Pregenerated sensors for N4BP3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001053Ensembl transcript IDs: ENSMUST00000001080.16, ENSMUST00000142721.2, ENSMUST00000156835.8
Found 159 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGCCACAGCTTCGGGAGCAGGTACCCTATCCATCCCATTGCCCGCTaGAGCCCTCCACGGGGCGGGCGTCCCATCCCTGATCTGGCCTCT | + |
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Preference number: 1 (lower is better) Translates to: CHSFGSRYPIHPIAR*SPPRGGRPIPDLAS Trigger: AGAGGCCAGATCAGGGATGGGACGCCCGCCCCGTGGAGGGCTCCAGCGGGCAATGGGATGGATAGGGTACCTGCTCCCGAAGCTGTGGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| 3UTR TCA 90 bp | TCCCATTGCCCGCTGGAGCCCTCCACGGGGCGGGCGTCCCATCCCTaGTCTGGCCTCTACAGATTCTGCCTCCAACCAGTGCAAGGGAGG | + |
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Preference number: 1 (lower is better) Translates to: SHCPLEPSTGRASHP*SGLYRFCLQPVQGR Trigger: CCTCCCTTGCACTGGTTGGAGGCAGAATCTGTAGAGGCCAGATCAGGGATGGGACGCCCGCCCCGTGGAGGGCTCCAGCGGGCAATGGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| 3UTR CCA 90 bp | TTGCCCGCTGGAGCCCTCCACGGGGCGGGCGTCCCATCCCTGATCTaGCCTCTACAGATTCTGCCTCCAACCAGTGCAAGGGAGGAGCCT | + |
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Preference number: 1 (lower is better) Translates to: LPAGALHGAGVPSLI*PLQILPPTSAREEP Trigger: AGGCTCCTCCCTTGCACTGGTTGGAGGCAGAATCTGTAGAGGCCAGATCAGGGATGGGACGCCCGCCCCGTGGAGGGCTCCAGCGGGCAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| 3UTR CCA 90 bp | AGGCCACACCCACTGTTGGAAGCAGGGCTAGACCCTCCCTGGGTGTaGTTCGCTGCTAGCAAGACTTTGCCACAGCTTCGGGAGCAGGTA | + |
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Preference number: 1 (lower is better) Translates to: RPHPLLEAGLDPPWV*FAASKTLPQLREQV Trigger: TACCTGCTCCCGAAGCTGTGGCAAAGTCTTGCTAGCAGCGAACCACACCCAGGGAGGGTCTAGCCCTGCTTCCAACAGTGGGTGTGGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| 3UTR GCA 90 bp | ACCTCAGGCCAGGTCACATGCCACCCTCCTCCTCTCCTGCTCTTCTaGATCGTGGGGCTGAAGCTTGGACGGCTCCAACCTACTTTACCA | + |
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Preference number: 1 (lower is better) Translates to: TSGQVTCHPPPLLLF*IVGLKLGRLQPTLP Trigger: TGGTAAAGTAGGTTGGAGCCGTCCAAGCTTCAGCCCCACGATGCAGAAGAGCAGGAGAGGAGGAGGGTGGCATGTGACCTGGCCTGAGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| 3UTR CCA 90 bp | TTTACCAGGCCACACCCACTGTTGGAAGCAGGGCTAGACCCTCCCTaGGTGTGGTTCGCTGCTAGCAAGACTTTGCCACAGCTTCGGGAG | + |
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Preference number: 1 (lower is better) Translates to: FTRPHPLLEAGLDPP*VWFAASKTLPQLRE Trigger: CTCCCGAAGCTGTGGCAAAGTCTTGCTAGCAGCGAACCACACCCAGGGAGGGTCTAGCCCTGCTTCCAACAGTGGGTGTGGCCTGGTAAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| 3UTR CCA 90 bp | TTTTATTCTGGAGGTGGCCAATCTTCCCAACCCTGGCTCCTTCCATaGAGGAAGACCTCAGGCCAGGTCACATGCCACCCTCCTCCTCTC | + |
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Preference number: 1 (lower is better) Translates to: FYSGGGQSSQPWLLP*RKTSGQVTCHPPPL Trigger: GAGAGGAGGAGGGTGGCATGTGACCTGGCCTGAGGTCTTCCTCCATGGAAGGAGCCAGGGTTGGGAAGATTGGCCACCTCCAGAATAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| 3UTR GCA 90 bp | CTGGCCTCTACAGATTCTGCCTCCAACCAGTGCAAGGGAGGAGCCTaGCATCTCAGGGTATCTTCTGACAGTATGCCCACTGTCAGCACA | + |
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Preference number: 1 (lower is better) Translates to: LASTDSASNQCKGGA*HLRVSSDSMPTVST Trigger: TGTGCTGACAGTGGGCATACTGTCAGAAGATACCCTGAGATGGCAGGCTCCTCCCTTGCACTGGTTGGAGGCAGAATCTGTAGAGGCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| 3UTR GCA 90 bp | CGTCCCATCCCTGATCTGGCCTCTACAGATTCTGCCTCCAACCAGTaGAAGGGAGGAGCCTGCCATCTCAGGGTATCTTCTGACAGTATG | + |
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Preference number: 1 (lower is better) Translates to: RPIPDLASTDSASNQ*KGGACHLRVSSDSM Trigger: CATACTGTCAGAAGATACCCTGAGATGGCAGGCTCCTCCCTTGCACTGGTTGGAGGCAGAATCTGTAGAGGCCAGATCAGGGATGGGACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| 3UTR CCA 90 bp | TATCAACTAGGCCTCCTCATAAAAACGTGCTTTTTATTCTGGAGGTaGCCAATCTTCCCAACCCTGGCTCCTTCCATGGAGGAAGACCTC | + |
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Preference number: 1 (lower is better) Translates to: YQLGLLIKTCFLFWR*PIFPTLAPSMEEDL Trigger: GAGGTCTTCCTCCATGGAAGGAGCCAGGGTTGGGAAGATTGGCCACCTCCAGAATAAAAAGCACGTTTTTATGAGGAGGCCTAGTTGATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| 3UTR CCA 90 bp | CAATCTTATCAACTAGGCCTCCTCATAAAAACGTGCTTTTTATTCTaGAGGTGGCCAATCTTCCCAACCCTGGCTCCTTCCATGGAGGAA | + |
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Preference number: 1 (lower is better) Translates to: QSYQLGLLIKTCFLF*RWPIFPTLAPSMEE Trigger: TTCCTCCATGGAAGGAGCCAGGGTTGGGAAGATTGGCCACCTCCAGAATAAAAAGCACGTTTTTATGAGGAGGCCTAGTTGATAAGATTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| 3UTR CCA 90 bp | ACACATAAGACCAGAGACTGCAATGGGGTATATTCTTTCCATTGTTaGGAACATAGAAGGAACTACAGCCTAGGTCCAAGGCCTGGAGCA | + |
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Preference number: 1 (lower is better) Translates to: THKTRDCNGVYSFHC*EHRRNYSLGPRPGA Trigger: TGCTCCAGGCCTTGGACCTAGGCTGTAGTTCCTTCTATGTTCCCAACAATGGAAAGAATATACCCCATTGCAGTCTCTGGTCTTATGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| 3UTR-3UTR GCA 90 bp | TCCAAGGCCTGGAGCACTGACCATCCAGGAGCCTCTGGCCTCAGGCCAAGGACAACCCTCCTCCTCTCCTaGTCTTCTGCATCGTGGGGC | + |
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Preference number: 2 (lower is better) Translates to: SKAWSTDHPGASGLRPRTTLLLS*SSASWG Trigger: GCCCCACGATGCAGAAGAGCAGGAGAGGAGGAGGGT...TGTCCTTGGCCTGAGGCCAGAGGCTCCTGGATGGTCAGTGCTCCAGGCCTTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| 3UTR CAA 90 bp | GAAGCTTGGACGGCTCCAACCTACTTTACCAGGCCACACCCACTGTaGGAAGCAGGGCTAGACCCTCCCTGGGTGTGGTTCGCTGCTAGC | + |
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Preference number: 2 (lower is better) Translates to: EAWTAPTYFTRPHPL*EAGLDPPWVWFAAS Trigger: GCTAGCAGCGAACCACACCCAGGGAGGGTCTAGCCCTGCTTCCAACAGTGGGTGTGGCCTGGTAAAGTAGGTTGGAGCCGTCCAAGCTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| 3UTR-3UTR TCA 90 bp | TTTATTCTGGAGGTGGCCAATCTTCCCAACCCTGGCTCCTTCCATGGAGGAAGACGGGCGTCCCATCCCTaGTCTGGCCTCTACAGATTC | + |
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Preference number: 2 (lower is better) Translates to: FILEVANLPNPGSFHGGRRASHP*SGLYRF Trigger: GAATCTGTAGAGGCCAGATCAGGGATGGGACGCCCG...TCTTCCTCCATGGAAGGAGCCAGGGTTGGGAAGATTGGCCACCTCCAGAATAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| 3UTR-3UTR CCA 90 bp | CAAACACATAAGACCAGAGACTGCAATGGGGTATATTCTTTCCATTGTTGGGAAGACCCTCCCTGGGTGTaGTTCGCTGCTAGCAAGACT | + |
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Preference number: 2 (lower is better) Translates to: QTHKTRDCNGVYSFHCWEDPPWV*FAASKT Trigger: AGTCTTGCTAGCAGCGAACCACACCCAGGGAGGGTC...TTCCCAACAATGGAAAGAATATACCCCATTGCAGTCTCTGGTCTTATGTGTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| 3UTR-3UTR CCA 90 bp | CATAAGACCAGAGACTGCAATGGGGTATATTCTTTCCATTGTTGGGAACATAGACCATCCAGGAGCCTCTaGCCTCAGGCCAAGGACAAT | + |
|
Preference number: 2 (lower is better) Translates to: HKTRDCNGVYSFHCWEHRPSRSL*PQAKDN Trigger: ATTGTCCTTGGCCTGAGGCCAGAGGCTCCTGGATGG...TCTATGTTCCCAACAATGGAAAGAATATACCCCATTGCAGTCTCTGGTCTTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| 3UTR-3UTR CCA 90 bp | AGGACAATCTTATCAACTAGGCCTCCTCATAAAAACGTGCTTTTTATTCTGGAGGTCCCATCCCTGATCTaGCCTCTACAGATTCTGCCT | + |
|
