Pregenerated sensors for N4BP2L1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041132Ensembl transcript IDs: ENSMUST00000016279.11, ENSMUST00000200840.2, ENSMUST00000201319.2, ENSMUST00000202031.4, ENSMUST00000202279.4
Found 114 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCCGGTTGGGGAGCTCTGTGTAGGTGTTCCAGTAGCCGGAGCCACTaGACGGTTCGCTGTTCCTGCCCTGGTTTCTGTTCGCTCTGCTCG | + |
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Preference number: 1 (lower is better) Translates to: SGWGALCRCSSSRSH*TVRCSCPGFCSLCS Trigger: CGAGCAGAGCGAACAGAAACCAGGGCAGGAACAGCGAACCGTCCAGTGGCTCCGGCTACTGGAACACCTACACAGAGCTCCCCAACCGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202279.4 |
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| 3UTR GCA 90 bp | GAGGCAGATAGATCATCAAAGCGGCAATGGCACCAAGCTGCTTCCTaGCTCTGCCTCCCTCACCTCTCCAGCTCTGTGGAGAGGCTGGAT | + |
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Preference number: 1 (lower is better) Translates to: EADRSSKRQWHQAAS*LCLPHLSSSVERLD Trigger: ATCCAGCCTCTCCACAGAGCTGGAGAGGTGAGGGAGGCAGAGGCAGGAAGCAGCTTGGTGCCATTGCCGCTTTGATGATCTATCTGCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016279.11 ENSMUST00000202031.4 |
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| 3UTR GCA 90 bp | GATAGATCATCAAAGCGGCAATGGCACCAAGCTGCTTCCTGCCTCTaGCTCCCTCACCTCTCCAGCTCTGTGGAGAGGCTGGATCTGTCA | + |
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Preference number: 1 (lower is better) Translates to: DRSSKRQWHQAASCL*LPHLSSSVERLDLS Trigger: TGACAGATCCAGCCTCTCCACAGAGCTGGAGAGGTGAGGGAGGCAGAGGCAGGAAGCAGCTTGGTGCCATTGCCGCTTTGATGATCTATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016279.11 ENSMUST00000202031.4 |
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| 3UTR GCA 90 bp | GGTCTTGCTGTGACTTCCAGACTGGTTCTTACTTGCAACCCACCCTaGGGAACTTTATATATAAACCCACAGCCCACCGGGAGGCATGCC | + |
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Preference number: 1 (lower is better) Translates to: GLAVTSRLVLTCNPP*GTLYINPQPTGRHA Trigger: GGCATGCCTCCCGGTGGGCTGTGGGTTTATATATAAAGTTCCGCAGGGTGGGTTGCAAGTAAGAACCAGTCTGGAAGTCACAGCAAGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000200840.2 ENSMUST00000201319.2 |
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| 3UTR TCA 90 bp | AAAATCCTGGTGCCATGGAAATCAGCATGTGACCGCGGGCTACCTTaGTTCTTCAGCGGTTCCAGGGTCCTAGGGCTAGCCTTATCTGAT | + |
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Preference number: 1 (lower is better) Translates to: KILVPWKSACDRGLP*FFSGSRVLGLALSD Trigger: ATCAGATAAGGCTAGCCCTAGGACCCTGGAACCGCTGAAGAATCAAGGTAGCCCGCGGTCACATGCTGATTTCCATGGCACCAGGATTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200840.2 |
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| 3UTR TCA 90 bp | CTAGCCTTATCTGATGAGAAGGGAAGCAAGCACACAGGTGGCAAGTaGCTGCTTCTATCGACTAGTGTGTGCCCGATAACGTTCACGGAG | + |
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Preference number: 1 (lower is better) Translates to: LALSDEKGSKHTGGK*LLLSTSVCPITFTE Trigger: CTCCGTGAACGTTATCGGGCACACACTAGTCGATAGAAGCAGTCACTTGCCACCTGTGTGCTTGCTTCCCTTCTCATCAGATAAGGCTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200840.2 |
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| 3UTR CCA 90 bp | TCTCAACACCACATACAACAGCCAGACTGCTCATCCAGGTGGGCATaGCTTTCATATCTCCTTGTATCACCCTGGCTGCTTCCTTGCTTT | + |
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Preference number: 1 (lower is better) Translates to: SQHHIQQPDCSSRWA*LSYLLVSPWLLPCF Trigger: AAAGCAAGGAAGCAGCCAGGGTGATACAAGGAGATATGAAAGCCATGCCCACCTGGATGAGCAGTCTGGCTGTTGTATGTGGTGTTGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016279.11 ENSMUST00000202031.4 |
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| 3UTR CCA 90 bp | TTACTGTCTCAACACCACATACAACAGCCAGACTGCTCATCCAGGTaGGCATGGCTTTCATATCTCCTTGTATCACCCTGGCTGCTTCCT | + |
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Preference number: 1 (lower is better) Translates to: LLSQHHIQQPDCSSR*AWLSYLLVSPWLLP Trigger: AGGAAGCAGCCAGGGTGATACAAGGAGATATGAAAGCCATGCCCACCTGGATGAGCAGTCTGGCTGTTGTATGTGGTGTTGAGACAGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016279.11 ENSMUST00000202031.4 |
