLVR
Trigger: TCGGACTAGGAATGTTGACCAGGAATGAATTAATAG...CTTTGATGGACTGAGGGCCGTGAAACCATGATCCACAGCAAACCTCTCCTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR CCA 90 bp ATTTACTCATTCAACAAGCATTTTCACACTACATATAGGGACGTACCAGGAGTGCATGACCTTGATCCCTaGAACCCACGGTGGGAGGAG +
Preference number: 2 (lower is better)
Translates to: IYSFNKHFHTTYRDVPGVHDLDP*NPRWEE
Trigger: CTCCTCCCACCGTGGGTTCCAGGGATCAAGGTCATG...CACTCCTGGTACGTCCCTATATGTAGTGTGAAAATGCTTGTTGAATGAGTAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR CAA 90 bp CTAGAAAGGAGACAACTTCTAGGACACACAGCTATCTTGCAAGGTTaGAAAAAGGTGTCCCTTTTGGTGGAGGAACTGCAAATGATGCCC +
Preference number: 2 (lower is better)
Translates to: LERRQLLGHTAILQG*KKVSLLVEELQMMP
Trigger: GGGCATCATTTGCAGTTCCTCCACCAAAAGGGACACCTTTTTCAAACCTTGCAAGATAGCTGTGTGTCCTAGAAGTTGTCTCCTTTCTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR GCA 90 bp AACTTGATGGCTTCTTCTAATGGATTGTCAACCCTTTCTAGTTTTTCAGGAATAAAGAGTGGTGCCGAGTaGCCCACAACTGAGGGCTGC +
Preference number: 2 (lower is better)
Translates to: NLMASSNGLSTLSSFSGIKSGAE*PTTEGC
Trigger: GCAGCCCTCAGTTGTGGGGCACTCGGCACCACTCTT...TATTCCTGAAAAACTAGAAAGGGTTGACAATCCATTAGAAGAAGCCATCAAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000163486.2
3UTR-3UTR GCA 90 bp AGCACCAAACATCTTTCTGGCATCTCCAGCATCCTAGAATCACCTGCTCAGGGAAGAGATCTTCTGAAGTaGTGGGATAAAAGAAGTGTA +
Preference number: 2 (lower is better)
Translates to: STKHLSGISSILESPAQGRDLLK*WDKRSV
Trigger: TACACTTCTTTTATCCCAGCACTTCAGAAGATCTCT...TCCCTGAGCAGGTGATTCTAGGATGCTGGAGATGCCAGAAAGATGTTTGGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR GCA 90 bp CATAGCACGCAATCCACAGCTCTCATTTCATACTGCAAATTCCATAATTTAGGATTCTGGGGATATCAATaGCAAGCAACTCCCCTCCCC +
Preference number: 2 (lower is better)
Translates to: HSTQSTALISYCKFHNLGFWGYQ*QATPLP
Trigger: GGGGAGGGGAGTTGCTTGGCATTGATATCCCCAGAA...TCCTAAATTATGGAATTTGCAGTATGAAATGAGAGCTGTGGATTGCGTGCTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR CCA 90 bp AACTGTCCTCTGAGAGGCTCTACCCAGCAGCGGACTGAAACAAATGCAGATACCAGCATATCTGGAAGTTaGTTATTGACAGTCACATTT +
Preference number: 2 (lower is better)
Translates to: NCPLRGSTQQRTETNADTSISGS*LLTVTF
Trigger: AAATGTGACTGTCAATAACCAACTTCCAGATATGCT...GGTATCTGCATTTGTTTCAGTCCGCTGCTGGGTAGAGCCTCTCAGAGGACAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR CAA 90 bp CTCCCTGGCCCCCGAGTCTCTCTGCTTCTTTGTCTCGGTCCTTGTTaGTCTCTCACACACATAAATAAAAATCGTAAGGTATTAGTATTT +
Preference number: 2 (lower is better)
Translates to: LPGPRVSLLLCLGPC*SLTHINKNRKVLVF
Trigger: AAATACTAATACCTTACGATTTTTATTTATGTGTGTGAGAGACAAACAAGGACCGAGACAAAGAAGCAGAGAGACTCGGGGGCCAGGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR CCA 90 bp CACAGCAAGGGAACAGTGAGTCAAAGCAAGATGAACACTCGCAGAGAAAACATGGAATCCTATTTACTGTaGCACCAAAGCATATCTGGA +
Preference number: 2 (lower is better)
Translates to: HSKGTVSQSKMNTRRENMESYLL*HQSISG
Trigger: TCCAGATATGCTTTGGTGCCACAGTAAATAGGATTC...CATGTTTTCTCTGCGAGTGTTCATCTTGCTTTGACTCACTGTTCCCTTGCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR CAA 90 bp GTATCAATGCTCTCAGCAGCAAGGGTTTTCAGAGGAGTGAGGAACTaGATGGCTTCTTCTAATGGATTGTCAACCCTTTCTAGTTTTTCA +
Preference number: 2 (lower is better)
Translates to: VSMLSAARVFRGVRN*MASSNGLSTLSSFS
Trigger: TGAAAAACTAGAAAGGGTTGACAATCCATTAGAAGAAGCCATCAAGTTCCTCACTCCTCTGAAAACCCTTGCTGCTGAGAGCATTGATAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000163486.2
3UTR CAA 90 bp ATCAGGGACCTGGTCTTTGTTAGGGGAAAAATACACAAATGTTTGTaGACAGAGTGTTCTGGGTTGAGTGTTAAGAAACAAACCAATCCG +
Preference number: 2 (lower is better)
Translates to: IRDLVFVRGKIHKCL*TECSGLSVKKQTNP
Trigger: CGGATTGGTTTGTTTCTTAACACTCAACCCAGAACACTCTGTCAACAAACATTTGTGTATTTTTCCCCTAACAAAGACCAGGTCCCTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR GCA 90 bp ATTTACTCATTCAACAAGCATTTTCACACTACATATAGGGACGTACCAGGAGTGAGAAGTGTACCACCATaGCTGGCCCCATTTTATACT +
Preference number: 2 (lower is better)
Translates to: IYSFNKHFHTTYRDVPGVRSVPP*LAPFYT
Trigger: AGTATAAAATGGGGCCAGGCATGGTGGTACACTTCT...CACTCCTGGTACGTCCCTATATGTAGTGTGAAAATGCTTGTTGAATGAGTAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR GCA 90 bp GCAAGGGTTTTCAGAGGAGTGAGGAACTTGATGGCTTCTTCTAATGGATTGTCACTATGTCTTGTTGTTTaGTGTCATTGGTTAAAGGGT +
Preference number: 2 (lower is better)
Translates to: ARVFRGVRNLMASSNGLSLCLVV*CHWLKG
Trigger: ACCCTTTAACCAATGACAGCAAACAACAAGACATAG...TGACAATCCATTAGAAGAAGCCATCAAGTTCCTCACTCCTCTGAAAACCCTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163486.2
3UTR-3UTR TCA 90 bp ATATTCTATAAGAAACAAGTTAGTAGTCGGGTGTGGTGGCGCACGCCTTTAATCCAACTGCACATACACTaGATTCTCAGAAACACTAAA +
Preference number: 2 (lower is better)
Translates to: IFYKKQVSSRVWWRTPLIQLHIH*ILRNTK
Trigger: TTTAGTGTTTCTGAGAATTCAGTGTATGTGCAGTTG...GATTAAAGGCGTGCGCCACCACACCCGACTACTAACTTGTTTCTTATAGAATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR CAA 90 bp AGTATCAGGGACCTGGTCTTTGTTAGGGGAAAAATACACAAATGTTaGTTGACAGAGTGTTCTGGGTTGAGTGTTAAGAAACAAACCAAT +
Preference number: 2 (lower is better)
Translates to: SIRDLVFVRGKIHKC*LTECSGLSVKKQTN
Trigger: ATTGGTTTGTTTCTTAACACTCAACCCAGAACACTCTGTCAACAAACATTTGTGTATTTTTCCCCTAACAAAGACCAGGTCCCTGATACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR TCA 90 bp ATTTACTCATTCAACAAGCATTTTCACACTACATATAGGGACGTACCAGGAGTGCATAGTGTCATGATCTaGGTTTTGAAGAGCTATGTG +
Preference number: 2 (lower is better)
Translates to: IYSFNKHFHTTYRDVPGVHSVMI*VLKSYV
Trigger: CACATAGCTCTTCAAAACTCAGATCATGACACTATG...CACTCCTGGTACGTCCCTATATGTAGTGTGAAAATGCTTGTTGAATGAGTAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR CCA 90 bp CATAGCACGCAATCCACAGCTCTCATTTCATACTGCAAATTCCATAATTTAGGAGATCTTCTGAAGTGCTaGGATAAAAGAAGTGTACCA +
Preference number: 2 (lower is better)
Translates to: HSTQSTALISYCKFHNLGDLLKC*DKRSVP
Trigger: TGGTACACTTCTTTTATCCCAGCACTTCAGAAGATC...TCCTAAATTATGGAATTTGCAGTATGAAATGAGAGCTGTGGATTGCGTGCTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR GCA 90 bp TCCCAATTTCAACAGCATTTCCCCCTTAATTTCTTCCACCAAAAGTTTATCACATTGGGAGGAACTTGCTaGGTTTGTCTAAATTCTTCT +
Preference number: 2 (lower is better)
Translates to: SQFQQHFPLNFFHQKFITLGGTC*VCLNSS
Trigger: AGAAGAATTTAGACAAACGCAGCAAGTTCCTCCCAA...TGTGATAAACTTTTGGTGGAAGAAATTAAGGGGGAAATGCTGTTGAAATTGGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000169500.2
3UTR-3UTR CCA 90 bp TCCCAATTTCAACAGCATTTCCCCCTTAATTTCTTCCACCAAAAGTTTATCACACATAAGCTATTTTGTTaGGAGGAACTTGCTGCGTTT +
Preference number: 2 (lower is better)
Translates to: SQFQQHFPLNFFHQKFITHKLFC*EELAAF
Trigger: AAACGCAGCAAGTTCCTCCCAACAAAATAGCTTATG...TGTGATAAACTTTTGGTGGAAGAAATTAAGGGGGAAATGCTGTTGAAATTGGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000169500.2
3UTR-3UTR TCA 90 bp TCCCAATTTCAACAGCATTTCCCCCTTAATTTCTTCCACCAAAAGTTTATCACATGTTCCAAAGATTCCTaGAATAAATTTGCCTCTCTC +
Preference number: 2 (lower is better)
Translates to: SQFQQHFPLNFFHQKFITCSKDS*NKFASL
Trigger: GAGAGAGGCAAATTTATTTCAGGAATCTTTGGAACA...TGTGATAAACTTTTGGTGGAAGAAATTAAGGGGGAAATGCTGTTGAAATTGGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000169500.2
3UTR-3UTR TCA 90 bp AACTTGATGGCTTCTTCTAATGGATTGTCAACCCTTTCTAGTTTTTCAGGAATAGTATGGAAGTCAAACTaGTCATCGGTTATCTCAAGA +
Preference number: 2 (lower is better)
Translates to: NLMASSNGLSTLSSFSGIVWKSN*SSVISR
Trigger: TCTTGAGATAACCGATGATCAGTTTGACTTCCATAC...TATTCCTGAAAAACTAGAAAGGGTTGACAATCCATTAGAAGAAGCCATCAAGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000163486.2
3UTR-3UTR GCA 90 bp AGGAATAAGTTCTTCCTTATGACCACTGGTAACTTCTTCTTCTTCTTCTCTTTTGGGTCATCTTTCTCATaGAGTATGTATGGAAGTCAA +
Preference number: 2 (lower is better)
Translates to: RNKFFLMTTGNFFFFFSFGSSFS*SMYGSQ
Trigger: TTGACTTCCATACATACTGCATGAGAAAGATGACCC...AAAAGAGAAGAAGAAGAAGAAGTTACCAGTGGTCATAAGGAAGAACTTATTCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163486.2
3UTR GCA 72 bp TGGCCCTGCGGGGCACAGGCAGGGAGACCCGGAACCTaGAGCATCAGTAAGCAGCTAACCCTCCTGCAATTG +
Preference number: 3 (lower is better)
Translates to: WPCGAQAGRPGT*SISKQLTLLQL
Trigger: CAATTGCAGGAGGGTTAGCTGCTTACTGATGCTGCAGGTTCCGGGTCTCCCTGCCTGTGCCCCGCAGGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR CCA 72 bp AGCATCAGTAAGCAGCTAACCCTCCTGCAATTGCTCTaGCTACCCATGCGGGTCTGGGCCAGAGCGGTAGCA +
Preference number: 3 (lower is better)
Translates to: SISKQLTLLQLL*LPMRVWARAVA
Trigger: TGCTACCGCTCTGGCCCAGACCCGCATGGGTAGCCAGAGCAATTGCAGGAGGGTTAGCTGCTTACTGATGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR GCA 72 bp AGCGGTAGCACCAGGAAGGAAGCATGCAGGCAGGAATaGCACACACCCTGGTTTCTGGTCTGGCTTTGCCAT +
Preference number: 3 (lower is better)
Translates to: SGSTRKEACRQE*HTPWFLVWLCH
Trigger: ATGGCAAAGCCAGACCAGAAACCAGGGTGTGTGGCATTCCTGCCTGCATGCTTCCTTCCTGGTGCTACCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR CCA 72 bp GTACCCAAAAGTCCTCTGACTTCCACACAAGCACTGTaGCACGAGTGTGCCTGCTTTCTCCTCCCTCCCTCC +
Preference number: 3 (lower is better)
Translates to: VPKSPLTSTQAL*HECACFLLPPS
Trigger: GGAGGGAGGGAGGAGAAAGCAGGCACACTCGTGCCACAGTGCTTGTGTGGAAGTCAGAGGACTTTTGGGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR CCA 72 bp GGGTTTTCTGGGACCTGTTCTCAGGGGCTTTCTTGTTaGACAGACAGGACCTGGACCTCACACCAGGTCAGC +
Preference number: 3 (lower is better)
Translates to: GFSGTCSQGLSC*TDRTWTSHQVS