Preference number: 2 (lower is better) Translates to: RTILSTRPPHKNVLFILEVPSLI*PLQILP Trigger: AGGCAGAATCTGTAGAGGCCAGATCAGGGATGGGAC...CTCCAGAATAAAAAGCACGTTTTTATGAGGAGGCCTAGTTGATAAGATTGTCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| 3UTR CCA 72 bp | TTCGGGAGCAGGTACCCTATCCATCCCATTGCCCGCTaGAGCCCTCCACGGGGCGGGCGTCCCATCCCTGAT | + |
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Preference number: 3 (lower is better) Translates to: FGSRYPIHPIAR*SPPRGGRPIPD Trigger: ATCAGGGATGGGACGCCCGCCCCGTGGAGGGCTCCAGCGGGCAATGGGATGGATAGGGTACCTGCTCCCGAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| 3UTR CCA 72 bp | GGAGCCCTCCACGGGGCGGGCGTCCCATCCCTGATCTaGCCTCTACAGATTCTGCCTCCAACCAGTGCAAGG | + |
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Preference number: 3 (lower is better) Translates to: GALHGAGVPSLI*PLQILPPTSAR Trigger: CCTTGCACTGGTTGGAGGCAGAATCTGTAGAGGCCAGATCAGGGATGGGACGCCCGCCCCGTGGAGGGCTCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| 3UTR CCA 72 bp | GGAGGTGGCCAATCTTCCCAACCCTGGCTCCTTCCATaGAGGAAGACCTCAGGCCAGGTCACATGCCACCCT | + |
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Preference number: 3 (lower is better) Translates to: GGGQSSQPWLLP*RKTSGQVTCHP Trigger: AGGGTGGCATGTGACCTGGCCTGAGGTCTTCCTCCATGGAAGGAGCCAGGGTTGGGAAGATTGGCCACCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| 3UTR TCA 72 bp | ACCCTCCTCCTCTCCTGCTCTTCTGCATCGTGGGGCTaGAGCTTGGACGGCTCCAACCTACTTTACCAGGCC | + |
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Preference number: 3 (lower is better) Translates to: TLLLSCSSASWG*SLDGSNLLYQA Trigger: GGCCTGGTAAAGTAGGTTGGAGCCGTCCAAGCTTCAGCCCCACGATGCAGAAGAGCAGGAGAGGAGGAGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| 3UTR GCA 72 bp | ACCCTCCCTGGGTGTGGTTCGCTGCTAGCAAGACTTTaGCACAGCTTCGGGAGCAGGTACCCTATCCATCCC | + |
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Preference number: 3 (lower is better) Translates to: TLPGCGSLLARL*HSFGSRYPIHP Trigger: GGGATGGATAGGGTACCTGCTCCCGAAGCTGTGGCAAAGTCTTGCTAGCAGCGAACCACACCCAGGGAGGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| 3UTR CCA 72 bp | CCACACCCACTGTTGGAAGCAGGGCTAGACCCTCCCTaGGTGTGGTTCGCTGCTAGCAAGACTTTGCCACAG | + |
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Preference number: 3 (lower is better) Translates to: PHPLLEAGLDPP*VWFAASKTLPQ Trigger: CTGTGGCAAAGTCTTGCTAGCAGCGAACCACACCCAGGGAGGGTCTAGCCCTGCTTCCAACAGTGGGTGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| 3UTR TCA 72 bp | GTGCAAGGGAGGAGCCTGCCATCTCAGGGTATCTTCTaGCAGTATGCCCACTGTCAGCACACTTGGCGAGCC | + |
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Preference number: 3 (lower is better) Translates to: VQGRSLPSQGIF*QYAHCQHTWRA Trigger: GGCTCGCCAAGTGTGCTGACAGTGGGCATACTGTCAGAAGATACCCTGAGATGGCAGGCTCCTCCCTTGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| 3UTR CCA 72 bp | GCTTTTTATTCTGGAGGTGGCCAATCTTCCCAACCCTaGCTCCTTCCATGGAGGAAGACCTCAGGCCAGGTC | + |
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Preference number: 3 (lower is better) Translates to: AFYSGGGQSSQP*LLPWRKTSGQV Trigger: GACCTGGCCTGAGGTCTTCCTCCATGGAAGGAGCCAGGGTTGGGAAGATTGGCCACCTCCAGAATAAAAAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| 3UTR GCA 72 bp | ACAGATTCTGCCTCCAACCAGTGCAAGGGAGGAGCCTaGCATCTCAGGGTATCTTCTGACAGTATGCCCACT | + |
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Preference number: 3 (lower is better) Translates to: TDSASNQCKGGA*HLRVSSDSMPT Trigger: AGTGGGCATACTGTCAGAAGATACCCTGAGATGGCAGGCTCCTCCCTTGCACTGGTTGGAGGCAGAATCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| 3UTR CCA 72 bp | GGCCTCCTCATAAAAACGTGCTTTTTATTCTGGAGGTaGCCAATCTTCCCAACCCTGGCTCCTTCCATGGAG | + |
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Preference number: 3 (lower is better) Translates to: GLLIKTCFLFWR*PIFPTLAPSME Trigger: CTCCATGGAAGGAGCCAGGGTTGGGAAGATTGGCCACCTCCAGAATAAAAAGCACGTTTTTATGAGGAGGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| 3UTR CCA 72 bp | CAACTAGGCCTCCTCATAAAAACGTGCTTTTTATTCTaGAGGTGGCCAATCTTCCCAACCCTGGCTCCTTCC | + |
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Preference number: 3 (lower is better) Translates to: QLGLLIKTCFLF*RWPIFPTLAPS Trigger: GGAAGGAGCCAGGGTTGGGAAGATTGGCCACCTCCAGAATAAAAAGCACGTTTTTATGAGGAGGCCTAGTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| CDS-3UTR TCA 90 bp | AGCCCTCCACGGGGCGGGCGTCCCATCCCTGATCTGGCCTCTACAGATTCTGCCGGGCTCAGGGGTGGGTaGCAGGCCAGAGTGTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: SPPRGGRPIPDLASTDSAGLRGG*QARVCR Trigger: CCTGCACACTCTGGCCTGTCACCCACCCCTGAGCCC...GGCAGAATCTGTAGAGGCCAGATCAGGGATGGGACGCCCGCCCCGTGGAGGGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| CDS-3UTR GCA 90 bp | CGGGGCGGGCGTCCCATCCCTGATCTGGCCTCTACAGATTCTGCCTCCAACCAGCTGAGCCTGGGCTTGTaGCCGGCTGCCCCGAAGTTG | + |
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Preference number: 4 (lower is better) Translates to: RGGRPIPDLASTDSASNQLSLGL*PAAPKL Trigger: CAACTTCGGGGCAGCCGGGCACAAGCCCAGGCTCAG...CTGGTTGGAGGCAGAATCTGTAGAGGCCAGATCAGGGATGGGACGCCCGCCCCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| CDS-3UTR GCA 90 bp | CGGGGCGGGCGTCCCATCCCTGATCTGGCCTCTACAGATTCTGCCTCCAACCAGGGCTTCACTGCCTCCTaGCTCCCCCAGCAGTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: RGGRPIPDLASTDSASNQGFTAS*LPQQSS Trigger: AGAGGACTGCTGGGGGAGGCAGGAGGCAGTGAAGCC...CTGGTTGGAGGCAGAATCTGTAGAGGCCAGATCAGGGATGGGACGCCCGCCCCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| CDS-3UTR TCA 90 bp | CTGGCCTCTACAGATTCTGCCTCCAACCAGTGCAAGGGAGGAGCCTGCCATCTCGCTAGCTCAGCGTCCTaGGCCTGGGCTTGTGCCCGG | + |
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Preference number: 4 (lower is better) Translates to: LASTDSASNQCKGGACHLASSAS*AWACAR Trigger: CCGGGCACAAGCCCAGGCTCAGGACGCTGAGCTAGC...GAGATGGCAGGCTCCTCCCTTGCACTGGTTGGAGGCAGAATCTGTAGAGGCCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| CDS-3UTR GCA 90 bp | CTACTTTACCAGGCCACACCCACTGTTGGAAGCAGGGCTAGACCCTCCCTGGGTCGCGGTGCCTGCTCCTaGAGGCTGTGCACTGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: LLYQATPTVGSRARPSLGRGACS*RLCTAS Trigger: GGAGGCAGTGCACAGCCTGCAGGAGCAGGCACCGCG...ACCCAGGGAGGGTCTAGCCCTGCTTCCAACAGTGGGTGTGGCCTGGTAAAGTAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| CDS-3UTR CCA 90 bp | GGCGTCCCATCCCTGATCTGGCCTCTACAGATTCTGCCTCCAACCAGTGCAAGGCTCCTTGGGGCTCCTTaGAGCACGGTCCAGGGAGCC | + |
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Preference number: 4 (lower is better) Translates to: GVPSLIWPLQILPPTSARLLGAP*STVQGA Trigger: GGCTCCCTGGACCGTGCTCCAAGGAGCCCCAAGGAG...CCTTGCACTGGTTGGAGGCAGAATCTGTAGAGGCCAGATCAGGGATGGGACGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| CDS-3UTR CCA 90 bp | AGCCCTCCACGGGGCGGGCGTCCCATCCCTGATCTGGCCTCTACAGATTCTGCCATAAACAGCTGCAGTTaGAGGTTGCGCTCGCTGCGC | + |
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Preference number: 4 (lower is better) Translates to: SPPRGGRPIPDLASTDSAINSCS*RLRSLR Trigger: GCGCAGCGAGCGCAACCTCCAACTGCAGCTGTTTAT...GGCAGAATCTGTAGAGGCCAGATCAGGGATGGGACGCCCGCCCCGTGGAGGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| CDS-3UTR TCA 90 bp | CTACTTTACCAGGCCACACCCACTGTTGGAAGCAGGGCTAGACCCTCCCTGGGTCACCGAGGTCCCTCTTaGGCTCTTCACGGGCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: LLYQATPTVGSRARPSLGHRGPS*ALHGPQ Trigger: CTGAGGCCCGTGAAGAGCTCAAGAGGGACCTCGGTG...ACCCAGGGAGGGTCTAGCCCTGCTTCCAACAGTGGGTGTGGCCTGGTAAAGTAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| CDS-3UTR GCA 90 bp | CTGGCCTCTACAGATTCTGCCTCCAACCAGTGCAAGGGAGGAGCCTGCCATCTCCGCTGCCCATGGCAATaGCAGCAGGGCCTGAGGTTG | + |
