Pregenerated sensors for N6AMT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044442Ensembl transcript IDs: ENSMUST00000054442.11, ENSMUST00000118115.2, ENSMUST00000118310.8, ENSMUST00000120284.8
Found 180 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGTAGGGTCTCACTGTATAGCCCTGGCTGGCCTGGAACTCAGATCTaGCTGCCTTTGCCTCCTGAGACTGGGGGACTAAAGGCACCACCA | + |
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Preference number: 1 (lower is better) Translates to: GRVSLYSPGWPGTQI*LPLPPETGGLKAPP Trigger: TGGTGGTGCCTTTAGTCCCCCAGTCTCAGGAGGCAAAGGCAGGCAGATCTGAGTTCCAGGCCAGCCAGGGCTATACAGTGAGACCCTACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
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| 3UTR GCA 90 bp | TGTGTGTGTGGTGTGTGTGGGCACGTGCAGGTCAGACACACTCCTTaGCTGGCACCTTGTCGGAGATGGTGGTCTCTCCTGTCCACCTCT | + |
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Preference number: 1 (lower is better) Translates to: CVCGVCGHVQVRHTP*LAPCRRWWSLLSTS Trigger: AGAGGTGGACAGGAGAGACCACCATCTCCGACAAGGTGCCAGGCAAGGAGTGTGTCTGACCTGCACGTGCCCACACACACCACACACACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
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| 3UTR CCA 90 bp | GCGGATGTGTGTGGGTGTGCATGTGGTCAGAGGGCCTGCACAGTGTaGACCCTCACTGGTCTCTGGCCCAGACTGAACCGTTTGTATCAC | + |
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Preference number: 1 (lower is better) Translates to: ADVCGCACGQRACTV*TLTGLWPRLNRLYH Trigger: GTGATACAAACGGTTCAGTCTGGGCCAGAGACCAGTGAGGGTCCACACTGTGCAGGCCCTCTGACCACATGCACACCCACACACATCCGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
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| 3UTR GCA 90 bp | CTTCCTACCATGCCTCAGGTCTGCGGGATTAGAGGCATGGGCTGCTaGGAGGCTTTCACATGGGTTCAGAGGAAACCAGCTTTGGGCCTC | + |
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Preference number: 1 (lower is better) Translates to: LPTMPQVCGIRGMGC*EAFTWVQRKPALGL Trigger: GAGGCCCAAAGCTGGTTTCCTCTGAACCCATGTGAAAGCCTCGCAGCAGCCCATGCCTCTAATCCCGCAGACCTGAGGCATGGTAGGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
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| 3UTR GCA 90 bp | TTCCTACTGATAGACCACGCTAGCTGTCCTGTGGGCTTCCTACCATaGCTCAGGTCTGCGGGATTAGAGGCATGGGCTGCTGCGAGGCTT | + |
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Preference number: 1 (lower is better) Translates to: FLLIDHASCPVGFLP*LRSAGLEAWAAARL Trigger: AAGCCTCGCAGCAGCCCATGCCTCTAATCCCGCAGACCTGAGGCATGGTAGGAAGCCCACAGGACAGCTAGCGTGGTCTATCAGTAGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
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| 3UTR CCA 90 bp | GCATGTGGTCAGAGGGCCTGCACAGTGTGGACCCTCACTGGTCTCTaGCCCAGACTGAACCGTTTGTATCACAAGGGTCCTCTTCACAGC | + |
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Preference number: 1 (lower is better) Translates to: ACGQRACTVWTLTGL*PRLNRLYHKGPLHS Trigger: GCTGTGAAGAGGACCCTTGTGATACAAACGGTTCAGTCTGGGCCAGAGACCAGTGAGGGTCCACACTGTGCAGGCCCTCTGACCACATGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
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| 3UTR CCA 90 bp | TGTAGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTaGTGTGTGTGGGCACGTGCAGGTCAGACACACTCCTTGCCTGGC | + |
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Preference number: 1 (lower is better) Translates to: CSVCVCVCVCVCVCV*CVWARAGQTHSLPG Trigger: GCCAGGCAAGGAGTGTGTCTGACCTGCACGTGCCCACACACACCACACACACACACACACACACACACACACACACACACACACGCTACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
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| 3UTR TCA 90 bp | GAAGCTTCACCCACTACTGATATGCTGGTGGCCTCTGGAGATGGTTaGCTAGGGTCAGGAGATCAAGAGGGCTATAGTGGCCTGGTGGCC | + |
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Preference number: 1 (lower is better) Translates to: EASPTTDMLVASGDG*LGSGDQEGYSGLVA Trigger: GGCCACCAGGCCACTATAGCCCTCTTGATCTCCTGACCCTAGTCAACCATCTCCAGAGGCCACCAGCATATCAGTAGTGGGTGAAGCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
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| 3UTR CCA 90 bp | CAGGTCTGCGGGATTAGAGGCATGGGCTGCTGCGAGGCTTTCACATaGGTTCAGAGGAAACCAGCTTTGGGCCTCACTTTCACAAGCATC | + |
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Preference number: 1 (lower is better) Translates to: QVCGIRGMGCCEAFT*VQRKPALGLTFTSI Trigger: GATGCTTGTGAAAGTGAGGCCCAAAGCTGGTTTCCTCTGAACCCATGTGAAAGCCTCGCAGCAGCCCATGCCTCTAATCCCGCAGACCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
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| 3UTR GCA 90 bp | CATTTCAGAAGGAGTCAGGCATATGCTAGTGGCCATCTGGTTGCTTaGTCCCTGGGCCAGCAAATGGGTCCATCCTTGGTCCCTAAGGGA | + |
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Preference number: 1 (lower is better) Translates to: HFRRSQAYASGHLVA*SLGQQMGPSLVPKG Trigger: TCCCTTAGGGACCAAGGATGGACCCATTTGCTGGCCCAGGGAGCAAGCAACCAGATGGCCACTAGCATATGCCTGACTCCTTCTGAAATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
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| 3UTR CCA 90 bp | GAGTATTCCATTTCAGAAGGAGTCAGGCATATGCTAGTGGCCATCTaGTTGCTTGCTCCCTGGGCCAGCAAATGGGTCCATCCTTGGTCC | + |
|
Preference number: 1 (lower is better) Translates to: EYSISEGVRHMLVAI*LLAPWASKWVHPWS Trigger: GGACCAAGGATGGACCCATTTGCTGGCCCAGGGAGCAAGCAACCAGATGGCCACTAGCATATGCCTGACTCCTTCTGAAATGGAATACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
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| 3UTR GCA 90 bp | CCAGGCAATGGCATCAGTCTGAAACCTACTGAGCGATTGTTCAGCTaGCGGCAGCTCTTGTTTACTTCTGTGGCTTTCAGGACACTAGGA | + |
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Preference number: 1 (lower is better) Translates to: PGNGISLKPTERLFS*RQLLFTSVAFRTLG Trigger: TCCTAGTGTCCTGAAAGCCACAGAAGTAAACAAGAGCTGCCGGCAGCTGAACAATCGCTCAGTAGGTTTCAGACTGATGCCATTGCCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118115.2 ENSMUST00000118310.8 |
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| 3UTR CCA 90 bp | GTATGGGATGAAATTCAGCTCCAGCCTCTTAGCACTCAGTTGTCCTaGTCACCAAAAAGCCTCGGGTGCAGGATCTACACAGTGCCTTGT | + |
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Preference number: 1 (lower is better) Translates to: VWDEIQLQPLSTQLS*SPKSLGCRIYTVPC Trigger: ACAAGGCACTGTGTAGATCCTGCACCCGAGGCTTTTTGGTGACCAGGACAACTGAGTGCTAAGAGGCTGGAGCTGAATTTCATCCCATAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054442.11 ENSMUST00000118310.8 |
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| 3UTR TCA 90 bp | GTTAAGGACTGGAATCACTGGCCGGAACCCTGTTTAAAAATTGATTaGCTTCCTGTGTGGCTGTGTGTGGGTGTGGGATGTGTGTGTGCG | + |
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Preference number: 1 (lower is better) Translates to: VKDWNHWPEPCLKID*LPVWLCVGVGCVCA Trigger: CGCACACACACATCCCACACCCACACACAGCCACACAGGAAGTCAATCAATTTTTAAACAGGGTTCCGGCCAGTGATTCCAGTCCTTAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
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| 3UTR CCA 90 bp | TATGAGCACACTGTAGCTGTCTTCAGACACACCAAAAGAGGGCATTaGCTCTCATTACAGATAGCTGTGAGCCACCATGTGGTTGCTGGG | + |
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Preference number: 1 (lower is better) Translates to: YEHTVAVFRHTKRGH*LSLQIAVSHHVVAG Trigger: CCCAGCAACCACATGGTGGCTCACAGCTATCTGTAATGAGAGCCAATGCCCTCTTTTGGTGTGTCTGAAGACAGCTACAGTGTGCTCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054442.11 ENSMUST00000118310.8 |
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| 3UTR CCA 90 bp | TTGTTATTTAGGGTAATGGACCCGTTTAAGCACTGTGGCTTGATCTaGGTGAGAGCTCTGACTAGGCAGATCACACTTGGTGCTTGCAGC | + |
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Preference number: 1 (lower is better) Translates to: LLFRVMDPFKHCGLI*VRALTRQITLGACS Trigger: GCTGCAAGCACCAAGTGTGATCTGCCTAGTCAGAGCTCTCACCCAGATCAAGCCACAGTGCTTAAACGGGTCCATTACCCTAAATAACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
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| 3UTR CCA 90 bp | CTCCTCAGTTCACCCGAGCACGTGAGGGCACTCATAAGAGACAAATaGGGTCCTTCATCTTGGAGTAGGACTGAACATGGTATTTTACAG | + |
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Preference number: 1 (lower is better) Translates to: LLSSPEHVRALIRDK*GPSSWSRTEHGILQ Trigger: CTGTAAAATACCATGTTCAGTCCTACTCCAAGATGAAGGACCCCATTTGTCTCTTATGAGTGCCCTCACGTGCTCGGGTGAACTGAGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
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| 3UTR CCA 90 bp | AGAAGAGAGTCACGTGTTTATGAATGTCTCCTCACTCTCAGCGTGTaGTGTCTCTATCATAACGCAGCAGCAAGGCCTTTGCCAGTCACA | + |
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Preference number: 1 (lower is better) Translates to: RRESRVYECLLTLSV*CLYHNAAARPLPVT Trigger: TGTGACTGGCAAAGGCCTTGCTGCTGCGTTATGATAGAGACACCACACGCTGAGAGTGAGGAGACATTCATAAACACGTGACTCTCTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
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| 3UTR GCA 90 bp | AGGTGTAGCTGTTACTGCAGCGACCAACTTCTCTATTATTATTATTaGTGGGATTTAAGACCTGCTCCATGGGATGGAACCCACGGTGAG | + |