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| 3UTR GCA 90 bp | TTCGCTGTTCCTGCCCTGGTTTCTGTTCGCTCTGCTCGGCTTTTCTaGATGAAGGACACTGTGAAAGGTAACATTGTGTTCATACCGTTC | + |
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Preference number: 1 (lower is better) Translates to: FAVPALVSVRSARLF*MKDTVKGNIVFIPF Trigger: GAACGGTATGAACACAATGTTACCTTTCACAGTGTCCTTCATGCAGAAAAGCCGAGCAGAGCGAACAGAAACCAGGGCAGGAACAGCGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202279.4 |
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| 3UTR GCA 90 bp | TGGCCCCTATCTTCAAGTATCTCACAGAAGGCAAAAGCAACCGTGTaGAAACCTAAGCGCAGTCACAGAGATGTAAACAGGAGCCAAGAC | + |
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Preference number: 1 (lower is better) Translates to: WPLSSSISQKAKATV*KPKRSHRDVNRSQD Trigger: GTCTTGGCTCCTGTTTACATCTCTGTGACTGCGCTTAGGTTTGCACACGGTTGCTTTTGCCTTCTGTGAGATACTTGAAGATAGGGGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200840.2 |
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| 3UTR CCA 90 bp | TCTTCTATTCTTCTCTCTCCTATTCCCTCCCTGGAAAACATGGTCTaGGAAGGTCTTGCTGTGACTTCCAGACTGGTTCTTACTTGCAAC | + |
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Preference number: 1 (lower is better) Translates to: SSILLSPIPSLENMV*EGLAVTSRLVLTCN Trigger: GTTGCAAGTAAGAACCAGTCTGGAAGTCACAGCAAGACCTTCCCAGACCATGTTTTCCAGGGAGGGAATAGGAGAGAGAAGAATAGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000200840.2 ENSMUST00000201319.2 |
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| 3UTR TCA 90 bp | ATTATTTACACCGTTAGACTACAAGCTAGAGGGAGGAGTTTGTCCTaGCACTGCTGTCTACAGGGTTTGACTATAATGGTACTGATTCTT | + |
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Preference number: 1 (lower is better) Translates to: IIYTVRLQARGRSLS*HCCLQGLTIMVLIL Trigger: AAGAATCAGTACCATTATAGTCAAACCCTGTAGACAGCAGTGTCAGGACAAACTCCTCCCTCTAGCTTGTAGTCTAACGGTGTAAATAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016279.11 ENSMUST00000202031.4 |
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| 3UTR CCA 90 bp | GGATCCAGTAAGGACATAATAACCGTACAGTGTCTCCGTTCTACATaGTGTTATTTAAGGCAATCTTCTATTCTTCTCTCTCCTATTCCC | + |
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Preference number: 1 (lower is better) Translates to: GSSKDIITVQCLRST*CYLRQSSILLSPIP Trigger: GGGAATAGGAGAGAGAAGAATAGAAGATTGCCTTAAATAACACCATGTAGAACGGAGACACTGTACGGTTATTATGTCCTTACTGGATCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000200840.2 ENSMUST00000201319.2 |
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| 3UTR-3UTR TCA 90 bp | CTGCCTCCCTCACCTCTCCAGCTCTGTGGAGAGGCTGGATCTGTCAGAGACAGTCTGGAGAAAGACCCTTaGCTCCTCAGCAGGTCCCCA | + |
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Preference number: 2 (lower is better) Translates to: LPPSPLQLCGEAGSVRDSLEKDP*LLSRSP Trigger: TGGGGACCTGCTGAGGAGTCAAGGGTCTTTCTCCAG...ACTGTCTCTGACAGATCCAGCCTCTCCACAGAGCTGGAGAGGTGAGGGAGGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016279.11 ENSMUST00000202031.4 |
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| 3UTR-3UTR GCA 90 bp | CGGAGCCACTGGACGGTTCGCTGTTCCTGCCCTGGTTTCTGTTCGCTCTGCTCGTCTCTAGGAAAATTCTaGAGTAGCTGTGCCCGGGCC | + |
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Preference number: 2 (lower is better) Translates to: RSHWTVRCSCPGFCSLCSSLGKF*SSCARA Trigger: GGCCCGGGCACAGCTACTGCAGAATTTTCCTAGAGA...CGAGCAGAGCGAACAGAAACCAGGGCAGGAACAGCGAACCGTCCAGTGGCTCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202279.4 |
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| 3UTR-3UTR CCA 90 bp | GGGCCATTAATATCCTTGGTGGTGGCCACCCCTTCTGTAGCCCTCGTTGGAGTATGCAGCTGTCTGTCCTaGGTCCCATTCCTCGGAGCT | + |
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Preference number: 2 (lower is better) Translates to: GPLISLVVATPSVALVGVCSCLS*VPFLGA Trigger: AGCTCCGAGGAATGGGACCCAGGACAGACAGCTGCA...TACTCCAACGAGGGCTACAGAAGGGGTGGCCACCACCAAGGATATTAATGGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202279.4 |