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Preference number: 4 (lower is better) Translates to: LASTDSASNQCKGGACHLRCPWQ*QQGLRL Trigger: CAACCTCAGGCCCTGCTGGCATTGCCATGGGCAGCG...GAGATGGCAGGCTCCTCCCTTGCACTGGTTGGAGGCAGAATCTGTAGAGGCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| CDS-3UTR GCA 90 bp | TCCAAGGCCTGGAGCACTGACCATCCAGGAGCCTCTGGCCTCAGGCCAAGGACACCAGAGTGTGCAGGCTaGCGTTGCTTCGCCACAACT | + |
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Preference number: 4 (lower is better) Translates to: SKAWSTDHPGASGLRPRTPECAG*RCFATT Trigger: AGTTGTGGCGAAGCAACGGCAGCCTGCACACTCTGG...TGTCCTTGGCCTGAGGCCAGAGGCTCCTGGATGGTCAGTGCTCCAGGCCTTGGA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| CDS-3UTR GCA 90 bp | GGCTCCAACCTACTTTACCAGGCCACACCCACTGTTGGAAGCAGGGCTAGACCCGGAGGTTGCGCTCGCTaGGCTCAGCTTTCTGGGCCA | + |
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Preference number: 4 (lower is better) Translates to: GSNLLYQATPTVGSRARPGGCAR*AQLSGP Trigger: TGGCCCAGAAAGCTGAGCGCAGCGAGCGCAACCTCC...GGGTCTAGCCCTGCTTCCAACAGTGGGTGTGGCCTGGTAAAGTAGGTTGGAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| CDS-3UTR CCA 90 bp | TTTACCAGGCCACACCCACTGTTGGAAGCAGGGCTAGACCCTCCCTGGGTGTGGCTTCGCCACAACTTCTaGCCCTTGTGGGCTGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: FTRPHPLLEAGLDPPWVWLRHNF*PLWAAR Trigger: CCTGGCAGCCCACAAGGGCCAGAAGTTGTGGCGAAG...CCACACCCAGGGAGGGTCTAGCCCTGCTTCCAACAGTGGGTGTGGCCTGGTAAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| CDS-3UTR CCA 90 bp | CCATCCCTGATCTGGCCTCTACAGATTCTGCCTCCAACCAGTGCAAGGGAGGAGCGCAGAGCCTGCTCCTaGCCCCTAAGCCGCTCTTGC | + |
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Preference number: 4 (lower is better) Translates to: PSLIWPLQILPPTSAREERRACS*PLSRSC Trigger: GCAAGAGCGGCTTAGGGGCCAGGAGCAGGCTCTGCG...CTCCTCCCTTGCACTGGTTGGAGGCAGAATCTGTAGAGGCCAGATCAGGGATGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| CDS-3UTR GCA 90 bp | CTACAGATTCTGCCTCCAACCAGTGCAAGGGAGGAGCCTGCCATCTCAGGGTATCATCTGTCTCGCAGCTaGCTGGGGCTTCCTCCCGCG | + |
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Preference number: 4 (lower is better) Translates to: LQILPPTSAREEPAISGYHLSRS*LGLPPA Trigger: CGCGGGAGGAAGCCCCAGGCAGCTGCGAGACAGATG...ATACCCTGAGATGGCAGGCTCCTCCCTTGCACTGGTTGGAGGCAGAATCTGTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| CDS-3UTR GCA 90 bp | TCCAAGGCCTGGAGCACTGACCATCCAGGAGCCTCTGGCCTCAGGCCAAGGACACCCCCAGCAGTCCTCTaGTCTTGCAGTCATCTGTCT | + |
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Preference number: 4 (lower is better) Translates to: SKAWSTDHPGASGLRPRTPPAVL*SCSHLS Trigger: AGACAGATGACTGCAAGAGCAGAGGACTGCTGGGGG...TGTCCTTGGCCTGAGGCCAGAGGCTCCTGGATGGTCAGTGCTCCAGGCCTTGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| CDS-3UTR GCA 90 bp | GCCATCTCAGGGTATCTTCTGACAGTATGCCCACTGTCAGCACACTTGGCGAGCCTCTTGCAGCAGCTCTaGCCTCAGCTGCTCGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: AISGYLLTVCPLSAHLASLLQQL*PQLLGP Trigger: GGGGCCGAGCAGCTGAGGGCAGAGCTGCTGCAAGAG...GCTCGCCAAGTGTGCTGACAGTGGGCATACTGTCAGAAGATACCCTGAGATGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| CDS-3UTR GCA 90 bp | CCATCCCTGATCTGGCCTCTACAGATTCTGCCTCCAACCAGTGCAAGGGAGGAGCCCCTAAGCCGCTCTTaGAGCAGCTCTGCCCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: PSLIWPLQILPPTSAREEPLSRS*SSSALS Trigger: GCTGAGGGCAGAGCTGCTGCAAGAGCGGCTTAGGGG...CTCCTCCCTTGCACTGGTTGGAGGCAGAATCTGTAGAGGCCAGATCAGGGATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| CDS-3UTR CCA 90 bp | GGCGTCCCATCCCTGATCTGGCCTCTACAGATTCTGCCTCCAACCAGTGCAAGGTACCTACGCTGCCCATaGCAATGCCAGCAGGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: GVPSLIWPLQILPPTSARYLRCP*QCQQGL Trigger: CAGGCCCTGCTGGCATTGCCATGGGCAGCGTAGGTA...CCTTGCACTGGTTGGAGGCAGAATCTGTAGAGGCCAGATCAGGGATGGGACGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| CDS-3UTR CCA 90 bp | CGTCCCATCCCTGATCTGGCCTCTACAGATTCTGCCTCCAACCAGTGCAAGGGAGAGGGTGGCATAGTCTaGCTCGTTCCGAGGGGCTCG | + |
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Preference number: 4 (lower is better) Translates to: RPIPDLASTDSASNQCKGEGGIV*LVPRGS Trigger: CGAGCCCCTCGGAACGAGCCAGACTATGCCACCCTC...TCCCTTGCACTGGTTGGAGGCAGAATCTGTAGAGGCCAGATCAGGGATGGGACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| CDS-3UTR CCA 90 bp | CTACTTTACCAGGCCACACCCACTGTTGGAAGCAGGGCTAGACCCTCCCTGGGTTCGGGCTTCTTCCTCTaGCCGAGCATTGGGGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LLYQATPTVGSRARPSLGSGFFL*PSIGVS Trigger: GCTGACCCCAATGCTCGGCCAGAGGAAGAAGCCCGA...ACCCAGGGAGGGTCTAGCCCTGCTTCCAACAGTGGGTGTGGCCTGGTAAAGTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| CDS-3UTR GCA 90 bp | TGGAGGTGGCCAATCTTCCCAACCCTGGCTCCTTCCATGGAGGAAGACCTCAGGCAAGTCTGCCTCTCCTaGTCAAAGCGCAGAGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: WRWPIFPTLAPSMEEDLRQVCLS*SKRRAC Trigger: GCAGGCTCTGCGCTTTGAGCAGGAGAGGCAGACTTG...CCTGAGGTCTTCCTCCATGGAAGGAGCCAGGGTTGGGAAGATTGGCCACCTCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| CDS-3UTR GCA 90 bp | CTGATCTGGCCTCTACAGATTCTGCCTCCAACCAGTGCAAGGGAGGAGCCTGCCTCCTCCTGCCAAGTCTaGCTCTCCTGCTCAAAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: LIWPLQILPPTSAREEPASSCQV*LSCSKR Trigger: GCGCTTTGAGCAGGAGAGGCAGACTTGGCAGGAGGA...GGCAGGCTCCTCCCTTGCACTGGTTGGAGGCAGAATCTGTAGAGGCCAGATCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| CDS-3UTR TCA 90 bp | CTGATCTGGCCTCTACAGATTCTGCCTCCAACCAGTGCAAGGGAGGAGCCTGCCGGAGATGCAGGTAGCTaGAGAACTCTCGTTGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LIWPLQILPPTSAREEPAGDAGS*RTLVGP Trigger: TGGGCCAACGAGAGTTCTTCAGCTACCTGCATCTCC...GGCAGGCTCCTCCCTTGCACTGGTTGGAGGCAGAATCTGTAGAGGCCAGATCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| CDS-3UTR GCA 90 bp | GGCGTCCCATCCCTGATCTGGCCTCTACAGATTCTGCCTCCAACCAGTGCAAGGCAGCTCGTGTTCAAGTaGCTGGTTGCGGCGGTACAT | + |
|
Preference number: 4 (lower is better) Translates to: GVPSLIWPLQILPPTSARQLVFK*LVAAVH Trigger: ATGTACCGCCGCAACCAGGCACTTGAACACGAGCTG...CCTTGCACTGGTTGGAGGCAGAATCTGTAGAGGCCAGATCAGGGATGGGACGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| CDS-3UTR CCA 90 bp | CTGGCCTCTACAGATTCTGCCTCCAACCAGTGCAAGGGAGGAGCCTGCCATCTCAACTTCTGGCCCTTGTaGGCTGCCAGGCTTTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: LASTDSASNQCKGGACHLNFWPL*AARLCM Trigger: CATGCAAAGCCTGGCAGCCCACAAGGGCCAGAAGTT...GAGATGGCAGGCTCCTCCCTTGCACTGGTTGGAGGCAGAATCTGTAGAGGCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| CDS-3UTR CCA 90 bp | GTGCTTTTTATTCTGGAGGTGGCCAATCTTCCCAACCCTGGCTCCTTCCATGGACCCAGGGCTCAGGGGTaGGTGACAGGCCAGAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VLFILEVANLPNPGSFHGPRAQG*VTGQSV Trigger: CACACTCTGGCCTGTCACCCACCCCTGAGCCCTGGG...TCCATGGAAGGAGCCAGGGTTGGGAAGATTGGCCACCTCCAGAATAAAAAGCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| CDS-3UTR CCA 90 bp | CTGGCCTCTACAGATTCTGCCTCCAACCAGTGCAAGGGAGGAGCCTGCCATCTCTCGTGTTCAAGTGCCTaGTTGCGGCGGTACATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LASTDSASNQCKGGACHLSCSSA*LRRYMS Trigger: GGACATGTACCGCCGCAACCAGGCACTTGAACACGA...GAGATGGCAGGCTCCTCCCTTGCACTGGTTGGAGGCAGAATCTGTAGAGGCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| CDS-3UTR TCA 90 bp | GCCATCTCAGGGTATCTTCTGACAGTATGCCCACTGTCAGCACACTTGGCGAGCCGCCGCTGCTCCTGTTaGGCCATAAACAGCTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: AISGYLLTVCPLSAHLASRRCSC*AINSCS Trigger: ACTGCAGCTGTTTATGGCTCAACAGGAGCAGCGGCG...GCTCGCCAAGTGTGCTGACAGTGGGCATACTGTCAGAAGATACCCTGAGATGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| CDS-3UTR GCA 90 bp | TGGAGCACTGACCATCCAGGAGCCTCTGGCCTCAGGCCAAGGACAATCTTATCAACAGGCTACCTACGCTaGCCATGGCAATGCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: