Pregenerated sensors for N4BP2L2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029655Ensembl transcript IDs: ENSMUST00000118316.8, ENSMUST00000156180.2
Found 136 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACCTGCCTGCCTCTCCCTGTTGGTGCTGTTGGTGGATTAAAGGCGTaGATCACCGTGCCTAGGATGTCAATATTATTCTGTAACAACAGC | + |
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Preference number: 1 (lower is better) Translates to: TCLPLPVGAVGGLKA*ITVPRMSILFCNNS Trigger: GCTGTTGTTACAGAATAATATTGACATCCTAGGCACGGTGATGCACGCCTTTAATCCACCAACAGCACCAACAGGGAGAGGCAGGCAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
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| 3UTR CCA 90 bp | TTCAAGGGAAAATGGTGGTGGCATGCCTCCTATAATCTCAGCACTTaGGAGATGGCAGCAGGGAGGATCAGGACTTCTCAGCTATTCAGT | + |
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Preference number: 1 (lower is better) Translates to: FKGKWWWHASYNLST*EMAAGRIRTSQLFS Trigger: ACTGAATAGCTGAGAAGTCCTGATCCTCCCTGCTGCCATCTCCCAAGTGCTGAGATTATAGGAGGCATGCCACCACCATTTTCCCTTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
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| 3UTR TCA 90 bp | TTGTATCAAAATTGTACTAACCCACAGGGTCAAGAGAATAAGTGCTaGCCTGCAGCCACGGGTGAAGCTCACGCAGACACTGGAATCAGT | + |
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Preference number: 1 (lower is better) Translates to: LYQNCTNPQGQENKC*PAATGEAHADTGIS Trigger: ACTGATTCCAGTGTCTGCGTGAGCTTCACCCGTGGCTGCAGGTCAGCACTTATTCTCTTGACCCTGTGGGTTAGTACAATTTTGATACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
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| 3UTR TCA 90 bp | TGGAAGACACAGACAGATAGATCTCTGAGTTTGAGGGTAGCCTGGTaGATTCAGGATAGTCAGGGCTACACAGAGAAAACAGACCATACC | + |
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Preference number: 1 (lower is better) Translates to: WKTQTDRSLSLRVAW*IQDSQGYTEKTDHT Trigger: GGTATGGTCTGTTTTCTCTGTGTAGCCCTGACTATCCTGAATTCACCAGGCTACCCTCAAACTCAGAGATCTATCTGTCTGTGTCTTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
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| 3UTR TCA 90 bp | GATGATAAAATACGTACAAACACACATGTGCTAAACAAGATAAGATaGCACGAGTTGGGATCTACTCACAGAGGAACAGCACAAAGCATT | + |
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Preference number: 1 (lower is better) Translates to: DDKIRTNTHVLNKIR*HELGSTHRGTAQSI Trigger: AATGCTTTGTGCTGTTCCTCTGTGAGTAGATCCCAACTCGTGTCATCTTATCTTGTTTAGCACATGTGTGTTTGTACGTATTTTATCATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
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| 3UTR TCA 90 bp | TCTGGAAGAGCACTTACTCTTAACCACCGAGCCATGTCTCAATTCTaGATAAAGTTTCTTAAAGACACAGCATATCTTAACAGTCAAGCT | + |
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Preference number: 1 (lower is better) Translates to: SGRALTLNHRAMSQF*IKFLKDTAYLNSQA Trigger: AGCTTGACTGTTAAGATATGCTGTGTCTTTAAGAAACTTTATTCAGAATTGAGACATGGCTCGGTGGTTAAGAGTAAGTGCTCTTCCAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
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| 3UTR TCA 90 bp | ATGAACTCTACTGAATGTAAAGTCAAGTTTAACCACAAATACAATTaGGAGGCAAACAACTCAGGAGCTTCTTTCTCAGTCTTCCCATTA | + |
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Preference number: 1 (lower is better) Translates to: MNSTECKVKFNHKYN*EANNSGASFSVFPL Trigger: TAATGGGAAGACTGAGAAAGAAGCTCCTGAGTTGTTTGCCTCTCAATTGTATTTGTGGTTAAACTTGACTTTACATTCAGTAGAGTTCAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
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| 3UTR-3UTR CCA 90 bp | CACGCCTTTAATCCCAGCACTCCGGAGGCAGGGGCAGGCAGATTTCTGAGTTTGATCCCAGCACCCACCTaGCAGCTTATAACCATCTGT | + |
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Preference number: 2 (lower is better) Translates to: HAFNPSTPEAGAGRFLSLIPAPT*QLITIC Trigger: ACAGATGGTTATAAGCTGCCAGGTGGGTGCTGGGAT...CAAACTCAGAAATCTGCCTGCCCCTGCCTCCGGAGTGCTGGGATTAAAGGCGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
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| 3UTR-3UTR GCA 90 bp | AAGTCAAGACAGGCTCACTACTTTGTTCTCAAAAGTAATCAATACGTCAGCCAAGAGCCTCCCCACCTCTaGTCCCCCTCGAGAGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: KSRQAHYFVLKSNQYVSQEPPHL*SPSRGR Trigger: CCTTCCTCTCGAGGGGGAGCAGAGGTGGGGAGGCTC...TTGGCTGACGTATTGATTACTTTTGAGAACAAAGTAGTGAGCCTGTCTTGACTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000156180.2 |
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| 3UTR-3UTR TCA 90 bp | CACGCCTTTAATCCCAGCACTCCGGAGGCAGGGGCAGGCAGATTTCTGAGTTTGTTCAGCCTCATGACTTaGAAAGAAACTCAGCAAAAT | + |
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Preference number: 2 (lower is better) Translates to: HAFNPSTPEAGAGRFLSLFSLMT*KETQQN Trigger: ATTTTGCTGAGTTTCTTTTCAAGTCATGAGGCTGAA...CAAACTCAGAAATCTGCCTGCCCCTGCCTCCGGAGTGCTGGGATTAAAGGCGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
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| 3UTR-3UTR GCA 90 bp | ACTATCACCTTCAACACACAGTCTGAAAAGTCTTCAGTTCCCACCAGACAGGGTTCAAAGATACCTGCCTaGCTCTCCCTGTTGGTGCTG | + |
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Preference number: 2 (lower is better) Translates to: TITFNTQSEKSSVPTRQGSKIPA*LSLLVL Trigger: CAGCACCAACAGGGAGAGGCAGGCAGGTATCTTTGA...ACCCTGTCTGGTGGGAACTGAAGACTTTTCAGACTGTGTGTTGAAGGTGATAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
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| 3UTR-3UTR GCA 90 bp | GGTCTGCTGCCACAGCACTGGAGGAGGCTTAACTCTCTAACAGTGAACTATGTAGACATCCTAGGTTACTaGATGCATGGTGGACACACA | + |
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Preference number: 2 (lower is better) Translates to: GLLPQHWRRLNSLTVNYVDILGY*MHGGHT Trigger: TGTGTGTCCACCATGCATGCAGTAACCTAGGATGTC...TACATAGTTCACTGTTAGAGAGTTAAGCCTCCTCCAGTGCTGTGGCAGCAGACC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
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| 3UTR-3UTR CCA 90 bp | CACGCCTTTAATCCCAGCACTCCGGAGGCAGGGGCAGGCAGATTTCTGAGTTTGAGATTAAGCTGGGCATaGTGGTTGTATACCTTTAAT | + |
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Preference number: 2 (lower is better) Translates to: HAFNPSTPEAGAGRFLSLRLSWA*WLYTFN Trigger: ATTAAAGGTATACAACCACCATGCCCAGCTTAATCT...CAAACTCAGAAATCTGCCTGCCCCTGCCTCCGGAGTGCTGGGATTAAAGGCGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
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| 3UTR-3UTR TCA 90 bp | GGTCTGCTGCCACAGCACTGGAGGAGGCTTAACTCTCTAACAGTGAACTATGTACTCTTTAGGATCAGATaGGGCAAGCTCTGTTTGAAG | + |
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Preference number: 2 (lower is better) Translates to: GLLPQHWRRLNSLTVNYVLFRIR*GKLCLK Trigger: CTTCAAACAGAGCTTGCCTCATCTGATCCTAAAGAG...TACATAGTTCACTGTTAGAGAGTTAAGCCTCCTCCAGTGCTGTGGCAGCAGACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
