Pregenerated sensors for NAA11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046000Ensembl transcript IDs: ENSMUST00000060265.6
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACTCGGTGTGCTTGGTGCTGGCCTGGAGAAATCACTCAGGTAAGCTaGGGCTCCTCCTGTTTCTCCATCTGCTGGGCTGTTACCACAAAG | + |
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Preference number: 1 (lower is better) Translates to: TRCAWCWPGEITQVS*GSSCFSICWAVTTK Trigger: CTTTGTGGTAACAGCCCAGCAGATGGAGAAACAGGAGGAGCCTCAGCTTACCTGAGTGATTTCTCCAGGCCAGCACCAAGCACACCGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| 3UTR CCA 90 bp | TGCGTTGCTCAATTTCTGATGTCTCCTGGTGACAATGCAAAGCACTaGTGGCTTTGTTCAGGGGCACTGCAAACACCCGGAAGCCTTTCT | + |
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Preference number: 1 (lower is better) Translates to: CVAQFLMSPGDNAKH*WLCSGALQTPGSLS Trigger: AGAAAGGCTTCCGGGTGTTTGCAGTGCCCCTGAACAAAGCCACCAGTGCTTTGCATTGTCACCAGGAGACATCAGAAATTGAGCAACGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| 3UTR TCA 90 bp | AGAGAAAGAATCATAATTGGCTGTGTGAAAAGAACAGTGTTGTTATaGACGCAGCGTCCGAGGCCCCCAGGAATAGGAAGGCGGCTGCTT | + |
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Preference number: 1 (lower is better) Translates to: RERIIIGCVKRTVLL*TQRPRPPGIGRRLL Trigger: AAGCAGCCGCCTTCCTATTCCTGGGGGCCTCGGACGCTGCGTTCATAACAACACTGTTCTTTTCACACAGCCAATTATGATTCTTTCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| 3UTR GCA 90 bp | CAGAGTTGTCCCTGCTTCCTGTTTGTGGTTTCTAAGAGACAACTGTaGAATGTATCTACAAGCCAACACAGGACCACGGCAAACAGTCCA | + |
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Preference number: 1 (lower is better) Translates to: QSCPCFLFVVSKRQL*NVSTSQHRTTANSP Trigger: TGGACTGTTTGCCGTGGTCCTGTGTTGGCTTGTAGATACATTGCACAGTTGTCTCTTAGAAACCACAAACAGGAAGCAGGGACAACTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| 3UTR CCA 90 bp | TCAAACAGGAGCAAAGAAGAAACTGGCTTTGATTTTCCGCAGGGTTaGGTTGAGATCCCGAGTAATCATTTCCTGCACTGCTTCCAAAAT | + |
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Preference number: 1 (lower is better) Translates to: SNRSKEETGFDFPQG*VEIPSNHFLHCFQN Trigger: ATTTTGGAAGCAGTGCAGGAAATGATTACTCGGGATCTCAACCCAACCCTGCGGAAAATCAAAGCCAGTTTCTTCTTTGCTCCTGTTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| 3UTR GCA 90 bp | GTTAATATAATTGCTGCTCGCTCTTTTCTTAAAGTTTATACATTCTaGTTGTATGGTGTAGTAGAGCCCTTCTTTATCACGTTTTCCCAC | + |
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Preference number: 1 (lower is better) Translates to: VNIIAARSFLKVYTF*LYGVVEPFFITFSH Trigger: GTGGGAAAACGTGATAAAGAAGGGCTCTACTACACCATACAAGCAGAATGTATAAACTTTAAGAAAAGAGCGAGCAGCAATTATATTAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| 3UTR-3UTR TCA 90 bp | CAATGGCAGCACAGTGAGAGAACGCCAGGGATGTTTTGTCACAGCAGGCCTCAACACAATAGGTGTGGCTaGGACATGAAGGCCAGCGAT | + |
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Preference number: 2 (lower is better) Translates to: QWQHSERTPGMFCHSRPQHNRCG*DMKASD Trigger: ATCGCTGGCCTTCATGTCTCAGCCACACCTATTGTG...TTGAGGCCTGCTGTGACAAAACATCCCTGGCGTTCTCTCACTGTGCTGCCATTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| 3UTR-3UTR TCA 90 bp | CTGTTTCTCCATCTGCTGGGCTGTTACCACAAAGACATATTGACAAGGGCTCAAGGTGTGGCTGAGACATaGAGGCCAGCGATGCTCAGG | + |
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Preference number: 2 (lower is better) Translates to: LFLHLLGCYHKDILTRAQGVAET*RPAMLR Trigger: CCTGAGCATCGCTGGCCTTCATGTCTCAGCCACACC...TTGAGCCCTTGTCAATATGTCTTTGTGGTAACAGCCCAGCAGATGGAGAAACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| 3UTR-3UTR CCA 90 bp | CTTACCAGTTTTGGCTTAATTTCCAGCACTACTCTGTGTGTCTCCCTCACTCCCCGGTGTGCTTGGTGCTaGCCTGGAGAAATCACTCAG | + |
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Preference number: 2 (lower is better) Translates to: LTSFGLISSTTLCVSLTPRCAWC*PGEITQ Trigger: CTGAGTGATTTCTCCAGGCCAGCACCAAGCACACCG...GGGAGTGAGGGAGACACACAGAGTAGTGCTGGAAATTAAGCCAAAACTGGTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| 3UTR-3UTR CCA 90 bp | CTTACCAGTTTTGGCTTAATTTCCAGCACTACTCTGTGTGTCTCCCTCACTCCCGACAATGCAAAGCACTaGTGGCTTTGTTCAGGGGCA | + |