WSTDHPGASGLRPRTILSTGYLR*PWQCQQ Trigger: CTGCTGGCATTGCCATGGGCAGCGTAGGTAGCCTGT...TGATAAGATTGTCCTTGGCCTGAGGCCAGAGGCTCCTGGATGGTCAGTGCTCCA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| CDS-3UTR GCA 90 bp | TTTACCAGGCCACACCCACTGTTGGAAGCAGGGCTAGACCCTCCCTGGGTGTGGCTCGCTTGGTGGTCTTaGCATCTTTCTTGGGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: FTRPHPLLEAGLDPPWVWLAWWS*HLSWGD Trigger: ATCTCCCCAAGAAAGATGGCAAGACCACCAAGCGAG...CCACACCCAGGGAGGGTCTAGCCCTGCTTCCAACAGTGGGTGTGGCCTGGTAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| CDS-3UTR GCA 90 bp | ACGTGCTTTTTATTCTGGAGGTGGCCAATCTTCCCAACCCTGGCTCCTTCCATGAGCGTGAAGCAACTGTaGACGGGCCTGACTGGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: TCFLFWRWPIFPTLAPSMSVKQL*TGLTGP Trigger: CGGGCCAGTCAGGCCCGTGCACAGTTGCTTCACGCT...CATGGAAGGAGCCAGGGTTGGGAAGATTGGCCACCTCCAGAATAAAAAGCACGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| CDS-3UTR GCA 90 bp | CCATCCCTGATCTGGCCTCTACAGATTCTGCCTCCAACCAGTGCAAGGGAGGAGGCAGTCCTCTGCTCTTaGAGTCATCTGTCTCGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PSLIWPLQILPPTSAREEAVLCS*SHLSRS Trigger: GCTGCGAGACAGATGACTGCAAGAGCAGAGGACTGC...CTCCTCCCTTGCACTGGTTGGAGGCAGAATCTGTAGAGGCCAGATCAGGGATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| CDS-3UTR GCA 90 bp | GTGCTTTTTATTCTGGAGGTGGCCAATCTTCCCAACCCTGGCTCCTTCCATGGAAGCTCTGCCCTCAGCTaGTCGGCCCCTTCTCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VLFILEVANLPNPGSFHGSSALS*SAPSLA Trigger: AGCCAGAGAAGGGGCCGAGCAGCTGAGGGCAGAGCT...TCCATGGAAGGAGCCAGGGTTGGGAAGATTGGCCACCTCCAGAATAAAAAGCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| CDS-3UTR CCA 90 bp | CTACAGATTCTGCCTCCAACCAGTGCAAGGGAGGAGCCTGCCATCTCAGGGTATCCCGGTAGTAGAGGGTaGCATAGTCTGGCTCGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LQILPPTSAREEPAISGYPGSRG*HSLARS Trigger: GGAACGAGCCAGACTATGCCACCCTCTACTACCGGG...ATACCCTGAGATGGCAGGCTCCTCCCTTGCACTGGTTGGAGGCAGAATCTGTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| CDS-3UTR CCA 90 bp | TTTATTCTGGAGGTGGCCAATCTTCCCAACCCTGGCTCCTTCCATGGAGGAAGAGAGGTCCAGACTCCTTaGGGCTCCTTGGAGCACGGT | + |
|
Preference number: 4 (lower is better) Translates to: FILEVANLPNPGSFHGGREVQTP*GSLEHG Trigger: ACCGTGCTCCAAGGAGCCCCAAGGAGTCTGGACCTC...TCTTCCTCCATGGAAGGAGCCAGGGTTGGGAAGATTGGCCACCTCCAGAATAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| CDS-3UTR GCA 90 bp | CAAACACATAAGACCAGAGACTGCAATGGGGTATATTCTTTCCATTGTTGGGAAAGGAGCCCATCGGGCTaGCGGGAGCCCCGGGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QTHKTRDCNGVYSFHCWERSPSG*REPREP Trigger: TGGCTCCCGGGGCTCCCGGCAGCCCGATGGGCTCCT...TTCCCAACAATGGAAAGAATATACCCCATTGCAGTCTCTGGTCTTATGTGTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| CDS-3UTR GCA 90 bp | ACGTGCTTTTTATTCTGGAGGTGGCCAATCTTCCCAACCCTGGCTCCTTCCATGTGTGCAGGCTGCCGTTaGTTCGCCACAACTTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: TCFLFWRWPIFPTLAPSMCAGCR*FATTSG Trigger: GCCAGAAGTTGTGGCGAAGCAACGGCAGCCTGCACA...CATGGAAGGAGCCAGGGTTGGGAAGATTGGCCACCTCCAGAATAAAAAGCACGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| CDS-3UTR GCA 90 bp | CCATCCCTGATCTGGCCTCTACAGATTCTGCCTCCAACCAGTGCAAGGGAGGAGCAAACTGAAGATCTCTaGCAGCTTCTGTGCCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PSLIWPLQILPPTSAREEQTEDL*QLLCQL Trigger: GAGCTGGCACAGAAGCTGGCAGAGATCTTCAGTTTG...CTCCTCCCTTGCACTGGTTGGAGGCAGAATCTGTAGAGGCCAGATCAGGGATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| CDS-3UTR TCA 90 bp | TTTATTCTGGAGGTGGCCAATCTTCCCAACCCTGGCTCCTTCCATGGAGGAAGAAGCCCACAGGAGGCTTaGACACAGAAGGACGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: FILEVANLPNPGSFHGGRSPQEA*TQKDGF Trigger: GAATCCGTCCTTCTGTGTTCAAGCCTCCTGTGGGCT...TCTTCCTCCATGGAAGGAGCCAGGGTTGGGAAGATTGGCCACCTCCAGAATAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| CDS-3UTR TCA 90 bp | TGGAGCACTGACCATCCAGGAGCCTCTGGCCTCAGGCCAAGGACAATCTTATCATTCTGGGCCACCTCATaGAGTCGTTCCACATACAGA | + |
|
Preference number: 4 (lower is better) Translates to: WSTDHPGASGLRPRTILSFWATS*SRSTYR Trigger: TCTGTATGTGGAACGACTTCATGAGGTGGCCCAGAA...TGATAAGATTGTCCTTGGCCTGAGGCCAGAGGCTCCTGGATGGTCAGTGCTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| CDS-3UTR GCA 90 bp | TGGAGCACTGACCATCCAGGAGCCTCTGGCCTCAGGCCAAGGACAATCTTATCATCAGGGGAAAAGTCTTaGCGTTCCAACAGGCTACCT | + |
|
Preference number: 4 (lower is better) Translates to: WSTDHPGASGLRPRTILSSGEKS*RSNRLP Trigger: AGGTAGCCTGTTGGAACGGCAAGACTTTTCCCCTGA...TGATAAGATTGTCCTTGGCCTGAGGCCAGAGGCTCCTGGATGGTCAGTGCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| CDS-3UTR CCA 90 bp | GTGCTTTTTATTCTGGAGGTGGCCAATCTTCCCAACCCTGGCTCCTTCCATGGAGAGGGGCTCGCTTGGTaGTCTTGCCATCTTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VLFILEVANLPNPGSFHGEGLAW*SCHLSW Trigger: CCAAGAAAGATGGCAAGACCACCAAGCGAGCCCCTC...TCCATGGAAGGAGCCAGGGTTGGGAAGATTGGCCACCTCCAGAATAAAAAGCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| CDS-3UTR CCA 90 bp | TTTTTATTCTGGAGGTGGCCAATCTTCCCAACCCTGGCTCCTTCCATGGAGGAACAAAACTACCCCCGCTaGAAGAGTCCGACAGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FLFWRWPIFPTLAPSMEEQNYPR*KSPTGW Trigger: CCAGCCTGTCGGACTCTTCCAGCGGGGGTAGTTTTG...TTCCTCCATGGAAGGAGCCAGGGTTGGGAAGATTGGCCACCTCCAGAATAAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| CDS-3UTR GCA 90 bp | TTTATTCTGGAGGTGGCCAATCTTCCCAACCCTGGCTCCTTCCATGGAGGAAGACGGCTGCCCCGAAGTTaGGTCTTCAAACTGAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: FILEVANLPNPGSFHGGRRLPRS*VFKLKI Trigger: GATCTTCAGTTTGAAGACGCAACTTCGGGGCAGCCG...TCTTCCTCCATGGAAGGAGCCAGGGTTGGGAAGATTGGCCACCTCCAGAATAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| CDS-3UTR GCA 90 bp | ACGTGCTTTTTATTCTGGAGGTGGCCAATCTTCCCAACCCTGGCTCCTTCCATGGTTCAAGTGCCTGGTTaGGGCGGTACATGTCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: TCFLFWRWPIFPTLAPSMVQVPG*GGTCPC Trigger: ACATGGACATGTACCGCCGCAACCAGGCACTTGAAC...CATGGAAGGAGCCAGGGTTGGGAAGATTGGCCACCTCCAGAATAAAAAGCACGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| CDS-3UTR CCA 90 bp | TTTATTCTGGAGGTGGCCAATCTTCCCAACCCTGGCTCCTTCCATGGAGGAAGACTGCCAGGCTTTGCATaGACAAGAAGCCTTTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FILEVANLPNPGSFHGGRLPGFA*TRSLSQ Trigger: CTGGGAAAGGCTTCTTGTCCATGCAAAGCCTGGCAG...TCTTCCTCCATGGAAGGAGCCAGGGTTGGGAAGATTGGCCACCTCCAGAATAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| CDS-3UTR GCA 90 bp | CAAACACATAAGACCAGAGACTGCAATGGGGTATATTCTTTCCATTGTTGGGAAGGGCTTGTGCCCGGCTaGCCCGAAGTTGCGTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QTHKTRDCNGVYSFHCWEGLVPG*PEVASS Trigger: TGAAGACGCAACTTCGGGGCAGCCGGGCACAAGCCC...TTCCCAACAATGGAAAGAATATACCCCATTGCAGTCTCTGGTCTTATGTGTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| CDS-3UTR GCA 90 bp | CATAAGACCAGAGACTGCAATGGGGTATATTCTTTCCATTGTTGGGAACATAGAGCTGCAGTTGGAGGTTaGGCTCGCTGCGCTCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: HKTRDCNGVYSFHCWEHRAAVGG*ARCAQL Trigger: AAGCTGAGCGCAGCGAGCGCAACCTCCAACTGCAGC...TCTATGTTCCCAACAATGGAAAGAATATACCCCATTGCAGTCTCTGGTCTTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| CDS-3UTR CCA 90 bp | GGACAATCTTATCAACTAGGCCTCCTCATAAAAACGTGCTTTTTATTCTGGAGGGCTGGGGCCAGTACCTaGACTACGGCCAAAACTACC | + |
|