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| 3UTR-3UTR TCA 90 bp | ACTATCACCTTCAACACACAGTCTGAAAAGTCTTCAGTTCCCACCAGACAGGGTCTCATGTGCTCCCCCTaGAAAGGAAAGAGTCTTCAT | + |
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Preference number: 2 (lower is better) Translates to: TITFNTQSEKSSVPTRQGLMCSP*KGKSLH Trigger: ATGAAGACTCTTTCCTTTTCAGGGGGAGCACATGAG...ACCCTGTCTGGTGGGAACTGAAGACTTTTCAGACTGTGTGTTGAAGGTGATAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
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| 3UTR-3UTR TCA 90 bp | ACTATCACCTTCAACACACAGTCTGAAAAGTCTTCAGTTCCCACCAGACAGGGTGAAATAACTCAGTGGTaGAGAGGACCAGGTCCAGAT | + |
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Preference number: 2 (lower is better) Translates to: TITFNTQSEKSSVPTRQGEITQW*RGPGPD Trigger: ATCTGGACCTGGTCCTCTTCACCACTGAGTTATTTC...ACCCTGTCTGGTGGGAACTGAAGACTTTTCAGACTGTGTGTTGAAGGTGATAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
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| 3UTR-3UTR GCA 90 bp | ATCAAAATTGTACTAACCCACAGGGTCAAGAGAATAAGTGCTGACCTGCAGCCATTACAAGGGGTCATGTaGCACCTCATATGGGTGCTG | + |
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Preference number: 2 (lower is better) Translates to: IKIVLTHRVKRISADLQPLQGVM*HLIWVL Trigger: CAGCACCCATATGAGGTGGCACATGACCCCTTGTAA...TGGCTGCAGGTCAGCACTTATTCTCTTGACCCTGTGGGTTAGTACAATTTTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
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| 3UTR-3UTR GCA 90 bp | GGTCTGCTGCCACAGCACTGGAGGAGGCTTAACTCTCTAACAGTGAACTATGTACCAACAGGTACATTTTaGATTGGCTTTTTAGCATCC | + |
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Preference number: 2 (lower is better) Translates to: GLLPQHWRRLNSLTVNYVPTGTF*IGFLAS Trigger: GGATGCTAAAAAGCCAATGCAAAATGTACCTGTTGG...TACATAGTTCACTGTTAGAGAGTTAAGCCTCCTCCAGTGCTGTGGCAGCAGACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
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| 3UTR-3UTR GCA 90 bp | ATCACCTTCAACACACAGTCTGAAAAGTCTTCAGTTCCCACCAGACAGGGTAATATGAATGACAGCGACTaGACAGGCACACACATGCAT | + |
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Preference number: 2 (lower is better) Translates to: ITFNTQSEKSSVPTRQGNMNDSD*TGTHMH Trigger: ATGCATGTGTGTGCCTGTGCAGTCGCTGTCATTCAT...ATTACCCTGTCTGGTGGGAACTGAAGACTTTTCAGACTGTGTGTTGAAGGTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
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| 3UTR-3UTR CCA 90 bp | ATCAAAATTGTACTAACCCACAGGGTCAAGAGAATAAGTGCTGACCTGCAGCCAGGAAGCAGATGCAGGTaGATTTCTCTGAGTTTGAGG | + |
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Preference number: 2 (lower is better) Translates to: IKIVLTHRVKRISADLQPGSRCR*ISLSLR Trigger: CCTCAAACTCAGAGAAATCCACCTGCATCTGCTTCC...TGGCTGCAGGTCAGCACTTATTCTCTTGACCCTGTGGGTTAGTACAATTTTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
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| 3UTR-3UTR CCA 90 bp | ACTATCACCTTCAACACACAGTCTGAAAAGTCTTCAGTTCCCACCAGACAGGGTCTGTCTAACACTTGCTaGGAAATTCTGTGTGAACTA | + |
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Preference number: 2 (lower is better) Translates to: TITFNTQSEKSSVPTRQGLSNTC*EILCEL Trigger: TAGTTCACACAGAATTTCCCAGCAAGTGTTAGACAG...ACCCTGTCTGGTGGGAACTGAAGACTTTTCAGACTGTGTGTTGAAGGTGATAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
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| 3UTR-3UTR TCA 90 bp | ACTATCACCTTCAACACACAGTCTGAAAAGTCTTCAGTTCCCACCAGACAGGGTTTGCAATACAACACCTaGAATGTGACAGTGTTACTA | + |
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Preference number: 2 (lower is better) Translates to: TITFNTQSEKSSVPTRQGLQYNT*NVTVLL Trigger: TAGTAACACTGTCACATTTCAGGTGTTGTATTGCAA...ACCCTGTCTGGTGGGAACTGAAGACTTTTCAGACTGTGTGTTGAAGGTGATAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
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| 3UTR-3UTR GCA 90 bp | ACTATCACCTTCAACACACAGTCTGAAAAGTCTTCAGTTCCCACCAGACAGGGTTTAAAAATACAGACTTaGCTTGTCTCTGTTGCCCTT | + |
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Preference number: 2 (lower is better) Translates to: TITFNTQSEKSSVPTRQGLKIQT*LVSVAL Trigger: AAGGGCAACAGAGACAAGGCAAGTCTGTATTTTTAA...ACCCTGTCTGGTGGGAACTGAAGACTTTTCAGACTGTGTGTTGAAGGTGATAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
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| 3UTR-3UTR CCA 90 bp | ATTTGTGGCATAACACCCTCTTTTTCCTGTATAAAGCCTGAAAGTGATGTGTTACCCTGTTGGTGCTGTTaGTGGATTAAAGGCGTGCAT | + |
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Preference number: 2 (lower is better) Translates to: ICGITPSFSCIKPESDVLPCWCC*WIKGVH Trigger: ATGCACGCCTTTAATCCACCAACAGCACCAACAGGG...TAACACATCACTTTCAGGCTTTATACAGGAAAAAGAGGGTGTTATGCCACAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
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| 3UTR-3UTR TCA 90 bp | ATCAAAATTGTACTAACCCACAGGGTCAAGAGAATAAGTGCTGACCTGCAGCCAACCCAAGGTTTCCTCTaGAATTTACAAAGCACAAAA | + |
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Preference number: 2 (lower is better) Translates to: IKIVLTHRVKRISADLQPTQGFL*NLQSTK Trigger: TTTTGTGCTTTGTAAATTTCAGAGGAAACCTTGGGT...TGGCTGCAGGTCAGCACTTATTCTCTTGACCCTGTGGGTTAGTACAATTTTGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
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| 3UTR-3UTR CCA 90 bp | ATTTGTGGCATAACACCCTCTTTTTCCTGTATAAAGCCTGAAAGTGATGTGTTAAGGTTACTGCATGCATaGTGGACACACACACACACA | + |
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Preference number: 2 (lower is better) Translates to: ICGITPSFSCIKPESDVLRLLHA*WTHTHT Trigger: TGTGTGTGTGTGTGTCCACCATGCATGCAGTAACCT...TAACACATCACTTTCAGGCTTTATACAGGAAAAAGAGGGTGTTATGCCACAAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
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| 3UTR-3UTR CCA 90 bp | ATCAAAATTGTACTAACCCACAGGGTCAAGAGAATAAGTGCTGACCTGCAGCCAACTAGGAGTTATTTGTaGCATAACACCCTCTTTTTC | + |
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Preference number: 2 (lower is better) Translates to: IKIVLTHRVKRISADLQPTRSYL*HNTLFF Trigger: GAAAAAGAGGGTGTTATGCCACAAATAACTCCTAGT...TGGCTGCAGGTCAGCACTTATTCTCTTGACCCTGTGGGTTAGTACAATTTTGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
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| 3UTR-3UTR TCA 90 bp | ATTTGTGGCATAACACCCTCTTTTTCCTGTATAAAGCCTGAAAGTGATGTGTTATCCAATGCCTTCTTCTaGCATCCTAGGTTACTGCAT | + |
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Preference number: 2 (lower is better) Translates to: ICGITPSFSCIKPESDVLSNAFF*HPRLLH Trigger: ATGCAGTAACCTAGGATGTCAGAAGAAGGCATTGGA...TAACACATCACTTTCAGGCTTTATACAGGAAAAAGAGGGTGTTATGCCACAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
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| 3UTR-3UTR GCA 90 bp | CTCAAAAGTAATCAATACGTCAGCCAAAACAGCCAACTTAATAGTCATCTGCGAGAAGGGGTCTTTGTATaGTTTTCTGTGTTGGTTCCA | + |