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| 3UTR-3UTR TCA 90 bp | GGGCATGGCTTTCATATCTCCTTGTATCACCCTGGCTGCTTCCTTGCTTTGCACCTGGAGAAAGACCCTTaGCTCCTCAGCAGGTCCCCA | + |
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Preference number: 2 (lower is better) Translates to: GHGFHISLYHPGCFLALHLEKDP*LLSRSP Trigger: TGGGGACCTGCTGAGGAGTCAAGGGTCTTTCTCCAG...GTGCAAAGCAAGGAAGCAGCCAGGGTGATACAAGGAGATATGAAAGCCATGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016279.11 ENSMUST00000202031.4 |
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| 3UTR-3UTR GCA 90 bp | AGGTGGGCATGGCTTTCATATCTCCTTGTATCACCCTGGCTGCTTCCTTGCTTTCACCAAGCTGCTTCCTaGCTCTGCCTCCCTCACCTC | + |
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Preference number: 2 (lower is better) Translates to: RWAWLSYLLVSPWLLPCFHQAAS*LCLPHL Trigger: GAGGTGAGGGAGGCAGAGGCAGGAAGCAGCTTGGTG...AAAGCAAGGAAGCAGCCAGGGTGATACAAGGAGATATGAAAGCCATGCCCACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016279.11 ENSMUST00000202031.4 |
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| 3UTR-3UTR CCA 90 bp | TCCTCTGGTCACAGCCAATGCCTCTGTAACTCCGAGGGCTTGTCCTGCCAATCAATGGTTTGCCTCCTCTaGTCACAGCCAATGCCTCTG | + |
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Preference number: 2 (lower is better) Translates to: SSGHSQCLCNSEGLSCQSMVCLL*SQPMPL Trigger: CAGAGGCATTGGCTGTGACCAGAGGAGGCAAACCAT...TGATTGGCAGGACAAGCCCTCGGAGTTACAGAGGCATTGGCTGTGACCAGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000200840.2 ENSMUST00000201319.2 |
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| 3UTR-3UTR CCA 90 bp | GAGCCACTGGACGGTTCGCTGTTCCTGCCCTGGTTTCTGTTCGCTCTGCTCGGCTCTTTTGGGACCCCATaGATGTTTCTTCTTGCTAAC | + |
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Preference number: 2 (lower is better) Translates to: EPLDGSLFLPWFLFALLGSFGTP*MFLLAN Trigger: GTTAGCAAGAAGAAACATCCATGGGGTCCCAAAAGA...GCCGAGCAGAGCGAACAGAAACCAGGGCAGGAACAGCGAACCGTCCAGTGGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000202279.4 |
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| 3UTR-3UTR TCA 90 bp | GGGCATGGCTTTCATATCTCCTTGTATCACCCTGGCTGCTTCCTTGCTTTGCACGGGAGGAGTTTGTCCTaGCACTGCTGTCTACAGGGT | + |
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Preference number: 2 (lower is better) Translates to: GHGFHISLYHPGCFLALHGRSLS*HCCLQG Trigger: ACCCTGTAGACAGCAGTGTCAGGACAAACTCCTCCC...GTGCAAAGCAAGGAAGCAGCCAGGGTGATACAAGGAGATATGAAAGCCATGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016279.11 ENSMUST00000202031.4 |
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| 3UTR-3UTR GCA 90 bp | GAGGCCATTAGCTCTCCGGTTGGGGAGCTCTGTGTAGGTGTTCCAGTAGCCGGATCTGCTCGGCTTTTCTaGATGAAGGACACTGTGAAA | + |
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Preference number: 2 (lower is better) Translates to: EAISSPVGELCVGVPVAGSARLF*MKDTVK Trigger: TTTCACAGTGTCCTTCATGCAGAAAAGCCGAGCAGA...TCCGGCTACTGGAACACCTACACAGAGCTCCCCAACCGGAGAGCTAATGGCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000202279.4 |
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| 3UTR-3UTR CCA 90 bp | CTGCCTCCCTCACCTCTCCAGCTCTGTGGAGAGGCTGGATCTGTCAGAGACAGTCTGGACTTAGAGCTCTaGCTAACCCTGAACAAAGAA | + |
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Preference number: 2 (lower is better) Translates to: LPPSPLQLCGEAGSVRDSLDLEL*LTLNKE Trigger: TTCTTTGTTCAGGGTTAGCCAGAGCTCTAAGTCCAG...ACTGTCTCTGACAGATCCAGCCTCTCCACAGAGCTGGAGAGGTGAGGGAGGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016279.11 ENSMUST00000202031.4 |
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| 3UTR-3UTR GCA 90 bp | GGGCATGGCTTTCATATCTCCTTGTATCACCCTGGCTGCTTCCTTGCTTTGCACTCTCTAGGAAAATTCTaGAGTAGCTGTGCCCGGGCC | + |
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Preference number: 2 (lower is better) Translates to: GHGFHISLYHPGCFLALHSLGKF*SSCARA Trigger: GGCCCGGGCACAGCTACTGCAGAATTTTCCTAGAGA...GTGCAAAGCAAGGAAGCAGCCAGGGTGATACAAGGAGATATGAAAGCCATGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016279.11 ENSMUST00000202031.4 |
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| 3UTR-3UTR GCA 90 bp | GGGCCATTAATATCCTTGGTGGTGGCCACCCCTTCTGTAGCCCTCGTTGGAGTACTCAAGAGCCATGACTaGATAGGGCTTCATTTCCCA | + |