Trigger: GCTGACCTGGTGTGAGGTCCAGGTCCTGTCTGTCCAACAAGAAAGCCCCTGAGAACAGGTCCCAGAAAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR CAA 90 bp ACAGGTGGCCAGAGCTACCCAGATGCACAGAAAGGACTGTCCGACAGCTGTACTACAGCACAAGCTACCTaGGGGGTAGCTTCACAGAGC +
Preference number: 3 (lower is better)
Translates to: TGGQSYPDAQKGLSDSCTTAQAT*GVASQS
Trigger: GCTCTGTGAAGCTACCCCCAAGGTAGCTTGTGCTGT...AGTACAGCTGTCGGACAGTCCTTTCTGTGCATCTGGGTAGCTCTGGCCACCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR TCA 72 bp AATCCAGCACTCGGGAGGCAGAGGCAGGTGGATTTCTaGGTTCGAGGGCAGCCTGGTCTACAAAGTGAGTTC +
Preference number: 3 (lower is better)
Translates to: NPALGRQRQVDF*VRGQPGLQSEF
Trigger: GAACTCACTTTGTAGACCAGGCTGCCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCGAGTGCTGGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR TCA 72 bp GCCTCCTGGGTGAAACTGCTCTGGGGTGCTGCTTGCTaGCTTCCTCATAAAGCTGAAGCCTCTCGTCTAGAG +
Preference number: 3 (lower is better)
Translates to: ASWVKLLWGAAC*LPHKAEASRLE
Trigger: CTCTAGACGAGAGGCTTCAGCTTTATGAGGAAGTCAGCAAGCAGCACCCCAGAGCAGTTTCACCCAGGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169500.2
3UTR GCA 72 bp CTCCAGCATCCTAGAATCACCTGCTCAGGGATTCCCTaGAGGGAACTTAGCCCTGGCTCTTCTGCTTTCTCG +
Preference number: 3 (lower is better)
Translates to: LQHPRITCSGIP*RELSPGSSAFS
Trigger: CGAGAAAGCAGAAGAGCCAGGGCTAAGTTCCCTGCAGGGAATCCCTGAGCAGGTGATTCTAGGATGCTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR CCA 72 bp GGCTGTGAGCCACTGACTGTTATAAACCACCCAGAGTaGGTGCAAGGAGCGAACTTGGGCCAGTGTGTACTC +
Preference number: 3 (lower is better)
Translates to: GCEPLTVINHPE*VQGANLGQCVL
Trigger: GAGTACACACTGGCCCAAGTTCGCTCCTTGCACCCACTCTGGGTGGTTTATAACAGTCAGTGGCTCACAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR TCA 72 bp ACAGGGGCCAGAAGAGGATGTGAGATCCTCAGGCTGTaGGCCACTGACTGTTATAAACCACCCAGAGTGGGT +
Preference number: 3 (lower is better)
Translates to: TGARRGCEILRL*ATDCYKPPRVG
Trigger: ACCCACTCTGGGTGGTTTATAACAGTCAGTGGCTCACAGCCTGAGGATCTCACATCCTCTTCTGGCCCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR TCA 72 bp ACGGTGGGAGGAGAGAAACAGTACCCAAAAGTCCTCTaGCTTCCACACAAGCACTGTGGCACGAGTGTGCCT +
Preference number: 3 (lower is better)
Translates to: TVGGEKQYPKVL*LPHKHCGTSVP
Trigger: AGGCACACTCGTGCCACAGTGCTTGTGTGGAAGTCAGAGGACTTTTGGGTACTGTTTCTCTCCTCCCACCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR TCA 72 bp TTACTGGGGATGACAGGCAAGAACGCAGTTCAAAGCTaGAAGGGATGGGTCTGGGTCAGACCCGGAGTTGAG +
Preference number: 3 (lower is better)
Translates to: LLGMTGKNAVQS*KGWVWVRPGVE
Trigger: CTCAACTCCGGGTCTGACCCAGACCCATCCCTTTCAGCTTTGAACTGCGTTCTTGCCTGTCATCCCCAGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR GCA 72 bp ACATCTTTCTGGCATCTCCAGCATCCTAGAATCACCTaGTCAGGGATTCCCTGCAGGGAACTTAGCCCTGGC +
Preference number: 3 (lower is better)
Translates to: TSFWHLQHPRIT*SGIPCRELSPG
Trigger: GCCAGGGCTAAGTTCCCTGCAGGGAATCCCTGAGCAGGTGATTCTAGGATGCTGGAGATGCCAGAAAGATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR GCA 72 bp GGGGCTGGAGATGGCTCAGCGGTTAAGAACACTGACTaGTCTTCCAGAGGTCCTCAGTTCAAATCCCAGCAA +
Preference number: 3 (lower is better)
Translates to: GAGDGSAVKNTD*SSRGPQFKSQQ
Trigger: TTGCTGGGATTTGAACTGAGGACCTCTGGAAGAGCAGTCAGTGTTCTTAACCGCTGAGCCATCTCCAGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR CCA 72 bp GGTTTCACGGCCCTCAGTCCATCAAAGCAGAGAATATaGGTGGAGGAGCTCATGATGACAGACAGGCAGCAG +
Preference number: 3 (lower is better)
Translates to: GFTALSPSKQRI*VEELMMTDRQQ
Trigger: CTGCTGCCTGTCTGTCATCATGAGCTCCTCCACCCATATTCTCTGCTTTGATGGACTGAGGGCCGTGAAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR CAA 90 bp ACGCCTTTAATCCAGCACTCGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGCCAAGTCCTCCTCCCTaGAAGAAAACCTCTCAGAGT +
Preference number: 3 (lower is better)
Translates to: TPLIQHSGGRGRWISEFEPSPPP*KKTSQS
Trigger: ACTCTGAGAGGTTTTCTTCAAGGGAGGAGGACTTGG...CTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCGAGTGCTGGATTAAAGGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR CAA 90 bp GTGGTGGCGCACGCCTTTAATCCAGCACTCGGGAGGCAGAGGCAGGTGGATTTCCCTTTGGCTATGGATTaGAAAGACAGCAAGAAGAGT +
Preference number: 3 (lower is better)
Translates to: VVAHAFNPALGRQRQVDFPLAMD*KDSKKS
Trigger: ACTCTTCTTGCTGTCTTTCAAATCCATAGCCAAAGG...GAAATCCACCTGCCTCTGCCTCCCGAGTGCTGGATTAAAGGCGTGCGCCACCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR TCA 72 bp AGGCAGCAGAGGGGGTATTGTCTTCAAAGGGCCTACTaGCTTAACTTCTGCCAACTCCTAAAGGCTCCTCGG +
Preference number: 3 (lower is better)
Translates to: RQQRGYCLQRAY*LNFCQLLKAPR
Trigger: CCGAGGAGCCTTTAGGAGTTGGCAGAAGTTAAGTCAGTAGGCCCTTTGAAGACAATACCCCCTCTGCTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR GCA 72 bp TCAGTGGTCATCCACAGGTGGCCAGAGCTACCCAGATaGACAGAAAGGACTGTCCGACAGCTGTACTTTTGT +
Preference number: 3 (lower is better)
Translates to: SVVIHRWPELPR*TERTVRQLYFC
Trigger: ACAAAAGTACAGCTGTCGGACAGTCCTTTCTGTGCATCTGGGTAGCTCTGGCCACCTGTGGATGACCACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR CCA 72 bp TCTAACTGTGGAATCTGTTCCCCAACAGGGCTGCCCTaGCTAGCCTCAGTGGCTAAGCCTAATTTTGCAGAG +
Preference number: 3 (lower is better)
Translates to: SNCGICSPTGLP*LASVAKPNFAE
Trigger: CTCTGCAAAATTAGGCTTAGCCACTGAGGCTAGCCAGGGCAGCCCTGTTGGGGAACAGATTCCACAGTTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR CCA 72 bp TCAGGCTTGGTGGTGCAGGTCTTTCATGTCAACACTTaGAGGCAGAGGCAGGTGGATGTTAGTGAGCACAAG +
Preference number: 3 (lower is better)
Translates to: SGLVVQVFHVNT*RQRQVDVSEHK
Trigger: CTTGTGCTCACTAACATCCACCTGCCTCTGCCTCCAAGTGTTGACATGAAAGACCTGCACCACCAAGCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR CCA 72 bp GTTCATCTCTACAGAGGGCAGCCACCAGCAACCTACTaGATCAGGAACCCACGCACCATCAAAGAGGAAAAG +
Preference number: 3 (lower is better)
Translates to: VHLYRGQPPATY*IRNPRTIKEEK
Trigger: CTTTTCCTCTTTGATGGTGCGTGGGTTCCTGATCCAGTAGGTTGCTGGTGGCTGCCCTCTGTAGAGATGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR CAA 90 bp ACGCCTTTAATCCAGCACTCGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGTCGGAACTTTTCTTCTaGGGTTGCCACAGGTTGTAC +
Preference number: 3 (lower is better)
Translates to: TPLIQHSGGRGRWISEFESELFF*GCHRLY
Trigger: GTACAACCTGTGGCAACCCAAGAAGAAAAGTTCCGA...CTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCGAGTGCTGGATTAAAGGCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR CAA 90 bp AACTGTCCTCTGAGAGGCTCTACCCAGCAGCGGACTGAAACAAATGCAGATACCTCTCAGAGTAGCTGCTaGCTAAGTCTCCAAGCAGCT +
Preference number: 3 (lower is better)
Translates to: NCPLRGSTQQRTETNADTSQSSC*LSLQAA
Trigger: AGCTGCTTGGAGACTTAGCAAGCAGCTACTCTGAGA...GGTATCTGCATTTGTTTCAGTCCGCTGCTGGGTAGAGCCTCTCAGAGGACAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR CAA 90 bp ACAGGTGGCCAGAGCTACCCAGATGCACAGAAAGGACTGTCCGACAGCTGTACTTTGCCATTAGCAGGCTaGGGTGAAATCCCAATTTCA +
Preference number: 3 (lower is better)
Translates to: TGGQSYPDAQKGLSDSCTLPLAG*GEIPIS
Trigger: TGAAATTGGGATTTCACCCAAGCCTGCTAATGGCAA...AGTACAGCTGTCGGACAGTCCTTTCTGTGCATCTGGGTAGCTCTGGCCACCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR CAA 90 bp ACGCCTTTAATCCAGCACTCGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGGATTTTCTCTGTCTTaGACTTCCTATGGTGGGGAT +
Preference number: 3 (lower is better)
Translates to: TPLIQHSGGRGRWISEFEGFSLS*TSYGGD
Trigger: ATCCCCACCATAGGAAGTCAAAGACAGAGAAAATCC...CTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCGAGTGCTGGATTAAAGGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR TCA 72 bp TACGCTTGCAGACAGGAGCTTAGCATAACTGTCCTCTaGGAGGCTCTACCCAGCAGCGGACTGAAACAAATG +
Preference number: 3 (lower is better)
Translates to: YACRQELSITVL*EALPSSGLKQM
Trigger: CATTTGTTTCAGTCCGCTGCTGGGTAGAGCCTCTCAGAGGACAGTTATGCTAAGCTCCTGTCTGCAAGCGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR TCA 72 bp TGGAAAGCCTGCCCTCTAGTGGGAGAAATAACGAACTaGCCGCCCAACTGCATCATTTCAGAAACCACGGTC +
Preference number: 3 (lower is better)
Translates to: WKACPLVGEITN*PPNCIISETTV
Trigger: GACCGTGGTTTCTGAAATGATGCAGTTGGGCGGTCAGTTCGTTATTTCTCCCACTAGAGGGCAGGCTTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR CCA 72 bp CAGACTGGCCTCCTATTCAGAGATCTTCTGAAGTGCTaGGATAAAAGAAGTGTACCACCATGCCTGGCCCCA +
Preference number: 3 (lower is better)
Translates to: QTGLLFRDLLKC*DKRSVPPCLAP
Trigger: TGGGGCCAGGCATGGTGGTACACTTCTTTTATCCCAGCACTTCAGAAGATCTCTGAATAGGAGGCCAGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR CCA 72 bp CCCTGGCTGGACTGGAATTCCATCTATAGAGCAGACTaGCCTCCTATTCAGAGATCTTCTGAAGTGCTGGGA +
Preference number: 3 (lower is better)
Translates to: PWLDWNSIYRAD*PPIQRSSEVLG
Trigger: TCCCAGCACTTCAGAAGATCTCTGAATAGGAGGCCAGTCTGCTCTATAGATGGAATTCCAGTCCAGCCAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR CCA 72 bp TCAGGAGAGTGGAGCTGGTACTTAGAACTGGCAAGGTaGCTCAGCAGGTACAAGCACTTGGTACACAAACCT +
Preference number: 3 (lower is better)
Translates to: SGEWSWYLELAR*LSRYKHLVHKP
Trigger: AGGTTTGTGTACCAAGTGCTTGTACCTGCTGAGCCACCTTGCCAGTTCTAAGTACCAGCTCCACTCTCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR CCA 72 bp AATAAAGGGGCAAACATGGAGCCAAGGCTGGAGGAATaGCCAACCAATAACCAGACCCATCTCATGGGCAAG +
Preference number: 3 (lower is better)
Translates to: NKGANMEPRLEE*PTNNQTHLMGK
