Pregenerated sensors for NAA12 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024571Ensembl transcript IDs: ENSMUST00000025463.14, ENSMUST00000125127.8, ENSMUST00000127234.8, ENSMUST00000153363.3, ENSMUST00000156400.9
Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CGGACCCTAGGGTCTGCAAGCTGTCTTGGACATCAGTGCTGTCTTTaGCATCACTACCACTGTCACCTCCGGCCAGGTTCTCCTGCTGAC | + |
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Preference number: 5 (lower is better) Translates to: RTLGSASCLGHQCCL*HHYHCHLRPGSPAD Trigger: GTCAGCAGGAGAACCTGGCCGGAGGTGACAGTGGTAGTGATGGCAAAGACAGCACTGATGTCCAAGACAGCTTGCAGACCCTAGGGTCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000025463.14 ENSMUST00000125127.8 ENSMUST00000127234.8 ENSMUST00000153363.3 ENSMUST00000156400.9 |
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| CDS GCA 90 bp | TCCTTGGAGCCCAGAACCACATATCTGCCTTTCTTCAGCACCAGCTaGCGTCTCAGCTCATCGGCCATCTGCGAGAGATCTCGCTTCATA | + |
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Preference number: 5 (lower is better) Translates to: SLEPRTTYLPFFSTS*RLSSSAICERSRFI Trigger: TATGAAGCGAGATCTCTCGCAGATGGCCGATGAGCTGAGACGGCAGCTGGTGCTGAAGAAAGGCAGATATGTGGTTCTGGGCTCCAAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000025463.14 ENSMUST00000125127.8 ENSMUST00000127234.8 ENSMUST00000153363.3 ENSMUST00000156400.9 |
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| CDS GCA 90 bp | GAAGTGTGCTACCCTGATTCTCCTTGGAGCCCAGAACCACATATCTaGCTTTCTTCAGCACCAGCTGCCGTCTCAGCTCATCGGCCATCT | + |
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Preference number: 5 (lower is better) Translates to: EVCYPDSPWSPEPHI*LSSAPAAVSAHRPS Trigger: AGATGGCCGATGAGCTGAGACGGCAGCTGGTGCTGAAGAAAGGCAGATATGTGGTTCTGGGCTCCAAGGAGAATCAGGGTAGCACACTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000025463.14 ENSMUST00000125127.8 ENSMUST00000127234.8 ENSMUST00000153363.3 ENSMUST00000156400.9 |
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| CDS CCA 90 bp | GACTGGCCTCTTCAGAACCAGGAAGTGTGCTACCCTGATTCTCCTTaGAGCCCAGAACCACATATCTGCCTTTCTTCAGCACCAGCTGCC | + |
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Preference number: 5 (lower is better) Translates to: DWPLQNQEVCYPDSP*SPEPHICLSSAPAA Trigger: GGCAGCTGGTGCTGAAGAAAGGCAGATATGTGGTTCTGGGCTCCAAGGAGAATCAGGGTAGCACACTTCCTGGTTCTGAAGAGGCCAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000025463.14 ENSMUST00000125127.8 ENSMUST00000127234.8 ENSMUST00000153363.3 ENSMUST00000156400.9 |
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| CDS TCA 72 bp | TGGGAGCGTTTCACAGCCAGCGAGGTGATGTGTCCGTaGGGGACATCATCGGGGTCCTCCTCCATCTTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: WERFTASEVMCP*GTSSGSSSILA Trigger: GGCCAAGATGGAGGAGGACCCCGATGATGTCCCTCACGGACACATCACCTCGCTGGCTGTGAAACGCTCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000025463.14 ENSMUST00000125127.8 ENSMUST00000127234.8 ENSMUST00000153363.3 ENSMUST00000156400.9 |
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| CDS CAA 72 bp | TTGGGCTCCACCTCGCTAACCTGGAAGTTCAGGGTGTaGGAATACAGGTGCAGAGCCGCCCGGTTGCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: LGSTSLTWKFRV*EYRCRAARLLF Trigger: GAAGAGCAACCGGGCGGCTCTGCACCTGTATTCCAACACCCTGAACTTCCAGGTTAGCGAGGTGGAGCCCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000025463.14 ENSMUST00000125127.8 ENSMUST00000127234.8 ENSMUST00000153363.3 ENSMUST00000156400.9 |