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Preference number: 2 (lower is better) Translates to: GPLISLVVATPSVALVGVLKSHD*IGLHFP Trigger: TGGGAAATGAAGCCCTATGCAGTCATGGCTCTTGAG...TACTCCAACGAGGGCTACAGAAGGGGTGGCCACCACCAAGGATATTAATGGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202279.4 |
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| 3UTR-3UTR GCA 90 bp | GGGCCATTAATATCCTTGGTGGTGGCCACCCCTTCTGTAGCCCTCGTTGGAGTAGGTTTCTGTTCGCTCTaGTCGGCTTTTCTGCATGAA | + |
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Preference number: 2 (lower is better) Translates to: GPLISLVVATPSVALVGVGFCSL*SAFLHE Trigger: TTCATGCAGAAAAGCCGAGCAGAGCGAACAGAAACC...TACTCCAACGAGGGCTACAGAAGGGGTGGCCACCACCAAGGATATTAATGGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000202279.4 |
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| 3UTR-3UTR TCA 90 bp | TGGGCATGGCTTTCATATCTCCTTGTATCACCCTGGCTGCTTCCTTGCTTTGCATCAGTGCCATTAAAGTaGCGGCTCAGGTCTCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: WAWLSYLLVSPWLLPCFASVPLK*RLRSLE Trigger: CTCCAGAGACCTGAGCCGTCACTTTAATGGCACTGA...TGCAAAGCAAGGAAGCAGCCAGGGTGATACAAGGAGATATGAAAGCCATGCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016279.11 ENSMUST00000202031.4 |
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| 3UTR-3UTR TCA 90 bp | AGGTGGGCATGGCTTTCATATCTCCTTGTATCACCCTGGCTGCTTCCTTGCTTTTCAGTGCCATTAAAGTaGCGGCTCAGGTCTCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: RWAWLSYLLVSPWLLPCFSVPLK*RLRSLE Trigger: CTCCAGAGACCTGAGCCGTCACTTTAATGGCACTGA...AAAGCAAGGAAGCAGCCAGGGTGATACAAGGAGATATGAAAGCCATGCCCACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016279.11 ENSMUST00000202031.4 |
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| 3UTR-3UTR GCA 90 bp | AGGTGGGCATGGCTTTCATATCTCCTTGTATCACCCTGGCTGCTTCCTTGCTTTTCTCTAGGAAAATTCTaGAGTAGCTGTGCCCGGGCC | + |
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Preference number: 2 (lower is better) Translates to: RWAWLSYLLVSPWLLPCFSLGKF*SSCARA Trigger: GGCCCGGGCACAGCTACTGCAGAATTTTCCTAGAGA...AAAGCAAGGAAGCAGCCAGGGTGATACAAGGAGATATGAAAGCCATGCCCACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016279.11 ENSMUST00000202031.4 |
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| 3UTR-3UTR GCA 90 bp | GAGGAGTTTGTCCTGACACTGCTGTCTACAGGGTTTGACTATAATGGTACTGATGCAATGGCACCAAGCTaGTTCCTGCCTCTGCCTCCC | + |
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Preference number: 2 (lower is better) Translates to: EEFVLTLLSTGFDYNGTDAMAPS*FLPLPP Trigger: GGGAGGCAGAGGCAGGAAGCAGCTTGGTGCCATTGC...ATCAGTACCATTATAGTCAAACCCTGTAGACAGCAGTGTCAGGACAAACTCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016279.11 ENSMUST00000202031.4 |
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| 3UTR-3UTR CCA 90 bp | CCTCACCTCTCCAGCTCTGTGGAGAGGCTGGATCTGTCAGAGACAGTAGTACTGATCCAATTCTTTCCCTaGAGAAAGACCCTTGACTCC | + |
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Preference number: 2 (lower is better) Translates to: PHLSSSVERLDLSETVVLIQFFP*RKTLDS Trigger: GGAGTCAAGGGTCTTTCTCCAGGGAAAGAATTGGAT...CAGTACTACTGTCTCTGACAGATCCAGCCTCTCCACAGAGCTGGAGAGGTGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016279.11 ENSMUST00000202031.4 |
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| 3UTR-3UTR CCA 90 bp | GAGGCCATTAGCTCTCCGGTTGGGGAGCTCTGTGTAGGTGTTCCAGTAGCCGGACTGAGGTATGAAATGTaGATAAAGGAGATGTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: EAISSPVGELCVGVPVAGLRYEM*IKEMCV Trigger: CACACACATCTCCTTTATCCACATTTCATACCTCAG...TCCGGCTACTGGAACACCTACACAGAGCTCCCCAACCGGAGAGCTAATGGCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202279.4 |
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| 3UTR-3UTR TCA 90 bp | CAGCTGTCTGTCCTGGGTCCCATTCCTCGGAGCTCTGATCTCTGTAAGGACCCAGTTCTTGCTGAGGTATaGAATGTGGATAAAGGAGAT | + |
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Preference number: 2 (lower is better) Translates to: QLSVLGPIPRSSDLCKDPVLAEV*NVDKGD Trigger: ATCTCCTTTATCCACATTTCATACCTCAGCAAGAAC...TGGGTCCTTACAGAGATCAGAGCTCCGAGGAATGGGACCCAGGACAGACAGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202279.4 |