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Preference number: 1 (lower is better) Translates to: RCSCYCSDQLLYYYY*WDLRPAPWDGTHGE Trigger: CTCACCGTGGGTTCCATCCCATGGAGCAGGTCTTAAATCCCAGCAATAATAATAATAGAGAAGTTGGTCGCTGCAGTAACAGCTACACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118115.2 |
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| 3UTR CCA 90 bp | TGTAGCTGTTACTGCAGCGACCAACTTCTCTATTATTATTATTGCTaGGATTTAAGACCTGCTCCATGGGATGGAACCCACGGTGAGGTC | + |
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Preference number: 1 (lower is better) Translates to: CSCYCSDQLLYYYYC*DLRPAPWDGTHGEV Trigger: GACCTCACCGTGGGTTCCATCCCATGGAGCAGGTCTTAAATCCCAGCAATAATAATAATAGAGAAGTTGGTCGCTGCAGTAACAGCTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118115.2 |
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| 3UTR TCA 90 bp | CACCGTGTTCTCAGAACTGTTTCCTCAATGACTGTTTTCTCTGTATaGACTGAAACCATGACCATGAATTCCCTCTTGCTCTGCACACGG | + |
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Preference number: 1 (lower is better) Translates to: HRVLRTVSSMTVFSV*TETMTMNSLLLCTR Trigger: CCGTGTGCAGAGCAAGAGGGAATTCATGGTCATGGTTTCAGTTCATACAGAGAAAACAGTCATTGAGGAAACAGTTCTGAGAACACGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
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| 3UTR GCA 90 bp | GGTCCTTCATCTTGGAGTAGGACTGAACATGGTATTTTACAGCTTTaGCAGAGAACAATCAGCAAAGGATACAGCAGGTCTACTTTCCCC | + |
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Preference number: 1 (lower is better) Translates to: GPSSWSRTEHGILQL*QRTISKGYSRSTFP Trigger: GGGGAAAGTAGACCTGCTGTATCCTTTGCTGATTGTTCTCTGGCAAAGCTGTAAAATACCATGTTCAGTCCTACTCCAAGATGAAGGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
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| 3UTR TCA 90 bp | GACAGATTTCTAATAAAATTTCTTGGCCAGGCAATGGCATCAGTCTaGAACCTACTGAGCGATTGTTCAGCTGCCGGCAGCTCTTGTTTA | + |
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Preference number: 1 (lower is better) Translates to: DRFLIKFLGQAMASV*NLLSDCSAAGSSCL Trigger: TAAACAAGAGCTGCCGGCAGCTGAACAATCGCTCAGTAGGTTTCAGACTGATGCCATTGCCTGGCCAAGAAATTTTATTAGAAATCTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054442.11 ENSMUST00000118115.2 ENSMUST00000118310.8 |
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| 3UTR TCA 90 bp | TCAGATACACAAAAAGAGGGCATCAGATACAATTACAGATTGTTGTaGGCCACTATGTGGTTGCTGGGAATTGAACTCGGGACCTCTGGA | + |
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Preference number: 1 (lower is better) Translates to: SDTQKEGIRYNYRLL*ATMWLLGIELGTSG Trigger: TCCAGAGGTCCCGAGTTCAATTCCCAGCAACCACATAGTGGCTCACAACAATCTGTAATTGTATCTGATGCCCTCTTTTTGTGTATCTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118115.2 |
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| 3UTR TCA 90 bp | TGTTCTCAGAACTGTTTCCTCAATGACTGTTTTCTCTGTATGAACTaGAACCATGACCATGAATTCCCTCTTGCTCTGCACACGGGCTCT | + |
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Preference number: 1 (lower is better) Translates to: CSQNCFLNDCFLCMN*NHDHEFPLALHTGS Trigger: AGAGCCCGTGTGCAGAGCAAGAGGGAATTCATGGTCATGGTTTCAGTTCATACAGAGAAAACAGTCATTGAGGAAACAGTTCTGAGAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
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| 3UTR CCA 90 bp | CTACGGCGGACATTCTTAAATACATGTGCTTCCATCGGTTCCCTATaGAAGATCGGGATTGGCCCCATACTTTTAATTTCTGATCATTTG | + |
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Preference number: 1 (lower is better) Translates to: LRRTFLNTCASIGSL*KIGIGPILLISDHL Trigger: CAAATGATCAGAAATTAAAAGTATGGGGCCAATCCCGATCTTCCATAGGGAACCGATGGAAGCACATGTATTTAAGAATGTCCGCCGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
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| 3UTR CCA 90 bp | TTGAATGTAATTCTGATTATTGCCACATCTATCACCTACTCAGTGTaGTTCATCACAATTACACTGGGAGATCATGAATTCCACTTTGCT | + |
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Preference number: 1 (lower is better) Translates to: LNVILIIATSITYSV*FITITLGDHEFHFA Trigger: AGCAAAGTGGAATTCATGATCTCCCAGTGTAATTGTGATGAACCACACTGAGTAGGTGATAGATGTGGCAATAATCAGAATTACATTCAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
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| 3UTR CAA 90 bp | TCACTGTATAGCCCTGGCTGGCCTGGAACTCAGATCTGCCTGCCTTaGCCTCCTGAGACTGGGGGACTAAAGGCACCACCACGGCCAGCT | + |
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Preference number: 2 (lower is better) Translates to: SLYSPGWPGTQICLP*PPETGGLKAPPRPA Trigger: AGCTGGCCGTGGTGGTGCCTTTAGTCCCCCAGTCTCAGGAGGCAAAGGCAGGCAGATCTGAGTTCCAGGCCAGCCAGGGCTATACAGTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
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| 3UTR CAA 90 bp | GTGTGTGTGTGGTGTGTGTGGGCACGTGCAGGTCAGACACACTCCTaGCCTGGCACCTTGTCGGAGATGGTGGTCTCTCCTGTCCACCTC | + |
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Preference number: 2 (lower is better) Translates to: VCVWCVWARAGQTHS*PGTLSEMVVSPVHL Trigger: GAGGTGGACAGGAGAGACCACCATCTCCGACAAGGTGCCAGGCAAGGAGTGTGTCTGACCTGCACGTGCCCACACACACCACACACACAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
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| 3UTR-3UTR CCA 90 bp | CAGTCCCTGTCAGGCCTCTCTACCCGCTGCTCCAGAATGCAGTGGGGCTTCCTGCTGTATAGCCCTGGCTaGCCTGGAACTCAGATCTGC | + |
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Preference number: 2 (lower is better) Translates to: QSLSGLSTRCSRMQWGFLLYSPG*PGTQIC Trigger: GCAGATCTGAGTTCCAGGCCAGCCAGGGCTATACAG...CAGGAAGCCCCACTGCATTCTGGAGCAGCGGGTAGAGAGGCCTGACAGGGACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
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| 3UTR-3UTR CCA 90 bp | CAGTCCCTGTCAGGCCTCTCTACCCGCTGCTCCAGAATGCAGTGGGGCTTCCTGGCACCAGCCCAACCCTaGGGCCAAAGAAGAGAGTAT | + |
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Preference number: 2 (lower is better) Translates to: QSLSGLSTRCSRMQWGFLAPAQP*GQRREY Trigger: ATACTCTCTTCTTTGGCCCCAGGGTTGGGCTGGTGC...CAGGAAGCCCCACTGCATTCTGGAGCAGCGGGTAGAGAGGCCTGACAGGGACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
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| 3UTR-3UTR TCA 90 bp | CAGCTCCAGCCTCTTAGCACTCAGTTGTCCTGGTCACCAAAAAGCCTCGGGTGCCATTTCGGCTGGCCTTaGATTCAGGGATTCTCCGCC | + |
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Preference number: 2 (lower is better) Translates to: QLQPLSTQLSWSPKSLGCHFGWP*IQGFSA Trigger: GGCGGAGAATCCCTGAATTCAAGGCCAGCCGAAATG...GCACCCGAGGCTTTTTGGTGACCAGGACAACTGAGTGCTAAGAGGCTGGAGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054442.11 ENSMUST00000118310.8 |
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| 3UTR-3UTR TCA 90 bp | AGGGCAGGATCCCTTGTGAACTACCCTACCATGTGGGTGCTGAGAACTGAGCCCCATTTCGGCTGGCCTTaGATTCAGGGATTCTCCGCC | + |
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Preference number: 2 (lower is better) Translates to: RAGSLVNYPTMWVLRTEPHFGWP*IQGFSA Trigger: GGCGGAGAATCCCTGAATTCAAGGCCAGCCGAAATG...GGGCTCAGTTCTCAGCACCCACATGGTAGGGTAGTTCACAAGGGATCCTGCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054442.11 ENSMUST00000118310.8 |
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| 3UTR-3UTR TCA 90 bp | TCCAGCCTCTTAGCACTCAGTTGTCCTGGTCACCAAAAAGCCTCGGGTGCAGGACTACCATGTGGGTGCTaGGAACTGAGCCCCAATCCT | + |
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Preference number: 2 (lower is better) Translates to: SSLLALSCPGHQKASGAGLPCGC*ELSPNP Trigger: AGGATTGGGGCTCAGTTCTCAGCACCCACATGGTAG...TCCTGCACCCGAGGCTTTTTGGTGACCAGGACAACTGAGTGCTAAGAGGCTGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054442.11 ENSMUST00000118310.8 |
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| 3UTR CAA 90 bp | ATGGGCTGCTGCGAGGCTTTCACATGGGTTCAGAGGAAACCAGCTTaGGGCCTCACTTTCACAAGCATCTCATCGGCTAAGGAATCTCCC | + |
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Preference number: 2 (lower is better) Translates to: MGCCEAFTWVQRKPA*GLTFTSISSAKESP Trigger: GGGAGATTCCTTAGCCGATGAGATGCTTGTGAAAGTGAGGCCCAAAGCTGGTTTCCTCTGAACCCATGTGAAAGCCTCGCAGCAGCCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
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| 3UTR-3UTR TCA 90 bp | TCCAGCCTCTTAGCACTCAGTTGTCCTGGTCACCAAAAAGCCTCGGGTGCAGGATCTCCAGCCCTAGGCTaGGATTTTAACCAGTGTCCT | + |
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Preference number: 2 (lower is better) Translates to: SSLLALSCPGHQKASGAGSPALG*DFNQCP Trigger: AGGACACTGGTTAAAATCTCAGCCTAGGGCTGGAGA...TCCTGCACCCGAGGCTTTTTGGTGACCAGGACAACTGAGTGCTAAGAGGCTGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054442.11 ENSMUST00000118310.8 |
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| 3UTR-3UTR TCA 90 bp | GTTCAGCTGCCGGCAGCTCTTGTTTACTTCTGTGGCTTTCAGGACACTAGGACTTGGAAGAGCAGTCAATaGGCCATCTCTCCAGCCCTC | + |