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Preference number: 2 (lower is better) Translates to: LKSNQYVSQNSQLNSHLREGVFV*FSVLVP Trigger: TGGAACCAACACAGAAAAGCATACAAAGACCCCTTC...TCGCAGATGACTATTAAGTTGGCTGTTTTGGCTGACGTATTGATTACTTTTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000156180.2 |
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| 3UTR CAA 90 bp | ACAACTTGTAGGAAACACCTTGTGAGGCAGCAAAGTGGTTTTTATTaGAAACTACTCAAAAGTCAAGACAGGCTCACTACTTTGTTCTCA | + |
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Preference number: 2 (lower is better) Translates to: TTCRKHLVRQQSGFY*KLLKSQDRLTTLFS Trigger: TGAGAACAAAGTAGTGAGCCTGTCTTGACTTTTGAGTAGTTTCAAATAAAAACCACTTTGCTGCCTCACAAGGTGTTTCCTACAAGTTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
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| 3UTR-3UTR GCA 90 bp | CAGTGTAACAAAGGTATTCTAGTAAGAGGTGGTAGAGTTTCTTTCCAGTACTACCTACTGTCTAACACTTaGTGGGAAATTCTGTGTGAA | + |
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Preference number: 2 (lower is better) Translates to: QCNKGILVRGGRVSFQYYLLSNT*WEILCE Trigger: TTCACACAGAATTTCCCAGCAAGTGTTAGACAGTAG...GTAGTACTGGAAAGAAACTCTACCACCTCTTACTAGAATACCTTTGTTACACTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
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| 3UTR-3UTR TCA 90 bp | ATTTGTGGCATAACACCCTCTTTTTCCTGTATAAAGCCTGAAAGTGATGTGTTATACTTTTCAGCCTCATaGCTTGAAAAGAAACTCAGC | + |
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Preference number: 2 (lower is better) Translates to: ICGITPSFSCIKPESDVLYFSAS*LEKKLS Trigger: GCTGAGTTTCTTTTCAAGTCATGAGGCTGAAAAGTA...TAACACATCACTTTCAGGCTTTATACAGGAAAAAGAGGGTGTTATGCCACAAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
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| 3UTR-3UTR GCA 90 bp | ATTTGTGGCATAACACCCTCTTTTTCCTGTATAAAGCCTGAAAGTGATGTGTTACACAGGAACAACATATaGATAAAACAAAGCCATGAC | + |
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Preference number: 2 (lower is better) Translates to: ICGITPSFSCIKPESDVLHRNNI*IKQSHD Trigger: GTCATGGCTTTGTTTTATGCATATGTTGTTCCTGTG...TAACACATCACTTTCAGGCTTTATACAGGAAAAAGAGGGTGTTATGCCACAAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
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| 3UTR-3UTR CCA 90 bp | AAGTCAAGACAGGCTCACTACTTTGTTCTCAAAAGTAATCAATACGTCAGCCAATGTGAGGCAGCAAAGTaGTTTTTATTTGAAACTACT | + |
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Preference number: 2 (lower is better) Translates to: KSRQAHYFVLKSNQYVSQCEAAK*FLFETT Trigger: AGTAGTTTCAAATAAAAACCACTTTGCTGCCTCACA...TTGGCTGACGTATTGATTACTTTTGAGAACAAAGTAGTGAGCCTGTCTTGACTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000118316.8 ENSMUST00000156180.2 |
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| 3UTR-3UTR CCA 90 bp | AAGTCAAGTTTAACCACAAATACAATTGAGAGGCAAACAACTCAGGAGCTTCTTAAGCCAATTGTGGATTaGTTATATGAAGCCATGCTT | + |
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Preference number: 2 (lower is better) Translates to: KSSLTTNTIERQTTQELLKPIVD*LYEAML Trigger: AAGCATGGCTTCATATAACCAATCCACAATTGGCTT...AAGAAGCTCCTGAGTTGTTTGCCTCTCAATTGTATTTGTGGTTAAACTTGACTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
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| 3UTR-3UTR CCA 90 bp | ATTTGTGGCATAACACCCTCTTTTTCCTGTATAAAGCCTGAAAGTGATGTGTTATGTGAGGCAGCAAAGTaGTTTTTATTTGAAACTACT | + |
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Preference number: 2 (lower is better) Translates to: ICGITPSFSCIKPESDVLCEAAK*FLFETT Trigger: AGTAGTTTCAAATAAAAACCACTTTGCTGCCTCACA...TAACACATCACTTTCAGGCTTTATACAGGAAAAAGAGGGTGTTATGCCACAAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
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| 3UTR TCA 72 bp | GAGTTTGATCCCAGACCCTCACTCATGACCTCCACATaGATGACAGCGACTGCACAGGCACACACATGCATG | + |
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Preference number: 3 (lower is better) Translates to: EFDPRPSLMTST*MTATAQAHTCM Trigger: CATGCATGTGTGTGCCTGTGCAGTCGCTGTCATTCATGTGGAGGTCATGAGTGAGGGTCTGGGATCAAACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
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| 3UTR CCA 72 bp | GGTGGCATGCCTCCTATAATCTCAGCACTTGGGAGATaGCAGCAGGGAGGATCAGGACTTCTCAGCTATTCA | + |
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Preference number: 3 (lower is better) Translates to: GGMPPIISALGR*QQGGSGLLSYS Trigger: TGAATAGCTGAGAAGTCCTGATCCTCCCTGCTGCCATCTCCCAAGTGCTGAGATTATAGGAGGCATGCCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
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| 3UTR CCA 72 bp | AAATGGTGGTGGCATGCCTCCTATAATCTCAGCACTTaGGAGATGGCAGCAGGGAGGATCAGGACTTCTCAG | + |
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Preference number: 3 (lower is better) Translates to: KWWWHASYNLST*EMAAGRIRTSQ Trigger: CTGAGAAGTCCTGATCCTCCCTGCTGCCATCTCCCAAGTGCTGAGATTATAGGAGGCATGCCACCACCATTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
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| 3UTR TCA 72 bp | AATTGTACTAACCCACAGGGTCAAGAGAATAAGTGCTaGCCTGCAGCCACGGGTGAAGCTCACGCAGACACT | + |
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Preference number: 3 (lower is better) Translates to: NCTNPQGQENKC*PAATGEAHADT Trigger: AGTGTCTGCGTGAGCTTCACCCGTGGCTGCAGGTCAGCACTTATTCTCTTGACCCTGTGGGTTAGTACAATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
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| 3UTR TCA 72 bp | GTAACTCTGGCTCTAGGGGAATCCAATGCCTTCTTCTaGCATCCTAGGTTACTGCATGCATGGTGGACACAC | + |
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Preference number: 3 (lower is better) Translates to: VTLALGESNAFF*HPRLLHAWWTH Trigger: GTGTGTCCACCATGCATGCAGTAACCTAGGATGTCAGAAGAAGGCATTGGATTCCCCTAGAGCCAGAGTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
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| 3UTR GCA 72 bp | TGGATTCCACAATACCTGGAGTTACAAGGGGTCATGTaGCACCTCATATGGGTGCTGGGAATCAAACTCTGG | + |
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Preference number: 3 (lower is better) Translates to: WIPQYLELQGVM*HLIWVLGIKLW Trigger: CCAGAGTTTGATTCCCAGCACCCATATGAGGTGGCACATGACCCCTTGTAACTCCAGGTATTGTGGAATCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
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| 3UTR GCA 72 bp | CATGTTGGCCAATCTAGCCTTGAACTCAAAGATACCTaGCTGCCTCTCCCTGTTGGTGCTGTTGGTGGATTA | + |
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Preference number: 3 (lower is better) Translates to: HVGQSSLELKDT*LPLPVGAVGGL Trigger: TAATCCACCAACAGCACCAACAGGGAGAGGCAGGCAGGTATCTTTGAGTTCAAGGCTAGATTGGCCAACATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