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| 3UTR-3UTR TCA 90 bp | GGAGTAGAGGCCATTAGCTCTCCGGTTGGGGAGCTCTGTGTAGGTGTTCCAGTACTTCTTGCTAACTCTTaGACGTTGAATTTCCAGCGA | + |
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Preference number: 2 (lower is better) Translates to: GVEAISSPVGELCVGVPVLLANS*TLNFQR Trigger: TCGCTGGAAATTCAACGTTCAAGAGTTAGCAAGAAG...TACTGGAACACCTACACAGAGCTCCCCAACCGGAGAGCTAATGGCCTCTACTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202279.4 |
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| 3UTR-3UTR GCA 90 bp | GGAGTAGAGGCCATTAGCTCTCCGGTTGGGGAGCTCTGTGTAGGTGTTCCAGTATATGCCATTCCTCATTaGTTTCCTTGCTCTTCTCTG | + |
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Preference number: 2 (lower is better) Translates to: GVEAISSPVGELCVGVPVYAIPH*FPCSSL Trigger: CAGAGAAGAGCAAGGAAAGCAATGAGGAATGGCATA...TACTGGAACACCTACACAGAGCTCCCCAACCGGAGAGCTAATGGCCTCTACTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202279.4 |
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| 3UTR-3UTR CCA 90 bp | TGGGCATGGCTTTCATATCTCCTTGTATCACCCTGGCTGCTTCCTTGCTTTGCAGACGGCTCAGGTCTCTaGAGGCAGATAGATCATCAA | + |
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Preference number: 2 (lower is better) Translates to: WAWLSYLLVSPWLLPCFADGSGL*RQIDHQ Trigger: TTGATGATCTATCTGCCTCCAGAGACCTGAGCCGTC...TGCAAAGCAAGGAAGCAGCCAGGGTGATACAAGGAGATATGAAAGCCATGCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016279.11 ENSMUST00000202031.4 |
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| 3UTR-3UTR CCA 90 bp | CTGCGGAACTTTATATATAAACCCACAGCCCACCGGGAGGCATGCCAAGGCTTAAAAATCCTGGTGCCATaGAAATCAGCATGTGACCGC | + |
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Preference number: 2 (lower is better) Translates to: LRNFIYKPTAHREACQGLKILVP*KSACDR Trigger: GCGGTCACATGCTGATTTCCATGGCACCAGGATTTT...TAAGCCTTGGCATGCCTCCCGGTGGGCTGTGGGTTTATATATAAAGTTCCGCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000200840.2 ENSMUST00000201319.2 |
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| 3UTR-3UTR GCA 90 bp | AACTTTATATATAAACCCACAGCCCACCGGGAGGCATGCCAAGGCTTACATTGCGCAAAAGCAACCGTGTaGAAACCTAAGCGCAGTCAC | + |
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Preference number: 2 (lower is better) Translates to: NFIYKPTAHREACQGLHCAKATV*KPKRSH Trigger: GTGACTGCGCTTAGGTTTGCACACGGTTGCTTTTGC...GCAATGTAAGCCTTGGCATGCCTCCCGGTGGGCTGTGGGTTTATATATAAAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200840.2 |
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| 3UTR-3UTR CCA 90 bp | GGGCATGGCTTTCATATCTCCTTGTATCACCCTGGCTGCTTCCTTGCTTTGCACCTGGACTTAGAGCTCTaGCTAACCCTGAACAAAGAA | + |
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Preference number: 2 (lower is better) Translates to: GHGFHISLYHPGCFLALHLDLEL*LTLNKE Trigger: TTCTTTGTTCAGGGTTAGCCAGAGCTCTAAGTCCAG...GTGCAAAGCAAGGAAGCAGCCAGGGTGATACAAGGAGATATGAAAGCCATGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016279.11 ENSMUST00000202031.4 |
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| 3UTR-3UTR CCA 90 bp | TTCTTTCCCTGGAGAAAGACCCTTGACTCCTCAGCAGGTCCCCAGCATCAGACCCTGTTCAGAAACTTCTaGGCTCAACTATTTACACTG | + |
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Preference number: 2 (lower is better) Translates to: FFPWRKTLDSSAGPQHQTLFRNF*AQLFTL Trigger: CAGTGTAAATAGTTGAGCCCAGAAGTTTCTGAACAG...GGTCTGATGCTGGGGACCTGCTGAGGAGTCAAGGGTCTTTCTCCAGGGAAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016279.11 ENSMUST00000202031.4 |
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| 3UTR-3UTR CCA 90 bp | TGCTGTGACTTCCAGACTGGTTCTTACTTGCAACCCACCCTGCGGAACTTTATACTCCTATTCCCTCCCTaGAAAACATGGTCTGGGAAG | + |
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Preference number: 2 (lower is better) Translates to: CCDFQTGSYLQPTLRNFILLFPP*KTWSGK Trigger: CTTCCCAGACCATGTTTTCCAGGGAGGGAATAGGAG...TATAAAGTTCCGCAGGGTGGGTTGCAAGTAAGAACCAGTCTGGAAGTCACAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000200840.2 ENSMUST00000201319.2 |