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Preference number: 2 (lower is better) Translates to: VQLPAALVYFCGFQDTRTWKSSQ*AISPAL Trigger: GAGGGCTGGAGAGATGGCTCATTGACTGCTCTTCCA...AGTCCTAGTGTCCTGAAAGCCACAGAAGTAAACAAGAGCTGCCGGCAGCTGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118115.2 |
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| 3UTR-3UTR TCA 90 bp | CAGTCCCTGTCAGGCCTCTCTACCCGCTGCTCCAGAATGCAGTGGGGCTTCCTGACAGCCTCCAGCCTGTaGGAAATAGATATTAATTAC | + |
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Preference number: 2 (lower is better) Translates to: QSLSGLSTRCSRMQWGFLTASSL*EIDINY Trigger: GTAATTAATATCTATTTCTCACAGGCTGGAGGCTGT...CAGGAAGCCCCACTGCATTCTGGAGCAGCGGGTAGAGAGGCCTGACAGGGACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
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| 3UTR-3UTR TCA 90 bp | CAGTCCCTGTCAGGCCTCTCTACCCGCTGCTCCAGAATGCAGTGGGGCTTCCTGACCCTGTTTAAAAATTaGTTGACTTCCTGTGTGGCT | + |
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Preference number: 2 (lower is better) Translates to: QSLSGLSTRCSRMQWGFLTLFKN*LTSCVA Trigger: AGCCACACAGGAAGTCAATCAATTTTTAAACAGGGT...CAGGAAGCCCCACTGCATTCTGGAGCAGCGGGTAGAGAGGCCTGACAGGGACTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
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| 3UTR CAA 90 bp | TATTCCATTTCAGAAGGAGTCAGGCATATGCTAGTGGCCATCTGGTaGCTTGCTCCCTGGGCCAGCAAATGGGTCCATCCTTGGTCCCTA | + |
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Preference number: 2 (lower is better) Translates to: YSISEGVRHMLVAIW*LAPWASKWVHPWSL Trigger: TAGGGACCAAGGATGGACCCATTTGCTGGCCCAGGGAGCAAGCAACCAGATGGCCACTAGCATATGCCTGACTCCTTCTGAAATGGAATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
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| 3UTR-3UTR TCA 90 bp | CACCAAAAGAGGGCATTGGCTCTCATTACAGATAGCTGTGAGCCACCATGTGGTTTCTCTGTGCAGCCCTaGCTGTCCTGGAACTCACTC | + |
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Preference number: 2 (lower is better) Translates to: HQKRALALITDSCEPPCGFSVQP*LSWNSL Trigger: GAGTGAGTTCCAGGACAGTCAGGGCTGCACAGAGAA...ACCACATGGTGGCTCACAGCTATCTGTAATGAGAGCCAATGCCCTCTTTTGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054442.11 ENSMUST00000118310.8 |
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| 3UTR-3UTR GCA 90 bp | CGTGTATGGGATGAAATTCAGCTCCAGCCTCTTAGCACTCAGTTGTCCTGGTCAGACAGGGTTTCTCTGTaGAGCCCTGACTGTCCTGGA | + |
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Preference number: 2 (lower is better) Translates to: RVWDEIQLQPLSTQLSWSDRVSL*SPDCPG Trigger: TCCAGGACAGTCAGGGCTGCACAGAGAAACCCTGTC...TGACCAGGACAACTGAGTGCTAAGAGGCTGGAGCTGAATTTCATCCCATACACG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054442.11 ENSMUST00000118310.8 |
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| 3UTR-3UTR CCA 90 bp | GTTCAGCTGCCGGCAGCTCTTGTTTACTTCTGTGGCTTTCAGGACACTAGGACTCCTCAAGCTTGGACCTaGGAGATCTGGGACACAACT | + |
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Preference number: 2 (lower is better) Translates to: VQLPAALVYFCGFQDTRTPQAWT*EIWDTT Trigger: AGTTGTGTCCCAGATCTCCCAGGTCCAAGCTTGAGG...AGTCCTAGTGTCCTGAAAGCCACAGAAGTAAACAAGAGCTGCCGGCAGCTGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118115.2 |
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| 3UTR-3UTR TCA 90 bp | GATGAAATTCAGCTCCAGCCTCTTAGCACTCAGTTGTCCTGGTCACCAAAAAGCCTACCATGTGGGTGCTaGGAACTGAGCCCCAATCCT | + |
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Preference number: 2 (lower is better) Translates to: DEIQLQPLSTQLSWSPKSLPCGC*ELSPNP Trigger: AGGATTGGGGCTCAGTTCTCAGCACCCACATGGTAG...GCTTTTTGGTGACCAGGACAACTGAGTGCTAAGAGGCTGGAGCTGAATTTCATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054442.11 ENSMUST00000118310.8 |
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| 3UTR-3UTR CCA 90 bp | AGTGTAAGCCAGGCAAATGTTTGTTACCTCAAGCTTGGACCTGGGAGATCTGGGTTAAGACCTGCTCCATaGGATGGAACCCACGGTGAG | + |
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Preference number: 2 (lower is better) Translates to: SVSQANVCYLKLGPGRSGLRPAP*DGTHGE Trigger: CTCACCGTGGGTTCCATCCCATGGAGCAGGTCTTAA...CCCAGATCTCCCAGGTCCAAGCTTGAGGTAACAAACATTTGCCTGGCTTACACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118115.2 |
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| 3UTR-3UTR CCA 90 bp | GTTCAGCTGCCGGCAGCTCTTGTTTACTTCTGTGGCTTTCAGGACACTAGGACTCGAGCGATGACTTGGTaGTTAAGAGCACTTACGGCT | + |
|
Preference number: 2 (lower is better) Translates to: VQLPAALVYFCGFQDTRTRAMTW*LRALTA Trigger: AGCCGTAAGTGCTCTTAACCACCAAGTCATCGCTCG...AGTCCTAGTGTCCTGAAAGCCACAGAAGTAAACAAGAGCTGCCGGCAGCTGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118115.2 |
||
| 3UTR CAA 90 bp | ATCAGTCTGAAACCTACTGAGCGATTGTTCAGCTGCCGGCAGCTCTaGTTTACTTCTGTGGCTTTCAGGACACTAGGACTTGCTGAACCT | + |
|
Preference number: 2 (lower is better) Translates to: ISLKPTERLFSCRQL*FTSVAFRTLGLAEP Trigger: AGGTTCAGCAAGTCCTAGTGTCCTGAAAGCCACAGAAGTAAACAAGAGCTGCCGGCAGCTGAACAATCGCTCAGTAGGTTTCAGACTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118115.2 ENSMUST00000118310.8 |
||
| 3UTR-3UTR TCA 90 bp | AGTGTAAGCCAGGCAAATGTTTGTTACCTCAAGCTTGGACCTGGGAGATCTGGGCCAACACACTGTCAGTaGTCAAACTGCTCAACAGCT | + |
|
Preference number: 2 (lower is better) Translates to: SVSQANVCYLKLGPGRSGPTHCQ*SNCSTA Trigger: AGCTGTTGAGCAGTTTGATCACTGACAGTGTGTTGG...CCCAGATCTCCCAGGTCCAAGCTTGAGGTAACAAACATTTGCCTGGCTTACACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118115.2 |
||
| 3UTR-3UTR TCA 90 bp | ACATGGTATTTTACAGCTTTGCCAGAGAACAATCAGCAAAGGATACAGCAGGTCGTGACCGACAGCCTCTaGACAGTCACTGGAGTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: TWYFTALPENNQQRIQQVVTDSL*TVTGVL Trigger: CAGCACTCCAGTGACTGTTCAGAGGCTGTCGGTCAC...GACCTGCTGTATCCTTTGCTGATTGTTCTCTGGCAAAGCTGTAAAATACCATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
||
| 3UTR-3UTR TCA 90 bp | TGTATAGCCCTGGCTGGCCTGGAACTCAGATCTGCCTGCCTTTGCCTCCTGAGAACCACGGCCAGCTATTaGATGGTTTTTAAAAATAGA | + |
|
Preference number: 2 (lower is better) Translates to: CIALAGLELRSACLCLLRTTASY*MVFKNR Trigger: TCTATTTTTAAAAACCATTCAATAGCTGGCCGTGGT...TCTCAGGAGGCAAAGGCAGGCAGATCTGAGTTCCAGGCCAGCCAGGGCTATACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTGGCACCAGCCCAACCCTGGGGCCAAAGAAGAGAGTATTCCATTTCAGAAGGCTCATAAGAGACAAATaGGGTCCTTCATCTTGGAGT | + |
|
Preference number: 2 (lower is better) Translates to: SGTSPTLGPKKRVFHFRRLIRDK*GPSSWS Trigger: ACTCCAAGATGAAGGACCCCATTTGTCTCTTATGAG...CCTTCTGAAATGGAATACTCTCTTCTTTGGCCCCAGGGTTGGGCTGGTGCCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
||
| 3UTR-3UTR TCA 90 bp | ATCTCAAGGATGTCGCATGTCCTCTGGAGGAGCTCGAACTCATTCCTTATGTTGAGCACCTTTACCTGCTaGGCCATCTTGCTGGAAATA | + |
|
Preference number: 2 (lower is better) Translates to: ISRMSHVLWRSSNSFLMLSTFTC*AILLEI Trigger: TATTTCCAGCAAGATGGCTCAGCAGGTAAAGGTGCT...CAACATAAGGAATGAGTTCGAGCTCCTCCAGAGGACATGCGACATCCTTGAGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
||
| 3UTR-3UTR GCA 90 bp | TCCAGCCTCTTAGCACTCAGTTGTCCTGGTCACCAAAAAGCCTCGGGTGCAGGATGTGTATGGATATTTTaGCTGCAGTATGTATGCATG | + |
|
Preference number: 2 (lower is better) Translates to: SSLLALSCPGHQKASGAGCVWIF*LQYVCM Trigger: CATGCATACATACTGCAGGCAAAATATCCATACACA...TCCTGCACCCGAGGCTTTTTGGTGACCAGGACAACTGAGTGCTAAGAGGCTGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054442.11 ENSMUST00000118310.8 |
||
| 3UTR-3UTR CCA 90 bp | TCCAGCCTCTTAGCACTCAGTTGTCCTGGTCACCAAAAAGCCTCGGGTGCAGGATGGCTACATGTTCAGTaGAATGGATTCAATGAGATT | + |
|
Preference number: 2 (lower is better) Translates to: SSLLALSCPGHQKASGAGWLHVQ*NGFNEI Trigger: AATCTCATTGAATCCATTCCACTGAACATGTAGCCA...TCCTGCACCCGAGGCTTTTTGGTGACCAGGACAACTGAGTGCTAAGAGGCTGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054442.11 ENSMUST00000118310.8 |
||
| 3UTR-3UTR GCA 90 bp | CGAGCGATGACTTGGTGGTTAAGAGCACTTACGGCTCTTGCAGAGGATCTGGGTACATTTAGAATCCAATaGTTTCTTCTGTCCTTAGGC | + |
|
Preference number: 2 (lower is better) Translates to: RAMTWWLRALTALAEDLGTFRIQ*FLLSLG Trigger: GCCTAAGGACAGAAGAAAGCATTGGATTCTAAATGT...ACCCAGATCCTCTGCAAGAGCCGTAAGTGCTCTTAACCACCAAGTCATCGCTCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118115.2 |
||
| 3UTR-3UTR CCA 90 bp | ACATGGTATTTTACAGCTTTGCCAGAGAACAATCAGCAAAGGATACAGCAGGTCCACTGTGGCTTGATCTaGGTGAGAGCTCTGACTAGG | + |
|
Preference number: 2 (lower is better) Translates to: TWYFTALPENNQQRIQQVHCGLI*VRALTR Trigger: CCTAGTCAGAGCTCTCACCCAGATCAAGCCACAGTG...GACCTGCTGTATCCTTTGCTGATTGTTCTCTGGCAAAGCTGTAAAATACCATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
||
| 3UTR-3UTR TCA 90 bp | TTATTTATTGTATATGAGCACACTGTAGCTGTCTTCAGACACACCAAAAGAGGGTTCTCTGTGCAGCCCTaGCTGTCCTGGAACTCACTC | + |
|
Preference number: 2 (lower is better) Translates to: LFIVYEHTVAVFRHTKRGFSVQP*LSWNSL Trigger: GAGTGAGTTCCAGGACAGTCAGGGCTGCACAGAGAA...CCCTCTTTTGGTGTGTCTGAAGACAGCTACAGTGTGCTCATATACAATAAATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054442.11 ENSMUST00000118310.8 |
||
| 3UTR-3UTR TCA 90 bp | GTTCAGCTGCCGGCAGCTCTTGTTTACTTCTGTGGCTTTCAGGACACTAGGACTCATATGTTGATTCTCTaGAAACAAAATGACCCAGCT | + |