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| CDS GCA 72 bp | TTCAGCACCAGCTGCCGTCTCAGCTCATCGGCCATCTaGGAGAGATCTCGCTTCATAGCATACGCGTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: FSTSCRLSSSAI*ERSRFIAYASS Trigger: GGAAGACGCGTATGCTATGAAGCGAGATCTCTCGCAGATGGCCGATGAGCTGAGACGGCAGCTGGTGCTGAA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000025463.14 ENSMUST00000125127.8 ENSMUST00000127234.8 ENSMUST00000153363.3 ENSMUST00000156400.9 |
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| CDS GCA 72 bp | CCCAGAACCACATATCTGCCTTTCTTCAGCACCAGCTaGCGTCTCAGCTCATCGGCCATCTGCGAGAGATCT | + |
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Preference number: 6 (lower is better) Translates to: PRTTYLPFFSTS*RLSSSAICERS Trigger: AGATCTCTCGCAGATGGCCGATGAGCTGAGACGGCAGCTGGTGCTGAAGAAAGGCAGATATGTGGTTCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000025463.14 ENSMUST00000125127.8 ENSMUST00000127234.8 ENSMUST00000153363.3 ENSMUST00000156400.9 |
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| CDS GCA 72 bp | GGGTCTGCAAGCTGTCTTGGACATCAGTGCTGTCTTTaGCATCACTACCACTGTCACCTCCGGCCAGGTTCT | + |
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Preference number: 6 (lower is better) Translates to: GSASCLGHQCCL*HHYHCHLRPGS Trigger: AGAACCTGGCCGGAGGTGACAGTGGTAGTGATGGCAAAGACAGCACTGATGTCCAAGACAGCTTGCAGACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000025463.14 ENSMUST00000125127.8 ENSMUST00000127234.8 ENSMUST00000153363.3 ENSMUST00000156400.9 |
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| CDS CAA 72 bp | AGGGTCTGCAAGCTGTCTTGGACATCAGTGCTGTCTTaGCCATCACTACCACTGTCACCTCCGGCCAGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: RVCKLSWTSVLS*PSLPLSPPARF Trigger: GAACCTGGCCGGAGGTGACAGTGGTAGTGATGGCAAAGACAGCACTGATGTCCAAGACAGCTTGCAGACCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000025463.14 ENSMUST00000125127.8 ENSMUST00000127234.8 ENSMUST00000153363.3 ENSMUST00000156400.9 |
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| CDS GCA 72 bp | TACCCTGATTCTCCTTGGAGCCCAGAACCACATATCTaGCTTTCTTCAGCACCAGCTGCCGTCTCAGCTCAT | + |
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Preference number: 6 (lower is better) Translates to: YPDSPWSPEPHI*LSSAPAAVSAH Trigger: ATGAGCTGAGACGGCAGCTGGTGCTGAAGAAAGGCAGATATGTGGTTCTGGGCTCCAAGGAGAATCAGGGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000025463.14 ENSMUST00000125127.8 ENSMUST00000127234.8 ENSMUST00000153363.3 ENSMUST00000156400.9 |
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| CDS CCA 72 bp | CTTCAGAACCAGGAAGTGTGCTACCCTGATTCTCCTTaGAGCCCAGAACCACATATCTGCCTTTCTTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: LQNQEVCYPDSP*SPEPHICLSSA Trigger: TGCTGAAGAAAGGCAGATATGTGGTTCTGGGCTCCAAGGAGAATCAGGGTAGCACACTTCCTGGTTCTGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000025463.14 ENSMUST00000125127.8 ENSMUST00000127234.8 ENSMUST00000153363.3 ENSMUST00000156400.9 |
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