Trigger: CTTGCCCATGAGATGGGTCTGGTTATTGGTTGGCCATTCCTCCAGCCTTGGCTCCATGTTTGCCCCTTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR CCA 72 bp ATACTCACTGGTCATATGTCAGTGGTCATCCACAGGTaGCCAGAGCTACCCAGATGCACAGAAAGGACTGTC +
Preference number: 3 (lower is better)
Translates to: ILTGHMSVVIHR*PELPRCTERTV
Trigger: GACAGTCCTTTCTGTGCATCTGGGTAGCTCTGGCCACCTGTGGATGACCACTGACATATGACCAGTGAGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR CAA 90 bp ACGCCTTTAATCCAGCACTCGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGTTTGAAAGGCTGCTGTaGAAAGCAGTTTCCAGTGTA +
Preference number: 3 (lower is better)
Translates to: TPLIQHSGGRGRWISEFEFERLL*KAVSSV
Trigger: TACACTGGAAACTGCTTTCAACAGCAGCCTTTCAAA...CTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCGAGTGCTGGATTAAAGGCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR CAA 90 bp CAGGTGGATGTTAGTGAGCACAAGGCCAGCCTGGTCTACATGGAGAGTTCCAGGGAAAAACCCAAGCTATaGAAGTCTCAAACACTTGGC +
Preference number: 3 (lower is better)
Translates to: QVDVSEHKASLVYMESSREKPKL*KSQTLG
Trigger: GCCAAGTGTTTGAGACTTCAATAGCTTGGGTTTTTC...CCTGGAACTCTCCATGTAGACCAGGCTGGCCTTGTGCTCACTAACATCCACCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR TCA 72 bp CCACCCTCCACACCAATGCCTTTGAAAGGCTGCTGTTaGAAGCAGTTTCCAGTGTATTCAACCAGCATCCTG +
Preference number: 3 (lower is better)
Translates to: PPSTPMPLKGCC*KQFPVYSTSIL
Trigger: CAGGATGCTGGTTGAATACACTGGAAACTGCTTTCAACAGCAGCCTTTCAAAGGCATTGGTGTGGAGGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR TCA 72 bp AAAACCCAAGCTATTGAAGTCTCAAACACTTGGCACTaGGTTGTTCTGTCAGAAGTGGCCCTGCGGGGCACA +
Preference number: 3 (lower is better)
Translates to: KTQAIEVSNTWH*VVLSEVALRGT
Trigger: TGTGCCCCGCAGGGCCACTTCTGACAGAACAACTCAGTGCCAAGTGTTTGAGACTTCAATAGCTTGGGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR TCA 72 bp GTTCTATCTCCAGGGTCTATCGTGGAAGGAGAGAACTaGCTCCTGCAAGCTACACACACACACACACACACA +
Preference number: 3 (lower is better)
Translates to: VLSPGSIVEGEN*LLQATHTHTHT
Trigger: TGTGTGTGTGTGTGTGTGTGTAGCTTGCAGGAGTCAGTTCTCTCCTTCCACGATAGACCCTGGAGATAGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR TCA 72 bp CACCAGGTCAGCCTGATACTACGAGATTACTGGGGATaGCAGGCAAGAACGCAGTTCAAAGCTGAAAGGGAT +
Preference number: 3 (lower is better)
Translates to: HQVSLILRDYWG*QARTQFKAERD
Trigger: ATCCCTTTCAGCTTTGAACTGCGTTCTTGCCTGTCATCCCCAGTAATCTCGTAGTATCAGGCTGACCTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR CCA 72 bp CACAAGCTGGGACCAGAACGCATACACATAAGCCTGTaGGGGACACTTCTGATTCAAACCATAGCACGCAAT +
Preference number: 3 (lower is better)
Translates to: HKLGPERIHISL*GTLLIQTIARN
Trigger: ATTGCGTGCTATGGTTTGAATCAGAAGTGTCCCCCACAGGCTTATGTGTATGCGTTCTGGTCCCAGCTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR CAA 90 bp CAGGTGGATGTTAGTGAGCACAAGGCCAGCCTGGTCTACATGGAGAGTTCCAGGGTTATATGGGAGGGTTaGGAAGAAAGAAATGGAAGA +
Preference number: 3 (lower is better)
Translates to: QVDVSEHKASLVYMESSRVIWEG*EERNGR
Trigger: TCTTCCATTTCTTTCTTCCAAACCCTCCCATATAAC...CCTGGAACTCTCCATGTAGACCAGGCTGGCCTTGTGCTCACTAACATCCACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR TCA 72 bp AAGGAAAGCATGCCCTGCGTAGAGATAAAGAGATTCTaGCTGACAGTCTCCATCAGGAGAGTGGAGCTGGTA +
Preference number: 3 (lower is better)
Translates to: KESMPCVEIKRF*LTVSIRRVELV
Trigger: TACCAGCTCCACTCTCCTGATGGAGACTGTCAGTCAGAATCTCTTTATCTCTACGCAGGGCATGCTTTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR CCA 72 bp CAAAAACATGAGGGAGGAGAGGTTTGCTGTGGATCATaGTTTCACGGCCCTCAGTCCATCAAAGCAGAGAAT +
Preference number: 3 (lower is better)
Translates to: QKHEGGEVCCGS*FHGPQSIKAEN
Trigger: ATTCTCTGCTTTGATGGACTGAGGGCCGTGAAACCATGATCCACAGCAAACCTCTCCTCCCTCATGTTTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR CCA 72 bp AACTGCATGTTACTAGAATACAACAGGCAATGTTTCTaGGAGGAGGAAATGCCTGCGGATGCACCGCAGACA +
Preference number: 3 (lower is better)
Translates to: NCMLLEYNRQCF*EEEMPADAPQT
Trigger: TGTCTGCGGTGCATCCGCAGGCATTTCCTCCTCCCAGAAACATTGCCTGTTGTATTCTAGTAACATGCAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR CAA 90 bp ACGCCTTTAATCCAGCACTCGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGAGATTTACAGACATATaGACACTGAGAAATGGAGTG +
Preference number: 3 (lower is better)
Translates to: TPLIQHSGGRGRWISEFERFTDI*TLRNGV
Trigger: CACTCCATTTCTCAGTGTCAATATGTCTGTAAATCT...CTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCGAGTGCTGGATTAAAGGCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR CAA 90 bp ATATTCTATAAGAAACAAGTTAGTAGTCGGGTGTGGTGGCGCACGCCTTTAATCTCAGGGGCTTTCTTGTaGGACAGACAGGACCTGGAC +
Preference number: 3 (lower is better)
Translates to: IFYKKQVSSRVWWRTPLISGAFL*DRQDLD
Trigger: GTCCAGGTCCTGTCTGTCCAACAAGAAAGCCCCTGA...GATTAAAGGCGTGCGCCACCACACCCGACTACTAACTTGTTTCTTATAGAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR TCA 72 bp AGCAAGATGAACACTCGCAGAGAAAACATGAAACCCTaGAGCTCCATGTGCCATCAGGGTCACATAGTGTCA +
Preference number: 3 (lower is better)
Translates to: SKMNTRRENMKP*SSMCHQGHIVS
Trigger: TGACACTATGTGACCCTGATGGCACATGGAGCTTCAGGGTTTCATGTTTTCTCTGCGAGTGTTCATCTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR TCA 72 bp ACGGGACAGGCCAACGATCTGAAAAACCCAAGCTATTaGAGTCTCAAACACTTGGCACTGAGTTGTTCTGTC +
Preference number: 3 (lower is better)
Translates to: TGQANDLKNPSY*SLKHLALSCSV
Trigger: GACAGAACAACTCAGTGCCAAGTGTTTGAGACTTCAATAGCTTGGGTTTTTCAGATCGTTGGCCTGTCCCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR GCA 72 bp ACAAATATATCCCAAAAACATGAGGGAGGAGAGGTTTaGTGTGGATCATGGTTTCACGGCCCTCAGTCCATC +
Preference number: 3 (lower is better)
Translates to: TNISQKHEGGEV*CGSWFHGPQSI
Trigger: GATGGACTGAGGGCCGTGAAACCATGATCCACAGCAAACCTCTCCTCCCTCATGTTTTTGGGATATATTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR CCA 72 bp CAGAGACTGACCCACCAACCAAAGAGCTATATGGGGTaGTCTGAGGCTCCCCACATTAATGTACCAATTAAA +
Preference number: 3 (lower is better)
Translates to: QRLTHQPKSYMG*SEAPHINVPIK
Trigger: TTTAATTGGTACATTAATGTGGGGAGCCTCAGACCACCCCATATAGCTCTTTGGTTGGTGGGTCAGTCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR CCA 72 bp CTAAAAGAAATAAAGGGGCAAACATGGAGCCAAGGCTaGAGGAATGGCCAACCAATAACCAGACCCATCTCA +
Preference number: 3 (lower is better)
Translates to: LKEIKGQTWSQG*RNGQPITRPIS
Trigger: TGAGATGGGTCTGGTTATTGGTTGGCCATTCCTCCAGCCTTGGCTCCATGTTTGCCCCTTTATTTCTTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR CAA 90 bp AACTGTCCTCTGAGAGGCTCTACCCAGCAGCGGACTGAAACAAATGCAGATACCCAACAGTTAATACCTTaGGCTATGGATTTGAAAGAC +
Preference number: 3 (lower is better)
Translates to: NCPLRGSTQQRTETNADTQQLIP*AMDLKD
Trigger: GTCTTTCAAATCCATAGCCAAAGGTATTAACTGTTG...GGTATCTGCATTTGTTTCAGTCCGCTGCTGGGTAGAGCCTCTCAGAGGACAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR TCA 72 bp CATGCAATTAACATACAGCCCGATCCTCGACTGCTGTaGCATAGGACTGTTGTGAAAATGTGCACAAAGGAC +
Preference number: 3 (lower is better)
Translates to: HAINIQPDPRLL*HRTVVKMCTKD
Trigger: GTCCTTTGTGCACATTTTCACAACAGTCCTATGTCACAGCAGTCGAGGATCGGGCTGTATGTTAATTGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR CCA 72 bp TTAAATCAGTGTCTCAACACGTATCCCTGGCTGGACTaGAATTCCATCTATAGAGCAGACTGGCCTCCTATT +
Preference number: 3 (lower is better)
Translates to: LNQCLNTYPWLD*NSIYRADWPPI
Trigger: AATAGGAGGCCAGTCTGCTCTATAGATGGAATTCCAGTCCAGCCAGGGATACGTGTTGAGACACTGATTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR CCA 72 bp CTAATTAAGTCAACTGCGAAATGTCGACAACAATTTTaGCCCTGGTGGTGTTTTCTGGTCCACAGCACCTAC +
Preference number: 3 (lower is better)
Translates to: LIKSTAKCRQQF*PWWCFLVHSTY
Trigger: GTAGGTGCTGTGGACCAGAAAACACCACCAGGGCCAAAATTGTTGTCGACATTTCGCAGTTGACTTAATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR TCA 72 bp GCTCTTCTGCTTTCTCGAACTTTGGTGAAACCTCTGTaGCCCTGTAACTCTTTAAGATGCTGGCAAAACACT +
Preference number: 3 (lower is better)
Translates to: ALLLSRTLVKPL*PCNSLRCWQNT
Trigger: AGTGTTTTGCCAGCATCTTAAAGAGTTACAGGGTCACAGAGGTTTCACCAAAGTTCGAGAAAGCAGAAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR TCA 72 bp ACTCTGCATAAAGAATTACATGCAACTAAAGAATGCTaGAAGTCGGAGAAACAGTTTTCCTCCGGGAGGGGC +
Preference number: 3 (lower is better)
Translates to: TLHKELHATKEC*KSEKQFSSGRG
Trigger: GCCCCTCCCGGAGGAAAACTGTTTCTCCGACTTTCAGCATTCTTTAGTTGCATGTAATTCTTTATGCAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR TCA 72 bp GTTACTAAGTTCAGGCAGACACAGTCAGAATTGACATaGAGTATAAGACACCCAGCTAGTATCAGGGACCTG +
Preference number: 3 (lower is better)
Translates to: VTKFRQTQSELT*SIRHPASIRDL
Trigger: CAGGTCCCTGATACTAGCTGGGTGTCTTATACTTCATGTCAATTCTGACTGTGTCTGCCTGAACTTAGTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR GCA 72 bp ATTATCCACGTGTATAGTTTTGTGCATGAGTACAAGTaGTTACAGGGGCCAGAAGAGGATGTGAGATCCTCA +
Preference number: 3 (lower is better)
Translates to: IIHVYSFVHEYK*LQGPEEDVRSS
Trigger: TGAGGATCTCACATCCTCTTCTGGCCCCTGTAAGCACTTGTACTCATGCACAAAACTATACACGTGGATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR CCA 72 bp AAGTTTGATAATGAGTTCTATCTCCAGGGTCTATCGTaGAAGGAGAGAACTGACTCCTGCAAGCTACACACA +
Preference number: 3 (lower is better)
Translates to: KFDNEFYLQGLS*KERTDSCKLHT
Trigger: TGTGTGTAGCTTGCAGGAGTCAGTTCTCTCCTTCCACGATAGACCCTGGAGATAGAACTCATTATCAAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR CAA 90 bp ATATTCTATAAGAAACAAGTTAGTAGTCGGGTGTGGTGGCGCACGCCTTTAATCTATGGTGGGGATAACTaGATACACTTTGCAACAGGG +
Preference number: 3 (lower is better)