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Preference number: 2 (lower is better) Translates to: LTSFGLISSTTLCVSLTPDNAKH*WLCSGA Trigger: TGCCCCTGAACAAAGCCACCAGTGCTTTGCATTGTC...GGGAGTGAGGGAGACACACAGAGTAGTGCTGGAAATTAAGCCAAAACTGGTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| 3UTR-3UTR TCA 90 bp | GGCGTTCTCCACACACTGGGGCCGATTTGTAAGAAGTACTTAGCAGGGCTGATGCTCCTTTTTGCCATTTaGCACTTTAACATCGCTTTG | + |
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Preference number: 2 (lower is better) Translates to: GVLHTLGPICKKYLAGLMLLFAI*HFNIAL Trigger: CAAAGCGATGTTAAAGTGTCAAATGGCAAAAAGGAG...CATCAGCCCTGCTAAGTACTTCTTACAAATCGGCCCCAGTGTGTGGAGAACGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| 3UTR-3UTR CCA 90 bp | CTCCATCTGCTGGGCTGTTACCACAAAGACATATTGACAAGGGCTCAAGGAAAATTTCTGGAGAGTCACTaGGAGATAACCCCAGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: LHLLGCYHKDILTRAQGKFLESH*EITPEQ Trigger: CTGCTCTGGGGTTATCTCCCAGTGACTCTCCAGAAA...TTTTCCTTGAGCCCTTGTCAATATGTCTTTGTGGTAACAGCCCAGCAGATGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| 3UTR-3UTR GCA 90 bp | GGCGTTCTCCACACACTGGGGCCGATTTGTAAGAAGTACTTAGCAGGGCTGATGTCTAAGAGACAACTGTaGAATGTATCTACAAGCCAA | + |
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Preference number: 2 (lower is better) Translates to: GVLHTLGPICKKYLAGLMSKRQL*NVSTSQ Trigger: TTGGCTTGTAGATACATTGCACAGTTGTCTCTTAGA...CATCAGCCCTGCTAAGTACTTCTTACAAATCGGCCCCAGTGTGTGGAGAACGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| 3UTR-3UTR GCA 90 bp | CTGTTTCTCCATCTGCTGGGCTGTTACCACAAAGACATATTGACAAGGGCTCAACTCCAGAGTTGTCCCTaGTTCCTGTTTGTGGTTTCT | + |
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Preference number: 2 (lower is better) Translates to: LFLHLLGCYHKDILTRAQLQSCP*FLFVVS Trigger: AGAAACCACAAACAGGAAGCAGGGACAACTCTGGAG...TTGAGCCCTTGTCAATATGTCTTTGTGGTAACAGCCCAGCAGATGGAGAAACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| 3UTR-3UTR CCA 90 bp | CTTACCAGTTTTGGCTTAATTTCCAGCACTACTCTGTGTGTCTCCCTCACTCCCCCTGCTTCCTGTTTGTaGTTTCTAAGAGACAACTGT | + |
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Preference number: 2 (lower is better) Translates to: LTSFGLISSTTLCVSLTPPASCL*FLRDNC Trigger: ACAGTTGTCTCTTAGAAACCACAAACAGGAAGCAGG...GGGAGTGAGGGAGACACACAGAGTAGTGCTGGAAATTAAGCCAAAACTGGTAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| 3UTR-3UTR CCA 90 bp | CTCCATCTGCTGGGCTGTTACCACAAAGACATATTGACAAGGGCTCAAGGAAAAGGTTGCCACACAAAATaGCAAATCCTTCTACGGAGA | + |
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Preference number: 2 (lower is better) Translates to: LHLLGCYHKDILTRAQGKGCHTK*QILLRR Trigger: TCTCCGTAGAAGGATTTGCCATTTTGTGTGGCAACC...TTTTCCTTGAGCCCTTGTCAATATGTCTTTGTGGTAACAGCCCAGCAGATGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| 3UTR CAA 90 bp | ACAGGAGCAAAGAAGAAACTGGCTTTGATTTTCCGCAGGGTTGGGTaGAGATCCCGAGTAATCATTTCCTGCACTGCTTCCAAAATTTCT | + |
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Preference number: 2 (lower is better) Translates to: TGAKKKLALIFRRVG*RSRVIISCTASKIS Trigger: AGAAATTTTGGAAGCAGTGCAGGAAATGATTACTCGGGATCTCAACCCAACCCTGCGGAAAATCAAAGCCAGTTTCTTCTTTGCTCCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| 3UTR-3UTR GCA 90 bp | CTCCATCTGCTGGGCTGTTACCACAAAGACATATTGACAAGGGCTCAAGGAAAAAGGAAACAGGTAAATTaGACTAGAAGAGGAAAGGGG | + |
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Preference number: 2 (lower is better) Translates to: LHLLGCYHKDILTRAQGKRKQVN*TRRGKG Trigger: CCCCTTTCCTCTTCTAGTGCAATTTACCTGTTTCCT...TTTTCCTTGAGCCCTTGTCAATATGTCTTTGTGGTAACAGCCCAGCAGATGGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| 3UTR-3UTR GCA 90 bp | CTTACCAGTTTTGGCTTAATTTCCAGCACTACTCTGTGTGTCTCCCTCACTCCCTTATCAGTAAGATTATaGTGCCCTGGAGACAGATGT | + |
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Preference number: 2 (lower is better) Translates to: LTSFGLISSTTLCVSLTPLSVRL*CPGDRC Trigger: ACATCTGTCTCCAGGGCAGCATAATCTTACTGATAA...GGGAGTGAGGGAGACACACAGAGTAGTGCTGGAAATTAAGCCAAAACTGGTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| 3UTR-3UTR CCA 90 bp | CCGAGTAATCATTTCCTGCACTGCTTCCAAAATTTCTTATCTGTAAAACAGAGACGGCAAACAGTCCAATaGCAGCACAGTGAGAGAACG | + |