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| 3UTR CCA 72 bp | TACCTGGAGTTACAAGGGGTCATGTGCCACCTCATATaGGTGCTGGGAATCAAACTCTGGAAGAGCACTTAC | + |
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Preference number: 3 (lower is better) Translates to: YLELQGVMCHLI*VLGIKLWKSTY Trigger: GTAAGTGCTCTTCCAGAGTTTGATTCCCAGCACCCATATGAGGTGGCACATGACCCCTTGTAACTCCAGGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
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| 3UTR-3UTR CAA 90 bp | ATCAAAATTGTACTAACCCACAGGGTCAAGAGAATAAGTGCTGACCTGCAGCCAAACACTAGGAGTTATTaGTGGCATAACACCCTCTTT | + |
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Preference number: 3 (lower is better) Translates to: IKIVLTHRVKRISADLQPNTRSY*WHNTLF Trigger: AAAGAGGGTGTTATGCCACAAATAACTCCTAGTGTT...TGGCTGCAGGTCAGCACTTATTCTCTTGACCCTGTGGGTTAGTACAATTTTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
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| 3UTR-3UTR CAA 90 bp | AATACGTCAGCCAAAACAGCCAACTTAATAGTCATCTGCGATAGATACTTGACTGAGAGGAAGGGGTCTTaGTATGCTTTTCTGTGTTGG | + |
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Preference number: 3 (lower is better) Translates to: NTSAKTANLIVICDRYLTERKGS*YAFLCW Trigger: CCAACACAGAAAAGCATACAAAGACCCCTTCCTCTC...AGTCAAGTATCTATCGCAGATGACTATTAAGTTGGCTGTTTTGGCTGACGTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000156180.2 |
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| 3UTR GCA 72 bp | AGGCTGGCCTCAAACTCAGAGATCTGTCTGCTTCTCTaGTTCCTGAATCGAATGATATTATTCAGAAATACA | + |
|
Preference number: 3 (lower is better) Translates to: RLASNSEICLLL*FLNRMILFRNT Trigger: TGTATTTCTGAATAATATCATTCGATTCAGGAAGCAGAGAAGCAGACAGATCTCTGAGTTTGAGGCCAGCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
||
| 3UTR-3UTR CAA 90 bp | ATTTGTGGCATAACACCCTCTTTTTCCTGTATAAAGCCTGAAAGTGATGTGTTATTGGCCAATCTAGCCTaGAACTCAAAGATACCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: ICGITPSFSCIKPESDVLLANLA*NSKIPA Trigger: GGCAGGTATCTTTGAGTTCAAGGCTAGATTGGCCAA...TAACACATCACTTTCAGGCTTTATACAGGAAAAAGAGGGTGTTATGCCACAAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
||
| 3UTR GCA 72 bp | CATGGTGGACACACACACACACACAGGAACAACATATaGATAAAACAAAGCCATGACAATTTGAATCAACTA | + |
|
Preference number: 3 (lower is better) Translates to: HGGHTHTHRNNI*IKQSHDNLNQL Trigger: TAGTTGATTCAAATTGTCATGGCTTTGTTTTATGCATATGTTGTTCCTGTGTGTGTGTGTGTGTCCACCATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
||
| 3UTR-3UTR CAA 90 bp | ATTTGTGGCATAACACCCTCTTTTTCCTGTATAAAGCCTGAAAGTGATGTGTTATTTAAAAATACAGACTaGCCTTGTCTCTGTTGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: ICGITPSFSCIKPESDVLFKNTD*PCLCCP Trigger: AGGGCAACAGAGACAAGGCAAGTCTGTATTTTTAAA...TAACACATCACTTTCAGGCTTTATACAGGAAAAAGAGGGTGTTATGCCACAAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
||
| 3UTR TCA 72 bp | GCACTTACTCTTAACCACCGAGCCATGTCTCAATTCTaGATAAAGTTTCTTAAAGACACAGCATATCTTAAC | + |
|
Preference number: 3 (lower is better) Translates to: ALTLNHRAMSQF*IKFLKDTAYLN Trigger: GTTAAGATATGCTGTGTCTTTAAGAAACTTTATTCAGAATTGAGACATGGCTCGGTGGTTAAGAGTAAGTGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
||
| 3UTR TCA 72 bp | ACTGAATGTAAAGTCAAGTTTAACCACAAATACAATTaGGAGGCAAACAACTCAGGAGCTTCTTTCTCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: TECKVKFNHKYN*EANNSGASFSV Trigger: GACTGAGAAAGAAGCTCCTGAGTTGTTTGCCTCTCAATTGTATTTGTGGTTAAACTTGACTTTACATTCAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
||
| CDS-3UTR GCA 90 bp | ATCACCTTCAACACACAGTCTGAAAAGTCTTCAGTTCCCACCAGACAGGGTAATGAGCCTCCCCACCTCTaGTCCCCCTCGAGAGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: ITFNTQSEKSSVPTRQGNEPPHL*SPSRGR Trigger: CCTTCCTCTCGAGGGGGAGCAGAGGTGGGGAGGCTC...ATTACCCTGTCTGGTGGGAACTGAAGACTTTTCAGACTGTGTGTTGAAGGTGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
||
| 3UTR CAA 72 bp | CAATTGGGAAGCAGATGCAGGTGGATTTCTCTGAGTTaGAGGCTAGCCTGGTCTACAGAGATGAGTTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QLGSRCRWISLS*RLAWSTEMSSR Trigger: CCTGGAACTCATCTCTGTAGACCAGGCTAGCCTCAAACTCAGAGAAATCCACCTGCATCTGCTTCCCAATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
||
| 3UTR CAA 72 bp | GTTTCACTGGAATTTGGCATGTTGGCCAATCTAGCCTaGAACTCAAAGATACCTGCCTGCCTCTCCCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VSLEFGMLANLA*NSKIPACLSLL Trigger: CAACAGGGAGAGGCAGGCAGGTATCTTTGAGTTCAAGGCTAGATTGGCCAACATGCCAAATTCCAGTGAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
||
| CDS-3UTR TCA 90 bp | GGTCTGCTGCCACAGCACTGGAGGAGGCTTAACTCTCTAACAGTGAACTATGTATGTAAATGGGGCCTATaGATGCTTTACTTGTGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: GLLPQHWRRLNSLTVNYVCKWGL*MLYLCY Trigger: ATAGCACAAGTAAAGCATTCATAGGCCCCATTTACA...TACATAGTTCACTGTTAGAGAGTTAAGCCTCCTCCAGTGCTGTGGCAGCAGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
||
| CDS-3UTR TCA 90 bp | GGTCTGCTGCCACAGCACTGGAGGAGGCTTAACTCTCTAACAGTGAACTATGTAACTGAAGAACATCACTaGGATCTTTGTTTTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GLLPQHWRRLNSLTVNYVTEEHH*DLCFPP Trigger: AGGAGGAAAACAAAGATCTCAGTGATGTTCTTCAGT...TACATAGTTCACTGTTAGAGAGTTAAGCCTCCTCCAGTGCTGTGGCAGCAGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
||
| CDS-3UTR TCA 90 bp | GGGCATGGTGGTTGTATACCTTTAATCCCAGTACTTGGAAGACACAGACAGATAGAGGATCATGGGGTATaGCAAAAGGATGCATGGACT | + |
|
Preference number: 4 (lower is better) Translates to: GHGGCIPLIPVLGRHRQIEDHGV*QKDAWT Trigger: AGTCCATGCATCCTTTTGTCATACCCCATGATCCTC...TATCTGTCTGTGTCTTCCAAGTACTGGGATTAAAGGTATACAACCACCATGCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
||
| CDS-3UTR GCA 90 bp | ATCACCTTCAACACACAGTCTGAAAAGTCTTCAGTTCCCACCAGACAGGGTAATAAAGGATGCATGGACTaGCATTCAGGCCTGAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ITFNTQSEKSSVPTRQGNKGCMD*HSGLKE Trigger: TTCCTTCAGGCCTGAATGGCAGTCCATGCATCCTTT...ATTACCCTGTCTGGTGGGAACTGAAGACTTTTCAGACTGTGTGTTGAAGGTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
||
| CDS-3UTR CCA 90 bp | ACTATCACCTTCAACACACAGTCTGAAAAGTCTTCAGTTCCCACCAGACAGGGTCTGGAAAGAGGATCATaGGGTATGACAAAAGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: TITFNTQSEKSSVPTRQGLERGS*GMTKGC Trigger: GCATCCTTTTGTCATACCCCATGATCCTCTTTCCAG...ACCCTGTCTGGTGGGAACTGAAGACTTTTCAGACTGTGTGTTGAAGGTGATAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
||
| CDS-3UTR TCA 90 bp | GGTCTGCTGCCACAGCACTGGAGGAGGCTTAACTCTCTAACAGTGAACTATGTATGCTATCTATACTACTaGAAGTATCTGTCTCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: GLLPQHWRRLNSLTVNYVCYLYY*KYLSHS Trigger: AGAGTGAGACAGATACTTTCAGTAGTATAGATAGCA...TACATAGTTCACTGTTAGAGAGTTAAGCCTCCTCCAGTGCTGTGGCAGCAGACC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
||
| CDS-3UTR TCA 90 bp | ATCACCTTCAACACACAGTCTGAAAAGTCTTCAGTTCCCACCAGACAGGGTAATACTGCCATTCAGGCCTaGAGGAAGGAAATGAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: ITFNTQSEKSSVPTRQGNTAIQA*RKEMKF Trigger: AAACTTCATTTCCTTCCTTCAGGCCTGAATGGCAGT...ATTACCCTGTCTGGTGGGAACTGAAGACTTTTCAGACTGTGTGTTGAAGGTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