Translates to: IFYKKQVSSRVWWRTPLIYGGDN*IHFATG
Trigger: CCCTGTTGCAAAGTGTATCAAGTTATCCCCACCATA...GATTAAAGGCGTGCGCCACCACACCCGACTACTAACTTGTTTCTTATAGAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR TCA 72 bp AAGATCTCACTGTGCTACACTGACTTACTTTATCGATaGCATGCAATTAACATACAGCCCGATCCTCGACTG +
Preference number: 3 (lower is better)
Translates to: KISLCYTDLLYR*HAINIQPDPRL
Trigger: CAGTCGAGGATCGGGCTGTATGTTAATTGCATGTCATCGATAAAGTAAGTCAGTGTAGCACAGTGAGATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR GCA 72 bp ATAAATATTAAAAGGTCTTTATGTCAGGCTTGGTGGTaGAGGTCTTTCATGTCAACACTTGGAGGCAGAGGC +
Preference number: 3 (lower is better)
Translates to: INIKRSLCQAWW*RSFMSTLGGRG
Trigger: GCCTCTGCCTCCAAGTGTTGACATGAAAGACCTGCACCACCAAGCCTGACATAAAGACCTTTTAATATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR CCA 72 bp GATACACTTTGCAACAGGGAGCACATGAAAGTTAACTaGGGCGCATCATCTTGTCTTTTTAAACTAGTCACG +
Preference number: 3 (lower is better)
Translates to: DTLCNREHMKVN*GASSCLFKLVT
Trigger: CGTGACTAGTTTAAAAAGACAAGATGATGCGCCCCAGTTAACTTTCATGTGCTCCCTGTTGCAAAGTGTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR CCA 72 bp AACAAACCAATCCGTCTTACCCTGTATGACTTATTCTaGGATGGTACCAGTGAGGTAACCAAAATGAGCCTT +
Preference number: 3 (lower is better)
Translates to: NKPIRLTLYDLF*DGTSEVTKMSL
Trigger: AAGGCTCATTTTGGTTACCTCACTGGTACCATCCCAGAATAAGTCATACAGGGTAAGACGGATTGGTTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR CAA 90 bp CATAGCACGCAATCCACAGCTCTCATTTCATACTGCAAATTCCATAATTTAGGATCAACCAGCATCCTGTaGGCATTAAGAGGAATGACT +
Preference number: 3 (lower is better)
Translates to: HSTQSTALISYCKFHNLGSTSIL*ALRGMT
Trigger: AGTCATTCCTCTTAATGCCAACAGGATGCTGGTTGA...TCCTAAATTATGGAATTTGCAGTATGAAATGAGAGCTGTGGATTGCGTGCTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR CAA 90 bp ATTTACTCATTCAACAAGCATTTTCACACTACATATAGGGACGTACCAGGAGTGTCTTTGTCTCGGTCCTaGTTTGTCTCTCACACACAT +
Preference number: 3 (lower is better)
Translates to: IYSFNKHFHTTYRDVPGVSLSRS*FVSHTH
Trigger: ATGTGTGTGAGAGACAAACAAGGACCGAGACAAAGA...CACTCCTGGTACGTCCCTATATGTAGTGTGAAAATGCTTGTTGAATGAGTAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR CAA 90 bp ATATTCTATAAGAAACAAGTTAGTAGTCGGGTGTGGTGGCGCACGCCTTTAATCAGTCATCTTAACCTGTaGGTAAATACTGAGAGCTCT +
Preference number: 3 (lower is better)
Translates to: IFYKKQVSSRVWWRTPLISHLNL*VNTESS
Trigger: AGAGCTCTCAGTATTTACCAACAGGTTAAGATGACT...GATTAAAGGCGTGCGCCACCACACCCGACTACTAACTTGTTTCTTATAGAATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR TCA 72 bp ACAGACATATTGACACTGAGAAATGGAGTGATTCCATaGTGTAGATATGGCAAAAAGGGCTCCCCTCAAATA +
Preference number: 3 (lower is better)
Translates to: TDILTLRNGVIP*CRYGKKGSPQI
Trigger: TATTTGAGGGGAGCCCTTTTTGCCATATCTACATCATGGAATCACTCCATTTCTCAGTGTCAATATGTCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR GCA 72 bp ACGTACGTACAAAAATGTCACAGTGAAACCAGCCCATaGCTTTGTATGATAACCAAAAGAATAGAAGGCAAC +
Preference number: 3 (lower is better)
Translates to: TYVQKCHSETSP*LCMITKRIEGN
Trigger: GTTGCCTTCTATTCTTTTGGTTATCATACAAAGGCATGGGCTGGTTTCACTGTGACATTTTTGTACGTACGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR GCA 72 bp ACTGGAAGAGTTAGAAGAGGCAAGCCAGAAAACAAGTaGACATATACAGAAATCTTCCAATACTGGCTTTTT +
Preference number: 3 (lower is better)
Translates to: TGRVRRGKPENK*TYTEIFQYWLF
Trigger: AAAAAGCCAGTATTGGAAGATTTCTGTATATGTGCACTTGTTTTCTGGCTTGCCTCTTCTAACTCTTCCAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR GCA 72 bp TTAACTGAGTTGACTTCGGAACTTTTCTTCTTGGGTTaGCACAGGTTGTACAATCAAATTTGTCCTTCTCTA +
Preference number: 3 (lower is better)
Translates to: LTELTSELFFLG*HRLYNQICPSL
Trigger: TAGAGAAGGACAAATTTGATTGTACAACCTGTGGCAACCCAAGAAGAAAAGTTCCGAAGTCAACTCAGTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR GCA 72 bp AATACAAGACTCTTGAATAGTAGTTGCCTTGGAGTTTaGAACATAGCTTTACAACTGCTCTTAGTCCCCTTT +
Preference number: 3 (lower is better)
Translates to: NTRLLNSSCLGV*NIALQLLLVPF
Trigger: AAAGGGGACTAAGAGCAGTTGTAAAGCTATGTTGCAAACTCCAAGGCAACTACTATTCAAGAGTCTTGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR CCA 72 bp AAACCAAGTTATGCATACTCCCTATTAATTCATTCCTaGTCAACATTCCTAGTCCGAGAGGAAAGAATGAGA +
Preference number: 3 (lower is better)
Translates to: KPSYAYSLLIHS*STFLVREERMR
Trigger: TCTCATTCTTTCCTCTCGGACTAGGAATGTTGACCAGGAATGAATTAATAGGGAGTATGCATAACTTGGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR TCA 72 bp TCTTTTCTGTTTGGTTCCTGGAAAGAACGTAGGTGCTaGTTGCTATCTTTCTATAAGAAATGTGGGTTTTGT +
Preference number: 3 (lower is better)
Translates to: SFLFGSWKERRC*LLSFYKKCGFC
Trigger: ACAAAACCCACATTTCTTATAGAAAGATAGCAATCAGCACCTACGTTCTTTCCAGGAACCAAACAGAAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR TCA 72 bp TGGATTTACATACCAGGCAGTGTTCTGTACATGGGATaGATGCATGACACAAAATTACTCCTAATTAAGTCA +
Preference number: 3 (lower is better)
Translates to: WIYIPGSVLYMG*MHDTKLLLIKS
Trigger: TGACTTAATTAGGAGTAATTTTGTGTCATGCATTCATCCCATGTACAGAACACTGCCTGGTATGTAAATCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR-3UTR CAA 90 bp AACTTGATGGCTTCTTCTAATGGATTGTCAACCCTTTCTAGTTTTTCAGGAATATGTTGTTTGCTGTCATaGGTTAAAGGGTTATCATGT +
Preference number: 3 (lower is better)
Translates to: NLMASSNGLSTLSSFSGICCLLS*VKGLSC
Trigger: ACATGATAACCCTTTAACCAATGACAGCAAACAACA...TATTCCTGAAAAACTAGAAAGGGTTGACAATCCATTAGAAGAAGCCATCAAGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000163486.2
3UTR GCA 72 bp TTCTGTTTGGTTCCTGGAAAGAACGTAGGTGCTGATTaGTATCTTTCTATAAGAAATGTGGGTTTTGTTTAT +
Preference number: 3 (lower is better)
Translates to: FCLVPGKNVGAD*YLSIRNVGFVY
Trigger: ATAAACAAAACCCACATTTCTTATAGAAAGATAGCAATCAGCACCTACGTTCTTTCCAGGAACCAAACAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR TCA 72 bp AACACCAATTTTCAGCATTCCAATCAATCAAGTTTCTaGATACTTCACTGGCTTCTTTTAGTCTTCCCAATT +
Preference number: 3 (lower is better)
Translates to: NTNFQHSNQSSF*ILHWLLLVFPI
Trigger: AATTGGGAAGACTAAAAGAAGCCAGTGAAGTATTCAGAAACTTGATTGATTGGAATGCTGAAAATTGGTGTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000169500.2
3UTR CCA 72 bp CAAAGAATCCTATTTACTGTGGCACCAAAGCATATCTaGAAGTTGGTTATTGACAGTCACATTTTCTATAAA +
Preference number: 3 (lower is better)
Translates to: QRILFTVAPKHI*KLVIDSHIFYK
Trigger: TTTATAGAAAATGTGACTGTCAATAACCAACTTCCAGATATGCTTTGGTGCCACAGTAAATAGGATTCTTTG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
CDS-3UTR TCA 90 bp GAAGAGCTGAGGAAAGGACTGAAGGCCCTGAAGGGGGTAGGAACTCCCCAGCATCGGCAGCCTCCTGGGTaGAACTGCTCTGGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: EELRKGLKALKGVGTPQHRQPPG*NCSGVL
Trigger: CAGCACCCCAGAGCAGTTTCACCCAGGAGGCTGCCG...ATGCTGGGGAGTTCCTACCCCCTTCAGGGCCTTCAGTCCTTTCCTCAGCTCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
CDS-3UTR TCA 90 bp AGCAGGGGAAGAGTGGTGCCGAGTGCCCCACAACTGAGGGCTGCTGAGGACTGCACATGCCAACAGACATaGCTCCTGACGTCACTGCGA +
Preference number: 4 (lower is better)
Translates to: SRGRVVPSAPQLRAAEDCTCQQT*LLTSLR
Trigger: TCGCAGTGACGTCAGGAGTCATGTCTGTTGGCATGT...GCAGTCCTCAGCAGCCCTCAGTTGTGGGGCACTCGGCACCACTCTTCCCCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163486.2
3UTR CAA 72 bp ACCTGCAGCATCAGTAAGCAGCTAACCCTCCTGCAATaGCTCTGGCTACCCATGCGGGTCTGGGCCAGAGCG +
Preference number: 4 (lower is better)
Translates to: TCSISKQLTLLQ*LWLPMRVWARA
Trigger: CGCTCTGGCCCAGACCCGCATGGGTAGCCAGAGCAATTGCAGGAGGGTTAGCTGCTTACTGATGCTGCAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
CDS-3UTR CCA 90 bp CTCAGCGGCAGCCTCCTGGGTGAAACTGCTCTGGGGTGCTGCTTGCTGACTTCCGGAAGCACGCTGTGTTaGGCGCAACTGAAGAAGTTG +
Preference number: 4 (lower is better)
Translates to: LSGSLLGETALGCCLLTSGSTLC*AQLKKL
Trigger: CAACTTCTTCAGTTGCGCCCAACACAGCGTGCTTCC...GGAAGTCAGCAAGCAGCACCCCAGAGCAGTTTCACCCAGGAGGCTGCCGCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169500.2
CDS-3UTR TCA 90 bp CTGACTACGACGCCTGTGGGTTTATACTGCGTCAGCAGGGGAAGAGTGGTGCCGAACAGACATGACTCCTaGCGTCACTGCGAAGTCCTT +
Preference number: 4 (lower is better)
Translates to: LTTTPVGLYCVSRGRVVPNRHDS*RHCEVL
Trigger: AAGGACTTCGCAGTGACGTCAGGAGTCATGTCTGTT...CGGCACCACTCTTCCCCTGCTGACGCAGTATAAACCCACAGGCGTCGTAGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163486.2
CDS-3UTR CCA 90 bp GAAGAGCTGAGGAAAGGACTGAAGGCCCTGAAGGGGGTAGGAACTCCCCAGCATGGAAGCACGCTGTGTTaGGCGCAACTGAAGAAGTTG +
Preference number: 4 (lower is better)
Translates to: EELRKGLKALKGVGTPQHGSTLC*AQLKKL
Trigger: CAACTTCTTCAGTTGCGCCCAACACAGCGTGCTTCC...ATGCTGGGGAGTTCCTACCCCCTTCAGGGCCTTCAGTCCTTTCCTCAGCTCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
CDS-3UTR GCA 90 bp CAGGTGGATGTTAGTGAGCACAAGGCCAGCCTGGTCTACATGGAGAGTTCCAGGCGTGTCCAAAGACTGTaGCTCATCCATCCACTGTGC +
Preference number: 4 (lower is better)
Translates to: QVDVSEHKASLVYMESSRRVQRL*LIHPLC
Trigger: GCACAGTGGATGGATGAGGCACAGTCTTTGGACACG...CCTGGAACTCTCCATGTAGACCAGGCTGGCCTTGTGCTCACTAACATCCACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR CAA 72 bp CCCAAGCTATTGAAGTCTCAAACACTTGGCACTGAGTaGTTCTGTCAGAAGTGGCCCTGCGGGGCACAGGCA +
Preference number: 4 (lower is better)
Translates to: PKLLKSQTLGTE*FCQKWPCGAQA
Trigger: TGCCTGTGCCCCGCAGGGCCACTTCTGACAGAACAACTCAGTGCCAAGTGTTTGAGACTTCAATAGCTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