|
Preference number: 2 (lower is better) Translates to: VQLPAALVYFCGFQDTRTHMLIL*KQNDPA Trigger: AGCTGGGTCATTTTGTTTTCAGAGAATCAACATATG...AGTCCTAGTGTCCTGAAAGCCACAGAAGTAAACAAGAGCTGCCGGCAGCTGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118310.8 |
||
| 3UTR-3UTR GCA 90 bp | TTATTTATTGTATATGAGCACACTGTAGCTGTCTTCAGACACACCAAAAGAGGGGACAGGGTTTCTCTGTaGAGCCCTGACTGTCCTGGA | + |
|
Preference number: 2 (lower is better) Translates to: LFIVYEHTVAVFRHTKRGDRVSL*SPDCPG Trigger: TCCAGGACAGTCAGGGCTGCACAGAGAAACCCTGTC...CCCTCTTTTGGTGTGTCTGAAGACAGCTACAGTGTGCTCATATACAATAAATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054442.11 ENSMUST00000118310.8 |
||
| 3UTR-3UTR GCA 90 bp | CCCAATCTTTGTTATATACACACAGCGATACACTGCTTTGGCTGGCTTTTCAAACCAAAAAGCCTCGGGTaGAGGATCTACACAGTGCCT | + |
|
Preference number: 2 (lower is better) Translates to: PNLCYIHTAIHCFGWLFKPKSLG*RIYTVP Trigger: AGGCACTGTGTAGATCCTGCACCCGAGGCTTTTTGG...TTTGAAAAGCCAGCCAAAGCAGTGTATCGCTGTGTGTATATAACAAAGATTGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054442.11 ENSMUST00000118310.8 |
||
| 3UTR-3UTR CCA 90 bp | GTGTATGGGATGAAATTCAGCTCCAGCCTCTTAGCACTCAGTTGTCCTGGTCACAACCAGTGTCCTTTCTaGTGGACATTTAGGGTAATT | + |
|
Preference number: 2 (lower is better) Translates to: VYGMKFSSSLLALSCPGHNQCPF*WTFRVI Trigger: AATTACCCTAAATGTCCACCAGAAAGGACACTGGTT...GTGACCAGGACAACTGAGTGCTAAGAGGCTGGAGCTGAATTTCATCCCATACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054442.11 ENSMUST00000118310.8 |
||
| 3UTR-3UTR CCA 90 bp | CGAACTCATTCCTTATGTTGGTGTCGTATTTTACTGAAGGAGTATAGCTTATTTGCAGGTGTGACGCTTTaGGTCAGTCCCTGTCAGGCC | + |
|
Preference number: 2 (lower is better) Translates to: RTHSLCWCRILLKEYSLFAGVTL*VSPCQA Trigger: GGCCTGACAGGGACTGACCCAAAGCGTCACACCTGC...AAATAAGCTATACTCCTTCAGTAAAATACGACACCAACATAAGGAATGAGTTCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
||
| 3UTR-3UTR TCA 90 bp | TGGTTGGTGTCAGTCTCTACCATATATTCTTTATGGGAAAGGTCAATGAAAATTGGATGGAACCCACGGTaGGGTCGAACTGCTAGGAGT | + |
|
Preference number: 2 (lower is better) Translates to: WLVSVSTIYSLWERSMKIGWNPR*GRTARS Trigger: ACTCCTAGCAGTTCGACCTCACCGTGGGTTCCATCC...AATTTTCATTGACCTTTCCCATAAAGAATATATGGTAGAGACTGACACCAACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118115.2 |
||
| 3UTR-3UTR TCA 90 bp | ATCTCAAGGATGTCGCATGTCCTCTGGAGGAGCTCGAACTCATTCCTTATGTTGTATCCTCTAAGTGAATaGTTTGTGTTTGCTTGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: ISRMSHVLWRSSNSFLMLYPLSE*FVFAWR Trigger: CCTCCAAGCAAACACAAATCATTCACTTAGAGGATA...CAACATAAGGAATGAGTTCGAGCTCCTCCAGAGGACATGCGACATCCTTGAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
||
| 3UTR-3UTR GCA 90 bp | TTGTTATATACACACAGCGATACACTGCTTTGGCTGGCTTTTCAAAATAGCGTGTCCTGGAACTCACTCTaGATTTCGGCTGGCCTTGAA | + |
|
Preference number: 2 (lower is better) Translates to: LLYTHSDTLLWLAFQNSVSWNSL*ISAGLE Trigger: TTCAAGGCCAGCCGAAATGCAGAGTGAGTTCCAGGA...CACGCTATTTTGAAAAGCCAGCCAAAGCAGTGTATCGCTGTGTGTATATAACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054442.11 ENSMUST00000118310.8 |
||
| 3UTR-3UTR GCA 90 bp | CGAACTCATTCCTTATGTTGGTGTCGTATTTTACTGAAGGAGTATAGCTTATTTGGCCATCTGGTTGCTTaGTCCCTGGGCCAGCAAATG | + |
|
Preference number: 2 (lower is better) Translates to: RTHSLCWCRILLKEYSLFGHLVA*SLGQQM Trigger: CATTTGCTGGCCCAGGGAGCAAGCAACCAGATGGCC...AAATAAGCTATACTCCTTCAGTAAAATACGACACCAACATAAGGAATGAGTTCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGCTTTGGCTGGCTTTTCAAAATAGCGTGTATGGGATGAAATTCAGCTCCAGCACCAAAAGAGGGCATTaGCTCTCATTACAGATAGCT | + |
|
Preference number: 2 (lower is better) Translates to: LLWLAFQNSVYGMKFSSSTKRGH*LSLQIA Trigger: AGCTATCTGTAATGAGAGCCAATGCCCTCTTTTGGT...GCTGGAGCTGAATTTCATCCCATACACGCTATTTTGAAAAGCCAGCCAAAGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000054442.11 ENSMUST00000118310.8 |
||
| 3UTR-3UTR GCA 90 bp | TTATTTATTGTATATGAGCACACTGTAGCTGTCTTCAGACACACCAAAAGAGGGTCCTGGAACTCACTCTaGATTTCGGCTGGCCTTGAA | + |
|
Preference number: 2 (lower is better) Translates to: LFIVYEHTVAVFRHTKRGSWNSL*ISAGLE Trigger: TTCAAGGCCAGCCGAAATGCAGAGTGAGTTCCAGGA...CCCTCTTTTGGTGTGTCTGAAGACAGCTACAGTGTGCTCATATACAATAAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054442.11 ENSMUST00000118310.8 |
||
| 3UTR-3UTR CCA 90 bp | CGAACTCATTCCTTATGTTGGTGTCGTATTTTACTGAAGGAGTATAGCTTATTTTGGTTGCTTGCTCCCTaGGCCAGCAAATGGGTCCAT | + |
|
Preference number: 2 (lower is better) Translates to: RTHSLCWCRILLKEYSLFWLLAP*ASKWVH Trigger: ATGGACCCATTTGCTGGCCCAGGGAGCAAGCAACCA...AAATAAGCTATACTCCTTCAGTAAAATACGACACCAACATAAGGAATGAGTTCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
||
| 3UTR-3UTR TCA 90 bp | CCCAATCTTTGTTATATACACACAGCGATACACTGCTTTGGCTGGCTTTTCAAATTGGTTTTAGGTTTTTaGGACAGGGTTTCTCTGTGC | + |
|
Preference number: 2 (lower is better) Translates to: PNLCYIHTAIHCFGWLFKLVLGF*DRVSLC Trigger: GCACAGAGAAACCCTGTCTCAAAAACCTAAAACCAA...TTTGAAAAGCCAGCCAAAGCAGTGTATCGCTGTGTGTATATAACAAAGATTGGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000054442.11 ENSMUST00000118310.8 |
||
| 3UTR-3UTR GCA 90 bp | CAGATTTCTAATAAAATTTCTTGGCCAGGCAATGGCATCAGTCTGAAACCTACTCCCTCACGGGTTTCTTaGCTTTTCTTTTCACTTTGG | + |
|
Preference number: 2 (lower is better) Translates to: QISNKISWPGNGISLKPTPSRVS*LFFSLW Trigger: CCAAAGTGAAAAGAAAAGGCAAGAAACCCGTGAGGG...AGTAGGTTTCAGACTGATGCCATTGCCTGGCCAAGAAATTTTATTAGAAATCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000054442.11 ENSMUST00000118310.8 |
||
| 3UTR-3UTR GCA 90 bp | TGGTTGGTGTCAGTCTCTACCATATATTCTTTATGGGAAAGGTCAATGAAAATTAGCACTTACGGCTCTTaGAGAGGATCTGGGTTCATG | + |
|
Preference number: 2 (lower is better) Translates to: WLVSVSTIYSLWERSMKISTYGS*RGSGFM Trigger: CATGAACCCAGATCCTCTGCAAGAGCCGTAAGTGCT...AATTTTCATTGACCTTTCCCATAAAGAATATATGGTAGAGACTGACACCAACCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118115.2 |
||
| 3UTR-3UTR GCA 90 bp | CGAACTCATTCCTTATGTTGGTGTCGTATTTTACTGAAGGAGTATAGCTTATTTATCACACTTGGTGCTTaGAGCAGAATCTCTCCCCTT | + |
|
Preference number: 2 (lower is better) Translates to: RTHSLCWCRILLKEYSLFITLGA*SRISPL Trigger: AAGGGGAGAGATTCTGCTGCAAGCACCAAGTGTGAT...AAATAAGCTATACTCCTTCAGTAAAATACGACACCAACATAAGGAATGAGTTCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
||
| 3UTR-3UTR TCA 90 bp | CCCAATCTTTGTTATATACACACAGCGATACACTGCTTTGGCTGGCTTTTCAAACATATGTTGATTCTCTaGAAACAAAATGACCCAGCT | + |
|
Preference number: 2 (lower is better) Translates to: PNLCYIHTAIHCFGWLFKHMLIL*KQNDPA Trigger: AGCTGGGTCATTTTGTTTTCAGAGAATCAACATATG...TTTGAAAAGCCAGCCAAAGCAGTGTATCGCTGTGTGTATATAACAAAGATTGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054442.11 ENSMUST00000118310.8 |
||
| 3UTR-3UTR TCA 90 bp | CAGATTTCTAATAAAATTTCTTGGCCAGGCAATGGCATCAGTCTGAAACCTACTCTTGTTGTCAGCAAGTaGATAGTTAACCAGAAACAC | + |
|
Preference number: 2 (lower is better) Translates to: QISNKISWPGNGISLKPTLVVSK*IVNQKH Trigger: GTGTTTCTGGTTAACTATTCACTTGCTGACAACAAG...AGTAGGTTTCAGACTGATGCCATTGCCTGGCCAAGAAATTTTATTAGAAATCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118115.2 |
||
| 3UTR CAA 90 bp | GTCAGTCTCTACCATATATTCTTTATGGGAAAGGTCAATGAAAATTaGGACGAGCTGAATCCTAACAGTGTCCAGAGTATAAATGAATTC | + |
|
Preference number: 2 (lower is better) Translates to: VSLYHIFFMGKVNEN*DELNPNSVQSINEF Trigger: GAATTCATTTATACTCTGGACACTGTTAGGATTCAGCTCGTCCAAATTTTCATTGACCTTTCCCATAAAGAATATATGGTAGAGACTGAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118115.2 |
||
| 3UTR CAA 90 bp | GATTTTAACCAGTGTCCTTTCTGGTGGACATTTAGGGTAATTAAATaGCTTTGCTATATTATAGCTAAGGCTAAATCAAACGTGCCTTCA | + |
|
Preference number: 2 (lower is better) Translates to: DFNQCPFWWTFRVIK*LCYIIAKAKSNVPS Trigger: TGAAGGCACGTTTGATTTAGCCTTAGCTATAATATAGCAAAGCAATTTAATTACCCTAAATGTCCACCAGAAAGGACACTGGTTAAAATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054442.11 ENSMUST00000118310.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGTCCCTGTCAGGCCTCTCTACCCGCTGCTCCAGAATGCAGTGGGGCTTCCTGCTAGTGGCCATCTGGTaGCTTGCTCCCTGGGCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: QSLSGLSTRCSRMQWGFLLVAIW*LAPWAS Trigger: GCTGGCCCAGGGAGCAAGCAACCAGATGGCCACTAG...CAGGAAGCCCCACTGCATTCTGGAGCAGCGGGTAGAGAGGCCTGACAGGGACTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
||
| 3UTR TCA 72 bp | CTGGCCTGGAACTCAGATCTGCCTGCCTTTGCCTCCTaGGACTGGGGGACTAAAGGCACCACCACGGCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: LAWNSDLPAFAS*DWGTKGTTTAS Trigger: GCTGGCCGTGGTGGTGCCTTTAGTCCCCCAGTCTCAGGAGGCAAAGGCAGGCAGATCTGAGTTCCAGGCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
||
| 3UTR CCA 72 bp | TGTGGGTGTGCATGTGGTCAGAGGGCCTGCACAGTGTaGACCCTCACTGGTCTCTGGCCCAGACTGAACCGT | + |
|
Preference number: 3 (lower is better) Translates to: CGCACGQRACTV*TLTGLWPRLNR Trigger: ACGGTTCAGTCTGGGCCAGAGACCAGTGAGGGTCCACACTGTGCAGGCCCTCTGACCACATGCACACCCACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
||
| 3UTR GCA 72 bp | ATAGACCACGCTAGCTGTCCTGTGGGCTTCCTACCATaGCTCAGGTCTGCGGGATTAGAGGCATGGGCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: IDHASCPVGFLP*LRSAGLEAWAA Trigger: AGCAGCCCATGCCTCTAATCCCGCAGACCTGAGGCATGGTAGGAAGCCCACAGGACAGCTAGCGTGGTCTAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