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Preference number: 2 (lower is better) Translates to: PSNHFLHCFQNFLSVKQRRQTVQ*QHSERT Trigger: CGTTCTCTCACTGTGCTGCCATTGGACTGTTTGCCG...TCTCTGTTTTACAGATAAGAAATTTTGGAAGCAGTGCAGGAAATGATTACTCGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| 3UTR-3UTR CCA 90 bp | CTGTTTCTCCATCTGCTGGGCTGTTACCACAAAGACATATTGACAAGGGCTCAATACATTCTGCTTGTATaGTGTAGTAGAGCCCTTCTT | + |
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Preference number: 2 (lower is better) Translates to: LFLHLLGCYHKDILTRAQYILLV*CSRALL Trigger: AAGAAGGGCTCTACTACACCATACAAGCAGAATGTA...TTGAGCCCTTGTCAATATGTCTTTGTGGTAACAGCCCAGCAGATGGAGAAACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| 3UTR-3UTR GCA 90 bp | CCGAGTAATCATTTCCTGCACTGCTTCCAAAATTTCTTATCTGTAAAACAGAGAAGCTTCCTTGGCTCTTaGGCTGAGGTGTTCCTTCAT | + |
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Preference number: 2 (lower is better) Translates to: PSNHFLHCFQNFLSVKQRSFLGS*AEVFLH Trigger: ATGAAGGAACACCTCAGCGCAAGAGCCAAGGAAGCT...TCTCTGTTTTACAGATAAGAAATTTTGGAAGCAGTGCAGGAAATGATTACTCGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| 3UTR-3UTR TCA 90 bp | CCGAGTAATCATTTCCTGCACTGCTTCCAAAATTTCTTATCTGTAAAACAGAGAGGGAAAAATGCCCCTTaGATCATAGAGGATAGGACA | + |
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Preference number: 2 (lower is better) Translates to: PSNHFLHCFQNFLSVKQRGKNAP*IIEDRT Trigger: TGTCCTATCCTCTATGATTCAAGGGGCATTTTTCCC...TCTCTGTTTTACAGATAAGAAATTTTGGAAGCAGTGCAGGAAATGATTACTCGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| 3UTR CAA 90 bp | TCCTTTTTGCCATTTGACACTTTAACATCGCTTTGCAAATACATTTaGAGTTCAAACAGGAGCAAAGAAGAAACTGGCTTTGATTTTCCG | + |
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Preference number: 2 (lower is better) Translates to: SFLPFDTLTSLCKYI*SSNRSKEETGFDFP Trigger: CGGAAAATCAAAGCCAGTTTCTTCTTTGCTCCTGTTTGAACTCAAAATGTATTTGCAAAGCGATGTTAAAGTGTCAAATGGCAAAAAGGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| 3UTR CAA 90 bp | ACACACTCATCTCTGGTCATCAGCTGCTTAATGTCAGGGCTTAGATaGAAATCCATATACTCCAGTTTTCATAAAAATGTAAACATGAAC | + |
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Preference number: 2 (lower is better) Translates to: THSSLVISCLMSGLR*KSIYSSFHKNVNMN Trigger: GTTCATGTTTACATTTTTATGAAAACTGGAGTATATGGATTTCAATCTAAGCCCTGACATTAAGCAGCTGATGACCAGAGATGAGTGTGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| 3UTR-3UTR TCA 90 bp | AGCTGCTTAATGTCAGGGCTTAGATTGAAATCCATATACTCCAGTTTTCATAAAAAAGCAAAAAGCAACTaGCATGTACAAGCAGATGAG | + |
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Preference number: 2 (lower is better) Translates to: SCLMSGLRLKSIYSSFHKKAKSN*HVQADE Trigger: CTCATCTGCTTGTACATGTCAGTTGCTTTTTGCTTT...TTTATGAAAACTGGAGTATATGGATTTCAATCTAAGCCCTGACATTAAGCAGCT 37% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| 3UTR TCA 72 bp | CACAGGACCACGGCAAACAGTCCAATGGCAGCACAGTaGGAGAACGCCAGGGATGTTTTGTCACAGCAGGCC | + |
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Preference number: 3 (lower is better) Translates to: HRTTANSPMAAQ*ENARDVLSQQA Trigger: GGCCTGCTGTGACAAAACATCCCTGGCGTTCTCTCACTGTGCTGCCATTGGACTGTTTGCCGTGGTCCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| 3UTR-3UTR CAA 90 bp | AATGTATCTACAAGCCAACACAGGACCACGGCAAACAGTCCAATGGCAGCACAGAGGCCTCAAGCTTCCTaGGCTCTTGCGCTGAGGTGT | + |
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Preference number: 3 (lower is better) Translates to: NVSTSQHRTTANSPMAAQRPQAS*ALALRC Trigger: ACACCTCAGCGCAAGAGCCAAGGAAGCTTGAGGCCT...CTGTGCTGCCATTGGACTGTTTGCCGTGGTCCTGTGTTGGCTTGTAGATACATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| 3UTR CCA 72 bp | CTACAAGCCAACACAGGACCACGGCAAACAGTCCAATaGCAGCACAGTGAGAGAACGCCAGGGATGTTTTGT | + |
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Preference number: 3 (lower is better) Translates to: LQANTGPRQTVQ*QHSERTPGMFC Trigger: ACAAAACATCCCTGGCGTTCTCTCACTGTGCTGCCATTGGACTGTTTGCCGTGGTCCTGTGTTGGCTTGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| 3UTR CCA 72 bp | TTTCTGATGTCTCCTGGTGACAATGCAAAGCACTGGTaGCTTTGTTCAGGGGCACTGCAAACACCCGGAAGC | + |
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Preference number: 3 (lower is better) Translates to: FLMSPGDNAKHW*LCSGALQTPGS Trigger: GCTTCCGGGTGTTTGCAGTGCCCCTGAACAAAGCCACCAGTGCTTTGCATTGTCACCAGGAGACATCAGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| 3UTR-3UTR CAA 90 bp | GGCGTTCTCCACACACTGGGGCCGATTTGTAAGAAGTACTTAGCAGGGCTGATGATAGGACACATGGAGTaGCACAGAAAGCAAGAGGAA | + |