Preference number: 4 (lower is better) Translates to: GQSYQLGLLIKTCFLFWRAGAST*TTAKTT Trigger: GGTAGTTTTGGCCGTAGTCCAGGTACTGGCCCCAGC...CCTCCAGAATAAAAAGCACGTTTTTATGAGGAGGCCTAGTTGATAAGATTGTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| CDS GCA 90 bp | GCGCAGAGCCTGCTCCTGGCCCCTAAGCCGCTCTTGCAGCAGCTCTaGCCTCAGCTGCTCGGCCCCTTCTCTGGCTTCACTGCCTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: AQSLLLAPKPLLQQL*PQLLGPFSGFTASC Trigger: GCAGGAGGCAGTGAAGCCAGAGAAGGGGCCGAGCAGCTGAGGGCAGAGCTGCTGCAAGAGCGGCTTAGGGGCCAGGAGCAGGCTCTGCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| CDS TCA 90 bp | TGGAAGAGTCCGACAGGCTGGGCTCAGGGCCACCTTCATCTAGGCTaGGAGCGTGAAGCAACTGTGCACGGGCCTGACTGGCCCGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: WKSPTGWAQGHLHLG*EREATVHGPDWPEA Trigger: GGCCTCGGGCCAGTCAGGCCCGTGCACAGTTGCTTCACGCTCTCAGCCTAGATGAAGGTGGCCCTGAGCCCAGCCTGTCGGACTCTTCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| CDS GCA 90 bp | CAGGGCTCAGGGGTGGGTGACAGGCCAGAGTGTGCAGGCTGCCGTTaGTTCGCCACAACTTCTGGCCCTTGTGGGCTGCCAGGCTTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: QGSGVGDRPECAGCR*FATTSGPCGLPGFA Trigger: TGCAAAGCCTGGCAGCCCACAAGGGCCAGAAGTTGTGGCGAAGCAACGGCAGCCTGCACACTCTGGCCTGTCACCCACCCCTGAGCCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| CDS GCA 90 bp | TCCTGCTCAAAGCGCAGAGCCTGCTCCTGGCCCCTAAGCCGCTCTTaGAGCAGCTCTGCCCTCAGCTGCTCGGCCCCTTCTCTGGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SCSKRRACSWPLSRS*SSSALSCSAPSLAS Trigger: TGAAGCCAGAGAAGGGGCCGAGCAGCTGAGGGCAGAGCTGCTGCAAGAGCGGCTTAGGGGCCAGGAGCAGGCTCTGCGCTTTGAGCAGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| CDS CCA 90 bp | GATCTCCGCGGTCTTCTGGCACACCTCCCATCGGGCTTCTTCCTCTaGCCGAGCATTGGGGTCAGCCTCCATGGAGGACCCAGACGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: DLRGLLAHLPSGFFL*PSIGVSLHGGPRRP Trigger: CGGACGTCTGGGTCCTCCATGGAGGCTGACCCCAATGCTCGGCCAGAGGAAGAAGCCCGATGGGAGGTGTGCCAGAAGACCGCGGAGATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| CDS CCA 90 bp | TCCTGCCAAGTCTGCCTCTCCTGCTCAAAGCGCAGAGCCTGCTCCTaGCCCCTAAGCCGCTCTTGCAGCAGCTCTGCCCTCAGCTGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: SCQVCLSCSKRRACS*PLSRSCSSSALSCS Trigger: CGAGCAGCTGAGGGCAGAGCTGCTGCAAGAGCGGCTTAGGGGCCAGGAGCAGGCTCTGCGCTTTGAGCAGGAGAGGCAGACTTGGCAGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| CDS TCA 90 bp | GAGCCTGGGCTTGTGCCCGGCTGCCCCGAAGTTGCGTCTTCAAACTaGAGATCTCTGCCAGCTTCTGTGCCAGCTCCGCCTGGGCTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: EPGLVPGCPEVASSN*RSLPASVPAPPGLP Trigger: GGGAAGCCCAGGCGGAGCTGGCACAGAAGCTGGCAGAGATCTTCAGTTTGAAGACGCAACTTCGGGGCAGCCGGGCACAAGCCCAGGCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| CDS GCA 90 bp | CTCTGCCCTCAGCTGCTCGGCCCCTTCTCTGGCTTCACTGCCTCCTaGCTCCCCCAGCAGTCCTCTGCTCTTGCAGTCATCTGTCTCGCA | + |
|
Preference number: 5 (lower is better) Translates to: LCPQLLGPFSGFTAS*LPQQSSALAVICLA Trigger: TGCGAGACAGATGACTGCAAGAGCAGAGGACTGCTGGGGGAGGCAGGAGGCAGTGAAGCCAGAGAAGGGGCCGAGCAGCTGAGGGCAGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| CDS GCA 90 bp | TTTTCCTCCTGCCAAGTCTGCCTCTCCTGCTCAAAGCGCAGAGCCTaGTCCTGGCCCCTAAGCCGCTCTTGCAGCAGCTCTGCCCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: FSSCQVCLSCSKRRA*SWPLSRSCSSSALS Trigger: GCTGAGGGCAGAGCTGCTGCAAGAGCGGCTTAGGGGCCAGGAGCAGGCTCTGCGCTTTGAGCAGGAGAGGCAGACTTGGCAGGAGGAAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| CDS-3UTR CAA 90 bp | CGGGGCGGGCGTCCCATCCCTGATCTGGCCTCTACAGATTCTGCCTCCAACCAGTTCCGAGGGGCTCGCTaGGTGGTCTTGCCATCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RGGRPIPDLASTDSASNQFRGAR*VVLPSF Trigger: GAAAGATGGCAAGACCACCAAGCGAGCCCCTCGGAA...CTGGTTGGAGGCAGAATCTGTAGAGGCCAGATCAGGGATGGGACGCCCGCCCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
||
| CDS GCA 90 bp | CGGGAGCCAGCCAGTGCGGCCCGAAGTTCTTCAGGGGAAAAGTCTTaGCGTTCCAACAGGCTACCTACGCTGCCCATGGCAATGCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: REPASAARSSSGEKS*RSNRLPTLPMAMPA Trigger: TGCTGGCATTGCCATGGGCAGCGTAGGTAGCCTGTTGGAACGGCAAGACTTTTCCCCTGAAGAACTTCGGGCCGCACTGGCTGGCTCCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001080.16 ENSMUST00000142721.2 ENSMUST00000156835.8 |
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| CDS GCA 90 bp | GTGCAGGCTGCCGTTGCTTCGCCACAACTTCTGGCCCTTGTGGGCTaGCAGGCTTTGCATGGACAAGAAGCCTTTCCCAGAGCCCACAGG | + |
|
Preference number: 5 (lower is better) Translates to: VQAAVASPQLLALVG*QALHGQEAFPRAHR Trigger: CCTGTGGGCTCTGGGAAAGGCTTCTTGTCCATGCAAAGCCTGGCAGCCCACAAGGGCCAGAAGTTGTGGCGAAGCAACGGCAGCCTGCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001080.16 ENSMUST00000156835.8 |
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| CDS CCA 90 bp | GCTTCCCGGAGCTGCTGTTTCAACAGACTGATCTCCGCGGTCTTCTaGCACACCTCCCATCGGGCTTCTTCCTCTGGCCGAGCATTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: ASRSCCFNRLISAVF*HTSHRASSSGRALG Trigger: CCCCAATGCTCGGCCAGAGGAAGAAGCCCGATGGGAGGTGTGCCAGAAGACCGCGGAGATCAGTCTGTTGAAACAGCAGCTCCGGGAAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| CDS-3UTR CAA 90 bp | CCATCCCTGATCTGGCCTCTACAGATTCTGCCTCCAACCAGTGCAAGGGAGGAGGCCCCTAAGCCGCTCTaGCAGCAGCTCTGCCCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: PSLIWPLQILPPTSAREEAPKPL*QQLCPQ Trigger: CTGAGGGCAGAGCTGCTGCAAGAGCGGCTTAGGGGC...CTCCTCCCTTGCACTGGTTGGAGGCAGAATCTGTAGAGGCCAGATCAGGGATGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
||
| CDS TCA 90 bp | TTCGGCACTTGTCAAAGCGACCCCGCTCAGGCAGGGAAGTCTTGCTaGAGTCACCAGCCCGAGGATGCTCCCGGTAGTAGAGGGTGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: FGTCQSDPAQAGKSC*SHQPEDAPGSRGWH Trigger: ATGCCACCCTCTACTACCGGGAGCATCCTCGGGCTGGTGACTTCAGCAAGACTTCCCTGCCTGAGCGGGGTCGCTTTGACAAGTGCCGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001080.16 ENSMUST00000142721.2 ENSMUST00000156835.8 |
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| CDS GCA 90 bp | CCAGGATGTAGGAGGCTCCCGCAGCAGCCGCAGCTCGTGTTCAAGTaGCTGGTTGCGGCGGTACATGTCCATGTAGCTCCCTTGGATTTC | + |
|
Preference number: 5 (lower is better) Translates to: PGCRRLPQQPQLVFK*LVAAVHVHVAPLDF Trigger: GAAATCCAAGGGAGCTACATGGACATGTACCGCCGCAACCAGGCACTTGAACACGAGCTGCGGCTGCTGCGGGAGCCTCCTACATCCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
||
| CDS CCA 90 bp | GTCACCAGCCCGAGGATGCTCCCGGTAGTAGAGGGTGGCATAGTCTaGCTCGTTCCGAGGGGCTCGCTTGGTGGTCTTGCCATCTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: VTSPRMLPVVEGGIV*LVPRGSLGGLAIFL Trigger: AAGAAAGATGGCAAGACCACCAAGCGAGCCCCTCGGAACGAGCCAGACTATGCCACCCTCTACTACCGGGAGCATCCTCGGGCTGGTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001080.16 ENSMUST00000142721.2 ENSMUST00000156835.8 |
||
| CDS CCA 90 bp | AGAGTGTGCAGGCTGCCGTTGCTTCGCCACAACTTCTGGCCCTTGTaGGCTGCCAGGCTTTGCATGGACAAGAAGCCTTTCCCAGAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: RVCRLPLLRHNFWPL*AARLCMDKKPFPEP Trigger: GGGCTCTGGGAAAGGCTTCTTGTCCATGCAAAGCCTGGCAGCCCACAAGGGCCAGAAGTTGTGGCGAAGCAACGGCAGCCTGCACACTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001080.16 ENSMUST00000156835.8 |
||
| CDS GCA 90 bp | CCGTTGCTTCGCCACAACTTCTGGCCCTTGTGGGCTGCCAGGCTTTaGATGGACAAGAAGCCTTTCCCAGAGCCCACAGGAGGCTTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: PLLRHNFWPLWAARL*MDKKPFPEPTGGLN Trigger: GTTCAAGCCTCCTGTGGGCTCTGGGAAAGGCTTCTTGTCCATGCAAAGCCTGGCAGCCCACAAGGGCCAGAAGTTGTGGCGAAGCAACGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001080.16 ENSMUST00000156835.8 |
||
| CDS-3UTR CAA 90 bp | GGCGTCCCATCCCTGATCTGGCCTCTACAGATTCTGCCTCCAACCAGTGCAAGGCATAAACAGCTGCAGTaGGAGGTTGCGCTCGCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: GVPSLIWPLQILPPTSARHKQLQ*EVALAA Trigger: CGCAGCGAGCGCAACCTCCAACTGCAGCTGTTTATG...CCTTGCACTGGTTGGAGGCAGAATCTGTAGAGGCCAGATCAGGGATGGGACGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
||
| CDS-3UTR CAA 90 bp | TTTACCAGGCCACACCCACTGTTGGAAGCAGGGCTAGACCCTCCCTGGGTGTGGGTCCATGTAGCTCCCTaGGATTTCTCGCTGGTAGCG | + |
|