||
| 3UTR CCA 72 bp | CAGAGGGCCTGCACAGTGTGGACCCTCACTGGTCTCTaGCCCAGACTGAACCGTTTGTATCACAAGGGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: QRACTVWTLTGL*PRLNRLYHKGP Trigger: AGGACCCTTGTGATACAAACGGTTCAGTCTGGGCCAGAGACCAGTGAGGGTCCACACTGTGCAGGCCCTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
||
| 3UTR CCA 72 bp | GGAACTGGTCTGGCTATTTCAGCAGGTGTGACGCTTTaGGTCAGTCCCTGTCAGGCCTCTCTACCCGCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: GTGLAISAGVTL*VSPCQASLPAA Trigger: AGCAGCGGGTAGAGAGGCCTGACAGGGACTGACCCAAAGCGTCACACCTGCTGAAATAGCCAGACCAGTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
||
| 3UTR TCA 72 bp | GGGGTGGGGAAGGAGTCATCACTCTCCATCCAGCTATaGATCCTGGGAACTCCAACAGTGGCCTGCCTGCAA | + |
|
Preference number: 3 (lower is better) Translates to: GVGKESSLSIQL*ILGTPTVACLQ Trigger: TTGCAGGCAGGCCACTGTTGGAGTTCCCAGGATTCATAGCTGGATGGAGAGTGATGACTCCTTCCCCACCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118115.2 |
||
| 3UTR GCA 72 bp | TCACTGTATAGCCCTGGCTGGCCTGGAACTCAGATCTaGCTGCCTTTGCCTCCTGAGACTGGGGGACTAAAG | + |
|
Preference number: 3 (lower is better) Translates to: SLYSPGWPGTQI*LPLPPETGGLK Trigger: CTTTAGTCCCCCAGTCTCAGGAGGCAAAGGCAGGCAGATCTGAGTTCCAGGCCAGCCAGGGCTATACAGTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
||
| 3UTR GCA 72 bp | AGGAGTCAGGCATATGCTAGTGGCCATCTGGTTGCTTaGTCCCTGGGCCAGCAAATGGGTCCATCCTTGGTC | + |
|
Preference number: 3 (lower is better) Translates to: RSQAYASGHLVA*SLGQQMGPSLV Trigger: GACCAAGGATGGACCCATTTGCTGGCCCAGGGAGCAAGCAACCAGATGGCCACTAGCATATGCCTGACTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
||
| 3UTR GCA 72 bp | ATGCCTCAGGTCTGCGGGATTAGAGGCATGGGCTGCTaGGAGGCTTTCACATGGGTTCAGAGGAAACCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: MPQVCGIRGMGC*EAFTWVQRKPA Trigger: AGCTGGTTTCCTCTGAACCCATGTGAAAGCCTCGCAGCAGCCCATGCCTCTAATCCCGCAGACCTGAGGCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
||
| 3UTR CCA 72 bp | AGGCATATGCTAGTGGCCATCTGGTTGCTTGCTCCCTaGGCCAGCAAATGGGTCCATCCTTGGTCCCTAAGG | + |
|
Preference number: 3 (lower is better) Translates to: RHMLVAIWLLAP*ASKWVHPWSLR Trigger: CCTTAGGGACCAAGGATGGACCCATTTGCTGGCCCAGGGAGCAAGCAACCAGATGGCCACTAGCATATGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
||
| 3UTR CCA 72 bp | TTCCTACCATGCCTCAGGTCTGCGGGATTAGAGGCATaGGCTGCTGCGAGGCTTTCACATGGGTTCAGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: FLPCLRSAGLEA*AAARLSHGFRG Trigger: TCCTCTGAACCCATGTGAAAGCCTCGCAGCAGCCCATGCCTCTAATCCCGCAGACCTGAGGCATGGTAGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
||
| 3UTR-3UTR CAA 90 bp | CGGCTGGCCTTGAATTCAGGGATTCTCCGCCTCTGTCTCCAGAGTGCTGGAATTAAACCTACTGAGCGATaGTTCAGCTGCCGGCAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: RLALNSGILRLCLQSAGIKPTER*FSCRQL Trigger: GAGCTGCCGGCAGCTGAACAATCGCTCAGTAGGTTT...AATTCCAGCACTCTGGAGACAGAGGCGGAGAATCCCTGAATTCAAGGCCAGCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054442.11 ENSMUST00000118310.8 |
||
| 3UTR CCA 72 bp | GGGATTAGAGGCATGGGCTGCTGCGAGGCTTTCACATaGGTTCAGAGGAAACCAGCTTTGGGCCTCACTTTC | + |
|
Preference number: 3 (lower is better) Translates to: GIRGMGCCEAFT*VQRKPALGLTF Trigger: GAAAGTGAGGCCCAAAGCTGGTTTCCTCTGAACCCATGTGAAAGCCTCGCAGCAGCCCATGCCTCTAATCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
||
| 3UTR TCA 72 bp | TTCTGCATCACTCACACATCCGTGACCGACAGCCTCTaGACAGTCACTGGAGTGCTGTTAGCAGCAGTGACC | + |
|
Preference number: 3 (lower is better) Translates to: FCITHTSVTDSL*TVTGVLLAAVT Trigger: GGTCACTGCTGCTAACAGCACTCCAGTGACTGTTCAGAGGCTGTCGGTCACGGATGTGTGAGTGATGCAGAA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
||
| 3UTR TCA 72 bp | CCCACTACTGATATGCTGGTGGCCTCTGGAGATGGTTaGCTAGGGTCAGGAGATCAAGAGGGCTATAGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: PTTDMLVASGDG*LGSGDQEGYSG Trigger: GCCACTATAGCCCTCTTGATCTCCTGACCCTAGTCAACCATCTCCAGAGGCCACCAGCATATCAGTAGTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGGCAGGATCCCTTGTGAACTACCCTACCATGTGGGTGCTGAGAACTGAGCCCGCCCTCACGGGTTTCTaGCCTTTTCTTTTCACTTTG | + |
|
Preference number: 3 (lower is better) Translates to: RAGSLVNYPTMWVLRTEPALTGF*PFLFTL Trigger: CAAAGTGAAAAGAAAAGGCAAGAAACCCGTGAGGGC...GGGCTCAGTTCTCAGCACCCACATGGTAGGGTAGTTCACAAGGGATCCTGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054442.11 ENSMUST00000118310.8 |
||
| 3UTR GCA 72 bp | AGCGATGACTTGGTGGTTAAGAGCACTTACGGCTCTTaGAGAGGATCTGGGTTCATGTCCCAGTACCCGCAT | + |
|
Preference number: 3 (lower is better) Translates to: SDDLVVKSTYGS*RGSGFMSQYPH Trigger: ATGCGGGTACTGGGACATGAACCCAGATCCTCTGCAAGAGCCGTAAGTGCTCTTAACCACCAAGTCATCGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118115.2 |
||
| 3UTR GCA 72 bp | GTGAGAGCTCTGACTAGGCAGATCACACTTGGTGCTTaGAGCAGAATCTCTCCCCTTCTGCATCACTCACAC | + |
|
Preference number: 3 (lower is better) Translates to: VRALTRQITLGA*SRISPLLHHSH Trigger: GTGTGAGTGATGCAGAAGGGGAGAGATTCTGCTGCAAGCACCAAGTGTGATCTGCCTAGTCAGAGCTCTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
||
| 3UTR CCA 72 bp | ATTTCAGAAGGAGTCAGGCATATGCTAGTGGCCATCTaGTTGCTTGCTCCCTGGGCCAGCAAATGGGTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: ISEGVRHMLVAI*LLAPWASKWVH Trigger: ATGGACCCATTTGCTGGCCCAGGGAGCAAGCAACCAGATGGCCACTAGCATATGCCTGACTCCTTCTGAAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
||
| 3UTR CCA 72 bp | GCGAGGCTTTCACATGGGTTCAGAGGAAACCAGCTTTaGGCCTCACTTTCACAAGCATCTCATCGGCTAAGG | + |
|
Preference number: 3 (lower is better) Translates to: ARLSHGFRGNQL*ASLSQASHRLR Trigger: CCTTAGCCGATGAGATGCTTGTGAAAGTGAGGCCCAAAGCTGGTTTCCTCTGAACCCATGTGAAAGCCTCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
||
| 3UTR-3UTR CAA 90 bp | GTTCAGCTGCCGGCAGCTCTTGTTTACTTCTGTGGCTTTCAGGACACTAGGACTTTTGTTACCTCAAGCTaGGACCTGGGAGATCTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: VQLPAALVYFCGFQDTRTFVTSS*DLGDLG Trigger: TCCCAGATCTCCCAGGTCCAAGCTTGAGGTAACAAA...AGTCCTAGTGTCCTGAAAGCCACAGAAGTAAACAAGAGCTGCCGGCAGCTGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118115.2 |
||
| 3UTR TCA 72 bp | CAAGCTTGGACCTGGGAGATCTGGGACACAACTTTATaGAGGTCCGAGGATTCTGACAGACGTAAGGGCCTA | + |
|
Preference number: 3 (lower is better) Translates to: QAWTWEIWDTTL*RSEDSDRRKGL Trigger: TAGGCCCTTACGTCTGTCAGAATCCTCGGACCTTCATAAAGTTGTGTCCCAGATCTCCCAGGTCCAAGCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118115.2 |
||
| 3UTR GCA 72 bp | GGCATCAGTCTGAAACCTACTGAGCGATTGTTCAGCTaGCGGCAGCTCTTGTTTACTTCTGTGGCTTTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: GISLKPTERLFS*RQLLFTSVAFR Trigger: CCTGAAAGCCACAGAAGTAAACAAGAGCTGCCGGCAGCTGAACAATCGCTCAGTAGGTTTCAGACTGATGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054442.11 ENSMUST00000118115.2 ENSMUST00000118310.8 |
||
| 3UTR CCA 72 bp | GAAATTCAGCTCCAGCCTCTTAGCACTCAGTTGTCCTaGTCACCAAAAAGCCTCGGGTGCAGGATCTACACA | + |
|
Preference number: 3 (lower is better) Translates to: EIQLQPLSTQLS*SPKSLGCRIYT Trigger: TGTGTAGATCCTGCACCCGAGGCTTTTTGGTGACCAGGACAACTGAGTGCTAAGAGGCTGGAGCTGAATTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054442.11 ENSMUST00000118310.8 |
||
| 3UTR CCA 72 bp | AGGGTAATGGACCCGTTTAAGCACTGTGGCTTGATCTaGGTGAGAGCTCTGACTAGGCAGATCACACTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: RVMDPFKHCGLI*VRALTRQITLG Trigger: ACCAAGTGTGATCTGCCTAGTCAGAGCTCTCACCCAGATCAAGCCACAGTGCTTAAACGGGTCCATTACCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
||
| 3UTR CCA 72 bp | TGCTCATCTGTTATTACTCTATGTCCCTTCACCTTCTaGGGGCGTGCTGATACGGCTTACCTCCTCACTACG | + |
|
Preference number: 3 (lower is better) Translates to: CSSVITLCPFTF*GRADTAYLLTT Trigger: CGTAGTGAGGAGGTAAGCCGTATCAGCACGCCCCCAGAAGGTGAAGGGACATAGAGTAATAACAGATGAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
||
| 3UTR CCA 72 bp | TCACCCGAGCACGTGAGGGCACTCATAAGAGACAAATaGGGTCCTTCATCTTGGAGTAGGACTGAACATGGT | + |
|
Preference number: 3 (lower is better) Translates to: SPEHVRALIRDK*GPSSWSRTEHG Trigger: ACCATGTTCAGTCCTACTCCAAGATGAAGGACCCCATTTGTCTCTTATGAGTGCCCTCACGTGCTCGGGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
||
| 3UTR-3UTR CAA 90 bp | GAAGAGAGTCACGTGTTTATGAATGTCTCCTCACTCTCAGCGTGTGGTGTCTCTGTGCTGTGGCTTATTTaGGCTCCTCAGTTCACCCGA | + |
|
Preference number: 3 (lower is better) Translates to: EESHVFMNVSSLSACGVSVLWLI*APQFTR Trigger: TCGGGTGAACTGAGGAGCCAAAATAAGCCACAGCAC...AGAGACACCACACGCTGAGAGTGAGGAGACATTCATAAACACGTGACTCTCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
||
| 3UTR GCA 72 bp | TGTGGTGTCTCTATCATAACGCAGCAGCAAGGCCTTTaGCAGTCACACTCTTTGAAATGTCTCCACAGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: CGVSIITQQQGL*QSHSLKCLHSL Trigger: GAGGCTGTGGAGACATTTCAAAGAGTGTGACTGGCAAAGGCCTTGCTGCTGCGTTATGATAGAGACACCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
||