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Preference number: 3 (lower is better) Translates to: GVLHTLGPICKKYLAGLMIGHME*HRKQEE Trigger: TTCCTCTTGCTTTCTGTGCAACTCCATGTGTCCTAT...CATCAGCCCTGCTAAGTACTTCTTACAAATCGGCCCCAGTGTGTGGAGAACGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| 3UTR GCA 72 bp | ACAATGCAAAGCACTGGTGGCTTTGTTCAGGGGCACTaGAAACACCCGGAAGCCTTTCTGATTTCCCAATTG | + |
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Preference number: 3 (lower is better) Translates to: TMQSTGGFVQGH*KHPEAFLISQL Trigger: CAATTGGGAAATCAGAAAGGCTTCCGGGTGTTTGCAGTGCCCCTGAACAAAGCCACCAGTGCTTTGCATTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| 3UTR-3UTR CAA 90 bp | CTTACCAGTTTTGGCTTAATTTCCAGCACTACTCTGTGTGTCTCCCTCACTCCCTTCCGCAGGGTTGGGTaGAGATCCCGAGTAATCATT | + |
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Preference number: 3 (lower is better) Translates to: LTSFGLISSTTLCVSLTPFRRVG*RSRVII Trigger: AATGATTACTCGGGATCTCAACCCAACCCTGCGGAA...GGGAGTGAGGGAGACACACAGAGTAGTGCTGGAAATTAAGCCAAAACTGGTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| 3UTR TCA 72 bp | ATCATAATTGGCTGTGTGAAAAGAACAGTGTTGTTATaGACGCAGCGTCCGAGGCCCCCAGGAATAGGAAGG | + |
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Preference number: 3 (lower is better) Translates to: IIIGCVKRTVLL*TQRPRPPGIGR Trigger: CCTTCCTATTCCTGGGGGCCTCGGACGCTGCGTTCATAACAACACTGTTCTTTTCACACAGCCAATTATGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| 3UTR GCA 72 bp | CCCTGCTTCCTGTTTGTGGTTTCTAAGAGACAACTGTaGAATGTATCTACAAGCCAACACAGGACCACGGCA | + |
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Preference number: 3 (lower is better) Translates to: PCFLFVVSKRQL*NVSTSQHRTTA Trigger: TGCCGTGGTCCTGTGTTGGCTTGTAGATACATTGCACAGTTGTCTCTTAGAAACCACAAACAGGAAGCAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| 3UTR CCA 72 bp | CGTTTCTGGAGAGCTTTACAGTTTCTGGAGAGTCACTaGGAGATAACCCCAGAGCAGCAGAGAAGATACTTC | + |
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Preference number: 3 (lower is better) Translates to: RFWRALQFLESH*EITPEQQRRYF Trigger: GAAGTATCTTCTCTGCTGCTCTGGGGTTATCTCCCAGTGACTCTCCAGAAACTGTAAAGCTCTCCAGAAACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| 3UTR CCA 72 bp | AGCAAAGAAGAAACTGGCTTTGATTTTCCGCAGGGTTaGGTTGAGATCCCGAGTAATCATTTCCTGCACTGC | + |
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Preference number: 3 (lower is better) Translates to: SKEETGFDFPQG*VEIPSNHFLHC Trigger: GCAGTGCAGGAAATGATTACTCGGGATCTCAACCCAACCCTGCGGAAAATCAAAGCCAGTTTCTTCTTTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| 3UTR-3UTR CAA 90 bp | AGCTGCTTAATGTCAGGGCTTAGATTGAAATCCATATACTCCAGTTTTCATAAAAACGCCAGGGATGTTTaGTCACAGCAGGCCTCAAGC | + |
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Preference number: 3 (lower is better) Translates to: SCLMSGLRLKSIYSSFHKNARDV*SQQASS Trigger: GCTTGAGGCCTGCTGTGACAAAACATCCCTGGCGTT...TTTATGAAAACTGGAGTATATGGATTTCAATCTAAGCCCTGACATTAAGCAGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| 3UTR TCA 72 bp | GGGAAGTCAAAGCCCTTTGCCTACACTTACTTTTACTaGGACACTCACCAGGGATTACAATCAAAAGTTACA | + |
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Preference number: 3 (lower is better) Translates to: GKSKPFAYTYFY*DTHQGLQSKVT Trigger: TGTAACTTTTGATTGTAATCCCTGGTGAGTGTCTCAGTAAAAGTAAGTGTAGGCAAAGGGCTTTGACTTCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| 3UTR-3UTR CAA 90 bp | AGCTGCTTAATGTCAGGGCTTAGATTGAAATCCATATACTCCAGTTTTCATAAACTGAAACCTCCAGAGTaGTCCCTGCTTCCTGTTTGT | + |
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Preference number: 3 (lower is better) Translates to: SCLMSGLRLKSIYSSFHKLKPPE*SLLPVC Trigger: ACAAACAGGAAGCAGGGACAACTCTGGAGGTTTCAG...TTTATGAAAACTGGAGTATATGGATTTCAATCTAAGCCCTGACATTAAGCAGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| 3UTR GCA 72 bp | ATTGCTGCTCGCTCTTTTCTTAAAGTTTATACATTCTaGTTGTATGGTGTAGTAGAGCCCTTCTTTATCACG | + |