||
| CDS-3UTR TCA 90 bp | CAGTGTAACAAAGGTATTCTAGTAAGAGGTGGTAGAGTTTCTTTCCAGTACTACCACCCATTCTGCATCTaGGAGTCATCTCGACCATGG | + |
|
Preference number: 4 (lower is better) Translates to: QCNKGILVRGGRVSFQYYHPFCI*ESSRPW Trigger: CCATGGTCGAGATGACTCTCAGATGCAGAATGGGTG...GTAGTACTGGAAAGAAACTCTACCACCTCTTACTAGAATACCTTTGTTACACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
||
| CDS-3UTR TCA 90 bp | GGTCTGCTGCCACAGCACTGGAGGAGGCTTAACTCTCTAACAGTGAACTATGTACCATTTCTAAAGGGATaGACATTATTGCTAGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: GLLPQHWRRLNSLTVNYVPFLKG*TLLLVT Trigger: TGTGACTAGCAATAATGTTCATCCCTTTAGAAATGG...TACATAGTTCACTGTTAGAGAGTTAAGCCTCCTCCAGTGCTGTGGCAGCAGACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
||
| CDS-3UTR GCA 90 bp | AAGTCAAGACAGGCTCACTACTTTGTTCTCAAAAGTAATCAATACGTCAGCCAAGAAGGCTTTCCATCCTaGAAAGCTGGGGAACCGATG | + |
|
Preference number: 4 (lower is better) Translates to: KSRQAHYFVLKSNQYVSQEGFPS*KAGEPM Trigger: CATCGGTTCCCCAGCTTTGCAGGATGGAAAGCCTTC...TTGGCTGACGTATTGATTACTTTTGAGAACAAAGTAGTGAGCCTGTCTTGACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
||
| CDS-3UTR CCA 90 bp | GGTCTGCTGCCACAGCACTGGAGGAGGCTTAACTCTCTAACAGTGAACTATGTATGTATCCTTTTCCTATaGCCATTTCTACATACGGTT | + |
|
Preference number: 4 (lower is better) Translates to: GLLPQHWRRLNSLTVNYVCILFL*PFLHTV Trigger: AACCGTATGTAGAAATGGCCATAGGAAAAGGATACA...TACATAGTTCACTGTTAGAGAGTTAAGCCTCCTCCAGTGCTGTGGCAGCAGACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
||
| 3UTR CAA 72 bp | TTCCCACCAGACAGGGTAATGATGGGTAATGTGGTTTaGTCTAGTTCTAAGATTAGTGCTCACACCATCGCT | + |
|
Preference number: 4 (lower is better) Translates to: FPPDRVMMGNVV*SSSKISAHTIA Trigger: AGCGATGGTGTGAGCACTAATCTTAGAACTAGACAAAACCACATTACCCATCATTACCCTGTCTGGTGGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
||
| CDS-3UTR TCA 90 bp | GGGCATGGTGGTTGTATACCTTTAATCCCAGTACTTGGAAGACACAGACAGATATGGGCATCACCAAGTTaGTTAACATTGTACCTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: GHGGCIPLIPVLGRHRQIWASPS*LTLYLY Trigger: GTACAGGTACAATGTTAATCAACTTGGTGATGCCCA...TATCTGTCTGTGTCTTCCAAGTACTGGGATTAAAGGTATACAACCACCATGCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
||
| CDS-3UTR GCA 90 bp | ATCACCTTCAACACACAGTCTGAAAAGTCTTCAGTTCCCACCAGACAGGGTAATGTCAATAGCTTGTTTTaGTCTGTTCTGGTTCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: ITFNTQSEKSSVPTRQGNVNSLF*SVLVPV Trigger: GACTGGAACCAGAACAGAGCAAAACAAGCTATTGAC...ATTACCCTGTCTGGTGGGAACTGAAGACTTTTCAGACTGTGTGTTGAAGGTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
||
| CDS-3UTR TCA 90 bp | AGGAAACACCTTGTGAGGCAGCAAAGTGGTTTTTATTTGAAACTACTCAAAAGTATGCCATCACGACTCTaGCCAAGCAGAATTCGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: RKHLVRQQSGFYLKLLKSMPSRL*PSRIRD Trigger: GTCTCGAATTCTGCTTGGTCAGAGTCGTGATGGCAT...ACTTTTGAGTAGTTTCAAATAAAAACCACTTTGCTGCCTCACAAGGTGTTTCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000118316.8 ENSMUST00000156180.2 |
||
| CDS-3UTR TCA 90 bp | AAGTCAAGACAGGCTCACTACTTTGTTCTCAAAAGTAATCAATACGTCAGCCAAAATAGTCATCAGTGCTaGACACGATGCCATCACGAC | + |
|
Preference number: 4 (lower is better) Translates to: KSRQAHYFVLKSNQYVSQNSHQC*TRCHHD Trigger: GTCGTGATGGCATCGTGTTCAGCACTGATGACTATT...TTGGCTGACGTATTGATTACTTTTGAGAACAAAGTAGTGAGCCTGTCTTGACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118316.8 ENSMUST00000156180.2 |
||
| CDS-3UTR CCA 90 bp | GGGCATGGTGGTTGTATACCTTTAATCCCAGTACTTGGAAGACACAGACAGATATTAACACATCTGTACTaGTTTTGTCTTCCTGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: GHGGCIPLIPVLGRHRQILTHLY*FCLPED Trigger: GTCCTCAGGAAGACAAAACCAGTACAGATGTGTTAA...TATCTGTCTGTGTCTTCCAAGTACTGGGATTAAAGGTATACAACCACCATGCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
||
| 3UTR CAA 72 bp | AGTCTATGTGTACAGGTGCATAAAAGGCTAGAGATATaGGATTCCACAATACCTGGAGTTACAAGGGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SLCVQVHKRLEI*DSTIPGVTRGH Trigger: ATGACCCCTTGTAACTCCAGGTATTGTGGAATCCAATATCTCTAGCCTTTTATGCACCTGTACACATAGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
||
| CDS-3UTR TCA 90 bp | TGGTTTTTATTTGAAACTACTCAAAAGTCAAGACAGGCTCACTACTTTGTTCTCATGCCATCACGACTCTaGCCAAGCAGAATTCGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: WFLFETTQKSRQAHYFVLMPSRL*PSRIRD Trigger: GTCTCGAATTCTGCTTGGTCAGAGTCGTGATGGCAT...GAGAACAAAGTAGTGAGCCTGTCTTGACTTTTGAGTAGTTTCAAATAAAAACCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000118316.8 ENSMUST00000156180.2 |
||
| CDS-3UTR CCA 90 bp | AAAAGTCAAGACAGGCTCACTACTTTGTTCTCAAAAGTAATCAATACGTCAGCCTGTTTTGCTCTGTTCTaGTTCCAGTCATGGGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: KSQDRLTTLFSKVINTSACFALF*FQSWAS Trigger: TGATGCCCATGACTGGAACCAGAACAGAGCAAAACA...GGCTGACGTATTGATTACTTTTGAGAACAAAGTAGTGAGCCTGTCTTGACTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
||
| CDS-3UTR CCA 90 bp | GGGCATGGTGGTTGTATACCTTTAATCCCAGTACTTGGAAGACACAGACAGATATCATCACAATGGAGATaGACATTTGAAATTCGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: GHGGCIPLIPVLGRHRQISSQWR*TFEIRS Trigger: GCTACGAATTTCAAATGTCCATCTCCATTGTGATGA...TATCTGTCTGTGTCTTCCAAGTACTGGGATTAAAGGTATACAACCACCATGCCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
||
| CDS-3UTR GCA 90 bp | ATTTGTGGCATAACACCCTCTTTTTCCTGTATAAAGCCTGAAAGTGATGTGTTACCAGGCATCTCCTTGTaGAATGGCTTTAACACATCT | + |
|
Preference number: 4 (lower is better) Translates to: ICGITPSFSCIKPESDVLPGISL*NGFNTS Trigger: AGATGTGTTAAAGCCATTGCACAAGGAGATGCCTGG...TAACACATCACTTTCAGGCTTTATACAGGAAAAAGAGGGTGTTATGCCACAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
||
| CDS-3UTR CCA 90 bp | ATTTGTGGCATAACACCCTCTTTTTCCTGTATAAAGCCTGAAAGTGATGTGTTAGAGTCATCTCGACCATaGAAAACATCTGGTGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: ICGITPSFSCIKPESDVLESSRP*KTSGDG Trigger: TCCATCACCAGATGTTTTCCATGGTCGAGATGACTC...TAACACATCACTTTCAGGCTTTATACAGGAAAAAGAGGGTGTTATGCCACAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
||
| CDS-3UTR CCA 90 bp | GGGCATGGTGGTTGTATACCTTTAATCCCAGTACTTGGAAGACACAGACAGATACTGAGTTCATCACAATaGAGATGGACATTTGAAATT | + |
|
Preference number: 4 (lower is better) Translates to: GHGGCIPLIPVLGRHRQILSSSQ*RWTFEI Trigger: AATTTCAAATGTCCATCTCCATTGTGATGAACTCAG...TATCTGTCTGTGTCTTCCAAGTACTGGGATTAAAGGTATACAACCACCATGCCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
||
| CDS-3UTR CCA 90 bp | TGGTTTTTATTTGAAACTACTCAAAAGTCAAGACAGGCTCACTACTTTGTTCTCATTCCTCCTCTGTTCTaGTTCCAGTCATGGGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: WFLFETTQKSRQAHYFVLIPPLF*FQSWAS Trigger: TGATGCCCATGACTGGAACCAGAACAGAGGAGGAAT...GAGAACAAAGTAGTGAGCCTGTCTTGACTTTTGAGTAGTTTCAAATAAAAACCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156180.2 |