| 3UTR CCA 72 bp | AGTGCTCTCAGCACTACTCCATCCTTTTGTAGGAACTaGTCTGGCTATTTCAGCAGGTGTGACGCTTTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: SALSTTPSFCRN*SGYFSRCDALG Trigger: ACCCAAAGCGTCACACCTGCTGAAATAGCCAGACCAGTTCCTACAAAAGGATGGAGTAGTGCTGAGAGCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGCTTTGGCTGGCTTTTCAAAATAGCGTGTATGGGATGAAATTCAGCTCCAGCAGCTGCCGGCAGCTCTaGTTTACTTCTGTGGCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: LLWLAFQNSVYGMKFSSSSCRQL*FTSVAF Trigger: GAAAGCCACAGAAGTAAACAAGAGCTGCCGGCAGCT...GCTGGAGCTGAATTTCATCCCATACACGCTATTTTGAAAAGCCAGCCAAAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054442.11 ENSMUST00000118310.8 |
||
| 3UTR TCA 72 bp | CTAATAAAATTTCTTGGCCAGGCAATGGCATCAGTCTaGAACCTACTGAGCGATTGTTCAGCTGCCGGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: LIKFLGQAMASV*NLLSDCSAAGS Trigger: GCTGCCGGCAGCTGAACAATCGCTCAGTAGGTTTCAGACTGATGCCATTGCCTGGCCAAGAAATTTTATTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054442.11 ENSMUST00000118115.2 ENSMUST00000118310.8 |
||
| 3UTR TCA 72 bp | TGCAGTGGGGCTTCCTGCGATAAGATTCCAGGCTACTaGGCCAGCCCCATTTATCTGTTTATAACTGAGATG | + |
|
Preference number: 3 (lower is better) Translates to: CSGASCDKIPGY*ASPIYLFITEM Trigger: CATCTCAGTTATAAACAGATAAATGGGGCTGGCTCAGTAGCCTGGAATCTTATCGCAGGAAGCCCCACTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
||
| 3UTR TCA 72 bp | CTCAGTGTGGTTCATCACAATTACACTGGGAGATCATaGATTCCACTTTGCTTCGGGACTCTGGAGACCTCC | + |
|
Preference number: 3 (lower is better) Translates to: LSVVHHNYTGRS*IPLCFGTLETS Trigger: GGAGGTCTCCAGAGTCCCGAAGCAAAGTGGAATTCATGATCTCCCAGTGTAATTGTGATGAACCACACTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
||
| 3UTR CCA 72 bp | ACTGTAGCTGTCTTCAGACACACCAAAAGAGGGCATTaGCTCTCATTACAGATAGCTGTGAGCCACCATGTG | + |
|
Preference number: 3 (lower is better) Translates to: TVAVFRHTKRGH*LSLQIAVSHHV Trigger: CACATGGTGGCTCACAGCTATCTGTAATGAGAGCCAATGCCCTCTTTTGGTGTGTCTGAAGACAGCTACAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054442.11 ENSMUST00000118310.8 |
||
| 3UTR CCA 72 bp | TTGAAAATAAAACCAGAGGCCCGAGCGATGACTTGGTaGTTAAGAGCACTTACGGCTCTTGCAGAGGATCTG | + |
|
Preference number: 3 (lower is better) Translates to: LKIKPEARAMTW*LRALTALAEDL Trigger: CAGATCCTCTGCAAGAGCCGTAAGTGCTCTTAACCACCAAGTCATCGCTCGGGCCTCTGGTTTTATTTTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118115.2 |
||
| 3UTR CCA 72 bp | TCACGTGTTTATGAATGTCTCCTCACTCTCAGCGTGTaGTGTCTCTATCATAACGCAGCAGCAAGGCCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: SRVYECLLTLSV*CLYHNAAARPL Trigger: CAAAGGCCTTGCTGCTGCGTTATGATAGAGACACCACACGCTGAGAGTGAGGAGACATTCATAAACACGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGTTATATACACACAGCGATACACTGCTTTGGCTGGCTTTTCAAAATAGCGTGGCATTTCGGCTGGCCTaGAATTCAGGGATTCTCCGC | + |
|
Preference number: 3 (lower is better) Translates to: LLYTHSDTLLWLAFQNSVAFRLA*NSGILR Trigger: GCGGAGAATCCCTGAATTCAAGGCCAGCCGAAATGC...CACGCTATTTTGAAAAGCCAGCCAAAGCAGTGTATCGCTGTGTGTATATAACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054442.11 ENSMUST00000118310.8 |
||
| 3UTR CCA 72 bp | ACAATTACAGATTGTTGTGAGCCACTATGTGGTTGCTaGGAATTGAACTCGGGACCTCTGGAAGAGCAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: TITDCCEPLCGC*ELNSGPLEEQS Trigger: TGACTGCTCTTCCAGAGGTCCCGAGTTCAATTCCCAGCAACCACATAGTGGCTCACAACAATCTGTAATTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118115.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGATTTCTAATAAAATTTCTTGGCCAGGCAATGGCATCAGTCTGAAACCTACTAAACCTACTGAGCGATaGTTCAGCTGCCGGCAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: QISNKISWPGNGISLKPTKPTER*FSCRQL Trigger: GAGCTGCCGGCAGCTGAACAATCGCTCAGTAGGTTT...AGTAGGTTTCAGACTGATGCCATTGCCTGGCCAAGAAATTTTATTAGAAATCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054442.11 ENSMUST00000118115.2 ENSMUST00000118310.8 |
||
| 3UTR TCA 72 bp | GCTTTAAGTTTGTATATCAGAAGCTTCACCCACTACTaGTATGCTGGTGGCCTCTGGAGATGGTTGACTAGG | + |
|
Preference number: 3 (lower is better) Translates to: ALSLYIRSFTHY*YAGGLWRWLTR Trigger: CCTAGTCAACCATCTCCAGAGGCCACCAGCATATCAGTAGTGGGTGAAGCTTCTGATATACAAACTTAAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
||
| 3UTR GCA 72 bp | CCTATACTTATTTACAAGGGAAGGTTTGTTCAGGTTTaGTTGTCTGCCCCTCCCCCATCTTCAGCAACTTTG | + |
|
Preference number: 3 (lower is better) Translates to: PILIYKGRFVQV*LSAPPPSSATL Trigger: CAAAGTTGCTGAAGATGGGGGAGGGGCAGACAAGCAAACCTGAACAAACCTTCCCTTGTAAATAAGTATAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
||
| 3UTR CCA 72 bp | TATTATTATTATTGCTGGGATTTAAGACCTGCTCCATaGGATGGAACCCACGGTGAGGTCGAACTGCTAGGA | + |
|
Preference number: 3 (lower is better) Translates to: YYYYCWDLRPAP*DGTHGEVELLG Trigger: TCCTAGCAGTTCGACCTCACCGTGGGTTCCATCCCATGGAGCAGGTCTTAAATCCCAGCAATAATAATAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118115.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGATTTCTAATAAAATTTCTTGGCCAGGCAATGGCATCAGTCTGAAACCTACTAGCTGCCGGCAGCTCTaGTTTACTTCTGTGGCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: QISNKISWPGNGISLKPTSCRQL*FTSVAF Trigger: GAAAGCCACAGAAGTAAACAAGAGCTGCCGGCAGCT...AGTAGGTTTCAGACTGATGCCATTGCCTGGCCAAGAAATTTTATTAGAAATCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054442.11 ENSMUST00000118115.2 ENSMUST00000118310.8 |
||
| 3UTR-3UTR CAA 90 bp | TATATACACACAGCGATACACTGCTTTGGCTGGCTTTTCAAAATAGCGTGTATGCCTCTTAGCACTCAGTaGTCCTGGTCACCAAAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: YIHTAIHCFGWLFKIACMPLSTQ*SWSPKS Trigger: GCTTTTTGGTGACCAGGACAACTGAGTGCTAAGAGG...CATACACGCTATTTTGAAAAGCCAGCCAAAGCAGTGTATCGCTGTGTGTATATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000054442.11 ENSMUST00000118310.8 |
||
| 3UTR TCA 72 bp | CAAAAAGAGGGCATCAGATACAATTACAGATTGTTGTaGGCCACTATGTGGTTGCTGGGAATTGAACTCGGG | + |
|
Preference number: 3 (lower is better) Translates to: QKEGIRYNYRLL*ATMWLLGIELG Trigger: CCCGAGTTCAATTCCCAGCAACCACATAGTGGCTCACAACAATCTGTAATTGTATCTGATGCCCTCTTTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118115.2 |
||
| 3UTR GCA 72 bp | ACCTCACAACCACCTCTAACTACATTTAGAATCCAATaGTTTCTTCTGTCCTTAGGCTCCTGCCTCCAAAAG | + |
|
Preference number: 3 (lower is better) Translates to: TSQPPLTTFRIQ*FLLSLGSCLQK Trigger: CTTTTGGAGGCAGGAGCCTAAGGACAGAAGAAAGCATTGGATTCTAAATGTAGTTAGAGGTGGTTGTGAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118115.2 |
||
| 3UTR CCA 72 bp | TACTGCAGCGACCAACTTCTCTATTATTATTATTGCTaGGATTTAAGACCTGCTCCATGGGATGGAACCCAC | + |
|
Preference number: 3 (lower is better) Translates to: YCSDQLLYYYYC*DLRPAPWDGTH Trigger: GTGGGTTCCATCCCATGGAGCAGGTCTTAAATCCCAGCAATAATAATAATAGAGAAGTTGGTCGCTGCAGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118115.2 |
||
| 3UTR CCA 72 bp | AGGGCACTCATAAGAGACAAATGGGGTCCTTCATCTTaGAGTAGGACTGAACATGGTATTTTACAGCTTTGC | + |
|
Preference number: 3 (lower is better) Translates to: RALIRDKWGPSS*SRTEHGILQLC Trigger: GCAAAGCTGTAAAATACCATGTTCAGTCCTACTCCAAGATGAAGGACCCCATTTGTCTCTTATGAGTGCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
||
| 3UTR GCA 72 bp | TGTTACTGCAGCGACCAACTTCTCTATTATTATTATTaGTGGGATTTAAGACCTGCTCCATGGGATGGAACC | + |
|
Preference number: 3 (lower is better) Translates to: CYCSDQLLYYYY*WDLRPAPWDGT Trigger: GGTTCCATCCCATGGAGCAGGTCTTAAATCCCAGCAATAATAATAATAGAGAAGTTGGTCGCTGCAGTAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118115.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGTTGGTGTCAGTCTCTACCATATATTCTTTATGGGAAAGGTCAATGAAAATTAGCTGCCGGCAGCTCTaGTTTACTTCTGTGGCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: WLVSVSTIYSLWERSMKISCRQL*FTSVAF Trigger: GAAAGCCACAGAAGTAAACAAGAGCTGCCGGCAGCT...AATTTTCATTGACCTTTCCCATAAAGAATATATGGTAGAGACTGACACCAACCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118115.2 |
||
| 3UTR TCA 72 bp | GTTTGTATCACAAGGGTCCTCTTCACAGCTCTTTCTTaGGCTTTAAGTTTGTATATCAGAAGCTTCACCCAC | + |
|
Preference number: 3 (lower is better) Translates to: VCITRVLFTALS*ALSLYIRSFTH Trigger: GTGGGTGAAGCTTCTGATATACAAACTTAAAGCTCAAGAAAGAGCTGTGAAGAGGACCCTTGTGATACAAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
||
| 3UTR TCA 72 bp | AACTGTTTCCTCAATGACTGTTTTCTCTGTATGAACTaGAACCATGACCATGAATTCCCTCTTGCTCTGCAC | + |
|
Preference number: 3 (lower is better) Translates to: NCFLNDCFLCMN*NHDHEFPLALH Trigger: GTGCAGAGCAAGAGGGAATTCATGGTCATGGTTTCAGTTCATACAGAGAAAACAGTCATTGAGGAAACAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
||
| 3UTR-3UTR CAA 90 bp | CGAACTCATTCCTTATGTTGGTGTCGTATTTTACTGAAGGAGTATAGCTTATTTTGCCAGTCACACTCTTaGAAATGTCTCCACAGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: RTHSLCWCRILLKEYSLFCQSHS*KCLHSL Trigger: GAGGCTGTGGAGACATTTCAAAGAGTGTGACTGGCA...AAATAAGCTATACTCCTTCAGTAAAATACGACACCAACATAAGGAATGAGTTCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
||
| 3UTR TCA 72 bp | GCTAGGAGTCAGAGTTTATATCTGAATATTAGTTTATaGATGAGCGAAACTGCTCTGTCCCAGGAAGACAAC | + |
|
Preference number: 3 (lower is better) Translates to: ARSQSLYLNISL*MSETALSQEDN Trigger: GTTGTCTTCCTGGGACAGAGCAGTTTCGCTCATTCATAAACTAATATTCAGATATAAACTCTGACTCCTAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118115.2 |