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Preference number: 3 (lower is better) Translates to: IAARSFLKVYTF*LYGVVEPFFIT Trigger: CGTGATAAAGAAGGGCTCTACTACACCATACAAGCAGAATGTATAAACTTTAAGAAAAGAGCGAGCAGCAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| CDS-3UTR TCA 90 bp | CAATGGCAGCACAGTGAGAGAACGCCAGGGATGTTTTGTCACAGCAGGCCTCAAGCCGAGGCGCCGGTGTaGGCGCTTGACGGCCAGCGA | + |
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Preference number: 4 (lower is better) Translates to: QWQHSERTPGMFCHSRPQAEAPV*ALDGQR Trigger: TCGCTGGCCGTCAAGCGCTCACACCGGCGCCTCGGC...TTGAGGCCTGCTGTGACAAAACATCCCTGGCGTTCTCTCACTGTGCTGCCATTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| CDS-3UTR CCA 90 bp | CAATGGCAGCACAGTGAGAGAACGCCAGGGATGTTTTGTCACAGCAGGCCTCAAATCGCCCGTGAGGCCTaGTCCATGAGCTTCTGGGCC | + |
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Preference number: 4 (lower is better) Translates to: QWQHSERTPGMFCHSRPQIAREA*SMSFWA Trigger: GGCCCAGAAGCTCATGGACCAGGCCTCACGGGCGAT...TTGAGGCCTGCTGTGACAAAACATCCCTGGCGTTCTCTCACTGTGCTGCCATTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| CDS-3UTR CCA 90 bp | AATGTATCTACAAGCCAACACAGGACCACGGCAAACAGTCCAATGGCAGCACAGGGAAGTGTGCCGCCCTaGGTCTCCTCGGAGCCCAGA | + |
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Preference number: 4 (lower is better) Translates to: NVSTSQHRTTANSPMAAQGSVPP*VSSEPR Trigger: TCTGGGCTCCGAGGAGACCCAGGGCGGCACACTTCC...CTGTGCTGCCATTGGACTGTTTGCCGTGGTCCTGTGTTGGCTTGTAGATACATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| CDS-3UTR CCA 90 bp | GGCGTTCTCCACACACTGGGGCCGATTTGTAAGAAGTACTTAGCAGGGCTGATGGGTCCTCCTCCATCTTaGCCAGGACATAGCCCACGA | + |
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Preference number: 4 (lower is better) Translates to: GVLHTLGPICKKYLAGLMGPPPS*PGHSPR Trigger: TCGTGGGCTATGTCCTGGCCAAGATGGAGGAGGACC...CATCAGCCCTGCTAAGTACTTCTTACAAATCGGCCCCAGTGTGTGGAGAACGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| CDS-3UTR GCA 90 bp | CAATGGCAGCACAGTGAGAGAACGCCAGGGATGTTTTGTCACAGCAGGCCTCAATTGCTCTTCCTGACGTaGAGGGACACGTACTTGGCG | + |
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Preference number: 4 (lower is better) Translates to: QWQHSERTPGMFCHSRPQLLFLT*RDTYLA Trigger: CGCCAAGTACGTGTCCCTGCACGTCAGGAAGAGCAA...TTGAGGCCTGCTGTGACAAAACATCCCTGGCGTTCTCTCACTGTGCTGCCATTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| CDS-3UTR GCA 90 bp | CTTACCAGTTTTGGCTTAATTTCCAGCACTACTCTGTGTGTCTCCCTCACTCCCCAGCATCAGGAAGTGTaGCGCCCTGGGTCTCCTCGG | + |
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Preference number: 4 (lower is better) Translates to: LTSFGLISSTTLCVSLTPQHQEV*RPGSPR Trigger: CCGAGGAGACCCAGGGCGGCACACTTCCTGATGCTG...GGGAGTGAGGGAGACACACAGAGTAGTGCTGGAAATTAAGCCAAAACTGGTAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| CDS-3UTR TCA 90 bp | GGCGTTCTCCACACACTGGGGCCGATTTGTAAGAAGTACTTAGCAGGGCTGATGAGCTCATCAGTCATCTaGGAGAGATCCCGCTTCATG | + |
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Preference number: 4 (lower is better) Translates to: GVLHTLGPICKKYLAGLMSSSVI*ERSRFM Trigger: CATGAAGCGGGATCTCTCTCAGATGACTGATGAGCT...CATCAGCCCTGCTAAGTACTTCTTACAAATCGGCCCCAGTGTGTGGAGAACGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| CDS-3UTR GCA 90 bp | CTTACCAGTTTTGGCTTAATTTCCAGCACTACTCTGTGTGTCTCCCTCACTCCCCATAGCCCACGATCTTaGCGTCCTCATCCTCGGCGA | + |
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Preference number: 4 (lower is better) Translates to: LTSFGLISSTTLCVSLTPHSPRS*RPHPRR Trigger: TCGCCGAGGATGAGGACGGCAAGATCGTGGGCTATG...GGGAGTGAGGGAGACACACAGAGTAGTGCTGGAAATTAAGCCAAAACTGGTAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| CDS-3UTR CCA 90 bp | AATGTATCTACAAGCCAACACAGGACCACGGCAAACAGTCCAATGGCAGCACAGCACTGTCTTTGCTTGTaGGGTTCTTGGGCAGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: NVSTSQHRTTANSPMAAQHCLCL*GSWAGR Trigger: CCTGCCTGCCCAAGAACCCCACAAGCAAAGACAGTG...CTGTGCTGCCATTGGACTGTTTGCCGTGGTCCTGTGTTGGCTTGTAGATACATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| CDS-3UTR GCA 90 bp | AATGTATCTACAAGCCAACACAGGACCACGGCAAACAGTCCAATGGCAGCACAGCAGTGCTGTCACTGCTaGCACTGTCTTTGCTTGTGG | + |
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Preference number: 4 (lower is better) Translates to: NVSTSQHRTTANSPMAAQQCCHC*HCLCLW Trigger: CCACAAGCAAAGACAGTGGCAGCAGTGACAGCACTG...CTGTGCTGCCATTGGACTGTTTGCCGTGGTCCTGTGTTGGCTTGTAGATACATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| CDS-3UTR CCA 90 bp | CAATGGCAGCACAGTGAGAGAACGCCAGGGATGTTTTGTCACAGCAGGCCTCAAAGAGATCCCGCTTCATaGCGTAAGCATCTTCACCAT | + |