||
| 3UTR CAA 72 bp | AGGAAACACCTTGTGAGGCAGCAAAGTGGTTTTTATTaGAAACTACTCAAAAGTCAAGACAGGCTCACTACT | + |
|
Preference number: 4 (lower is better) Translates to: RKHLVRQQSGFY*KLLKSQDRLTT Trigger: AGTAGTGAGCCTGTCTTGACTTTTGAGTAGTTTCAAATAAAAACCACTTTGCTGCCTCACAAGGTGTTTCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000118316.8 ENSMUST00000156180.2 |
||
| CDS-3UTR TCA 90 bp | CTCAAAAGTCAAGACAGGCTCACTACTTTGTTCTCAAAAGTAATCAATACGTCATGGGCATCACCAAGTTaGTTAACATTGTACCTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LKSQDRLTTLFSKVINTSWASPS*LTLYLY Trigger: GTACAGGTACAATGTTAATCAACTTGGTGATGCCCA...TGACGTATTGATTACTTTTGAGAACAAAGTAGTGAGCCTGTCTTGACTTTTGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118316.8 ENSMUST00000156180.2 |
||
| CDS-3UTR GCA 90 bp | AAGTCAAGACAGGCTCACTACTTTGTTCTCAAAAGTAATCAATACGTCAGCCAATTTCTAGACACACCATaGTTATTCCTCCTCTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KSRQAHYFVLKSNQYVSQFLDTP*LFLLCS Trigger: AGAACAGAGGAGGAATAAGCATGGTGTGTCTAGAAA...TTGGCTGACGTATTGATTACTTTTGAGAACAAAGTAGTGAGCCTGTCTTGACTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156180.2 |
||
| CDS-3UTR CCA 90 bp | AGGAAACACCTTGTGAGGCAGCAAAGTGGTTTTTATTTGAAACTACTCAAAAGTACTGGAGATCTCCCTTaGTCAATAGCTTGTTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RKHLVRQQSGFYLKLLKSTGDLP*SIACFA Trigger: AGCAAAACAAGCTATTGACCAAGGGAGATCTCCAGT...ACTTTTGAGTAGTTTCAAATAAAAACCACTTTGCTGCCTCACAAGGTGTTTCCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
||
| 3UTR CAA 72 bp | ACCCATCAACTGAATCCTCCCATCACCATAATTTGGTaGCTGAAACACTTCCTCCTAAAATCTATACATCAA | + |
|
Preference number: 4 (lower is better) Translates to: THQLNPPITIIW*LKHFLLKSIHQ Trigger: TTGATGTATAGATTTTAGGAGGAAGTGTTTCAGCAACCAAATTATGGTGATGGGAGGATTCAGTTGATGGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
||
| CDS-3UTR GCA 90 bp | CAGTGTAACAAAGGTATTCTAGTAAGAGGTGGTAGAGTTTCTTTCCAGTACTACAATGGGGCCTATGAATaGTTTACTTGTGCTATAGAT | + |
|
Preference number: 4 (lower is better) Translates to: QCNKGILVRGGRVSFQYYNGAYE*FTCAID Trigger: ATCTATAGCACAAGTAAAGCATTCATAGGCCCCATT...GTAGTACTGGAAAGAAACTCTACCACCTCTTACTAGAATACCTTTGTTACACTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
||
| CDS-3UTR GCA 90 bp | TGGTTTTTATTTGAAACTACTCAAAAGTCAAGACAGGCTCACTACTTTGTTCTCGAAGGGGTCTTTGTATaGTTTTCTGTGTTGGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: WFLFETTQKSRQAHYFVLEGVFV*FSVLVP Trigger: TGGAACCAACACAGAAAAGCATACAAAGACCCCTTC...GAGAACAAAGTAGTGAGCCTGTCTTGACTTTTGAGTAGTTTCAAATAAAAACCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
||
| 3UTR CAA 72 bp | TATAACCCATCAACTGAATCCTCCCATCACCATAATTaGGTTGCTGAAACACTTCCTCCTAAAATCTATACA | + |
|
Preference number: 4 (lower is better) Translates to: YNPSTESSHHHN*VAETLPPKIYT Trigger: TGTATAGATTTTAGGAGGAAGTGTTTCAGCAACCAAATTATGGTGATGGGAGGATTCAGTTGATGGGTTATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
||
| CDS-3UTR CCA 90 bp | AGGAAACACCTTGTGAGGCAGCAAAGTGGTTTTTATTTGAAACTACTCAAAAGTCGACCCTATTATTTCTaGGTTTTTCTTGGATTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RKHLVRQQSGFYLKLLKSRPYYF*VFLGFC Trigger: ACAGAATCCAAGAAAAACCCAGAAATAATAGGGTCG...ACTTTTGAGTAGTTTCAAATAAAAACCACTTTGCTGCCTCACAAGGTGTTTCCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
||
| CDS-3UTR CCA 90 bp | AGGAAACACCTTGTGAGGCAGCAAAGTGGTTTTTATTTGAAACTACTCAAAAGTGTCATAAGAAATAATTaGTTCTTCGGAAGGTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RKHLVRQQSGFYLKLLKSVIRNN*FFGRFW Trigger: CCAGAACCTTCCGAAGAACCAATTATTTCTTATGAC...ACTTTTGAGTAGTTTCAAATAAAAACCACTTTGCTGCCTCACAAGGTGTTTCCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
||
| CDS-3UTR CCA 90 bp | CTCAAAAGTCAAGACAGGCTCACTACTTTGTTCTCAAAAGTAATCAATACGTCAGTTGTCTATTATAACTaGAGATCTCCCTTGGTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: LKSQDRLTTLFSKVINTSVVYYN*RSPLVN Trigger: ATTGACCAAGGGAGATCTCCAGTTATAATAGACAAC...TGACGTATTGATTACTTTTGAGAACAAAGTAGTGAGCCTGTCTTGACTTTTGAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
||
| 3UTR CAA 72 bp | AGAAAAAGAAAGATGCCGGAAACCAACAGGTACATTTaGCATTGGCTTTTTAGCATCCAATGTCTTATGATT | + |
|
Preference number: 4 (lower is better) Translates to: RKRKMPETNRYI*HWLFSIQCLMI Trigger: AATCATAAGACATTGGATGCTAAAAAGCCAATGCAAAATGTACCTGTTGGTTTCCGGCATCTTTCTTTTTCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
||
| CDS-3UTR CAA 90 bp | CACGCCTTTAATCCCAGCACTCCGGAGGCAGGGGCAGGCAGATTTCTGAGTTTGGTATGCTTTTCTGTGTaGGTTCCACTGAGTTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: HAFNPSTPEAGAGRFLSLVCFSV*VPLSSS Trigger: TGATGAACTCAGTGGAACCAACACAGAAAAGCATAC...CAAACTCAGAAATCTGCCTGCCCCTGCCTCCGGAGTGCTGGGATTAAAGGCGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
||
| CDS-3UTR CAA 90 bp | ACTATCACCTTCAACACACAGTCTGAAAAGTCTTCAGTTCCCACCAGACAGGGTGCATGGTTCTCTTGTTaGTTCTTTTCCAGGTCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: TITFNTQSEKSSVPTRQGAWFSC*FFSRSQ Trigger: TTGGGACCTGGAAAAGAACAAACAAGAGAACCATGC...ACCCTGTCTGGTGGGAACTGAAGACTTTTCAGACTGTGTGTTGAAGGTGATAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
||
| CDS-3UTR CAA 90 bp | AATAGCAGTCAGAGTCTCACTAACAGGAGAGTAAGGAAGAGACCTAGCCTGCAAAACTGGAGATCTCCCTaGGTCAATAGCTTGTTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: NSSQSLTNRRVRKRPSLQNWRSP*VNSLFC Trigger: GCAAAACAAGCTATTGACCAAGGGAGATCTCCAGTT...TTGCAGGCTAGGTCTCTTCCTTACTCTCCTGTTAGTGAGACTCTGACTGCTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
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| CDS TCA 90 bp | CATTGTACCTGTACCCATCTTGATGATGAAAATAGTCATCAGTGCTaGACACGATGCCATCACGACTCTGACCAAGCAGAATTCGAGACA | + |
|
Preference number: 5 (lower is better) Translates to: HCTCTHLDDENSHQC*TRCHHDSDQAEFET Trigger: TGTCTCGAATTCTGCTTGGTCAGAGTCGTGATGGCATCGTGTTCAGCACTGATGACTATTTTCATCATCAAGATGGGTACAGGTACAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118316.8 ENSMUST00000156180.2 |
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| CDS TCA 90 bp | CTCGAGAGGAAGGGGTCTTTGTATGCTTTTCTGTGTTGGTTCCACTaGGTTCATCACAATGGAGATGGACATTTGAAATTCGTAGCGATC | + |
|
Preference number: 5 (lower is better) Translates to: LERKGSLYAFLCWFH*VHHNGDGHLKFVAI Trigger: GATCGCTACGAATTTCAAATGTCCATCTCCATTGTGATGAACTCAGTGGAACCAACACAGAAAAGCATACAAAGACCCCTTCCTCTCGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
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| CDS CCA 90 bp | GAAACCACTGGTTCACAAACCTGTCTGTTTCATTATGCTTGTCCATaGAAGGATCTTGCCAGCACTCTCGGATTTCACAGAAACCATTAT | + |
|
Preference number: 5 (lower is better) Translates to: ETTGSQTCLFHYACP*KDLASTLGFHRNHY Trigger: ATAATGGTTTCTGTGAAATCCGAGAGTGCTGGCAAGATCCTTCCATGGACAAGCATAATGAAACAGACAGGTTTGTGAACCAGTGGTTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118316.8 ENSMUST00000156180.2 |