CDS-3UTR TCA 90 bp ATCATCGGTTATCTCAAGAAAATGCTGACTACGACGCCTGTGGGTTTATACTGCCGGCAGCCTCCTGGGTaGAACTGCTCTGGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: IIGYLKKMLTTTPVGLYCRQPPG*NCSGVL
Trigger: CAGCACCCCAGAGCAGTTTCACCCAGGAGGCTGCCG...GCAGTATAAACCCACAGGCGTCGTAGTCAGCATTTTCTTGAGATAACCGATGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163486.2
CDS-3UTR GCA 90 bp AGCAGGGGAAGAGTGGTGCCGAGTGCCCCACAACTGAGGGCTGCTGAGGACTGCTCAAACCACATACACTaGATTTCATTCAGATTCTCC +
Preference number: 4 (lower is better)
Translates to: SRGRVVPSAPQLRAAEDCSNHIH*ISFRFS
Trigger: GGAGAATCTGAATGAAATGCAGTGTATGTGGTTTGA...GCAGTCCTCAGCAGCCCTCAGTTGTGGGGCACTCGGCACCACTCTTCCCCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163486.2
CDS-3UTR CCA 90 bp ACGCCTTTAATCCAGCACTCGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGAGTGGGAGCAGGCTATaGCAGGTCTTCCTATACTCT +
Preference number: 4 (lower is better)
Translates to: TPLIQHSGGRGRWISEFESGSRL*QVFLYS
Trigger: AGAGTATAGGAAGACCTGCCATAGCCTGCTCCCACT...CTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCGAGTGCTGGATTAAAGGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
CDS-3UTR TCA 90 bp AGGGAGGAGAGGTTTGCTGTGGATCATGGTTTCACGGCCCTCAGTCCATCAAAGAACAGACATGACTCCTaGCGTCACTGCGAAGTCCTT +
Preference number: 4 (lower is better)
Translates to: REERFAVDHGFTALSPSKNRHDS*RHCEVL
Trigger: AAGGACTTCGCAGTGACGTCAGGAGTCATGTCTGTT...CTTTGATGGACTGAGGGCCGTGAAACCATGATCCACAGCAAACCTCTCCTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
CDS-3UTR TCA 90 bp CACAGCAAGGGAACAGTGAGTCAAAGCAAGATGAACACTCGCAGAGAAAACATGGCAGGAAAGCAGGTGTaGGTGGGAGCAGGCTATGGC +
Preference number: 4 (lower is better)
Translates to: HSKGTVSQSKMNTRRENMAGKQV*VGAGYG
Trigger: GCCATAGCCTGCTCCCACTCACACCTGCTTTCCTGC...CATGTTTTCTCTGCGAGTGTTCATCTTGCTTTGACTCACTGTTCCCTTGCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
CDS-3UTR GCA 90 bp GTGGTGGCGCACGCCTTTAATCCAGCACTCGGGAGGCAGAGGCAGGTGGATTTCTTTATCATAATGCTGTaGCAGGAAATACTGGACCCA +
Preference number: 4 (lower is better)
Translates to: VVAHAFNPALGRQRQVDFFIIML*QEILDP
Trigger: TGGGTCCAGTATTTCCTGGCACAGCATTATGATAAA...GAAATCCACCTGCCTCTGCCTCCCGAGTGCTGGATTAAAGGCGTGCGCCACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
CDS-3UTR CCA 90 bp CTGTGGGTTTATACTGCGTCAGCAGGGGAAGAGTGGTGCCGAGTGCCCCACAACGCAAATGATAAGCGATaGCATATCCAATCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: LWVYTASAGEEWCRVPHNANDKR*HIQSRK
Trigger: CTTCCTGGATTGGATATGCCATCGCTTATCATTTGC...GTTGTGGGGCACTCGGCACCACTCTTCCCCTGCTGACGCAGTATAAACCCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163486.2
CDS-3UTR CCA 90 bp GTGGTGGCGCACGCCTTTAATCCAGCACTCGGGAGGCAGAGGCAGGTGGATTTCCATAAGCTATTTTGTTaGGAGGAACTTGCTGCGTTT +
Preference number: 4 (lower is better)
Translates to: VVAHAFNPALGRQRQVDFHKLFC*EELAAF
Trigger: AAACGCAGCAAGTTCCTCCCAACAAAATAGCTTATG...GAAATCCACCTGCCTCTGCCTCCCGAGTGCTGGATTAAAGGCGTGCGCCACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
CDS-3UTR CCA 90 bp GTGGTGGCGCACGCCTTTAATCCAGCACTCGGGAGGCAGAGGCAGGTGGATTTCCTATACTCTTCATATTaGGAGCTACAGTTCCCAAAG +
Preference number: 4 (lower is better)
Translates to: VVAHAFNPALGRQRQVDFLYSSY*ELQFPK
Trigger: CTTTGGGAACTGTAGCTCCCAATATGAAGAGTATAG...GAAATCCACCTGCCTCTGCCTCCCGAGTGCTGGATTAAAGGCGTGCGCCACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
CDS-3UTR TCA 90 bp AGCACCAAACATCTTTCTGGCATCTCCAGCATCCTAGAATCACCTGCTCAGGGAACATGCCAACAGACATaGCTCCTGACGTCACTGCGA +
Preference number: 4 (lower is better)
Translates to: STKHLSGISSILESPAQGTCQQT*LLTSLR
Trigger: TCGCAGTGACGTCAGGAGTCATGTCTGTTGGCATGT...TCCCTGAGCAGGTGATTCTAGGATGCTGGAGATGCCAGAAAGATGTTTGGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
CDS-3UTR GCA 90 bp CTGACTACGACGCCTGTGGGTTTATACTGCGTCAGCAGGGGAAGAGTGGTGCCGAGAACGAAGTTGCAATaGCTTTTCCAAGCCTTCATA +
Preference number: 4 (lower is better)
Translates to: LTTTPVGLYCVSRGRVVPRTKLQ*LFQAFI
Trigger: TATGAAGGCTTGGAAAAGGCATTGCAACTTCGTTCT...CGGCACCACTCTTCCCCTGCTGACGCAGTATAAACCCACAGGCGTCGTAGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163486.2
CDS-3UTR GCA 90 bp AGGGAGGAGAGGTTTGCTGTGGATCATGGTTTCACGGCCCTCAGTCCATCAAAGCTCATCCATCCACTGTaGGGCTTCTTTGAGATTACC +
Preference number: 4 (lower is better)
Translates to: REERFAVDHGFTALSPSKLIHPL*GFFEIT
Trigger: GGTAATCTCAAAGAAGCCGCACAGTGGATGGATGAG...CTTTGATGGACTGAGGGCCGTGAAACCATGATCCACAGCAAACCTCTCCTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
CDS-3UTR TCA 90 bp AGGGAGGAGAGGTTTGCTGTGGATCATGGTTTCACGGCCCTCAGTCCATCAAAGACTGTGCGGCTTCTTTaGGATTACCCATATGCTTGT +
Preference number: 4 (lower is better)
Translates to: REERFAVDHGFTALSPSKTVRLL*DYPYAC
Trigger: ACAAGCATATGGGTAATCTCAAAGAAGCCGCACAGT...CTTTGATGGACTGAGGGCCGTGAAACCATGATCCACAGCAAACCTCTCCTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
CDS-3UTR CCA 90 bp ACAGGTGGCCAGAGCTACCCAGATGCACAGAAAGGACTGTCCGACAGCTGTACTGCAAATGATAAGCGATaGCATATCCAATCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: TGGQSYPDAQKGLSDSCTANDKR*HIQSRK
Trigger: CTTCCTGGATTGGATATGCCATCGCTTATCATTTGC...AGTACAGCTGTCGGACAGTCCTTTCTGTGCATCTGGGTAGCTCTGGCCACCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
CDS-3UTR CCA 90 bp CTCTTTAAGATGCTGGCAAAACACTCCTCCTTCAAACCAAAGGTCTCTGAGCCAGAAAGCAGGTGTGAGTaGGAGCAGGCTATGGCAGGT +
Preference number: 4 (lower is better)
Translates to: LFKMLAKHSSFKPKVSEPESRCE*EQAMAG
Trigger: ACCTGCCATAGCCTGCTCCCACTCACACCTGCTTTC...TGGCTCAGAGACCTTTGGTTTGAAGGAGGAGTGTTTTGCCAGCATCTTAAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR CAA 72 bp TACAAGCACTTGGTACACAAACCTGACAACATGACCTaGATCCCTGGAACCCACGGTGGGAGGAGAGAAACA +
Preference number: 4 (lower is better)
Translates to: YKHLVHKPDNMT*IPGTHGGRRET
Trigger: TGTTTCTCTCCTCCCACCGTGGGTTCCAGGGATCAAGGTCATGTTGTCAGGTTTGTGTACCAAGTGCTTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR CAA 72 bp GAAGGGGGTAGGAACTCCCCAGCATCAACTAACCTGTaGGTCTTCCCTGTCAGTCATCTTAACCTGTTGGTA +
Preference number: 4 (lower is better)
Translates to: EGGRNSPASTNL*VFPVSHLNLLV
Trigger: TACCAACAGGTTAAGATGACTGACAGGGAAGACCAACAGGTTAGTTGATGCTGGGGAGTTCCTACCCCCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR CAA 72 bp AAGGGATGGGTCTGGGTCAGACCCGGAGTTGAGACATaGTGTGGCCTTAAGAAAACTGTTACCTTTGAGTCG +
Preference number: 4 (lower is better)
Translates to: KGWVWVRPGVET*CGLKKTVTFES
Trigger: CGACTCAAAGGTAACAGTTTTCTTAAGGCCACACAATGTCTCAACTCCGGGTCTGACCCAGACCCATCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
CDS-3UTR TCA 90 bp ACAGGTGGCCAGAGCTACCCAGATGCACAGAAAGGACTGTCCGACAGCTGTACTGTATGGAAGTCAAACTaGTCATCGGTTATCTCAAGA +
Preference number: 4 (lower is better)
Translates to: TGGQSYPDAQKGLSDSCTVWKSN*SSVISR
Trigger: TCTTGAGATAACCGATGATCAGTTTGACTTCCATAC...AGTACAGCTGTCGGACAGTCCTTTCTGTGCATCTGGGTAGCTCTGGCCACCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
CDS-3UTR TCA 90 bp GAAGAGCTGAGGAAAGGACTGAAGGCCCTGAAGGGGGTAGGAACTCCCCAGCATTGCTTTTTCTTGCCTTaGCTTGTCCAGAAAATACAT +
Preference number: 4 (lower is better)
Translates to: EELRKGLKALKGVGTPQHCFFLP*LVQKIH
Trigger: ATGTATTTTCTGGACAAGTCAAGGCAAGAAAAAGCA...ATGCTGGGGAGTTCCTACCCCCTTCAGGGCCTTCAGTCCTTTCCTCAGCTCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR CAA 72 bp ACCACCCTCCACACCAATGCCTTTGAAAGGCTGCTGTaGAAAGCAGTTTCCAGTGTATTCAACCAGCATCCT +
Preference number: 4 (lower is better)
Translates to: TTLHTNAFERLL*KAVSSVFNQHP
Trigger: AGGATGCTGGTTGAATACACTGGAAACTGCTTTCAACAGCAGCCTTTCAAAGGCATTGGTGTGGAGGGTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR CAA 72 bp ATCACTTTACCAAAAATCCTAGATCACACAGGTGCCTaGGACCAGAGCCCCCAGCTCTTCCTATCCTTCACT +
Preference number: 4 (lower is better)
Translates to: ITLPKILDHTGA*DQSPQLFLSFT
Trigger: AGTGAAGGATAGGAAGAGCTGGGGGCTCTGGTCCAAGGCACCTGTGTGATCTAGGATTTTTGGTAAAGTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR CAA 72 bp AAAGCTGAAAGGGATGGGTCTGGGTCAGACCCGGAGTaGAGACATTGTGTGGCCTTAAGAAAACTGTTACCT +
Preference number: 4 (lower is better)
Translates to: KAERDGSGSDPE*RHCVALRKLLP
Trigger: AGGTAACAGTTTTCTTAAGGCCACACAATGTCTCAACTCCGGGTCTGACCCAGACCCATCCCTTTCAGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
CDS-3UTR GCA 90 bp ATCATCGGTTATCTCAAGAAAATGCTGACTACGACGCCTGTGGGTTTATACTGCCGTGTCCAAAGACTGTaGCTCATCCATCCACTGTGC +
Preference number: 4 (lower is better)
Translates to: IIGYLKKMLTTTPVGLYCRVQRL*LIHPLC
Trigger: GCACAGTGGATGGATGAGGCACAGTCTTTGGACACG...GCAGTATAAACCCACAGGCGTCGTAGTCAGCATTTTCTTGAGATAACCGATGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163486.2
CDS-3UTR GCA 90 bp AGGGAGGAGAGGTTTGCTGTGGATCATGGTTTCACGGCCCTCAGTCCATCAAAGGTTATCTCAAGAAAATaGCTCTCTACTTCATGGCAC +
Preference number: 4 (lower is better)
Translates to: REERFAVDHGFTALSPSKVISRK*LSTSWH
Trigger: GTGCCATGAAGTAGAGAGGCATTTTCTTGAGATAAC...CTTTGATGGACTGAGGGCCGTGAAACCATGATCCACAGCAAACCTCTCCTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
CDS-3UTR GCA 90 bp AGAGCCCCCAGCTCTTCCTATCCTTCACTCATCTCCACGACTCATCCCACGAGTGCAATTGCTTTTTCTTaGCTTGACTTGTCCAGAAAA +
Preference number: 4 (lower is better)
Translates to: RAPSSSYPSLISTTHPTSAIAFS*LDLSRK
Trigger: TTTTCTGGACAAGTCAAGGCAAGAAAAAGCAATTGC...ACTCGTGGGATGAGTCGTGGAGATGAGTGAAGGATAGGAAGAGCTGGGGGCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
CDS-3UTR GCA 90 bp AAAATGCTGACTACGACGCCTGTGGGTTTATACTGCGTCAGCAGGGGAAGAGTGTTGGGAGGAACTTGCTaGGTTTGTCTAAATTCTTCT +