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Preference number: 4 (lower is better) Translates to: QWQHSERTPGMFCHSRPQRDPAS*RKHLHH Trigger: ATGGTGAAGATGCTTACGCCATGAAGCGGGATCTCT...TTGAGGCCTGCTGTGACAAAACATCCCTGGCGTTCTCTCACTGTGCTGCCATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| CDS-3UTR GCA 90 bp | CTCCATCTGCTGGGCTGTTACCACAAAGACATATTGACAAGGGCTCAAGGAAAATGCTGCCACTGTCTTTaGTTGTGGGGTTCTTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: LHLLGCYHKDILTRAQGKCCHCL*LWGSWA Trigger: TGCCCAAGAACCCCACAAGCAAAGACAGTGGCAGCA...TTTTCCTTGAGCCCTTGTCAATATGTCTTTGTGGTAACAGCCCAGCAGATGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| CDS-3UTR CCA 90 bp | CTCCATCTGCTGGGCTGTTACCACAAAGACATATTGACAAGGGCTCAAGGAAAATCCTCTGAGCTGTCCTaGACATCAGTGCTGTCACTG | + |
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Preference number: 4 (lower is better) Translates to: LHLLGCYHKDILTRAQGKSSELS*TSVLSL Trigger: CAGTGACAGCACTGATGTCCAGGACAGCTCAGAGGA...TTTTCCTTGAGCCCTTGTCAATATGTCTTTGTGGTAACAGCCCAGCAGATGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| CDS-3UTR CCA 90 bp | CTTACCAGTTTTGGCTTAATTTCCAGCACTACTCTGTGTGTCTCCCTCACTCCCTCCACCTCACTGACCTaGAAGTTGAGGGTGTTAGAA | + |
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Preference number: 4 (lower is better) Translates to: LTSFGLISSTTLCVSLTPSTSLT*KLRVLE Trigger: TTCTAACACCCTCAACTTCCAGGTCAGTGAGGTGGA...GGGAGTGAGGGAGACACACAGAGTAGTGCTGGAAATTAAGCCAAAACTGGTAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| CDS-3UTR GCA 90 bp | AAAGCCCTTTGCCTACACTTACTTTTACTGAGACACTCACCAGGGATTACAATCTGTCCTGGACATCAGTaGTGTCACTGCTGCCACTGT | + |
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Preference number: 4 (lower is better) Translates to: KALCLHLLLLRHSPGITICPGHQ*CHCCHC Trigger: ACAGTGGCAGCAGTGACAGCACTGATGTCCAGGACA...GATTGTAATCCCTGGTGAGTGTCTCAGTAAAAGTAAGTGTAGGCAAAGGGCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| CDS-3UTR CCA 90 bp | AGCTGCTTAATGTCAGGGCTTAGATTGAAATCCATATACTCCAGTTTTCATAAATGCTTGTGGGGTTCTTaGGCAGGCAGGCCTCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: SCLMSGLRLKSIYSSFHKCLWGS*AGRPPQ Trigger: CTGGGGAGGCCTGCCTGCCCAAGAACCCCACAAGCA...TTTATGAAAACTGGAGTATATGGATTTCAATCTAAGCCCTGACATTAAGCAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| CDS-3UTR TCA 90 bp | CCGAGTAATCATTTCCTGCACTGCTTCCAAAATTTCTTATCTGTAAAACAGAGACCCTGTTGCTCTTCCTaGCGTGCAGGGACACGTACT | + |
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Preference number: 4 (lower is better) Translates to: PSNHFLHCFQNFLSVKQRPCCSS*RAGTRT Trigger: AGTACGTGTCCCTGCACGTCAGGAAGAGCAACAGGG...TCTCTGTTTTACAGATAAGAAATTTTGGAAGCAGTGCAGGAAATGATTACTCGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| 3UTR CAA 72 bp | CAAGCTGAAACCTCCAGAGTTGTCCCTGCTTCCTGTTaGTGGTTTCTAAGAGACAACTGTGCAATGTATCTA | + |
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Preference number: 4 (lower is better) Translates to: QAETSRVVPASC*WFLRDNCAMYL Trigger: TAGATACATTGCACAGTTGTCTCTTAGAAACCACAAACAGGAAGCAGGGACAACTCTGGAGGTTTCAGCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| CDS-3UTR GCA 90 bp | CCGAGTAATCATTTCCTGCACTGCTTCCAAAATTTCTTATCTGTAAAACAGAGAGCAGGCAGAGCAGGTTaGAGTGCTGCATGTTCATCA | + |
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Preference number: 4 (lower is better) Translates to: PSNHFLHCFQNFLSVKQRAGRAG*SAACSS Trigger: TGATGAACATGCAGCACTGCAACCTGCTCTGCCTGC...TCTCTGTTTTACAGATAAGAAATTTTGGAAGCAGTGCAGGAAATGATTACTCGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| CDS-3UTR GCA 90 bp | CCGAGTAATCATTTCCTGCACTGCTTCCAAAATTTCTTATCTGTAAAACAGAGATTCTTCAGCACCAGCTaGCTTCTCAGCTCATCAGTC | + |
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Preference number: 4 (lower is better) Translates to: PSNHFLHCFQNFLSVKQRFFSTS*LLSSSV Trigger: GACTGATGAGCTGAGAAGGCAGCTGGTGCTGAAGAA...TCTCTGTTTTACAGATAAGAAATTTTGGAAGCAGTGCAGGAAATGATTACTCGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| 3UTR CAA 72 bp | TTTCTCCATCTGCTGGGCTGTTACCACAAAGACATATaGACAAGGGCTCAAGGAAAACACGGAATATTTTAT | + |