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| CDS CCA 90 bp | GTATGCTTTTCTGTGTTGGTTCCACTGAGTTCATCACAATGGAGATaGACATTTGAAATTCGTAGCGATCCAGCATCTGGGCAATCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: VCFSVLVPLSSSQWR*TFEIRSDPASGQSS Trigger: AGAAGATTGCCCAGATGCTGGATCGCTACGAATTTCAAATGTCCATCTCCATTGTGATGAACTCAGTGGAACCAACACAGAAAAGCATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
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| CDS CCA 90 bp | GTCTTTGTATGCTTTTCTGTGTTGGTTCCACTGAGTTCATCACAATaGAGATGGACATTTGAAATTCGTAGCGATCCAGCATCTGGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: VFVCFSVLVPLSSSQ*RWTFEIRSDPASGQ Trigger: TTGCCCAGATGCTGGATCGCTACGAATTTCAAATGTCCATCTCCATTGTGATGAACTCAGTGGAACCAACACAGAAAAGCATACAAAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
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| CDS-3UTR CAA 90 bp | AATAGCAGTCAGAGTCTCACTAACAGGAGAGTAAGGAAGAGACCTAGCCTGCAATATAGCATGGTTCTCTaGTTTGTTCTTTTCCAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: NSSQSLTNRRVRKRPSLQYSMVL*FVLFQV Trigger: GACCTGGAAAAGAACAAACAAGAGAACCATGCTATA...TTGCAGGCTAGGTCTCTTCCTTACTCTCCTGTTAGTGAGACTCTGACTGCTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
||
| CDS TCA 90 bp | CCTCCAAGTACTCTTGATAACCACAATGTGACTGAAGAACATCACTaGGATCTTTGTTTTCCTCCTCAGACTTTAGAGTATTACAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: PPSTLDNHNVTEEHH*DLCFPPQTLEYYRP Trigger: GGGCCTGTAATACTCTAAAGTCTGAGGAGGAAAACAAAGATCTCAGTGATGTTCTTCAGTCACATTGTGGTTATCAAGAGTACTTGGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
||
| CDS CCA 90 bp | ATTACAGGCCCAGTCATAAGAAATAATTGGTTCTTCGGAAGGTTCTaGTTCCGTACAACTGCCTTGGGAAGCTTCATTTTCATTTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: ITGPVIRNNWFFGRF*FRTTALGSFIFIFQ Trigger: CTGGAAAATGAAAATGAAGCTTCCCAAGGCAGTTGTACGGAACCAGAACCTTCCGAAGAACCAATTATTTCTTATGACTGGGCCTGTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
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| CDS-3UTR CAA 90 bp | ATCACCTTCAACACACAGTCTGAAAAGTCTTCAGTTCCCACCAGACAGGGTAATACATCACTGAGATCTTaGTTTTCCTCCTCAGACTTT | + |
|
Preference number: 5 (lower is better) Translates to: ITFNTQSEKSSVPTRQGNTSLRS*FSSSDF Trigger: AAAGTCTGAGGAGGAAAACAAAGATCTCAGTGATGT...ATTACCCTGTCTGGTGGGAACTGAAGACTTTTCAGACTGTGTGTTGAAGGTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
||
| CDS GCA 90 bp | TTCACAAACCTGTCTGTTTCATTATGCTTGTCCATGGAAGGATCTTaGCAGCACTCTCGGATTTCACAGAAACCATTATTCACACTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: FTNLSVSLCLSMEGS*QHSRISQKPLFTLS Trigger: TGAAAGTGTGAATAATGGTTTCTGTGAAATCCGAGAGTGCTGGCAAGATCCTTCCATGGACAAGCATAATGAAACAGACAGGTTTGTGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118316.8 ENSMUST00000156180.2 |
||
| CDS-3UTR CAA 90 bp | GGGCATGGTGGTTGTATACCTTTAATCCCAGTACTTGGAAGACACAGACAGATATTTCATTTCCCAGGCTaGTGTATTAGTGTTGTCTAT | + |
|
Preference number: 5 (lower is better) Translates to: GHGGCIPLIPVLGRHRQIFHFPG*CISVVY Trigger: ATAGACAACACTAATACACAAGCCTGGGAAATGAAA...TATCTGTCTGTGTCTTCCAAGTACTGGGATTAAAGGTATACAACCACCATGCCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
||
| CDS-3UTR CAA 90 bp | CTCAAAAGTCAAGACAGGCTCACTACTTTGTTCTCAAAAGTAATCAATACGTCAGAGAGGAAGGGGTCTTaGTATGCTTTTCTGTGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LKSQDRLTTLFSKVINTSERKGS*YAFLCW Trigger: CCAACACAGAAAAGCATACAAAGACCCCTTCCTCTC...TGACGTATTGATTACTTTTGAGAACAAAGTAGTGAGCCTGTCTTGACTTTTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
||
| CDS-3UTR CAA 90 bp | AAGTCAAGACAGGCTCACTACTTTGTTCTCAAAAGTAATCAATACGTCAGCCAATCTGTTTCATTATGCTaGTCCATGGAAGGATCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: KSRQAHYFVLKSNQYVSQSVSLC*SMEGSC Trigger: GCAAGATCCTTCCATGGACAAGCATAATGAAACAGA...TTGGCTGACGTATTGATTACTTTTGAGAACAAAGTAGTGAGCCTGTCTTGACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118316.8 ENSMUST00000156180.2 |
||
| CDS-3UTR CAA 90 bp | CTCAAAAGTAATCAATACGTCAGCCAAAACAGCCAACTTAATAGTCATCTGCGAGTACCTGTACCCATCTaGATGATGAAAATAGTCATC | + |
|
Preference number: 5 (lower is better) Translates to: LKSNQYVSQNSQLNSHLRVPVPI*MMKIVI Trigger: GATGACTATTTTCATCATCAAGATGGGTACAGGTAC...TCGCAGATGACTATTAAGTTGGCTGTTTTGGCTGACGTATTGATTACTTTTGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000156180.2 |
||
| CDS TCA 90 bp | TTTTCTAATTCTTCAGGATCAAACTTCCACCAAGTTTCCGGTTCATaGAACTCTACTCTGTATCCTTTTCCTATGGCCATTTCTACATAC | + |
|
Preference number: 5 (lower is better) Translates to: FSNSSGSNFHQVSGS*NSTLYPFPMAISTY Trigger: GTATGTAGAAATGGCCATAGGAAAAGGATACAGAGTAGAGTTTCATGAACCGGAAACTTGGTGGAAGTTTGATCCTGAAGAATTAGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
||
| CDS-3UTR CAA 90 bp | TTGTTCTCAAAAGTAATCAATACGTCAGCCAAAACAGCCAACTTAATAGTCATCTCTGTTTCATTATGCTaGTCCATGGAAGGATCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: LFSKVINTSAKTANLIVISVSLC*SMEGSC Trigger: GCAAGATCCTTCCATGGACAAGCATAATGAAACAGA...GATGACTATTAAGTTGGCTGTTTTGGCTGACGTATTGATTACTTTTGAGAACAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156180.2 |
||
| CDS-3UTR CAA 90 bp | CTCAAAAGTCAAGACAGGCTCACTACTTTGTTCTCAAAAGTAATCAATACGTCAGTACCTGTACCCATCTaGATGATGAAAATAGTCATC | + |
|
Preference number: 5 (lower is better) Translates to: LKSQDRLTTLFSKVINTSVPVPI*MMKIVI Trigger: GATGACTATTTTCATCATCAAGATGGGTACAGGTAC...TGACGTATTGATTACTTTTGAGAACAAAGTAGTGAGCCTGTCTTGACTTTTGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000118316.8 ENSMUST00000156180.2 |
||
| CDS-3UTR CAA 90 bp | AGGAAACACCTTGTGAGGCAGCAAAGTGGTTTTTATTTGAAACTACTCAAAAGTATGGGCATCACCAAGTaGATTAACATTGTACCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: RKHLVRQQSGFYLKLLKSMGITK*INIVPV Trigger: TACAGGTACAATGTTAATCAACTTGGTGATGCCCAT...ACTTTTGAGTAGTTTCAAATAAAAACCACTTTGCTGCCTCACAAGGTGTTTCCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000118316.8 ENSMUST00000156180.2 |
||
| CDS-3UTR CAA 90 bp | TGGTTTTTATTTGAAACTACTCAAAAGTCAAGACAGGCTCACTACTTTGTTCTCATGGGCATCACCAAGTaGATTAACATTGTACCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: WFLFETTQKSRQAHYFVLMGITK*INIVPV Trigger: TACAGGTACAATGTTAATCAACTTGGTGATGCCCAT...GAGAACAAAGTAGTGAGCCTGTCTTGACTTTTGAGTAGTTTCAAATAAAAACCA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000118316.8 ENSMUST00000156180.2 |
||
| CDS TCA 90 bp | CGCAAAAGAATAAGCAATTTCTGCAATTTATTTAATTTCTCCTCTTaGAACCACTGGTTCACAAACCTGTCTGTTTCATTATGCTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: RKRISNFCNLFNFSS*NHWFTNLSVSLCLS Trigger: GGACAAGCATAATGAAACAGACAGGTTTGTGAACCAGTGGTTTCAAGAGGAGAAATTAAATAAATTGCAGAAATTGCTTATTCTTTTGCG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118316.8 ENSMUST00000156180.2 |
||
| CDS GCA 72 bp | TCATCATCCTTGGCCAGTGGTGAAGGCTTTCCATCCTaGAAAGCTGGGGAACCGATGGATTCACTACCACCC | + |
|
Preference number: 6 (lower is better) Translates to: SSSLASGEGFPS*KAGEPMDSLPP Trigger: GGGTGGTAGTGAATCCATCGGTTCCCCAGCTTTGCAGGATGGAAAGCCTTCACCACTGGCCAAGGATGATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