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| 3UTR-3UTR CCA 90 bp | ACTTTATATATAAACCCACAGCCCACCGGGAGGCATGCCAAGGCTTACATTGCCAAGCAAGCACACAGGTaGCAAGTGACTGCTTCTATC | + |
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Preference number: 2 (lower is better) Translates to: TLYINPQPTGRHAKAYIAKQAHR*QVTASI Trigger: GATAGAAGCAGTCACTTGCCACCTGTGTGCTTGCTT...GGCAATGTAAGCCTTGGCATGCCTCCCGGTGGGCTGTGGGTTTATATATAAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200840.2 |
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| 3UTR-3UTR CCA 90 bp | TGGGCATGGCTTTCATATCTCCTTGTATCACCCTGGCTGCTTCCTTGCTTTGCACTGTTCAGAAACTTCTaGGCTCAACTATTTACACTG | + |
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Preference number: 2 (lower is better) Translates to: WAWLSYLLVSPWLLPCFALFRNF*AQLFTL Trigger: CAGTGTAAATAGTTGAGCCCAGAAGTTTCTGAACAG...TGCAAAGCAAGGAAGCAGCCAGGGTGATACAAGGAGATATGAAAGCCATGCCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016279.11 ENSMUST00000202031.4 |
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| 3UTR-3UTR TCA 90 bp | GTGTCTCCGTTCTACATGGTGTTATTTAAGGCAATCTTCTATTCTTCTCTCTCCCACACAGGTGGCAAGTaGCTGCTTCTATCGACTAGT | + |
|
Preference number: 2 (lower is better) Translates to: VSPFYMVLFKAIFYSSLSHTGGK*LLLSTS Trigger: ACTAGTCGATAGAAGCAGTCACTTGCCACCTGTGTG...GGAGAGAGAAGAATAGAAGATTGCCTTAAATAACACCATGTAGAACGGAGACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200840.2 |
||
| 3UTR-3UTR GCA 90 bp | TGCTGTGACTTCCAGACTGGTTCTTACTTGCAACCCACCCTGCGGAACTTTATATTGTCCGATGTCTTCTaGTTAGTCAAATGTCAAGCA | + |
|
Preference number: 2 (lower is better) Translates to: CCDFQTGSYLQPTLRNFILSDVF*LVKCQA Trigger: TGCTTGACATTTGACTAAGCAGAAGACATCGGACAA...TATAAAGTTCCGCAGGGTGGGTTGCAAGTAAGAACCAGTCTGGAAGTCACAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000200840.2 ENSMUST00000201319.2 |
||
| 3UTR-3UTR GCA 90 bp | TGCTGTGACTTCCAGACTGGTTCTTACTTGCAACCCACCCTGCGGAACTTTATAACTTGCAACCCACCCTaGGGAACTTTATATATAAAC | + |
|
Preference number: 2 (lower is better) Translates to: CCDFQTGSYLQPTLRNFITCNPP*GTLYIN Trigger: GTTTATATATAAAGTTCCGCAGGGTGGGTTGCAAGT...TATAAAGTTCCGCAGGGTGGGTTGCAAGTAAGAACCAGTCTGGAAGTCACAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000200840.2 ENSMUST00000201319.2 |
||
| 3UTR-3UTR CCA 90 bp | CGGAACTTTATATATAAACCCACAGCCCACCGGGAGGCATGCCAAGGCTTACATTGTCTCCGTTCTACATaGTGTTATTTAAGGCAATCT | + |
|
Preference number: 2 (lower is better) Translates to: RNFIYKPTAHREACQGLHCLRST*CYLRQS Trigger: AGATTGCCTTAAATAACACCATGTAGAACGGAGACA...ATGTAAGCCTTGGCATGCCTCCCGGTGGGCTGTGGGTTTATATATAAAGTTCCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000200840.2 ENSMUST00000201319.2 |
||
| 3UTR-3UTR CCA 90 bp | ACAGTGTCTCCGTTCTACATGGTGTTATTTAAGGCAATCTTCTATTCTTCTCTCAAAATCCTGGTGCCATaGAAATCAGCATGTGACCGC | + |
|
Preference number: 2 (lower is better) Translates to: TVSPFYMVLFKAIFYSSLKILVP*KSACDR Trigger: GCGGTCACATGCTGATTTCCATGGCACCAGGATTTT...GAGAGAAGAATAGAAGATTGCCTTAAATAACACCATGTAGAACGGAGACACTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000200840.2 ENSMUST00000201319.2 |
||
| 3UTR-3UTR GCA 90 bp | GTGTCTCCGTTCTACATGGTGTTATTTAAGGCAATCTTCTATTCTTCTCTCTCCTTGTCCGATGTCTTCTaGTTAGTCAAATGTCAAGCA | + |
|
Preference number: 2 (lower is better) Translates to: VSPFYMVLFKAIFYSSLSLSDVF*LVKCQA Trigger: TGCTTGACATTTGACTAAGCAGAAGACATCGGACAA...GGAGAGAGAAGAATAGAAGATTGCCTTAAATAACACCATGTAGAACGGAGACAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000200840.2 ENSMUST00000201319.2 |
||
| 3UTR-3UTR GCA 90 bp | GTGTCTCCGTTCTACATGGTGTTATTTAAGGCAATCTTCTATTCTTCTCTCTCCACTTGCAACCCACCCTaGGGAACTTTATATATAAAC | + |
|
Preference number: 2 (lower is better) Translates to: VSPFYMVLFKAIFYSSLSTCNPP*GTLYIN Trigger: GTTTATATATAAAGTTCCGCAGGGTGGGTTGCAAGT...GGAGAGAGAAGAATAGAAGATTGCCTTAAATAACACCATGTAGAACGGAGACAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000200840.2 ENSMUST00000201319.2 |
||
| 3UTR-3UTR CCA 90 bp | GACTTCCAGACTGGTTCTTACTTGCAACCCACCCTGCGGAACTTTATATATAAATGTCTCCGTTCTACATaGTGTTATTTAAGGCAATCT | + |
|