Preference number: 5 (lower is better) Translates to: FTRPHPLLEAGLDPPWVWVHVAP*DFSLVA Trigger: CGCTACCAGCGAGAAATCCAAGGGAGCTACATGGAC...CCACACCCAGGGAGGGTCTAGCCCTGCTTCCAACAGTGGGTGTGGCCTGGTAAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
||
| CDS TCA 90 bp | CTCGCTTGGTGGTCTTGCCATCTTTCTTGGGGAGATGCAGGTAGCTaGAGAACTCTCGTTGGCCCAAGCCTTTCCGGAGGAGCCCATCGG | + |
|
Preference number: 5 (lower is better) Translates to: LAWWSCHLSWGDAGS*RTLVGPSLSGGAHR Trigger: CCGATGGGCTCCTCCGGAAAGGCTTGGGCCAACGAGAGTTCTTCAGCTACCTGCATCTCCCCAAGAAAGATGGCAAGACCACCAAGCGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001080.16 ENSMUST00000142721.2 ENSMUST00000156835.8 |
||
| CDS GCA 90 bp | GCCCCGAAGTTGCGTCTTCAAACTGAAGATCTCTGCCAGCTTCTGTaGCAGCTCCGCCTGGGCTTCCCGGAGCTGCTGTTTCAACAGACT | + |
|
Preference number: 5 (lower is better) Translates to: APKLRLQTEDLCQLL*QLRLGFPELLFQQT Trigger: AGTCTGTTGAAACAGCAGCTCCGGGAAGCCCAGGCGGAGCTGGCACAGAAGCTGGCAGAGATCTTCAGTTTGAAGACGCAACTTCGGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
||
| CDS-3UTR CAA 90 bp | GGCGTCCCATCCCTGATCTGGCCTCTACAGATTCTGCCTCCAACCAGTGCAAGGGAGCCCACAGGAGGCTaGAACACAGAAGGACGGATT | + |
|
Preference number: 5 (lower is better) Translates to: GVPSLIWPLQILPPTSAREPTGG*NTEGRI Trigger: AATCCGTCCTTCTGTGTTCAAGCCTCCTGTGGGCTC...CCTTGCACTGGTTGGAGGCAGAATCTGTAGAGGCCAGATCAGGGATGGGACGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
||
| CDS-3UTR CAA 90 bp | CTACTTTACCAGGCCACACCCACTGTTGGAAGCAGGGCTAGACCCTCCCTGGGTCCGGCTGCCCCGAAGTaGCGTCTTCAAACTGAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: LLYQATPTVGSRARPSLGPAAPK*RLQTED Trigger: ATCTTCAGTTTGAAGACGCAACTTCGGGGCAGCCGG...ACCCAGGGAGGGTCTAGCCCTGCTTCCAACAGTGGGTGTGGCCTGGTAAAGTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
||
| CDS-3UTR CAA 90 bp | GGCGTCCCATCCCTGATCTGGCCTCTACAGATTCTGCCTCCAACCAGTGCAAGGAGCAGTCCTCTGCTCTaGCAGTCATCTGTCTCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GVPSLIWPLQILPPTSARSSPLL*QSSVSQ Trigger: CTGCGAGACAGATGACTGCAAGAGCAGAGGACTGCT...CCTTGCACTGGTTGGAGGCAGAATCTGTAGAGGCCAGATCAGGGATGGGACGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
||
| CDS-3UTR CAA 90 bp | GGCGTCCCATCCCTGATCTGGCCTCTACAGATTCTGCCTCCAACCAGTGCAAGGTGTTCAAGTGCCTGGTaGCGGCGGTACATGTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: GVPSLIWPLQILPPTSARCSSAW*RRYMSM Trigger: CATGGACATGTACCGCCGCAACCAGGCACTTGAACA...CCTTGCACTGGTTGGAGGCAGAATCTGTAGAGGCCAGATCAGGGATGGGACGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
||
| CDS TCA 90 bp | GGCTTTGCATGGACAAGAAGCCTTTCCCAGAGCCCACAGGAGGCTTaGACACAGAAGGACGGATTCGGCACTTGTCAAAGCGACCCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: GFAWTRSLSQSPQEA*TQKDGFGTCQSDPA Trigger: AGCGGGGTCGCTTTGACAAGTGCCGAATCCGTCCTTCTGTGTTCAAGCCTCCTGTGGGCTCTGGGAAAGGCTTCTTGTCCATGCAAAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001080.16 ENSMUST00000156835.8 |
||
| CDS-3UTR CAA 90 bp | GCCATCTCAGGGTATCTTCTGACAGTATGCCCACTGTCAGCACACTTGGCGAGCTCAGGCAGGGAAGTCTaGCTGAAGTCACCAGCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: AISGYLLTVCPLSAHLASSGREV*LKSPAR Trigger: TCGGGCTGGTGACTTCAGCAAGACTTCCCTGCCTGA...GCTCGCCAAGTGTGCTGACAGTGGGCATACTGTCAGAAGATACCCTGAGATGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
||
| CDS-3UTR CAA 90 bp | TTTATTCTGGAGGTGGCCAATCTTCCCAACCCTGGCTCCTTCCATGGAGGAAGAAGCTGCAGTTGGAGGTaGCGCTCGCTGCGCTCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: FILEVANLPNPGSFHGGRSCSWR*RSLRSA Trigger: AGCTGAGCGCAGCGAGCGCAACCTCCAACTGCAGCT...TCTTCCTCCATGGAAGGAGCCAGGGTTGGGAAGATTGGCCACCTCCAGAATAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
||
| CDS TCA 90 bp | CGCTTCAGCTCAGACAACCACAACCGCTGGCGCTCCTCTAGCACCTaGGTAAAGGAGTTAGAAACATCCTGGTCACCGAGGTCCCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RFSSDNHNRWRSSST*VKELETSWSPRSLL Trigger: CAAGAGGGACCTCGGTGACCAGGATGTTTCTAACTCCTTTACTCAGGTGCTAGAGGAGCGCCAGCGGTTGTGGTTGTCTGAGCTGAAGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
||
| CDS TCA 90 bp | AGTTGGAGGTTGCGCTCGCTGCGCTCAGCTTTCTGGGCCACCTCATaGAGTCGTTCCACATACAGACGCTTCAGCTCAGACAACCACAAC | + |
|
Preference number: 5 (lower is better) Translates to: SWRLRSLRSAFWATS*SRSTYRRFSSDNHN Trigger: GTTGTGGTTGTCTGAGCTGAAGCGTCTGTATGTGGAACGACTTCATGAGGTGGCCCAGAAAGCTGAGCGCAGCGAGCGCAACCTCCAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
||
| CDS-3UTR CAA 90 bp | ACGTGCTTTTTATTCTGGAGGTGGCCAATCTTCCCAACCCTGGCTCCTTCCATGCACAACTTCTGGCCCTaGTGGGCTGCCAGGCTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: TCFLFWRWPIFPTLAPSMHNFWP*WAARLC Trigger: GCAAAGCCTGGCAGCCCACAAGGGCCAGAAGTTGTG...CATGGAAGGAGCCAGGGTTGGGAAGATTGGCCACCTCCAGAATAAAAAGCACGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
||
| CDS-3UTR CAA 90 bp | TTTATTCTGGAGGTGGCCAATCTTCCCAACCCTGGCTCCTTCCATGGAGGAAGAGTGTGCAGGCTGCCGTaGCTTCGCCACAACTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: FILEVANLPNPGSFHGGRVCRLP*LRHNFW Trigger: CCAGAAGTTGTGGCGAAGCAACGGCAGCCTGCACAC...TCTTCCTCCATGGAAGGAGCCAGGGTTGGGAAGATTGGCCACCTCCAGAATAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
||
| CDS-3UTR CAA 90 bp | ACGTGCTTTTTATTCTGGAGGTGGCCAATCTTCCCAACCCTGGCTCCTTCCATGGCGCCGCTGCTCCTGTaGAGCCATAAACAGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: TCFLFWRWPIFPTLAPSMAPLLL*SHKQLQ Trigger: CTGCAGCTGTTTATGGCTCAACAGGAGCAGCGGCGC...CATGGAAGGAGCCAGGGTTGGGAAGATTGGCCACCTCCAGAATAAAAAGCACGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
||
| CDS-3UTR CAA 90 bp | CTACAGATTCTGCCTCCAACCAGTGCAAGGGAGGAGCCTGCCATCTCAGGGTATTTCAGGGGAAAAGTCTaGCCGTTCCAACAGGCTACC | + |
|
Preference number: 5 (lower is better) Translates to: LQILPPTSAREEPAISGYFRGKV*PFQQAT Trigger: GGTAGCCTGTTGGAACGGCAAGACTTTTCCCCTGAA...ATACCCTGAGATGGCAGGCTCCTCCCTTGCACTGGTTGGAGGCAGAATCTGTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
||
| CDS-3UTR CAA 90 bp | CATAAGACCAGAGACTGCAATGGGGTATATTCTTTCCATTGTTGGGAACATAGAGCTCGCTTGGTGGTCTaGCCATCTTTCTTGGGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: HKTRDCNGVYSFHCWEHRARLVV*PSFLGR Trigger: TCTCCCCAAGAAAGATGGCAAGACCACCAAGCGAGC...TCTATGTTCCCAACAATGGAAAGAATATACCCCATTGCAGTCTCTGGTCTTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
||
| CDS GCA 72 bp | GGGGCTTCCTCCCGCGGTGCCTGCTCCTGCAGGCTGTaGACTGCCTCCCGCAGCCTGGCTAGCTCAGCGTCC | + |
|
Preference number: 6 (lower is better) Translates to: GASSRGACSCRL*TASRSLASSAS Trigger: GGACGCTGAGCTAGCCAGGCTGCGGGAGGCAGTGCACAGCCTGCAGGAGCAGGCACCGCGGGAGGAAGCCCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
||
| CDS GCA 72 bp | CAGCTGCCTGGGGCTTCCTCCCGCGGTGCCTGCTCCTaGAGGCTGTGCACTGCCTCCCGCAGCCTGGCTAGC | + |
|
Preference number: 6 (lower is better) Translates to: QLPGASSRGACS*RLCTASRSLAS Trigger: GCTAGCCAGGCTGCGGGAGGCAGTGCACAGCCTGCAGGAGCAGGCACCGCGGGAGGAAGCCCCAGGCAGCTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
||
| CDS GCA 72 bp | GTCTCGCAGCTGCCTGGGGCTTCCTCCCGCGGTGCCTaGTCCTGCAGGCTGTGCACTGCCTCCCGCAGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: VSQLPGASSRGA*SCRLCTASRSL Trigger: CAGGCTGCGGGAGGCAGTGCACAGCCTGCAGGAGCAGGCACCGCGGGAGGAAGCCCCAGGCAGCTGCGAGAC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
||
| CDS CCA 72 bp | CCTGCTCCTGCAGGCTGTGCACTGCCTCCCGCAGCCTaGCTAGCTCAGCGTCCTGAGCCTGGGCTTGTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: PAPAGCALPPAA*LAQRPEPGLVP Trigger: GGGCACAAGCCCAGGCTCAGGACGCTGAGCTAGCCAGGCTGCGGGAGGCAGTGCACAGCCTGCAGGAGCAGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
||