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Preference number: 4 (lower is better) Translates to: FLHLLGCYHKDI*TRAQGKHGIFY Trigger: ATAAAATATTCCGTGTTTTCCTTGAGCCCTTGTCAATATGTCTTTGTGGTAACAGCCCAGCAGATGGAGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| 3UTR CAA 72 bp | GCTGCTCGCTCTTTTCTTAAAGTTTATACATTCTGCTaGTATGGTGTAGTAGAGCCCTTCTTTATCACGTTT | + |
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Preference number: 4 (lower is better) Translates to: AARSFLKVYTFC*YGVVEPFFITF Trigger: AAACGTGATAAAGAAGGGCTCTACTACACCATACAAGCAGAATGTATAAACTTTAAGAAAAGAGCGAGCAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| 3UTR CAA 72 bp | CCATTTGACACTTTAACATCGCTTTGCAAATACATTTaGAGTTCAAACAGGAGCAAAGAAGAAACTGGCTTT | + |
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Preference number: 4 (lower is better) Translates to: PFDTLTSLCKYI*SSNRSKEETGF Trigger: AAAGCCAGTTTCTTCTTTGCTCCTGTTTGAACTCAAAATGTATTTGCAAAGCGATGTTAAAGTGTCAAATGG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| CDS GCA 90 bp | AGGCCGAGGCGCCGGTGTGAGCGCTTGACGGCCAGCGAGGTGATGTaGCCGTGGGGAACATCATCGGGGTCCTCCTCCATCTTGGCCAGG | + |
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Preference number: 5 (lower is better) Translates to: RPRRRCERLTASEVM*PWGTSSGSSSILAR Trigger: CCTGGCCAAGATGGAGGAGGACCCCGATGATGTTCCCCACGGGCACATCACCTCGCTGGCCGTCAAGCGCTCACACCGGCGCCTCGGCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| CDS GCA 90 bp | TTGTGGGGTTCTTGGGCAGGCAGGCCTCCCCAGCATCAGGAAGTGTaGCGCCCTGGGTCTCCTCGGAGCCCAGAACCACATATCTGTTCT | + |
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Preference number: 5 (lower is better) Translates to: LWGSWAGRPPQHQEV*RPGSPRSPEPHICS Trigger: AGAACAGATATGTGGTTCTGGGCTCCGAGGAGACCCAGGGCGGCACACTTCCTGATGCTGGGGAGGCCTGCCTGCCCAAGAACCCCACAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| CDS CCA 90 bp | TTCTTGGGCAGGCAGGCCTCCCCAGCATCAGGAAGTGTGCCGCCCTaGGTCTCCTCGGAGCCCAGAACCACATATCTGTTCTTCTTCAGC | + |
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Preference number: 5 (lower is better) Translates to: FLGRQASPASGSVPP*VSSEPRTTYLFFFS Trigger: GCTGAAGAAGAACAGATATGTGGTTCTGGGCTCCGAGGAGACCCAGGGCGGCACACTTCCTGATGCTGGGGAGGCCTGCCTGCCCAAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| CDS-3UTR CAA 90 bp | GGCGTTCTCCACACACTGGGGCCGATTTGTAAGAAGTACTTAGCAGGGCTGATGCGCCGGTGTGAGCGCTaGACGGCCAGCGAGGTGATG | + |
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Preference number: 5 (lower is better) Translates to: GVLHTLGPICKKYLAGLMRRCER*TASEVM Trigger: CATCACCTCGCTGGCCGTCAAGCGCTCACACCGGCG...CATCAGCCCTGCTAAGTACTTCTTACAAATCGGCCCCAGTGTGTGGAGAACGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| CDS GCA 90 bp | CTGAGCTGTCCTGGACATCAGTGCTGTCACTGCTGCCACTGTCTTTaGTTGTGGGGTTCTTGGGCAGGCAGGCCTCCCCAGCATCAGGAA | + |
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Preference number: 5 (lower is better) Translates to: LSCPGHQCCHCCHCL*LWGSWAGRPPQHQE Trigger: TTCCTGATGCTGGGGAGGCCTGCCTGCCCAAGAACCCCACAAGCAAAGACAGTGGCAGCAGTGACAGCACTGATGTCCAGGACAGCTCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| CDS CCA 90 bp | TGTCCTGGACATCAGTGCTGTCACTGCTGCCACTGTCTTTGCTTGTaGGGTTCTTGGGCAGGCAGGCCTCCCCAGCATCAGGAAGTGTGC | + |
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Preference number: 5 (lower is better) Translates to: CPGHQCCHCCHCLCL*GSWAGRPPQHQEVC Trigger: GCACACTTCCTGATGCTGGGGAGGCCTGCCTGCCCAAGAACCCCACAAGCAAAGACAGTGGCAGCAGTGACAGCACTGATGTCCAGGACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| CDS GCA 90 bp | AATCCAAGTCCTCTGAGCTGTCCTGGACATCAGTGCTGTCACTGCTaGCACTGTCTTTGCTTGTGGGGTTCTTGGGCAGGCAGGCCTCCC | + |
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Preference number: 5 (lower is better) Translates to: NPSPLSCPGHQCCHC*HCLCLWGSWAGRPP Trigger: GGGAGGCCTGCCTGCCCAAGAACCCCACAAGCAAAGACAGTGGCAGCAGTGACAGCACTGATGTCCAGGACAGCTCAGAGGACTTGGATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| CDS-3UTR CAA 90 bp | CTTACCAGTTTTGGCTTAATTTCCAGCACTACTCTGTGTGTCTCCCTCACTCCCTGCAGGGCCGCCCTGTaGCTCTTCCTGACGTGCAGG | + |