Preference number: 2 (lower is better) Translates to: DFQTGSYLQPTLRNFIYKCLRST*CYLRQS Trigger: AGATTGCCTTAAATAACACCATGTAGAACGGAGACA...TTTATATATAAAGTTCCGCAGGGTGGGTTGCAAGTAAGAACCAGTCTGGAAGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000200840.2 ENSMUST00000201319.2 |
||
| 3UTR CCA 72 bp | GGAGCTCTGTGTAGGTGTTCCAGTAGCCGGAGCCACTaGACGGTTCGCTGTTCCTGCCCTGGTTTCTGTTCG | + |
|
Preference number: 3 (lower is better) Translates to: GALCRCSSSRSH*TVRCSCPGFCS Trigger: CGAACAGAAACCAGGGCAGGAACAGCGAACCGTCCAGTGGCTCCGGCTACTGGAACACCTACACAGAGCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202279.4 |
||
| 3UTR CCA 72 bp | AGGTCTCTGGAGGCAGATAGATCATCAAAGCGGCAATaGCACCAAGCTGCTTCCTGCCTCTGCCTCCCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: RSLEADRSSKRQ*HQAASCLCLPH Trigger: GTGAGGGAGGCAGAGGCAGGAAGCAGCTTGGTGCCATTGCCGCTTTGATGATCTATCTGCCTCCAGAGACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016279.11 ENSMUST00000202031.4 |
||
| 3UTR CCA 72 bp | GCTTACATTGCCCCTTACAGTAGGGGGCCGAGTCCATaGTTTGCCTCCTCTGGTCACAGCCAATGCCTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: AYIAPYSRGPSP*FASSGHSQCLC Trigger: ACAGAGGCATTGGCTGTGACCAGAGGAGGCAAACCATGGACTCGGCCCCCTACTGTAAGGGGCAATGTAAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000200840.2 ENSMUST00000201319.2 |
||
| 3UTR-3UTR CAA 90 bp | GGTTTGCCTCCTCTGGTCACAGCCAATGCCTCTGTAACTCCGAGGGCTTGTCCTAGTGAGTGGCAGAGCTaGGCTAGGAAGCCATACTTG | + |
|
Preference number: 3 (lower is better) Translates to: GLPPLVTANASVTPRACPSEWQS*ARKPYL Trigger: CAAGTATGGCTTCCTAGCCAAGCTCTGCCACTCACT...AGGACAAGCCCTCGGAGTTACAGAGGCATTGGCTGTGACCAGAGGAGGCAAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000200840.2 ENSMUST00000201319.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCTGCGGAACTTTATATATAAACCCACAGCCCACCGGGAGGCATGCCAAGGCTAGTGAGTGGCAGAGCTaGGCTAGGAAGCCATACTTG | + |
|
Preference number: 3 (lower is better) Translates to: PCGTLYINPQPTGRHAKASEWQS*ARKPYL Trigger: CAAGTATGGCTTCCTAGCCAAGCTCTGCCACTCACT...AGCCTTGGCATGCCTCCCGGTGGGCTGTGGGTTTATATATAAAGTTCCGCAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000200840.2 ENSMUST00000201319.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGCCACTGGACGGTTCGCTGTTCCTGCCCTGGTTTCTGTTCGCTCTGCTCGGCATATGCCATTCCTCATaGCTTTCCTTGCTCTTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: EPLDGSLFLPWFLFALLGICHSS*LSLLFS Trigger: AGAGAAGAGCAAGGAAAGCAATGAGGAATGGCATAT...GCCGAGCAGAGCGAACAGAAACCAGGGCAGGAACAGCGAACCGTCCAGTGGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202279.4 |
||
| 3UTR GCA 72 bp | ACGGTTCGCTGTTCCTGCCCTGGTTTCTGTTCGCTCTaGTCGGCTTTTCTGCATGAAGGACACTGTGAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: TVRCSCPGFCSL*SAFLHEGHCER Trigger: CCTTTCACAGTGTCCTTCATGCAGAAAAGCCGAGCAGAGCGAACAGAAACCAGGGCAGGAACAGCGAACCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202279.4 |
||
| 3UTR TCA 72 bp | CCTCCCTGGAAAACATGGTCTGGGAAGGTCTTGCTGTaGCTTCCAGACTGGTTCTTACTTGCAACCCACCCT | + |
|
Preference number: 3 (lower is better) Translates to: PPWKTWSGKVLL*LPDWFLLATHP Trigger: AGGGTGGGTTGCAAGTAAGAACCAGTCTGGAAGTCACAGCAAGACCTTCCCAGACCATGTTTTCCAGGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000200840.2 ENSMUST00000201319.2 |
||
| 3UTR TCA 72 bp | TCTGATGAGAAGGGAAGCAAGCACACAGGTGGCAAGTaGCTGCTTCTATCGACTAGTGTGTGCCCGATAACG | + |
|
Preference number: 3 (lower is better) Translates to: SDEKGSKHTGGK*LLLSTSVCPIT Trigger: CGTTATCGGGCACACACTAGTCGATAGAAGCAGTCACTTGCCACCTGTGTGCTTGCTTCCCTTCTCATCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200840.2 |
||
| 3UTR GCA 72 bp | GTGACTTCCAGACTGGTTCTTACTTGCAACCCACCCTaGGGAACTTTATATATAAACCCACAGCCCACCGGG | + |
|
Preference number: 3 (lower is better) Translates to: VTSRLVLTCNPP*GTLYINPQPTG Trigger: CCCGGTGGGCTGTGGGTTTATATATAAAGTTCCGCAGGGTGGGTTGCAAGTAAGAACCAGTCTGGAAGTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000200840.2 ENSMUST00000201319.2 |
||
| 3UTR CCA 72 bp | CAACACCACATACAACAGCCAGACTGCTCATCCAGGTaGGCATGGCTTTCATATCTCCTTGTATCACCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: QHHIQQPDCSSR*AWLSYLLVSPW Trigger: CCAGGGTGATACAAGGAGATATGAAAGCCATGCCCACCTGGATGAGCAGTCTGGCTGTTGTATGTGGTGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016279.11 ENSMUST00000202031.4 |