Preference number: 4 (lower is better)
Translates to: KMLTTTPVGLYCVSRGRVLGGTC*VCLNSS
Trigger: AGAAGAATTTAGACAAACGCAGCAAGTTCCTCCCAA...CACTCTTCCCCTGCTGACGCAGTATAAACCCACAGGCGTCGTAGTCAGCATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163486.2
CDS-3UTR GCA 90 bp AACTGTCCTCTGAGAGGCTCTACCCAGCAGCGGACTGAAACAAATGCAGATACCGGGTCATCTTTCTCATaGAGTATGTATGGAAGTCAA +
Preference number: 4 (lower is better)
Translates to: NCPLRGSTQQRTETNADTGSSFS*SMYGSQ
Trigger: TTGACTTCCATACATACTGCATGAGAAAGATGACCC...GGTATCTGCATTTGTTTCAGTCCGCTGCTGGGTAGAGCCTCTCAGAGGACAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
CDS-3UTR CCA 90 bp AAACTGATCATCGGTTATCTCAAGAAAATGCTGACTACGACGCCTGTGGGTTTAGGAAGCACGCTGTGTTaGGCGCAACTGAAGAAGTTG +
Preference number: 4 (lower is better)
Translates to: KLIIGYLKKMLTTTPVGLGSTLC*AQLKKL
Trigger: CAACTTCTTCAGTTGCGCCCAACACAGCGTGCTTCC...TAAACCCACAGGCGTCGTAGTCAGCATTTTCTTGAGATAACCGATGATCAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163486.2
CDS-3UTR CCA 90 bp ACAGGTGGCCAGAGCTACCCAGATGCACAGAAAGGACTGTCCGACAGCTGTACTTTTGCTCACAATGTCTaGAAGATTACTGTGATTAGA +
Preference number: 4 (lower is better)
Translates to: TGGQSYPDAQKGLSDSCTFAHNV*KITVIR
Trigger: TCTAATCACAGTAATCTTCCAGACATTGTGAGCAAA...AGTACAGCTGTCGGACAGTCCTTTCTGTGCATCTGGGTAGCTCTGGCCACCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR CAA 72 bp TGTGTTCTAGTGTGTACTCTGCCAAGTCCTCCTCCCTaGAAGAAAACCTCTCAGAGTAGCTGCTTGCTAAGT +
Preference number: 4 (lower is better)
Translates to: CVLVCTLPSPPP*KKTSQSSCLLS
Trigger: ACTTAGCAAGCAGCTACTCTGAGAGGTTTTCTTCAAGGGAGGAGGACTTGGCAGAGTACACACTAGAACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR CAA 72 bp AACCTGTTGGTCTTCCCTGTCAGTCATCTTAACCTGTaGGTAAATACTGAGAGCTCTCAGAGACTGACCCAC +
Preference number: 4 (lower is better)
Translates to: NLLVFPVSHLNL*VNTESSQRLTH
Trigger: GTGGGTCAGTCTCTGAGAGCTCTCAGTATTTACCAACAGGTTAAGATGACTGACAGGGAAGACCAACAGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
CDS-3UTR TCA 90 bp AACTGTCCTCTGAGAGGCTCTACCCAGCAGCGGACTGAAACAAATGCAGATACCATAAGTTCTTCCTTATaGCCACTGGTAACTTCTTCT +
Preference number: 4 (lower is better)
Translates to: NCPLRGSTQQRTETNADTISSSL*PLVTSS
Trigger: AGAAGAAGTTACCAGTGGTCATAAGGAAGAACTTAT...GGTATCTGCATTTGTTTCAGTCCGCTGCTGGGTAGAGCCTCTCAGAGGACAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
CDS-3UTR GCA 90 bp ATCATCGGTTATCTCAAGAAAATGCTGACTACGACGCCTGTGGGTTTATACTGCCTCATCCATCCACTGTaGGGCTTCTTTGAGATTACC +
Preference number: 4 (lower is better)
Translates to: IIGYLKKMLTTTPVGLYCLIHPL*GFFEIT
Trigger: GGTAATCTCAAAGAAGCCGCACAGTGGATGGATGAG...GCAGTATAAACCCACAGGCGTCGTAGTCAGCATTTTCTTGAGATAACCGATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163486.2
CDS-3UTR CCA 90 bp AGGGAGGAGAGGTTTGCTGTGGATCATGGTTTCACGGCCCTCAGTCCATCAAAGGTTGTTTGCTGTCATTaGTTAAAGGGTTATCATGTA +
Preference number: 4 (lower is better)
Translates to: REERFAVDHGFTALSPSKVVCCH*LKGYHV
Trigger: TACATGATAACCCTTTAACCAATGACAGCAAACAAC...CTTTGATGGACTGAGGGCCGTGAAACCATGATCCACAGCAAACCTCTCCTCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
CDS-3UTR CCA 90 bp CTCTTTAAGATGCTGGCAAAACACTCCTCCTTCAAACCAAAGGTCTCTGAGCCATTCATTAAGAGCTTGTaGTCAGCTGTGTGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: LFKMLAKHSSFKPKVSEPFIKSL*SAVWFS
Trigger: GCTGAACCACACAGCTGACCACAAGCTCTTAATGAA...TGGCTCAGAGACCTTTGGTTTGAAGGAGGAGTGTTTTGCCAGCATCTTAAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
CDS-3UTR TCA 90 bp GCAAGGGTTTTCAGAGGAGTGAGGAACTTGATGGCTTCTTCTAATGGATTGTCAACTGTGCGGCTTCTTTaGGATTACCCATATGCTTGT +
Preference number: 4 (lower is better)
Translates to: ARVFRGVRNLMASSNGLSTVRLL*DYPYAC
Trigger: ACAAGCATATGGGTAATCTCAAAGAAGCCGCACAGT...TGACAATCCATTAGAAGAAGCCATCAAGTTCCTCACTCCTCTGAAAACCCTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163486.2
CDS-3UTR TCA 90 bp CACAGCAAGGGAACAGTGAGTCAAAGCAAGATGAACACTCGCAGAGAAAACATGACCTTAGCCTTTTTCTaGGCTCTTCTTTGCTTGCTA +
Preference number: 4 (lower is better)
Translates to: HSKGTVSQSKMNTRRENMTLAFF*ALLCLL
Trigger: TAGCAAGCAAAGAAGAGCTCAGAAAAAGGCTAAGGT...CATGTTTTCTCTGCGAGTGTTCATCTTGCTTTGACTCACTGTTCCCTTGCTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
CDS-3UTR CCA 90 bp GGTTATCTCAAGAAAATGCTGACTACGACGCCTGTGGGTTTATACTGCGTCAGCCATAAGCTATTTTGTTaGGAGGAACTTGCTGCGTTT +
Preference number: 4 (lower is better)
Translates to: GYLKKMLTTTPVGLYCVSHKLFC*EELAAF
Trigger: AAACGCAGCAAGTTCCTCCCAACAAAATAGCTTATG...GCTGACGCAGTATAAACCCACAGGCGTCGTAGTCAGCATTTTCTTGAGATAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163486.2
CDS-3UTR CCA 90 bp CTCTTTAAGATGCTGGCAAAACACTCCTCCTTCAAACCAAAGGTCTCTGAGCCAAGTAGTGAACAGAGGTaGACACCCTTTGCTAAAGTT +
Preference number: 4 (lower is better)
Translates to: LFKMLAKHSSFKPKVSEPSSEQR*TPFAKV
Trigger: AACTTTAGCAAAGGGTGTCCACCTCTGTTCACTACT...TGGCTCAGAGACCTTTGGTTTGAAGGAGGAGTGTTTTGCCAGCATCTTAAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
CDS-3UTR CCA 90 bp CTAATCTCAAGAGGCCAACATAAGCACGGAGGGTCATCTTTCTCATGCAGTATGAGTAGTGAACAGAGGTaGACACCCTTTGCTAAAGTT +
Preference number: 4 (lower is better)
Translates to: LISRGQHKHGGSSFSCSMSSEQR*TPFAKV
Trigger: AACTTTAGCAAAGGGTGTCCACCTCTGTTCACTACT...CATACTGCATGAGAAAGATGACCCTCCGTGCTTATGTTGGCCTCTTGAGATTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163486.2
CDS-3UTR CCA 90 bp CTCTTTAAGATGCTGGCAAAACACTCCTCCTTCAAACCAAAGGTCTCTGAGCCATGTGCCAGGAAATACTaGACCCAGATTAGAGTTGTT +
Preference number: 4 (lower is better)
Translates to: LFKMLAKHSSFKPKVSEPCARKY*TQIRVV
Trigger: AACAACTCTAATCTGGGTCCAGTATTTCCTGGCACA...TGGCTCAGAGACCTTTGGTTTGAAGGAGGAGTGTTTTGCCAGCATCTTAAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR CAA 72 bp AGACAACTTCTAGGACACACAGCTATCTTGCAAGGTTaGAAAAAGGTGTCCCTTTTGGTGGAGGAACTGCAA +
Preference number: 4 (lower is better)
Translates to: RQLLGHTAILQG*KKVSLLVEELQ
Trigger: TTGCAGTTCCTCCACCAAAAGGGACACCTTTTTCAAACCTTGCAAGATAGCTGTGTGTCCTAGAAGTTGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR CAA 72 bp CTAGAAAGGAGACAACTTCTAGGACACACAGCTATCTaGCAAGGTTTGAAAAAGGTGTCCCTTTTGGTGGAG +
Preference number: 4 (lower is better)
Translates to: LERRQLLGHTAI*QGLKKVSLLVE
Trigger: CTCCACCAAAAGGGACACCTTTTTCAAACCTTGCAAGATAGCTGTGTGTCCTAGAAGTTGTCTCCTTTCTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR CAA 72 bp GTAAACAGACTTGTACTTAGTAAAAGCTTCGTGGAATaGTTCATCTCTACAGAGGGCAGCCACCAGCAACCT +
Preference number: 4 (lower is better)
Translates to: VNRLVLSKSFVE*FISTEGSHQQP
Trigger: AGGTTGCTGGTGGCTGCCCTCTGTAGAGATGAACAATTCCACGAAGCTTTTACTAAGTACAAGTCTGTTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
CDS-3UTR TCA 90 bp CATAGCACGCAATCCACAGCTCTCATTTCATACTGCAAATTCCATAATTTAGGATGGGGTGCTGCTTGCTaGCTTCCTCATAAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: HSTQSTALISYCKFHNLGWGAAC*LPHKAE
Trigger: TTCAGCTTTATGAGGAAGTCAGCAAGCAGCACCCCA...TCCTAAATTATGGAATTTGCAGTATGAAATGAGAGCTGTGGATTGCGTGCTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
CDS-3UTR TCA 90 bp TTTCTTTGGCTGACAGGTTTTCTGAATCTATGTCTTGTTGTTTGCTGTCATTGGTGGGGTGCTGCTTGCTaGCTTCCTCATAAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: FLWLTGFLNLCLVVCCHWWGAAC*LPHKAE
Trigger: TTCAGCTTTATGAGGAAGTCAGCAAGCAGCACCCCA...CCAATGACAGCAAACAACAAGACATAGATTCAGAAAACCTGTCAGCCAAAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163486.2
3UTR CAA 72 bp ACCAGCATCCTGTTGGCATTAAGAGGAATGACTTACTaGCCAGGACAGATAGTCCATGACCAATATCCTTTT +
Preference number: 4 (lower is better)
Translates to: TSILLALRGMTY*PGQIVHDQYPF
Trigger: AAAAGGATATTGGTCATGGACTATCTGTCCTGGCAAGTAAGTCATTCCTCTTAATGCCAACAGGATGCTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR CAA 72 bp CCCCGAGTCTCTCTGCTTCTTTGTCTCGGTCCTTGTTaGTCTCTCACACACATAAATAAAAATCGTAAGGTA +
Preference number: 4 (lower is better)
Translates to: PRVSLLLCLGPC*SLTHINKNRKV
Trigger: TACCTTACGATTTTTATTTATGTGTGTGAGAGACAAACAAGGACCGAGACAAAGAAGCAGAGAGACTCGGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
CDS-3UTR TCA 90 bp CACAGCAAGGGAACAGTGAGTCAAAGCAAGATGAACACTCGCAGAGAAAACATGTGTTCCAAAGATTCCTaGAATAAATTTGCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: HSKGTVSQSKMNTRRENMCSKDS*NKFASL
Trigger: GAGAGAGGCAAATTTATTTCAGGAATCTTTGGAACA...CATGTTTTCTCTGCGAGTGTTCATCTTGCTTTGACTCACTGTTCCCTTGCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
CDS-3UTR TCA 90 bp ATTTACTCATTCAACAAGCATTTTCACACTACATATAGGGACGTACCAGGAGTGCCTGCAAGTAGATGCTaGAGAGAGGTAGCATTGTGT +
Preference number: 4 (lower is better)
Translates to: IYSFNKHFHTTYRDVPGVPASRC*REVALC
Trigger: ACACAATGCTACCTCTCTTCAGCATCTACTTGCAGG...CACTCCTGGTACGTCCCTATATGTAGTGTGAAAATGCTTGTTGAATGAGTAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
CDS-3UTR GCA 90 bp CACAGCAAGGGAACAGTGAGTCAAAGCAAGATGAACACTCGCAGAGAAAACATGTCAAACCACATACACTaGATTTCATTCAGATTCTCC +
Preference number: 4 (lower is better)
Translates to: HSKGTVSQSKMNTRRENMSNHIH*ISFRFS
Trigger: GGAGAATCTGAATGAAATGCAGTGTATGTGGTTTGA...CATGTTTTCTCTGCGAGTGTTCATCTTGCTTTGACTCACTGTTCCCTTGCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
CDS-3UTR CCA 90 bp GTTTTCAGAGGAGTGAGGAACTTGATGGCTTCTTCTAATGGATTGTCAACCCTTTGTGCCAGGAAATACTaGACCCAGATTAGAGTTGTT +
Preference number: 4 (lower is better)
Translates to: VFRGVRNLMASSNGLSTLCARKY*TQIRVV