| CDS CAA 90 bp | GCCCTGCTGAGCCCGCAGCTCCTTGCGCAGGCGCCGCTGCTCCTGTaGAGCCATAAACAGCTGCAGTTGGAGGTTGCGCTCGCTGCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: ALLSPQLLAQAPLLL*SHKQLQLEVALAAL Trigger: GAGCGCAGCGAGCGCAACCTCCAACTGCAGCTGTTTATGGCTCAACAGGAGCAGCGGCGCCTGCGCAAGGAGCTGCGGGCTCAGCAGGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| CDS GCA 72 bp | AAGCGCAGAGCCTGCTCCTGGCCCCTAAGCCGCTCTTaGAGCAGCTCTGCCCTCAGCTGCTCGGCCCCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: KRRACSWPLSRS*SSSALSCSAPS Trigger: AGAAGGGGCCGAGCAGCTGAGGGCAGAGCTGCTGCAAGAGCGGCTTAGGGGCCAGGAGCAGGCTCTGCGCTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
||
| CDS CCA 72 bp | CTTCTTCCTCTGGCCGAGCATTGGGGTCAGCCTCCATaGAGGACCCAGACGTCCGAGGCTCTGGGGCCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: LLPLAEHWGQPP*RTQTSEALGPG Trigger: GCCTGGCCCCAGAGCCTCGGACGTCTGGGTCCTCCATGGAGGCTGACCCCAATGCTCGGCCAGAGGAAGAAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
||
| CDS TCA 72 bp | GCCCGCAGCTCCTTGCGCAGGCGCCGCTGCTCCTGTTaGGCCATAAACAGCTGCAGTTGGAGGTTGCGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: ARSSLRRRRCSC*AINSCSWRLRS Trigger: CGAGCGCAACCTCCAACTGCAGCTGTTTATGGCTCAACAGGAGCAGCGGCGCCTGCGCAAGGAGCTGCGGGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
||
| CDS GCA 72 bp | GGCTCAGGGGTGGGTGACAGGCCAGAGTGTGCAGGCTaGCGTTGCTTCGCCACAACTTCTGGCCCTTGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: GSGVGDRPECAG*RCFATTSGPCG Trigger: CCCACAAGGGCCAGAAGTTGTGGCGAAGCAACGGCAGCCTGCACACTCTGGCCTGTCACCCACCCCTGAGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
||
| CDS GCA 72 bp | CTGCTCCTGGCCCCTAAGCCGCTCTTGCAGCAGCTCTaGCCTCAGCTGCTCGGCCCCTTCTCTGGCTTCACT | + |
|
Preference number: 6 (lower is better) Translates to: LLLAPKPLLQQL*PQLLGPFSGFT Trigger: AGTGAAGCCAGAGAAGGGGCCGAGCAGCTGAGGGCAGAGCTGCTGCAAGAGCGGCTTAGGGGCCAGGAGCAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
||
| CDS CCA 72 bp | GTCTGCCTCTCCTGCTCAAAGCGCAGAGCCTGCTCCTaGCCCCTAAGCCGCTCTTGCAGCAGCTCTGCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: VCLSCSKRRACS*PLSRSCSSSAL Trigger: GAGGGCAGAGCTGCTGCAAGAGCGGCTTAGGGGCCAGGAGCAGGCTCTGCGCTTTGAGCAGGAGAGGCAGAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
||
| CDS TCA 72 bp | CCGCCTGGGCTTCCCGGAGCTGCTGTTTCAACAGACTaGTCTCCGCGGTCTTCTGGCACACCTCCCATCGGG | + |
|
Preference number: 6 (lower is better) Translates to: PPGLPGAAVSTD*SPRSSGTPPIG Trigger: CCCGATGGGAGGTGTGCCAGAAGACCGCGGAGATCAGTCTGTTGAAACAGCAGCTCCGGGAAGCCCAGGCGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
||
| CDS GCA 72 bp | AGGAGGCTCCCGCAGCAGCCGCAGCTCGTGTTCAAGTaGCTGGTTGCGGCGGTACATGTCCATGTAGCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: RRLPQQPQLVFK*LVAAVHVHVAP Trigger: GGGAGCTACATGGACATGTACCGCCGCAACCAGGCACTTGAACACGAGCTGCGGCTGCTGCGGGAGCCTCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
||
| CDS CCA 72 bp | CCGAGGATGCTCCCGGTAGTAGAGGGTGGCATAGTCTaGCTCGTTCCGAGGGGCTCGCTTGGTGGTCTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: PRMLPVVEGGIV*LVPRGSLGGLA Trigger: GGCAAGACCACCAAGCGAGCCCCTCGGAACGAGCCAGACTATGCCACCCTCTACTACCGGGAGCATCCTCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001080.16 ENSMUST00000142721.2 ENSMUST00000156835.8 |
||
| CDS CCA 72 bp | AGTCACCAGCCCGAGGATGCTCCCGGTAGTAGAGGGTaGCATAGTCTGGCTCGTTCCGAGGGGCTCGCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: SHQPEDAPGSRG*HSLARSEGLAW Trigger: CCAAGCGAGCCCCTCGGAACGAGCCAGACTATGCCACCCTCTACTACCGGGAGCATCCTCGGGCTGGTGACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001080.16 ENSMUST00000142721.2 ENSMUST00000156835.8 |
||
| CDS CCA 72 bp | GGCCAGTACCTGGACTACGGCCAAAACTACCCCCGCTaGAAGAGTCCGACAGGCTGGGCTCAGGGCCACCTT | + |
|
Preference number: 6 (lower is better) Translates to: GQYLDYGQNYPR*KSPTGWAQGHL Trigger: AAGGTGGCCCTGAGCCCAGCCTGTCGGACTCTTCCAGCGGGGGTAGTTTTGGCCGTAGTCCAGGTACTGGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
||
| CDS CCA 72 bp | GGTCTTCTGGCACACCTCCCATCGGGCTTCTTCCTCTaGCCGAGCATTGGGGTCAGCCTCCATGGAGGACCC | + |
|
Preference number: 6 (lower is better) Translates to: GLLAHLPSGFFL*PSIGVSLHGGP Trigger: GGGTCCTCCATGGAGGCTGACCCCAATGCTCGGCCAGAGGAAGAAGCCCGATGGGAGGTGTGCCAGAAGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
||
| CDS CAA 90 bp | CCGGGAGCCAGCCAGTGCGGCCCGAAGTTCTTCAGGGGAAAAGTCTaGCCGTTCCAACAGGCTACCTACGCTGCCCATGGCAATGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: PGASQCGPKFFRGKV*PFQQATYAAHGNAS Trigger: GCTGGCATTGCCATGGGCAGCGTAGGTAGCCTGTTGGAACGGCAAGACTTTTCCCCTGAAGAACTTCGGGCCGCACTGGCTGGCTCCCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001080.16 ENSMUST00000142721.2 ENSMUST00000156835.8 |
||
| CDS CAA 90 bp | CTTGCGCAGGCGCCGCTGCTCCTGTTGAGCCATAAACAGCTGCAGTaGGAGGTTGCGCTCGCTGCGCTCAGCTTTCTGGGCCACCTCATG | + |
|
Preference number: 6 (lower is better) Translates to: LAQAPLLLLSHKQLQ*EVALAALSFLGHLM Trigger: CATGAGGTGGCCCAGAAAGCTGAGCGCAGCGAGCGCAACCTCCAACTGCAGCTGTTTATGGCTCAACAGGAGCAGCGGCGCCTGCGCAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
||
| CDS TCA 72 bp | GGGCTCCTTGGAGCACGGTCCAGGGAGCCTCCAAGGTaGTTAATGTGGCCCAAGGAGGAGCTGAAGGGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: GLLGARSREPPR*LMWPKEELKGL Trigger: CAGCCCCTTCAGCTCCTCCTTGGGCCACATTAATCACCTTGGAGGCTCCCTGGACCGTGCTCCAAGGAGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
||
| CDS CAA 72 bp | GCGCCGCTGCTCCTGTTGAGCCATAAACAGCTGCAGTaGGAGGTTGCGCTCGCTGCGCTCAGCTTTCTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: APLLLLSHKQLQ*EVALAALSFLG Trigger: GCCCAGAAAGCTGAGCGCAGCGAGCGCAACCTCCAACTGCAGCTGTTTATGGCTCAACAGGAGCAGCGGCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
||
| CDS GCA 72 bp | GCTGCCCCGAAGTTGCGTCTTCAAACTGAAGATCTCTaGCAGCTTCTGTGCCAGCTCCGCCTGGGCTTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: AAPKLRLQTEDL*QLLCQLRLGFP Trigger: CGGGAAGCCCAGGCGGAGCTGGCACAGAAGCTGGCAGAGATCTTCAGTTTGAAGACGCAACTTCGGGGCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
||
| CDS CCA 72 bp | CAGGACCGCCAGAGGTCCAGACTCCTTGGGGCTCCTTaGAGCACGGTCCAGGGAGCCTCCAAGGTGATTAAT | + |
|
Preference number: 6 (lower is better) Translates to: QDRQRSRLLGAP*STVQGASKVIN Trigger: ATTAATCACCTTGGAGGCTCCCTGGACCGTGCTCCAAGGAGCCCCAAGGAGTCTGGACCTCTGGCGGTCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
||
| CDS CAA 90 bp | GCCAGAGTGTGCAGGCTGCCGTTGCTTCGCCACAACTTCTGGCCCTaGTGGGCTGCCAGGCTTTGCATGGACAAGAAGCCTTTCCCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: ARVCRLPLLRHNFWP*WAARLCMDKKPFPE Trigger: CTCTGGGAAAGGCTTCTTGTCCATGCAAAGCCTGGCAGCCCACAAGGGCCAGAAGTTGTGGCGAAGCAACGGCAGCCTGCACACTCTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001080.16 ENSMUST00000156835.8 |
||
| CDS TCA 72 bp | TGTCAAAGCGACCCCGCTCAGGCAGGGAAGTCTTGCTaGAGTCACCAGCCCGAGGATGCTCCCGGTAGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: CQSDPAQAGKSC*SHQPEDAPGSR Trigger: TCTACTACCGGGAGCATCCTCGGGCTGGTGACTTCAGCAAGACTTCCCTGCCTGAGCGGGGTCGCTTTGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001080.16 ENSMUST00000142721.2 ENSMUST00000156835.8 |
||
| CDS TCA 72 bp | CTTGTGCCCGGCTGCCCCGAAGTTGCGTCTTCAAACTaGAGATCTCTGCCAGCTTCTGTGCCAGCTCCGCCT | + |
|
Preference number: 6 (lower is better) Translates to: LVPGCPEVASSN*RSLPASVPAPP Trigger: AGGCGGAGCTGGCACAGAAGCTGGCAGAGATCTTCAGTTTGAAGACGCAACTTCGGGGCAGCCGGGCACAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
||
| CDS GCA 72 bp | GCCAGTGCGGCCCGAAGTTCTTCAGGGGAAAAGTCTTaGCGTTCCAACAGGCTACCTACGCTGCCCATGGCA | + |
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Preference number: 6 (lower is better) Translates to: ASAARSSSGEKS*RSNRLPTLPMA Trigger: TGCCATGGGCAGCGTAGGTAGCCTGTTGGAACGGCAAGACTTTTCCCCTGAAGAACTTCGGGCCGCACTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001080.16 ENSMUST00000142721.2 ENSMUST00000156835.8 |