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Preference number: 5 (lower is better) Translates to: LTSFGLISSTTLCVSLTPCRAAL*LFLTCR Trigger: CCTGCACGTCAGGAAGAGCAACAGGGCGGCCCTGCA...GGGAGTGAGGGAGACACACAGAGTAGTGCTGGAAATTAAGCCAAAACTGGTAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| CDS-3UTR CAA 90 bp | CTCCATCTGCTGGGCTGTTACCACAAAGACATATTGACAAGGGCTCAAGGAAAATTGCTTGTGGGGTTCTaGGGCAGGCAGGCCTCCCCA | + |
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Preference number: 5 (lower is better) Translates to: LHLLGCYHKDILTRAQGKLLVGF*GRQASP Trigger: TGGGGAGGCCTGCCTGCCCAAGAACCCCACAAGCAA...TTTTCCTTGAGCCCTTGTCAATATGTCTTTGTGGTAACAGCCCAGCAGATGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| CDS-3UTR CAA 90 bp | CTGTTTCTCCATCTGCTGGGCTGTTACCACAAAGACATATTGACAAGGGCTCAAGGCAGGCAGAGCAGGTaGCAGTGCTGCATGTTCATC | + |
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Preference number: 5 (lower is better) Translates to: LFLHLLGCYHKDILTRAQGRQSR*QCCMFI Trigger: GATGAACATGCAGCACTGCAACCTGCTCTGCCTGCC...TTGAGCCCTTGTCAATATGTCTTTGTGGTAACAGCCCAGCAGATGGAGAAACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| CDS-3UTR CAA 90 bp | CTTACCAGTTTTGGCTTAATTTCCAGCACTACTCTGTGTGTCTCCCTCACTCCCTCACTGACCTGGAAGTaGAGGGTGTTAGAATACAGG | + |
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Preference number: 5 (lower is better) Translates to: LTSFGLISSTTLCVSLTPSLTWK*RVLEYR Trigger: CCTGTATTCTAACACCCTCAACTTCCAGGTCAGTGA...GGGAGTGAGGGAGACACACAGAGTAGTGCTGGAAATTAAGCCAAAACTGGTAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| CDS GCA 72 bp | CGCCGGTGTGAGCGCTTGACGGCCAGCGAGGTGATGTaGCCGTGGGGAACATCATCGGGGTCCTCCTCCATC | + |
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Preference number: 6 (lower is better) Translates to: RRCERLTASEVM*PWGTSSGSSSI Trigger: GATGGAGGAGGACCCCGATGATGTTCCCCACGGGCACATCACCTCGCTGGCCGTCAAGCGCTCACACCGGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| CDS CCA 72 bp | TGTGAGCGCTTGACGGCCAGCGAGGTGATGTGCCCGTaGGGAACATCATCGGGGTCCTCCTCCATCTTGGCC | + |
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Preference number: 6 (lower is better) Translates to: CERLTASEVMCP*GTSSGSSSILA Trigger: GGCCAAGATGGAGGAGGACCCCGATGATGTTCCCCACGGGCACATCACCTCGCTGGCCGTCAAGCGCTCACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| CDS CCA 72 bp | AGGCAGGCCTCCCCAGCATCAGGAAGTGTGCCGCCCTaGGTCTCCTCGGAGCCCAGAACCACATATCTGTTC | + |
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Preference number: 6 (lower is better) Translates to: RQASPASGSVPP*VSSEPRTTYLF Trigger: GAACAGATATGTGGTTCTGGGCTCCGAGGAGACCCAGGGCGGCACACTTCCTGATGCTGGGGAGGCCTGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| CDS GCA 72 bp | CCTGGACATCAGTGCTGTCACTGCTGCCACTGTCTTTaGTTGTGGGGTTCTTGGGCAGGCAGGCCTCCCCAG | + |
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Preference number: 6 (lower is better) Translates to: PGHQCCHCCHCL*LWGSWAGRPPQ Trigger: CTGGGGAGGCCTGCCTGCCCAAGAACCCCACAAGCAAAGACAGTGGCAGCAGTGACAGCACTGATGTCCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| CDS CCA 72 bp | CATCAGTGCTGTCACTGCTGCCACTGTCTTTGCTTGTaGGGTTCTTGGGCAGGCAGGCCTCCCCAGCATCAG | + |
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Preference number: 6 (lower is better) Translates to: HQCCHCCHCLCL*GSWAGRPPQHQ Trigger: CTGATGCTGGGGAGGCCTGCCTGCCCAAGAACCCCACAAGCAAAGACAGTGGCAGCAGTGACAGCACTGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| CDS CAA 72 bp | GGACATCAGTGCTGTCACTGCTGCCACTGTCTTTGCTaGTGGGGTTCTTGGGCAGGCAGGCCTCCCCAGCAT | + |
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Preference number: 6 (lower is better) Translates to: GHQCCHCCHCLC*WGSWAGRPPQH Trigger: ATGCTGGGGAGGCCTGCCTGCCCAAGAACCCCACAAGCAAAGACAGTGGCAGCAGTGACAGCACTGATGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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| CDS CAA 90 bp | AGCTGTCCTGGACATCAGTGCTGTCACTGCTGCCACTGTCTTTGCTaGTGGGGTTCTTGGGCAGGCAGGCCTCCCCAGCATCAGGAAGTG | + |
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Preference number: 6 (lower is better) Translates to: SCPGHQCCHCCHCLC*WGSWAGRPPQHQEV Trigger: CACTTCCTGATGCTGGGGAGGCCTGCCTGCCCAAGAACCCCACAAGCAAAGACAGTGGCAGCAGTGACAGCACTGATGTCCAGGACAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060265.6 |
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