Trigger: AACAACTCTAATCTGGGTCCAGTATTTCCTGGCACA...AAGGGTTGACAATCCATTAGAAGAAGCCATCAAGTTCCTCACTCCTCTGAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163486.2
CDS-3UTR GCA 90 bp ATATTCTATAAGAAACAAGTTAGTAGTCGGGTGTGGTGGCGCACGCCTTTAATCTTGGGAGGAACTTGCTaGGTTTGTCTAAATTCTTCT +
Preference number: 4 (lower is better)
Translates to: IFYKKQVSSRVWWRTPLILGGTC*VCLNSS
Trigger: AGAAGAATTTAGACAAACGCAGCAAGTTCCTCCCAA...GATTAAAGGCGTGCGCCACCACACCCGACTACTAACTTGTTTCTTATAGAATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
CDS-3UTR GCA 90 bp ATATTCTATAAGAAACAAGTTAGTAGTCGGGTGTGGTGGCGCACGCCTTTAATCCTTGAGCTAGAACTTTaGTCACAATGTCTGGAAGAT +
Preference number: 4 (lower is better)
Translates to: IFYKKQVSSRVWWRTPLILELEL*SQCLED
Trigger: ATCTTCCAGACATTGTGAGCAAAGTTCTAGCTCAAG...GATTAAAGGCGTGCGCCACCACACCCGACTACTAACTTGTTTCTTATAGAATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
CDS-3UTR TCA 90 bp CATAGCACGCAATCCACAGCTCTCATTTCATACTGCAAATTCCATAATTTAGGATCAAGGTCTCTCATCTaGATCTGCAATAGAGAGAGA +
Preference number: 4 (lower is better)
Translates to: HSTQSTALISYCKFHNLGSRSLI*ICNRER
Trigger: TCTCTCTCTATTGCAGATTCAGATGAGAGACCTTGA...TCCTAAATTATGGAATTTGCAGTATGAAATGAGAGCTGTGGATTGCGTGCTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
CDS-3UTR GCA 90 bp ATATTCTATAAGAAACAAGTTAGTAGTCGGGTGTGGTGGCGCACGCCTTTAATCCTATGTCTTGTTGTTTaGTGTCATTGGTTAAAGGGT +
Preference number: 4 (lower is better)
Translates to: IFYKKQVSSRVWWRTPLILCLVV*CHWLKG
Trigger: ACCCTTTAACCAATGACAGCAAACAACAAGACATAG...GATTAAAGGCGTGCGCCACCACACCCGACTACTAACTTGTTTCTTATAGAATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
CDS-3UTR GCA 90 bp ATATTCTATAAGAAACAAGTTAGTAGTCGGGTGTGGTGGCGCACGCCTTTAATCGCTCGTTTAACAGACTaGAACATTAGCAAAAACTTC +
Preference number: 4 (lower is better)
Translates to: IFYKKQVSSRVWWRTPLIARLTD*NISKNF
Trigger: GAAGTTTTTGCTAATGTTGCAGTCTGTTAAACGAGC...GATTAAAGGCGTGCGCCACCACACCCGACTACTAACTTGTTTCTTATAGAATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
CDS-3UTR GCA 90 bp ATTTACTCATTCAACAAGCATTTTCACACTACATATAGGGACGTACCAGGAGTGAGAACGAAGTTGCAATaGCTTTTCCAAGCCTTCATA +
Preference number: 4 (lower is better)
Translates to: IYSFNKHFHTTYRDVPGVRTKLQ*LFQAFI
Trigger: TATGAAGGCTTGGAAAAGGCATTGCAACTTCGTTCT...CACTCCTGGTACGTCCCTATATGTAGTGTGAAAATGCTTGTTGAATGAGTAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR CAA 72 bp AGAGGAGTGAGGAACTTGATGGCTTCTTCTAATGGATaGTCAACCCTTTCTAGTTTTTCAGGAATAAGTTCT +
Preference number: 4 (lower is better)
Translates to: RGVRNLMASSNG*STLSSFSGISS
Trigger: AGAACTTATTCCTGAAAAACTAGAAAGGGTTGACAATCCATTAGAAGAAGCCATCAAGTTCCTCACTCCTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000163486.2
3UTR CAA 72 bp AAAATACACAAATGTTTGTTGACAGAGTGTTCTGGGTaGAGTGTTAAGAAACAAACCAATCCGTCTTACCCT +
Preference number: 4 (lower is better)
Translates to: KIHKCLLTECSG*SVKKQTNPSYP
Trigger: AGGGTAAGACGGATTGGTTTGTTTCTTAACACTCAACCCAGAACACTCTGTCAACAAACATTTGTGTATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR CAA 72 bp CTGGTCTTTGTTAGGGGAAAAATACACAAATGTTTGTaGACAGAGTGTTCTGGGTTGAGTGTTAAGAAACAA +
Preference number: 4 (lower is better)
Translates to: LVFVRGKIHKCL*TECSGLSVKKQ
Trigger: TTGTTTCTTAACACTCAACCCAGAACACTCTGTCAACAAACATTTGTGTATTTTTCCCCTAACAAAGACCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
CDS-3UTR TCA 90 bp AACTTGATGGCTTCTTCTAATGGATTGTCAACCCTTTCTAGTTTTTCAGGAATATGTTCCAAAGATTCCTaGAATAAATTTGCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: NLMASSNGLSTLSSFSGICSKDS*NKFASL
Trigger: GAGAGAGGCAAATTTATTTCAGGAATCTTTGGAACA...TATTCCTGAAAAACTAGAAAGGGTTGACAATCCATTAGAAGAAGCCATCAAGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000163486.2
3UTR CAA 72 bp TTGACTTCGGAACTTTTCTTCTTGGGTTGCCACAGGTaGTACAATCAAATTTGTCCTTCTCTATTTATTTTG +
Preference number: 4 (lower is better)
Translates to: LTSELFFLGCHR*YNQICPSLFIL
Trigger: CAAAATAAATAGAGAAGGACAAATTTGATTGTACAACCTGTGGCAACCCAAGAAGAAAAGTTCCGAAGTCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR CAA 72 bp ATCCTATTTACTGTGGCACCAAAGCATATCTGGAAGTaGGTTATTGACAGTCACATTTTCTATAAACTTGAA +
Preference number: 4 (lower is better)
Translates to: ILFTVAPKHIWK*VIDSHIFYKLE
Trigger: TTCAAGTTTATAGAAAATGTGACTGTCAATAACCAACTTCCAGATATGCTTTGGTGCCACAGTAAATAGGAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
3UTR CAA 72 bp ACTTCAAGTCCCTATGGTCTTAATAAGGTCTCAGTATaGCTCAAAAGTCTAAAATACCTTCTGACATTCAAA +
Preference number: 4 (lower is better)
Translates to: TSSPYGLNKVSV*LKSLKYLLTFK
Trigger: TTTGAATGTCAGAAGGTATTTTAGACTTTTGAGCAATACTGAGACCTTATTAAGACCATAGGGACTTGAAGT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
CDS-3UTR CAA 90 bp AGAGCCCCCAGCTCTTCCTATCCTTCACTCATCTCCACGACTCATCCCACGAGTCCCAGATTAGAGTTGTaGGGGGTTCCTTCTCCCCGT +
Preference number: 5 (lower is better)
Translates to: RAPSSSYPSLISTTHPTSPRLEL*GVPSPR
Trigger: ACGGGGAGAAGGAACCCCCAACAACTCTAATCTGGG...ACTCGTGGGATGAGTCGTGGAGATGAGTGAAGGATAGGAAGAGCTGGGGGCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
CDS-3UTR CAA 90 bp GAAGAGCTGAGGAAAGGACTGAAGGCCCTGAAGGGGGTAGGAACTCCCCAGCATGCGCAACTGAAGAAGTaGGTATCTCGTCTCTCGATA +
Preference number: 5 (lower is better)
Translates to: EELRKGLKALKGVGTPQHAQLKK*VSRLSI
Trigger: TATCGAGAGACGAGATACCAACTTCTTCAGTTGCGC...ATGCTGGGGAGTTCCTACCCCCTTCAGGGCCTTCAGTCCTTTCCTCAGCTCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
CDS TCA 90 bp GCGATGGCATATCCAATCCAGGAAGCACGCTGTGTTGGGCGCAACTaGAGAAGTTGGTATCTCGTCTCCTCCATGTTCAGCAAACTTCGG +
Preference number: 5 (lower is better)
Translates to: AMAYPIQEARCVGRN*RSWYLVSSMFSKLR
Trigger: CCGAAGTTTGCTGAACATGGAGGAGACGAGATACCAACTTCTTCAGTTGCGCCCAACACAGCGTGCTTCCTGGATTGGATATGCCATCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169500.2
CDS-3UTR CAA 90 bp AGAGCCCCCAGCTCTTCCTATCCTTCACTCATCTCCACGACTCATCCCACGAGTCACTGTGCGGCTTCTTaGAGATTACCCATATGCTTG +
Preference number: 5 (lower is better)
Translates to: RAPSSSYPSLISTTHPTSHCAAS*RLPICL
Trigger: CAAGCATATGGGTAATCTCAAAGAAGCCGCACAGTG...ACTCGTGGGATGAGTCGTGGAGATGAGTGAAGGATAGGAAGAGCTGGGGGCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
CDS-3UTR CAA 90 bp ACGCCTTTAATCCAGCACTCGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGTTGGCACATTTGGAATaGATGAACCTGTCAGCCGTG +
Preference number: 5 (lower is better)
Translates to: TPLIQHSGGRGRWISEFELAHLE*MNLSAV
Trigger: CACGGCTGACAGGTTCATCAATTCCAAATGTGCCAA...CTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCGAGTGCTGGATTAAAGGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
CDS-3UTR CAA 90 bp GAAGAGCTGAGGAAAGGACTGAAGGCCCTGAAGGGGGTAGGAACTCCCCAGCATAGAGGAGTGAGGAACTaGATGGCTTCTTCTAATGGA +
Preference number: 5 (lower is better)
Translates to: EELRKGLKALKGVGTPQHRGVRN*MASSNG
Trigger: TCCATTAGAAGAAGCCATCAAGTTCCTCACTCCTCT...ATGCTGGGGAGTTCCTACCCCCTTCAGGGCCTTCAGTCCTTTCCTCAGCTCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
CDS-3UTR CAA 90 bp GAAGAGCTGAGGAAAGGACTGAAGGCCCTGAAGGGGGTAGGAACTCCCCAGCATTCATTCATTAAGAGCTaGTGGTCAGCTGTGTGGTTC +
Preference number: 5 (lower is better)
Translates to: EELRKGLKALKGVGTPQHSFIKS*WSAVWF
Trigger: GAACCACACAGCTGACCACAAGCTCTTAATGAATGA...ATGCTGGGGAGTTCCTACCCCCTTCAGGGCCTTCAGTCCTTTCCTCAGCTCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
CDS-3UTR CAA 90 bp AAAATGCTGACTACGACGCCTGTGGGTTTATACTGCGTCAGCAGGGGAAGAGTGTTGGCACATTTGGAATaGATGAACCTGTCAGCCGTG +
Preference number: 5 (lower is better)
Translates to: KMLTTTPVGLYCVSRGRVLAHLE*MNLSAV
Trigger: CACGGCTGACAGGTTCATCAATTCCAAATGTGCCAA...CACTCTTCCCCTGCTGACGCAGTATAAACCCACAGGCGTCGTAGTCAGCATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163486.2
CDS CCA 90 bp CAAATGATAAGCGATGGCATATCCAATCCAGGAAGCACGCTGTGTTaGGCGCAACTGAAGAAGTTGGTATCTCGTCTCCTCCATGTTCAG +
Preference number: 5 (lower is better)
Translates to: QMISDGISNPGSTLC*AQLKKLVSRLLHVQ
Trigger: CTGAACATGGAGGAGACGAGATACCAACTTCTTCAGTTGCGCCCAACACAGCGTGCTTCCTGGATTGGATATGCCATCGCTTATCATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169500.2
CDS-3UTR CAA 90 bp AGAGCCCCCAGCTCTTCCTATCCTTCACTCATCTCCACGACTCATCCCACGAGTATCATCTTGCAAAACTaGAGGCCATTTTTGTACTGC +
Preference number: 5 (lower is better)
Translates to: RAPSSSYPSLISTTHPTSIILQN*RPFLYC
Trigger: GCAGTACAAAAATGGCCTCAAGTTTTGCAAGATGAT...ACTCGTGGGATGAGTCGTGGAGATGAGTGAAGGATAGGAAGAGCTGGGGGCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
CDS-3UTR CAA 90 bp CTAATCTCAAGAGGCCAACATAAGCACGGAGGGTCATCTTTCTCATGCAGTATGAGGAAGCACGCTGTGTaGGGCGCAACTGAAGAAGTT +
Preference number: 5 (lower is better)
Translates to: LISRGQHKHGGSSFSCSMRKHAV*GATEEV
Trigger: AACTTCTTCAGTTGCGCCCAACACAGCGTGCTTCCT...CATACTGCATGAGAAAGATGACCCTCCGTGCTTATGTTGGCCTCTTGAGATTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163486.2
CDS CCA 90 bp CAAATGATAAGCGATGGCATATCCAATCCAGGAAGCACGCTGTGTTaGGCGCAACTGAAGAAGTTGGTATCTCGTCTCTCGATAACCTTC +
Preference number: 5 (lower is better)
Translates to: QMISDGISNPGSTLC*AQLKKLVSRLSITF
Trigger: GAAGGTTATCGAGAGACGAGATACCAACTTCTTCAGTTGCGCCCAACACAGCGTGCTTCCTGGATTGGATATGCCATCGCTTATCATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022597.15
ENSMUST00000163486.2
CDS-3UTR CAA 90 bp ACGCCTTTAATCCAGCACTCGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGATGTATTTGGCACATTaGGAATTGATGAACCTGTCA +