||
| 3UTR CCA 72 bp | ATGTCCTCTGGAGGAGCTCGAACTCATTCCTTATGTTaGTGTCGTATTTTACTGAAGGAGTATAGCTTATTT | + |
|
Preference number: 3 (lower is better) Translates to: MSSGGARTHSLC*CRILLKEYSLF Trigger: AAATAAGCTATACTCCTTCAGTAAAATACGACACCAACATAAGGAATGAGTTCGAGCTCCTCCAGAGGACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
||
| 3UTR-3UTR CAA 90 bp | CGAACTCATTCCTTATGTTGGTGTCGTATTTTACTGAAGGAGTATAGCTTATTTATGATTTGTGTTTGCTaGGAGGTAGGGTCTCACTGT | + |
|
Preference number: 3 (lower is better) Translates to: RTHSLCWCRILLKEYSLFMICVC*EVGSHC Trigger: ACAGTGAGACCCTACCTCCAAGCAAACACAAATCAT...AAATAAGCTATACTCCTTCAGTAAAATACGACACCAACATAAGGAATGAGTTCG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
||
| 3UTR CCA 72 bp | CAATCTTTGTTATATACACACAGCGATACACTGCTTTaGCTGGCTTTTCAAAATAGCGTGTATGGGATGAAA | + |
|
Preference number: 3 (lower is better) Translates to: QSLLYTHSDTLL*LAFQNSVYGMK Trigger: TTTCATCCCATACACGCTATTTTGAAAAGCCAGCCAAAGCAGTGTATCGCTGTGTGTATATAACAAAGATTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054442.11 ENSMUST00000118310.8 |
||
| 3UTR-3UTR CAA 90 bp | CGAACTCATTCCTTATGTTGGTGTCGTATTTTACTGAAGGAGTATAGCTTATTTTGGTATTTTACAGCTTaGCCAGAGAACAATCAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: RTHSLCWCRILLKEYSLFWYFTA*PENNQQ Trigger: TTGCTGATTGTTCTCTGGCAAAGCTGTAAAATACCA...AAATAAGCTATACTCCTTCAGTAAAATACGACACCAACATAAGGAATGAGTTCG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
||
| 3UTR TCA 72 bp | ACGTTGAGAAGGAAACTATCGGCGAATACTTTTAGTTaGCTACAAGTGTTTTTAAAGTGTGCATTCAGATTT | + |
|
Preference number: 3 (lower is better) Translates to: TLRRKLSANTFS*LQVFLKCAFRF Trigger: AAATCTGAATGCACACTTTAAAAACACTTGTAGTCAACTAAAAGTATTCGCCGATAGTTTCCTTCTCAACGT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
||
| CDS-3UTR CCA 90 bp | AGGGCAGGATCCCTTGTGAACTACCCTACCATGTGGGTGCTGAGAACTGAGCCCGAACGTGTCCTCCGCTaGCTCGTACACGTCGCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RAGSLVNYPTMWVLRTEPERVLR*LVHVAE Trigger: TTCCGCGACGTGTACGAGCCAGCGGAGGACACGTTC...GGGCTCAGTTCTCAGCACCCACATGGTAGGGTAGTTCACAAGGGATCCTGCCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054442.11 ENSMUST00000118310.8 |
||
| CDS-3UTR GCA 90 bp | CGCCTCTGTCTCCAGAGTGCTGGAATTAGAGGTGTGTGCCACCACCACCTGGCTCATGGAGGCCAGGAATaGAGACACCACACCAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: RLCLQSAGIRGVCHHHLAHGGQE*RHHTRS Trigger: GGATCTGGTGTGGTGTCTGCATTCCTGGCCTCCATG...AGCCAGGTGGTGGTGGCACACACCTCTAATTCCAGCACTCTGGAGACAGAGGCG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054442.11 ENSMUST00000118310.8 |
||
| CDS-3UTR TCA 90 bp | CGAGCGATGACTTGGTGGTTAAGAGCACTTACGGCTCTTGCAGAGGATCTGGGTGGAAGAACCTGTCCATaGCTTCCCGGCCGTTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RAMTWWLRALTALAEDLGGRTCP*LPGRFC Trigger: GCAGAAACGGCCGGGAAGTCATGGACAGGTTCTTCC...ACCCAGATCCTCTGCAAGAGCCGTAAGTGCTCTTAACCACCAAGTCATCGCTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118115.2 |
||
| CDS-3UTR GCA 90 bp | CAGCTCCAGCCTCTTAGCACTCAGTTGTCCTGGTCACCAAAAAGCCTCGGGTGCCTGGGCAGCAAGCCGTaGACCAAATCTGTGATCACT | + |
|
Preference number: 4 (lower is better) Translates to: QLQPLSTQLSWSPKSLGCLGSKP*TKSVIT Trigger: AGTGATCACAGATTTGGTGCACGGCTTGCTGCCCAG...GCACCCGAGGCTTTTTGGTGACCAGGACAACTGAGTGCTAAGAGGCTGGAGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054442.11 ENSMUST00000118310.8 |
||
| CDS-3UTR TCA 90 bp | CGCCTCTGTCTCCAGAGTGCTGGAATTAGAGGTGTGTGCCACCACCACCTGGCTTCTGTGATCACTGGCTaGACATGGACTCTGTTACAG | + |
|
Preference number: 4 (lower is better) Translates to: RLCLQSAGIRGVCHHHLASVITG*TWTLLQ Trigger: CTGTAACAGAGTCCATGTTCAGCCAGTGATCACAGA...AGCCAGGTGGTGGTGGCACACACCTCTAATTCCAGCACTCTGGAGACAGAGGCG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054442.11 ENSMUST00000118310.8 |
||
| CDS-3UTR CCA 90 bp | CGTGTATGGGATGAAATTCAGCTCCAGCCTCTTAGCACTCAGTTGTCCTGGTCAGAACGTGTCCTCCGCTaGCTCGTACACGTCGCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RVWDEIQLQPLSTQLSWSERVLR*LVHVAE Trigger: TTCCGCGACGTGTACGAGCCAGCGGAGGACACGTTC...TGACCAGGACAACTGAGTGCTAAGAGGCTGGAGCTGAATTTCATCCCATACACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054442.11 ENSMUST00000118310.8 |
||
| CDS-3UTR TCA 90 bp | CACCAAAAGAGGGCATTGGCTCTCATTACAGATAGCTGTGAGCCACCATGTGGTGGAAGAACCTGTCCATaGCTTCCCGGCCGTTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HQKRALALITDSCEPPCGGRTCP*LPGRFC Trigger: GCAGAAACGGCCGGGAAGTCATGGACAGGTTCTTCC...ACCACATGGTGGCTCACAGCTATCTGTAATGAGAGCCAATGCCCTCTTTTGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054442.11 |
||
| CDS-3UTR GCA 90 bp | GGCATCAGTCTGAAACCTACTGAGCGATTGTTCAGCTGCCGGCAGCTCTTGTTTCATGGAGGCCAGGAATaGAGACACCACACCAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: GISLKPTERLFSCRQLLFHGGQE*RHHTRS Trigger: GGATCTGGTGTGGTGTCTGCATTCCTGGCCTCCATG...AAACAAGAGCTGCCGGCAGCTGAACAATCGCTCAGTAGGTTTCAGACTGATGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054442.11 ENSMUST00000118115.2 ENSMUST00000118310.8 |
||
| CDS-3UTR GCA 90 bp | GTTCAGCTGCCGGCAGCTCTTGTTTACTTCTGTGGCTTTCAGGACACTAGGACTCATGGAGGCCAGGAATaGAGACACCACACCAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: VQLPAALVYFCGFQDTRTHGGQE*RHHTRS Trigger: GGATCTGGTGTGGTGTCTGCATTCCTGGCCTCCATG...AGTCCTAGTGTCCTGAAAGCCACAGAAGTAAACAAGAGCTGCCGGCAGCTGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118115.2 ENSMUST00000118310.8 |
||
| CDS-3UTR CCA 90 bp | GGCATCAGTCTGAAACCTACTGAGCGATTGTTCAGCTGCCGGCAGCTCTTGTTTTGGGGAGAGGAGTTCTaGAGCCAGTGGGAAGAACCT | + |
|
Preference number: 4 (lower is better) Translates to: GISLKPTERLFSCRQLLFWGEEF*SQWEEP Trigger: AGGTTCTTCCCACTGGCTCCAGAACTCCTCTCCCCA...AAACAAGAGCTGCCGGCAGCTGAACAATCGCTCAGTAGGTTTCAGACTGATGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054442.11 ENSMUST00000118115.2 |
||
| CDS-3UTR CCA 90 bp | GTTCAGCTGCCGGCAGCTCTTGTTTACTTCTGTGGCTTTCAGGACACTAGGACTTGGGGAGAGGAGTTCTaGAGCCAGTGGGAAGAACCT | + |
|
Preference number: 4 (lower is better) Translates to: VQLPAALVYFCGFQDTRTWGEEF*SQWEEP Trigger: AGGTTCTTCCCACTGGCTCCAGAACTCCTCTCCCCA...AGTCCTAGTGTCCTGAAAGCCACAGAAGTAAACAAGAGCTGCCGGCAGCTGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118115.2 |
||
| CDS-3UTR GCA 90 bp | GGCATCAGTCTGAAACCTACTGAGCGATTGTTCAGCTGCCGGCAGCTCTTGTTTCTGGGCAGCAAGCCGTaGACCAAATCTGTGATCACT | + |
|
Preference number: 4 (lower is better) Translates to: GISLKPTERLFSCRQLLFLGSKP*TKSVIT Trigger: AGTGATCACAGATTTGGTGCACGGCTTGCTGCCCAG...AAACAAGAGCTGCCGGCAGCTGAACAATCGCTCAGTAGGTTTCAGACTGATGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054442.11 ENSMUST00000118115.2 ENSMUST00000118310.8 |
||
| CDS-3UTR GCA 90 bp | GAAGAGAGTCACGTGTTTATGAATGTCTCCTCACTCTCAGCGTGTGGTGTCTCTCATGGAGGCCAGGAATaGAGACACCACACCAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: EESHVFMNVSSLSACGVSHGGQE*RHHTRS Trigger: GGATCTGGTGTGGTGTCTGCATTCCTGGCCTCCATG...AGAGACACCACACGCTGAGAGTGAGGAGACATTCATAAACACGTGACTCTCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
||
| CDS-3UTR CCA 90 bp | AGTGGCCTGGTGGCCATATTGAAAAGGAGAAGAGAGTCACGTGTTTATGAATGTGAACGTGTCCTCCGCTaGCTCGTACACGTCGCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SGLVAILKRRRESRVYECERVLR*LVHVAE Trigger: TTCCGCGACGTGTACGAGCCAGCGGAGGACACGTTC...ACATTCATAAACACGTGACTCTCTTCTCCTTTTCAATATGGCCACCAGGCCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
||
| 3UTR CAA 72 bp | CCAGGCAATGGCATCAGTCTGAAACCTACTGAGCGATaGTTCAGCTGCCGGCAGCTCTTGTTTACTTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PGNGISLKPTER*FSCRQLLFTSV Trigger: CACAGAAGTAAACAAGAGCTGCCGGCAGCTGAACAATCGCTCAGTAGGTTTCAGACTGATGCCATTGCCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054442.11 ENSMUST00000118115.2 ENSMUST00000118310.8 |
||
| 3UTR CAA 72 bp | TGCGAGGCTTTCACATGGGTTCAGAGGAAACCAGCTTaGGGCCTCACTTTCACAAGCATCTCATCGGCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: CEAFTWVQRKPA*GLTFTSISSAK Trigger: CTTAGCCGATGAGATGCTTGTGAAAGTGAGGCCCAAAGCTGGTTTCCTCTGAACCCATGTGAAAGCCTCGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
||
| CDS-3UTR TCA 90 bp | GGCATCAGTCTGAAACCTACTGAGCGATTGTTCAGCTGCCGGCAGCTCTTGTTTTCTGTGATCACTGGCTaGACATGGACTCTGTTACAG | + |
|
Preference number: 4 (lower is better) Translates to: GISLKPTERLFSCRQLLFSVITG*TWTLLQ Trigger: CTGTAACAGAGTCCATGTTCAGCCAGTGATCACAGA...AAACAAGAGCTGCCGGCAGCTGAACAATCGCTCAGTAGGTTTCAGACTGATGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054442.11 ENSMUST00000118115.2 ENSMUST00000118310.8 |
||
| CDS-3UTR TCA 90 bp | TTACCTGCTGAGCCATCTTGCTGGAAATACATTGAGACGCCAAGTGGGTCACCGTCTGTGATCACTGGCTaGACATGGACTCTGTTACAG | + |
|
Preference number: 4 (lower is better) Translates to: LPAEPSCWKYIETPSGSPSVITG*TWTLLQ Trigger: CTGTAACAGAGTCCATGTTCAGCCAGTGATCACAGA...CGGTGACCCACTTGGCGTCTCAATGTATTTCCAGCAAGATGGCTCAGCAGGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
||
| CDS-3UTR GCA 90 bp | GAAGAGAGTCACGTGTTTATGAATGTCTCCTCACTCTCAGCGTGTGGTGTCTCTCTGGGCAGCAAGCCGTaGACCAAATCTGTGATCACT | + |
|