||
| CDS GCA 72 bp | AAACTGGAAAGAGGATCATGGGGTATGACAAAAGGATaGATGGACTGCCATTCAGGCCTGAAGGAAGGAAAT | + |
|
Preference number: 6 (lower is better) Translates to: KLERGSWGMTKG*MDCHSGLKEGN Trigger: ATTTCCTTCCTTCAGGCCTGAATGGCAGTCCATGCATCCTTTTGTCATACCCCATGATCCTCTTTCCAGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
||
| CDS CCA 72 bp | TCTGTGTTGGTTCCACTGAGTTCATCACAATGGAGATaGACATTTGAAATTCGTAGCGATCCAGCATCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: SVLVPLSSSQWR*TFEIRSDPASG Trigger: CCCAGATGCTGGATCGCTACGAATTTCAAATGTCCATCTCCATTGTGATGAACTCAGTGGAACCAACACAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
||
| CDS CAA 72 bp | AACCACTGGTTCACAAACCTGTCTGTTTCATTATGCTaGTCCATGGAAGGATCTTGCCAGCACTCTCGGATT | + |
|
Preference number: 6 (lower is better) Translates to: NHWFTNLSVSLC*SMEGSCQHSRI Trigger: AATCCGAGAGTGCTGGCAAGATCCTTCCATGGACAAGCATAATGAAACAGACAGGTTTGTGAACCAGTGGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118316.8 ENSMUST00000156180.2 |
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| CDS TCA 72 bp | TGTACCCATCTTGATGATGAAAATAGTCATCAGTGCTaGACACGATGCCATCACGACTCTGACCAAGCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: CTHLDDENSHQC*TRCHHDSDQAE Trigger: TTCTGCTTGGTCAGAGTCGTGATGGCATCGTGTTCAGCACTGATGACTATTTTCATCATCAAGATGGGTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118316.8 ENSMUST00000156180.2 |
||
| CDS GCA 72 bp | TCACTACCACCCAGTTTATCACCAGGCATCTCCTTGTaGAATGGCTTTAACACATCTGTACTGGTTTTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: SLPPSLSPGISL*NGFNTSVLVLS Trigger: AGACAAAACCAGTACAGATGTGTTAAAGCCATTGCACAAGGAGATGCCTGGTGATAAACTGGGTGGTAGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
||
| CDS CCA 72 bp | AAATGCAGGCATCAACTGCTCATCACAGGGATAGTCTaGTTCATCCTCCAAGTACTCTTGATAACCACAATG | + |
|
Preference number: 6 (lower is better) Translates to: KCRHQLLITGIV*FILQVLLITTM Trigger: CATTGTGGTTATCAAGAGTACTTGGAGGATGAACCAGACTATCCCTGTGATGAGCAGTTGATGCCTGCATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
||
| CDS CAA 72 bp | GATTCACTACCACCCAGTTTATCACCAGGCATCTCCTaGTGCAATGGCTTTAACACATCTGTACTGGTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: DSLPPSLSPGIS*CNGFNTSVLVL Trigger: CAAAACCAGTACAGATGTGTTAAAGCCATTGCACAAGGAGATGCCTGGTGATAAACTGGGTGGTAGTGAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
||
| CDS CAA 72 bp | TGCTCTGTTCTGGTTCCAGTCATGGGCATCACCAAGTaGATTAACATTGTACCTGTACCCATCTTGATGATG | + |
|
Preference number: 6 (lower is better) Translates to: CSVLVPVMGITK*INIVPVPILMM Trigger: CATCATCAAGATGGGTACAGGTACAATGTTAATCAACTTGGTGATGCCCATGACTGGAACCAGAACAGAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
||
| CDS CAA 72 bp | TCCTCTGTTCTGGTTCCAGTCATGGGCATCACCAAGTaGATTAACATTGTACCTGTACCCATCTTGATGATG | + |
|
Preference number: 6 (lower is better) Translates to: SSVLVPVMGITK*INIVPVPILMM Trigger: CATCATCAAGATGGGTACAGGTACAATGTTAATCAACTTGGTGATGCCCATGACTGGAACCAGAACAGAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156180.2 |
||
| CDS TCA 72 bp | AATGGCTTTAACACATCTGTACTGGTTTTGTCTTCCTaGGGACAAACACGTCTTCTGAAGTTAATGGTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: NGFNTSVLVLSS*GQTRLLKLMVA Trigger: GGCCACCATTAACTTCAGAAGACGTGTTTGTCCTCAGGAAGACAAAACCAGTACAGATGTGTTAAAGCCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
||
| CDS CCA 72 bp | CCAGTCATAAGAAATAATTGGTTCTTCGGAAGGTTCTaGTTCCGTACAACTGCCTTGGGAAGCTTCATTTTC | + |
|
Preference number: 6 (lower is better) Translates to: PVIRNNWFFGRF*FRTTALGSFIF Trigger: GAAAATGAAGCTTCCCAAGGCAGTTGTACGGAACCAGAACCTTCCGAAGAACCAATTATTTCTTATGACTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
||
| CDS CCA 72 bp | TGCTTTTCTGTGTTGGTTCCACTGAGTTCATCACAATaGAGATGGACATTTGAAATTCGTAGCGATCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: CFSVLVPLSSSQ*RWTFEIRSDPA Trigger: TGCTGGATCGCTACGAATTTCAAATGTCCATCTCCATTGTGATGAACTCAGTGGAACCAACACAGAAAAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
||
| CDS CAA 90 bp | GTTCACAAACCTGTCTGTTTCATTATGCTTGTCCATGGAAGGATCTaGCCAGCACTCTCGGATTTCACAGAAACCATTATTCACACTTTC | + |
|
Preference number: 6 (lower is better) Translates to: VHKPVCFIMLVHGRI*PALSDFTETIIHTF Trigger: GAAAGTGTGAATAATGGTTTCTGTGAAATCCGAGAGTGCTGGCAAGATCCTTCCATGGACAAGCATAATGAAACAGACAGGTTTGTGAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118316.8 ENSMUST00000156180.2 |
||
| CDS CAA 90 bp | GCTTATTCCTCCTCTGTTCTGGTTCCAGTCATGGGCATCACCAAGTaGATTAACATTGTACCTGTACCCATCTTGATGATGAAAATAGTC | + |
|
Preference number: 6 (lower is better) Translates to: AYSSSVLVPVMGITK*INIVPVPILMMKIV Trigger: GACTATTTTCATCATCAAGATGGGTACAGGTACAATGTTAATCAACTTGGTGATGCCCATGACTGGAACCAGAACAGAGGAGGAATAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156180.2 |
||
| CDS TCA 72 bp | TCTTCAGGATCAAACTTCCACCAAGTTTCCGGTTCATaGAACTCTACTCTGTATCCTTTTCCTATGGCCATT | + |
|
Preference number: 6 (lower is better) Translates to: SSGSNFHQVSGS*NSTLYPFPMAI Trigger: AATGGCCATAGGAAAAGGATACAGAGTAGAGTTTCATGAACCGGAAACTTGGTGGAAGTTTGATCCTGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
||
| CDS CAA 90 bp | AGCTTGTTTTGCTCTGTTCTGGTTCCAGTCATGGGCATCACCAAGTaGATTAACATTGTACCTGTACCCATCTTGATGATGAAAATAGTC | + |
|
Preference number: 6 (lower is better) Translates to: SLFCSVLVPVMGITK*INIVPVPILMMKIV Trigger: GACTATTTTCATCATCAAGATGGGTACAGGTACAATGTTAATCAACTTGGTGATGCCCATGACTGGAACCAGAACAGAGCAAAACAAGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
||
| CDS CAA 90 bp | CCAGCACTCTCGGATTTCACAGAAACCATTATTCACACTTTCATCTaGTACACTGCAGCCATTTCTAAAGGGATGAACATTATTGCTAGT | + |
|
Preference number: 6 (lower is better) Translates to: PALSDFTETIIHTFI*YTAAISKGMNIIAS Trigger: ACTAGCAATAATGTTCATCCCTTTAGAAATGGCTGCAGTGTACAAGATGAAAGTGTGAATAATGGTTTCTGTGAAATCCGAGAGTGCTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
||
| CDS CAA 72 bp | TGTATTAGTGTTGTCTATTATAACTGGAGATCTCCCTaGGTCAATAGCTTGTTTTGCTCTGTTCTGGTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: CISVVYYNWRSP*VNSLFCSVLVP Trigger: TGGAACCAGAACAGAGCAAAACAAGCTATTGACCAAGGGAGATCTCCAGTTATAATAGACAACACTAATACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
||
| CDS TCA 72 bp | ACTCTTGATAACCACAATGTGACTGAAGAACATCACTaGGATCTTTGTTTTCCTCCTCAGACTTTAGAGTAT | + |
|
Preference number: 6 (lower is better) Translates to: TLDNHNVTEEHH*DLCFPPQTLEY Trigger: ATACTCTAAAGTCTGAGGAGGAAAACAAAGATCTCAGTGATGTTCTTCAGTCACATTGTGGTTATCAAGAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
||
| CDS CAA 72 bp | TCGGATTTCACAGAAACCATTATTCACACTTTCATCTaGTACACTGCAGCCATTTCTAAAGGGATGAACATT | + |
|
Preference number: 6 (lower is better) Translates to: SDFTETIIHTFI*YTAAISKGMNI Trigger: AATGTTCATCCCTTTAGAAATGGCTGCAGTGTACAAGATGAAAGTGTGAATAATGGTTTCTGTGAAATCCGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118316.8 |
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