Preference number: 5 (lower is better)
Translates to: TPLIQHSGGRGRWISEFEMYLAH*ELMNLS
Trigger: TGACAGGTTCATCAATTCCAAATGTGCCAAATACAT...CTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCGAGTGCTGGATTAAAGGCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
CDS-3UTR CAA 90 bp AGCACCAAACATCTTTCTGGCATCTCCAGCATCCTAGAATCACCTGCTCAGGGACCTATACTCTTCATATaGGGAGCTACAGTTCCCAAA +
Preference number: 5 (lower is better)
Translates to: STKHLSGISSILESPAQGPILFI*GATVPK
Trigger: TTTGGGAACTGTAGCTCCCAATATGAAGAGTATAGG...TCCCTGAGCAGGTGATTCTAGGATGCTGGAGATGCCAGAAAGATGTTTGGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
CDS-3UTR CAA 90 bp TTTCTTTGGCTGACAGGTTTTCTGAATCTATGTCTTGTTGTTTGCTGTCATTGGCCCAGATTAGAGTTGTaGGGGGTTCCTTCTCCCCGT +
Preference number: 5 (lower is better)
Translates to: FLWLTGFLNLCLVVCCHWPRLEL*GVPSPR
Trigger: ACGGGGAGAAGGAACCCCCAACAACTCTAATCTGGG...CCAATGACAGCAAACAACAAGACATAGATTCAGAAAACCTGTCAGCCAAAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000163486.2
CDS CCA 90 bp ATAGCTTTAGCGCTGTATCATAATCTTTCAGCAAATGATAAGCGATaGCATATCCAATCCAGGAAGCACGCTGTGTTGGGCGCAACTGAA +
Preference number: 5 (lower is better)
Translates to: IALALYHNLSANDKR*HIQSRKHAVLGATE
Trigger: TTCAGTTGCGCCCAACACAGCGTGCTTCCTGGATTGGATATGCCATCGCTTATCATTTGCTGAAAGATTATGATACAGCGCTAAAGCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022597.15
ENSMUST00000163486.2
CDS-3UTR CAA 90 bp ATATTCTATAAGAAACAAGTTAGTAGTCGGGTGTGGTGGCGCACGCCTTTAATCCTTCTTATCAGAACGTaGCAGGAGGCCGTATACATG +
Preference number: 5 (lower is better)
Translates to: IFYKKQVSSRVWWRTPLILLIRT*QEAVYM
Trigger: CATGTATACGGCCTCCTGCAACGTTCTGATAAGAAG...GATTAAAGGCGTGCGCCACCACACCCGACTACTAACTTGTTTCTTATAGAATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
CDS-3UTR CAA 90 bp ATTTACTCATTCAACAAGCATTTTCACACTACATATAGGGACGTACCAGGAGTGAGGAAGCACGCTGTGTaGGGCGCAACTGAAGAAGTT +
Preference number: 5 (lower is better)
Translates to: IYSFNKHFHTTYRDVPGVRKHAV*GATEEV
Trigger: AACTTCTTCAGTTGCGCCCAACACAGCGTGCTTCCT...CACTCCTGGTACGTCCCTATATGTAGTGTGAAAATGCTTGTTGAATGAGTAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
CDS-3UTR CAA 90 bp AAGTTTCTGAATACTTCACTGGCTTCTTTTAGTCTTCCCAATTTCAACAGCATTAGGAAGCACGCTGTGTaGGGCGCAACTGAAGAAGTT +
Preference number: 5 (lower is better)
Translates to: KFLNTSLASFSLPNFNSIRKHAV*GATEEV
Trigger: AACTTCTTCAGTTGCGCCCAACACAGCGTGCTTCCT...AATGCTGTTGAAATTGGGAAGACTAAAAGAAGCCAGTGAAGTATTCAGAAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169500.2
CDS-3UTR CAA 90 bp CTCTTTAAGATGCTGGCAAAACACTCCTCCTTCAAACCAAAGGTCTCTGAGCCACAAGTTCCTGGATTATaGAAACCTTTTCTGTATCAC +
Preference number: 5 (lower is better)
Translates to: LFKMLAKHSSFKPKVSEPQVPGL*KPFLYH
Trigger: GTGATACAGAAAAGGTTTCAATAATCCAGGAACTTG...TGGCTCAGAGACCTTTGGTTTGAAGGAGGAGTGTTTTGCCAGCATCTTAAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
CDS-3UTR CAA 90 bp CACAGCAAGGGAACAGTGAGTCAAAGCAAGATGAACACTCGCAGAGAAAACATGTGTTGTTTGCTGTCATaGGTTAAAGGGTTATCATGT +
Preference number: 5 (lower is better)
Translates to: HSKGTVSQSKMNTRRENMCCLLS*VKGLSC
Trigger: ACATGATAACCCTTTAACCAATGACAGCAAACAACA...CATGTTTTCTCTGCGAGTGTTCATCTTGCTTTGACTCACTGTTCCCTTGCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
CDS-3UTR CAA 90 bp GGAAGTCAAACTGATCATCGGTTATCTCAAGAAAATGCTGACTACGACGCCTGTATGTATTTGGCACATTaGGAATTGATGAACCTGTCA +
Preference number: 5 (lower is better)
Translates to: GSQTDHRLSQENADYDACMYLAH*ELMNLS
Trigger: TGACAGGTTCATCAATTCCAAATGTGCCAAATACAT...ACAGGCGTCGTAGTCAGCATTTTCTTGAGATAACCGATGATCAGTTTGACTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163486.2
CDS-3UTR CAA 90 bp AAGTTTCTGAATACTTCACTGGCTTCTTTTAGTCTTCCCAATTTCAACAGCATTGCGCAACTGAAGAAGTaGGTATCTCGTCTCCTCCAT +
Preference number: 5 (lower is better)
Translates to: KFLNTSLASFSLPNFNSIAQLKK*VSRLLH
Trigger: ATGGAGGAGACGAGATACCAACTTCTTCAGTTGCGC...AATGCTGTTGAAATTGGGAAGACTAAAAGAAGCCAGTGAAGTATTCAGAAACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169500.2
CDS-3UTR CAA 90 bp AGGAATAAGTTCTTCCTTATGACCACTGGTAACTTCTTCTTCTTCTTCTCTTTTCTTCTTATCAGAACGTaGCAGGAGGCCGTATACATG +
Preference number: 5 (lower is better)
Translates to: RNKFFLMTTGNFFFFFSFLLIRT*QEAVYM
Trigger: CATGTATACGGCCTCCTGCAACGTTCTGATAAGAAG...AAAAGAGAAGAAGAAGAAGAAGTTACCAGTGGTCATAAGGAAGAACTTATTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163486.2
CDS-3UTR CAA 90 bp TTCAGAGGAGTGAGGAACTTGATGGCTTCTTCTAATGGATTGTCAACCCTTTCTCAAGTTCCTGGATTATaGAAACCTTTTCTGTATCAC +
Preference number: 5 (lower is better)
Translates to: FRGVRNLMASSNGLSTLSQVPGL*KPFLYH
Trigger: GTGATACAGAAAAGGTTTCAATAATCCAGGAACTTG...AGAAAGGGTTGACAATCCATTAGAAGAAGCCATCAAGTTCCTCACTCCTCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163486.2
CDS-3UTR CAA 90 bp AGGAATAAGTTCTTCCTTATGACCACTGGTAACTTCTTCTTCTTCTTCTCTTTTCACTGTGCGGCTTCTTaGAGATTACCCATATGCTTG +
Preference number: 5 (lower is better)
Translates to: RNKFFLMTTGNFFFFFSFHCAAS*RLPICL
Trigger: CAAGCATATGGGTAATCTCAAAGAAGCCGCACAGTG...AAAAGAGAAGAAGAAGAAGAAGTTACCAGTGGTCATAAGGAAGAACTTATTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163486.2
CDS-3UTR CAA 90 bp TCCCAATTTCAACAGCATTTCCCCCTTAATTTCTTCCACCAAAAGTTTATCACAATCATCTTGCAAAACTaGAGGCCATTTTTGTACTGC +
Preference number: 5 (lower is better)
Translates to: SQFQQHFPLNFFHQKFITIILQN*RPFLYC
Trigger: GCAGTACAAAAATGGCCTCAAGTTTTGCAAGATGAT...TGTGATAAACTTTTGGTGGAAGAAATTAAGGGGGAAATGCTGTTGAAATTGGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000169500.2
CDS CCA 72 bp AGCGATGGCATATCCAATCCAGGAAGCACGCTGTGTTaGGCGCAACTGAAGAAGTTGGTATCTCGTCTCTCG +
Preference number: 6 (lower is better)
Translates to: SDGISNPGSTLC*AQLKKLVSRLS
Trigger: CGAGAGACGAGATACCAACTTCTTCAGTTGCGCCCAACACAGCGTGCTTCCTGGATTGGATATGCCATCGCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022597.15
ENSMUST00000163486.2
CDS CCA 72 bp GCAGGCAGGAAAGCAGGTGTGAGTGGGAGCAGGCTATaGCAGGTCTTCCTATACTCTTCATATTGGGAGCTA +
Preference number: 6 (lower is better)
Translates to: AGRKAGVSGSRL*QVFLYSSYWEL
Trigger: TAGCTCCCAATATGAAGAGTATAGGAAGACCTGCCATAGCCTGCTCCCACTCACACCTGCTTTCCTGCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022597.15
CDS CCA 72 bp AGCGATGGCATATCCAATCCAGGAAGCACGCTGTGTTaGGCGCAACTGAAGAAGTTGGTATCTCGTCTCCTC +
Preference number: 6 (lower is better)
Translates to: SDGISNPGSTLC*AQLKKLVSRLL
Trigger: GAGGAGACGAGATACCAACTTCTTCAGTTGCGCCCAACACAGCGTGCTTCCTGGATTGGATATGCCATCGCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169500.2
CDS CAA 72 bp CCAGGAAGCACGCTGTGTTGGGCGCAACTGAAGAAGTaGGTATCTCGTCTCCTCCATGTTCAGCAAACTTCG +
Preference number: 6 (lower is better)
Translates to: PGSTLCWAQLKK*VSRLLHVQQTS
Trigger: CGAAGTTTGCTGAACATGGAGGAGACGAGATACCAACTTCTTCAGTTGCGCCCAACACAGCGTGCTTCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169500.2
CDS TCA 72 bp TATCCAATCCAGGAAGCACGCTGTGTTGGGCGCAACTaGAGAAGTTGGTATCTCGTCTCCTCCATGTTCAGC +
Preference number: 6 (lower is better)
Translates to: YPIQEARCVGRN*RSWYLVSSMFS
Trigger: GCTGAACATGGAGGAGACGAGATACCAACTTCTTCAGTTGCGCCCAACACAGCGTGCTTCCTGGATTGGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169500.2
CDS CAA 72 bp CCAGGAAGCACGCTGTGTTGGGCGCAACTGAAGAAGTaGGTATCTCGTCTCTCGATAACCTTCAAGGTCTCT +
Preference number: 6 (lower is better)
Translates to: PGSTLCWAQLKK*VSRLSITFKVS
Trigger: AGAGACCTTGAAGGTTATCGAGAGACGAGATACCAACTTCTTCAGTTGCGCCCAACACAGCGTGCTTCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022597.15
ENSMUST00000163486.2
CDS CAA 72 bp AAGCGATGGCATATCCAATCCAGGAAGCACGCTGTGTaGGGCGCAACTGAAGAAGTTGGTATCTCGTCTCTC +
Preference number: 6 (lower is better)
Translates to: KRWHIQSRKHAV*GATEEVGISSL
Trigger: GAGAGACGAGATACCAACTTCTTCAGTTGCGCCCAACACAGCGTGCTTCCTGGATTGGATATGCCATCGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022597.15
ENSMUST00000163486.2
CDS CAA 72 bp AAGCGATGGCATATCCAATCCAGGAAGCACGCTGTGTaGGGCGCAACTGAAGAAGTTGGTATCTCGTCTCCT +
Preference number: 6 (lower is better)
Translates to: KRWHIQSRKHAV*GATEEVGISSP
Trigger: AGGAGACGAGATACCAACTTCTTCAGTTGCGCCCAACACAGCGTGCTTCCTGGATTGGATATGCCATCGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169500.2
CDS CAA 90 bp GCAAATGATAAGCGATGGCATATCCAATCCAGGAAGCACGCTGTGTaGGGCGCAACTGAAGAAGTTGGTATCTCGTCTCCTCCATGTTCA +
Preference number: 6 (lower is better)
Translates to: ANDKRWHIQSRKHAV*GATEEVGISSPPCS
Trigger: TGAACATGGAGGAGACGAGATACCAACTTCTTCAGTTGCGCCCAACACAGCGTGCTTCCTGGATTGGATATGCCATCGCTTATCATTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169500.2
CDS TCA 72 bp GCAGGAGGCCGTATACATGCCAACAGACATGACTCCTaGCGTCACTGCGAAGTCCTTTACGAACAAATTCAT +
Preference number: 6 (lower is better)
Translates to: AGGRIHANRHDS*RHCEVLYEQIH
Trigger: ATGAATTTGTTCGTAAAGGACTTCGCAGTGACGTCAGGAGTCATGTCTGTTGGCATGTATACGGCCTCCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022597.15
ENSMUST00000163486.2
CDS CAA 90 bp GCAAATGATAAGCGATGGCATATCCAATCCAGGAAGCACGCTGTGTaGGGCGCAACTGAAGAAGTTGGTATCTCGTCTCTCGATAACCTT +
Preference number: 6 (lower is better)
Translates to: ANDKRWHIQSRKHAV*GATEEVGISSLDNL
Trigger: AAGGTTATCGAGAGACGAGATACCAACTTCTTCAGTTGCGCCCAACACAGCGTGCTTCCTGGATTGGATATGCCATCGCTTATCATTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022597.15
ENSMUST00000163486.2