Preference number: 4 (lower is better) Translates to: EESHVFMNVSSLSACGVSLGSKP*TKSVIT Trigger: AGTGATCACAGATTTGGTGCACGGCTTGCTGCCCAG...AGAGACACCACACGCTGAGAGTGAGGAGACATTCATAAACACGTGACTCTCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
||
| 3UTR CAA 72 bp | ATAACGCAGCAGCAAGGCCTTTGCCAGTCACACTCTTaGAAATGTCTCCACAGCCTCCAGCCTGTGAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: ITQQQGLCQSHS*KCLHSLQPVRN Trigger: ATTTCTCACAGGCTGGAGGCTGTGGAGACATTTCAAAGAGTGTGACTGGCAAAGGCCTTGCTGCTGCGTTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
||
| 3UTR CAA 72 bp | GTGTGGTGTCTCTATCATAACGCAGCAGCAAGGCCTTaGCCAGTCACACTCTTTGAAATGTCTCCACAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VWCLYHNAAARP*PVTLFEMSPQP Trigger: AGGCTGTGGAGACATTTCAAAGAGTGTGACTGGCAAAGGCCTTGCTGCTGCGTTATGATAGAGACACCACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
||
| 3UTR CAA 72 bp | CACCTTTACCTGCTGAGCCATCTTGCTGGAAATACATaGAGACGCCAAGTGGGTCACCGTGTTCTCAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: HLYLLSHLAGNT*RRQVGHRVLRT Trigger: AGTTCTGAGAACACGGTGACCCACTTGGCGTCTCAATGTATTTCCAGCAAGATGGCTCAGCAGGTAAAGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120284.8 |
||
| CDS-3UTR TCA 90 bp | TTGTTATATACACACAGCGATACACTGCTTTGGCTGGCTTTTCAAAATAGCGTGGCTGAACCTGAGGACTaGCAGGGCTTCTTGGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLYTHSDTLLWLAFQNSVAEPED*QGFLAC Trigger: GCAGGCCAAGAAGCCCTGTCAGTCCTCAGGTTCAGC...CACGCTATTTTGAAAAGCCAGCCAAAGCAGTGTATCGCTGTGTGTATATAACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054442.11 |
||
| 3UTR CAA 72 bp | CACTGTAGCTGTCTTCAGACACACCAAAAGAGGGCATaGGCTCTCATTACAGATAGCTGTGAGCCACCATGT | + |
|
Preference number: 4 (lower is better) Translates to: HCSCLQTHQKRA*ALITDSCEPPC Trigger: ACATGGTGGCTCACAGCTATCTGTAATGAGAGCCAATGCCCTCTTTTGGTGTGTCTGAAGACAGCTACAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054442.11 ENSMUST00000118310.8 |
||
| 3UTR CAA 72 bp | AAACCTACTGAGCGATTGTTCAGCTGCCGGCAGCTCTaGTTTACTTCTGTGGCTTTCAGGACACTAGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: KPTERLFSCRQL*FTSVAFRTLGL Trigger: AAGTCCTAGTGTCCTGAAAGCCACAGAAGTAAACAAGAGCTGCCGGCAGCTGAACAATCGCTCAGTAGGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118115.2 ENSMUST00000118310.8 |
||
| CDS-3UTR CCA 90 bp | CAGATTTCTAATAAAATTTCTTGGCCAGGCAATGGCATCAGTCTGAAACCTACTGAACGTGTCCTCCGCTaGCTCGTACACGTCGCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QISNKISWPGNGISLKPTERVLR*LVHVAE Trigger: TTCCGCGACGTGTACGAGCCAGCGGAGGACACGTTC...AGTAGGTTTCAGACTGATGCCATTGCCTGGCCAAGAAATTTTATTAGAAATCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054442.11 ENSMUST00000118115.2 ENSMUST00000118310.8 |
||
| CDS-3UTR CCA 90 bp | CCCAATCTTTGTTATATACACACAGCGATACACTGCTTTGGCTGGCTTTTCAAAGAGTTCTGGAGCCAGTaGGAAGAACCTGTCCATGAC | + |
|
Preference number: 4 (lower is better) Translates to: PNLCYIHTAIHCFGWLFKEFWSQ*EEPVHD Trigger: GTCATGGACAGGTTCTTCCCACTGGCTCCAGAACTC...TTTGAAAAGCCAGCCAAAGCAGTGTATCGCTGTGTGTATATAACAAAGATTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054442.11 |
||
| 3UTR CAA 72 bp | ATTCCTCTGATTAAACAGTGTAAGCCAGGCAAATGTTaGTTACCTCAAGCTTGGACCTGGGAGATCTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: IPLIKQCKPGKC*LPQAWTWEIWD Trigger: GTCCCAGATCTCCCAGGTCCAAGCTTGAGGTAACAAACATTTGCCTGGCTTACACTGTTTAATCAGAGGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118115.2 |
||
| CDS-3UTR TCA 90 bp | TTGTTATATACACACAGCGATACACTGCTTTGGCTGGCTTTTCAAAATAGCGTGCGTGCACCAAATCTGTaGTCACTGGCTGAACATGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLYTHSDTLLWLAFQNSVRAPNL*SLAEHG Trigger: TCCATGTTCAGCCAGTGATCACAGATTTGGTGCACG...CACGCTATTTTGAAAAGCCAGCCAAAGCAGTGTATCGCTGTGTGTATATAACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054442.11 ENSMUST00000118310.8 |
||
| CDS-3UTR GCA 90 bp | CAGATTTCTAATAAAATTTCTTGGCCAGGCAATGGCATCAGTCTGAAACCTACTTGTTTCCAAGGTACATaGGGCTGCCTCAGGGTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: QISNKISWPGNGISLKPTCFQGT*GCLRVD Trigger: ATCAACCCTGAGGCAGCCGCATGTACCTTGGAAACA...AGTAGGTTTCAGACTGATGCCATTGCCTGGCCAAGAAATTTTATTAGAAATCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054442.11 ENSMUST00000118115.2 ENSMUST00000118310.8 |
||
| CDS-3UTR TCA 90 bp | TTATTTATTGTATATGAGCACACTGTAGCTGTCTTCAGACACACCAAAAGAGGGTCTGTGATCACTGGCTaGACATGGACTCTGTTACAG | + |
|
Preference number: 4 (lower is better) Translates to: LFIVYEHTVAVFRHTKRGSVITG*TWTLLQ Trigger: CTGTAACAGAGTCCATGTTCAGCCAGTGATCACAGA...CCCTCTTTTGGTGTGTCTGAAGACAGCTACAGTGTGCTCATATACAATAAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054442.11 ENSMUST00000118310.8 |
||
| CDS-3UTR GCA 90 bp | TGGTTGGTGTCAGTCTCTACCATATATTCTTTATGGGAAAGGTCAATGAAAATTCTGGGCAGCAAGCCGTaGACCAAATCTGTGATCACT | + |
|
Preference number: 4 (lower is better) Translates to: WLVSVSTIYSLWERSMKILGSKP*TKSVIT Trigger: AGTGATCACAGATTTGGTGCACGGCTTGCTGCCCAG...AATTTTCATTGACCTTTCCCATAAAGAATATATGGTAGAGACTGACACCAACCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118115.2 |
||
| 3UTR CAA 72 bp | CAGTGTCCTTTCTGGTGGACATTTAGGGTAATTAAATaGCTTTGCTATATTATAGCTAAGGCTAAATCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: QCPFWWTFRVIK*LCYIIAKAKSN Trigger: GTTTGATTTAGCCTTAGCTATAATATAGCAAAGCAATTTAATTACCCTAAATGTCCACCAGAAAGGACACTG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054442.11 ENSMUST00000118310.8 |
||
| CDS-3UTR CAA 90 bp | CGCCTCTGTCTCCAGAGTGCTGGAATTAGAGGTGTGTGCCACCACCACCTGGCTAGTAGAACAGCCCTCTaGGGGAGAGGAGTTCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: RLCLQSAGIRGVCHHHLASRTAL*GRGVLE Trigger: CTCCAGAACTCCTCTCCCCAAGAGGGCTGTTCTACT...AGCCAGGTGGTGGTGGCACACACCTCTAATTCCAGCACTCTGGAGACAGAGGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054442.11 |
||
| CDS CCA 90 bp | CCCCTTCAGTCTGGGCAGCAAGCCGTGCACCAAATCTGTGATCACTaGCTGAACATGGACTCTGTTACAGCGTGCTGTTTCCAAGGTACA | + |
|
Preference number: 5 (lower is better) Translates to: PLQSGQQAVHQICDH*LNMDSVTACCFQGT Trigger: TGTACCTTGGAAACAGCACGCTGTAACAGAGTCCATGTTCAGCCAGTGATCACAGATTTGGTGCACGGCTTGCTGCCCAGACTGAAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054442.11 ENSMUST00000118115.2 ENSMUST00000118310.8 ENSMUST00000120284.8 |
||
| CDS TCA 90 bp | TTCAGTCTGGGCAGCAAGCCGTGCACCAAATCTGTGATCACTGGCTaGACATGGACTCTGTTACAGCGTGCTGTTTCCAAGGTACATGCG | + |
|
Preference number: 5 (lower is better) Translates to: FSLGSKPCTKSVITG*TWTLLQRAVSKVHA Trigger: CGCATGTACCTTGGAAACAGCACGCTGTAACAGAGTCCATGTTCAGCCAGTGATCACAGATTTGGTGCACGGCTTGCTGCCCAGACTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054442.11 ENSMUST00000118115.2 ENSMUST00000118310.8 ENSMUST00000120284.8 |
||
| CDS TCA 90 bp | CTACTTTCCCCTTCAGTCTGGGCAGCAAGCCGTGCACCAAATCTGTaGTCACTGGCTGAACATGGACTCTGTTACAGCGTGCTGTTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LLSPSVWAASRAPNL*SLAEHGLCYSVLFP Trigger: TGGAAACAGCACGCTGTAACAGAGTCCATGTTCAGCCAGTGATCACAGATTTGGTGCACGGCTTGCTGCCCAGACTGAAGGGGAAAGTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054442.11 ENSMUST00000118115.2 ENSMUST00000118310.8 ENSMUST00000120284.8 |
||
| CDS-3UTR CAA 90 bp | TCCAGCCTCTTAGCACTCAGTTGTCCTGGTCACCAAAAAGCCTCGGGTGCAGGAAAGATTTCCTCGGGATaGTTTTCTTTTACGGTAACT | + |
|
Preference number: 5 (lower is better) Translates to: SSLLALSCPGHQKASGAGKISSG*FSFTVT Trigger: AGTTACCGTAAAAGAAAACAATCCCGAGGAAATCTT...TCCTGCACCCGAGGCTTTTTGGTGACCAGGACAACTGAGTGCTAAGAGGCTGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000054442.11 |
||
| CDS-3UTR CAA 90 bp | TGGTTGGTGTCAGTCTCTACCATATATTCTTTATGGGAAAGGTCAATGAAAATTAGTAGAACAGCCCTCTaGGGGAGAGGAGTTCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: WLVSVSTIYSLWERSMKISRTAL*GRGVLE Trigger: CTCCAGAACTCCTCTCCCCAAGAGGGCTGTTCTACT...AATTTTCATTGACCTTTCCCATAAAGAATATATGGTAGAGACTGACACCAACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118115.2 |
||
| CDS GCA 72 bp | GGCTCGTACACGTCGCGGAAGGCTCCGCGACCCACGTaGCCGTACAACGGCGTGGGGACACTCGGCGCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: GSYTSRKAPRPT*PYNGVGTLGAA Trigger: GGCGGCGCCGAGTGTCCCCACGCCGTTGTACGGGCACGTGGGTCGCGGAGCCTTCCGCGACGTGTACGAGCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054442.11 ENSMUST00000118115.2 ENSMUST00000118310.8 ENSMUST00000120284.8 |
||
| CDS TCA 72 bp | AGAGGAGTTCTGGAGCCAGTGGGAAGAACCTGTCCATaGCTTCCCGGCCGTTTCTGCCGCCAGCCCAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RGVLEPVGRTCP*LPGRFCRQPRL Trigger: CAGCCTGGGCTGGCGGCAGAAACGGCCGGGAAGTCATGGACAGGTTCTTCCCACTGGCTCCAGAACTCCTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054442.11 ENSMUST00000118115.2 |
||
| CDS TCA 72 bp | CCTTCAGTCTGGGCAGCAAGCCGTGCACCAAATCTGTaGTCACTGGCTGAACATGGACTCTGTTACAGCGTG | + |
|
Preference number: 6 (lower is better) Translates to: PSVWAASRAPNL*SLAEHGLCYSV Trigger: CACGCTGTAACAGAGTCCATGTTCAGCCAGTGATCACAGATTTGGTGCACGGCTTGCTGCCCAGACTGAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054442.11 ENSMUST00000118115.2 ENSMUST00000118310.8 ENSMUST00000120284.8 |
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