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| CDS GCA 72 bp | CGCCACAACTTCTGGCCCTTGTGGGCTGCCAGGCTTTaGATGGACAAGAAGCCTTTCCCAGAGCCCACAGGA | + |
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Preference number: 6 (lower is better) Translates to: RHNFWPLWAARL*MDKKPFPEPTG Trigger: TCCTGTGGGCTCTGGGAAAGGCTTCTTGTCCATGCAAAGCCTGGCAGCCCACAAGGGCCAGAAGTTGTGGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001080.16 ENSMUST00000156835.8 |
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| CDS GCA 72 bp | CCCGCAGCAGCCGCAGCTCGTGTTCAAGTGCCTGGTTaGGGCGGTACATGTCCATGTAGCTCCCTTGGATTT | + |
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Preference number: 6 (lower is better) Translates to: PAAAAARVQVPG*GGTCPCSSLGF Trigger: AAATCCAAGGGAGCTACATGGACATGTACCGCCGCAACCAGGCACTTGAACACGAGCTGCGGCTGCTGCGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| CDS CCA 72 bp | GGGTGGCATAGTCTGGCTCGTTCCGAGGGGCTCGCTTaGTGGTCTTGCCATCTTTCTTGGGGAGATGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: GWHSLARSEGLA*WSCHLSWGDAG Trigger: ACCTGCATCTCCCCAAGAAAGATGGCAAGACCACCAAGCGAGCCCCTCGGAACGAGCCAGACTATGCCACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001080.16 ENSMUST00000142721.2 ENSMUST00000156835.8 |
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| CDS CCA 72 bp | AGAGTGTGCAGGCTGCCGTTGCTTCGCCACAACTTCTaGCCCTTGTGGGCTGCCAGGCTTTGCATGGACAAG | + |
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Preference number: 6 (lower is better) Translates to: RVCRLPLLRHNF*PLWAARLCMDK Trigger: CTTGTCCATGCAAAGCCTGGCAGCCCACAAGGGCCAGAAGTTGTGGCGAAGCAACGGCAGCCTGCACACTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001080.16 ENSMUST00000156835.8 |
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| CDS CAA 72 bp | AGCCAGTGCGGCCCGAAGTTCTTCAGGGGAAAAGTCTaGCCGTTCCAACAGGCTACCTACGCTGCCCATGGC | + |
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Preference number: 6 (lower is better) Translates to: SQCGPKFFRGKV*PFQQATYAAHG Trigger: GCCATGGGCAGCGTAGGTAGCCTGTTGGAACGGCAAGACTTTTCCCCTGAAGAACTTCGGGCCGCACTGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001080.16 ENSMUST00000142721.2 ENSMUST00000156835.8 |
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| CDS CAA 72 bp | TCGCCACAACTTCTGGCCCTTGTGGGCTGCCAGGCTTaGCATGGACAAGAAGCCTTTCCCAGAGCCCACAGG | + |
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Preference number: 6 (lower is better) Translates to: SPQLLALVGCQA*HGQEAFPRAHR Trigger: CCTGTGGGCTCTGGGAAAGGCTTCTTGTCCATGCAAAGCCTGGCAGCCCACAAGGGCCAGAAGTTGTGGCGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001080.16 ENSMUST00000156835.8 |
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| CDS CAA 90 bp | GCCGTTGCTTCGCCACAACTTCTGGCCCTTGTGGGCTGCCAGGCTTaGCATGGACAAGAAGCCTTTCCCAGAGCCCACAGGAGGCTTGAA | + |
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Preference number: 6 (lower is better) Translates to: AVASPQLLALVGCQA*HGQEAFPRAHRRLE Trigger: TTCAAGCCTCCTGTGGGCTCTGGGAAAGGCTTCTTGTCCATGCAAAGCCTGGCAGCCCACAAGGGCCAGAAGTTGTGGCGAAGCAACGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001080.16 ENSMUST00000156835.8 |
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| CDS GCA 72 bp | GCCGTTGCTTCGCCACAACTTCTGGCCCTTGTGGGCTaGCAGGCTTTGCATGGACAAGAAGCCTTTCCCAGA | + |
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Preference number: 6 (lower is better) Translates to: AVASPQLLALVG*QALHGQEAFPR Trigger: TCTGGGAAAGGCTTCTTGTCCATGCAAAGCCTGGCAGCCCACAAGGGCCAGAAGTTGTGGCGAAGCAACGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001080.16 ENSMUST00000156835.8 |
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| CDS CCA 72 bp | ACAACTTCTGGCCCTTGTGGGCTGCCAGGCTTTGCATaGACAAGAAGCCTTTCCCAGAGCCCACAGGAGGCT | + |
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Preference number: 6 (lower is better) Translates to: TTSGPCGLPGFA*TRSLSQSPQEA Trigger: AGCCTCCTGTGGGCTCTGGGAAAGGCTTCTTGTCCATGCAAAGCCTGGCAGCCCACAAGGGCCAGAAGTTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001080.16 ENSMUST00000156835.8 |
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| CDS CCA 72 bp | AGGCTGCCGTTGCTTCGCCACAACTTCTGGCCCTTGTaGGCTGCCAGGCTTTGCATGGACAAGAAGCCTTTC | + |
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Preference number: 6 (lower is better) Translates to: RLPLLRHNFWPL*AARLCMDKKPF Trigger: GAAAGGCTTCTTGTCCATGCAAAGCCTGGCAGCCCACAAGGGCCAGAAGTTGTGGCGAAGCAACGGCAGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001080.16 ENSMUST00000156835.8 |
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| CDS CAA 72 bp | AAGGAGTTAGAAACATCCTGGTCACCGAGGTCCCTCTaGAGCTCTTCACGGGCCTCAGGCAACACGGCGACC | + |
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Preference number: 6 (lower is better) Translates to: KELETSWSPRSL*SSSRASGNTAT Trigger: GGTCGCCGTGTTGCCTGAGGCCCGTGAAGAGCTCAAGAGGGACCTCGGTGACCAGGATGTTTCTAACTCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| CDS CAA 72 bp | TGCCTGGTTGCGGCGGTACATGTCCATGTAGCTCCCTaGGATTTCTCGCTGGTAGCGCAGCACCCTCTCCTT | + |
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Preference number: 6 (lower is better) Translates to: CLVAAVHVHVAP*DFSLVAQHPLL Trigger: AAGGAGAGGGTGCTGCGCTACCAGCGAGAAATCCAAGGGAGCTACATGGACATGTACCGCCGCAACCAGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| CDS CAA 90 bp | AGGCTTTGCATGGACAAGAAGCCTTTCCCAGAGCCCACAGGAGGCTaGAACACAGAAGGACGGATTCGGCACTTGTCAAAGCGACCCCGC | + |
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Preference number: 6 (lower is better) Translates to: RLCMDKKPFPEPTGG*NTEGRIRHLSKRPR Trigger: GCGGGGTCGCTTTGACAAGTGCCGAATCCGTCCTTCTGTGTTCAAGCCTCCTGTGGGCTCTGGGAAAGGCTTCTTGTCCATGCAAAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001080.16 ENSMUST00000156835.8 |
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| CDS CAA 90 bp | GTGTTCAAGTGCCTGGTTGCGGCGGTACATGTCCATGTAGCTCCCTaGGATTTCTCGCTGGTAGCGCAGCACCCTCTCCTTTTCCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: VFKCLVAAVHVHVAP*DFSLVAQHPLLFLL Trigger: CAGGAGGAAAAGGAGAGGGTGCTGCGCTACCAGCGAGAAATCCAAGGGAGCTACATGGACATGTACCGCCGCAACCAGGCACTTGAACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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| CDS CAA 72 bp | ACAGGAGGCTTGAACACAGAAGGACGGATTCGGCACTaGTCAAAGCGACCCCGCTCAGGCAGGGAAGTCTTG | + |
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Preference number: 6 (lower is better) Translates to: TGGLNTEGRIRH*SKRPRSGREVL Trigger: CAAGACTTCCCTGCCTGAGCGGGGTCGCTTTGACAAGTGCCGAATCCGTCCTTCTGTGTTCAAGCCTCCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001080.16 ENSMUST00000142721.2 ENSMUST00000156835.8 |
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| CDS TCA 72 bp | TGGTCTTGCCATCTTTCTTGGGGAGATGCAGGTAGCTaGAGAACTCTCGTTGGCCCAAGCCTTTCCGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: WSCHLSWGDAGS*RTLVGPSLSGG Trigger: TCCTCCGGAAAGGCTTGGGCCAACGAGAGTTCTTCAGCTACCTGCATCTCCCCAAGAAAGATGGCAAGACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001080.16 ENSMUST00000142721.2 ENSMUST00000156835.8 |
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| CDS TCA 72 bp | TCAGACAACCACAACCGCTGGCGCTCCTCTAGCACCTaGGTAAAGGAGTTAGAAACATCCTGGTCACCGAGG | + |
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Preference number: 6 (lower is better) Translates to: SDNHNRWRSSST*VKELETSWSPR Trigger: CCTCGGTGACCAGGATGTTTCTAACTCCTTTACTCAGGTGCTAGAGGAGCGCCAGCGGTTGTGGTTGTCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001080.16 |
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