||
| 3UTR TCA 72 bp | GGTCCCCAGCATCAGACCATGAGTACGGACGCACGCTaGCGTCACTTGTTGGAGATAATAAATAGAATGACC | + |
|
Preference number: 3 (lower is better) Translates to: GPQHQTMSTDAR*RHLLEIINRMT Trigger: GGTCATTCTATTTATTATCTCCAACAAGTGACGTCAGCGTGCGTCCGTACTCATGGTCTGATGCTGGGGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016279.11 ENSMUST00000202031.4 |
||
| 3UTR TCA 72 bp | TTTGGGACCCCATGGATGTTTCTTCTTGCTAACTCTTaGACGTTGAATTTCCAGCGAGTGTCGGGTTCCCGG | + |
|
Preference number: 3 (lower is better) Translates to: FGTPWMFLLANS*TLNFQRVSGSR Trigger: CCGGGAACCCGACACTCGCTGGAAATTCAACGTTCAAGAGTTAGCAAGAAGAAACATCCATGGGGTCCCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202279.4 |
||
| 3UTR GCA 72 bp | CCTGCCCTGGTTTCTGTTCGCTCTGCTCGGCTTTTCTaGATGAAGGACACTGTGAAAGGTAACATTGTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: PALVSVRSARLF*MKDTVKGNIVF Trigger: GAACACAATGTTACCTTTCACAGTGTCCTTCATGCAGAAAAGCCGAGCAGAGCGAACAGAAACCAGGGCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202279.4 |
||
| 3UTR CCA 72 bp | CTTCTCTCTCCTATTCCCTCCCTGGAAAACATGGTCTaGGAAGGTCTTGCTGTGACTTCCAGACTGGTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: LLSPIPSLENMV*EGLAVTSRLVL Trigger: AAGAACCAGTCTGGAAGTCACAGCAAGACCTTCCCAGACCATGTTTTCCAGGGAGGGAATAGGAGAGAGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000200840.2 ENSMUST00000201319.2 |
||
| 3UTR CCA 72 bp | ATCAGTCACCTAACCAGTGACTACATCTCCAGTGAGTaGCAGAGCTTGGCTAGGAAGCCATACTTGACTCTT | + |
|
Preference number: 3 (lower is better) Translates to: ISHLTSDYISSE*QSLARKPYLTL Trigger: AAGAGTCAAGTATGGCTTCCTAGCCAAGCTCTGCCACTCACTGGAGATGTAGTCACTGGTTAGGTGACTGAT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000200840.2 ENSMUST00000201319.2 |
||
| 3UTR GCA 72 bp | AGTTTACTGTCTCAACACCACATACAACAGCCAGACTaGTCATCCAGGTGGGCATGGCTTTCATATCTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: SLLSQHHIQQPD*SSRWAWLSYLL Trigger: AAGGAGATATGAAAGCCATGCCCACCTGGATGAGCAGTCTGGCTGTTGTATGTGGTGTTGAGACAGTAAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016279.11 ENSMUST00000202031.4 |
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| 3UTR TCA 72 bp | ACCGTTAGACTACAAGCTAGAGGGAGGAGTTTGTCCTaGCACTGCTGTCTACAGGGTTTGACTATAATGGTA | + |
|
Preference number: 3 (lower is better) Translates to: TVRLQARGRSLS*HCCLQGLTIMV Trigger: TACCATTATAGTCAAACCCTGTAGACAGCAGTGTCAGGACAAACTCCTCCCTCTAGCTTGTAGTCTAACGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016279.11 ENSMUST00000202031.4 |
||
| 3UTR TCA 72 bp | AAGGACCCATCTGAGCAACTAGTTCTTGCTGAGGTATaGAATGTGGATAAAGGAGATGTGTGTGAGCTACCC | + |
|
Preference number: 3 (lower is better) Translates to: KDPSEQLVLAEV*NVDKGDVCELP Trigger: GGGTAGCTCACACACATCTCCTTTATCCACATTTCATACCTCAGCAAGAACTAGTTGCTCAGATGGGTCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202279.4 |
||
| 3UTR GCA 72 bp | AATCACCTCTTAGTAGTCACAGAGAGGCGTCATGGTTaGTTAAGACAGCAGCTAGCTAGTGATGAGGTAGAT | + |
|
Preference number: 3 (lower is better) Translates to: NHLLVVTERRHG*LRQQLASDEVD Trigger: ATCTACCTCATCACTAGCTAGCTGCTGTCTTAAGCAACCATGACGCCTCTCTGTGACTACTAAGAGGTGATT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000200840.2 ENSMUST00000201319.2 |
||
| 3UTR GCA 72 bp | TCTTCAAGTATCTCACAGAAGGCAAAAGCAACCGTGTaGAAACCTAAGCGCAGTCACAGAGATGTAAACAGG | + |
|
Preference number: 3 (lower is better) Translates to: SSSISQKAKATV*KPKRSHRDVNR Trigger: CCTGTTTACATCTCTGTGACTGCGCTTAGGTTTGCACACGGTTGCTTTTGCCTTCTGTGAGATACTTGAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200840.2 |
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| 3UTR CCA 72 bp | AAGGACATAATAACCGTACAGTGTCTCCGTTCTACATaGTGTTATTTAAGGCAATCTTCTATTCTTCTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: KDIITVQCLRST*CYLRQSSILLS Trigger: AGAGAGAAGAATAGAAGATTGCCTTAAATAACACCATGTAGAACGGAGACACTGTACGGTTATTATGTCCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000200840.2 ENSMUST00000201319.2 |
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| CDS-3UTR CCA 90 bp | CTGCCTCCCTCACCTCTCCAGCTCTGTGGAGAGGCTGGATCTGTCAGAGACAGTGCTGTCTGGCCAGCGTaGTTTTTCCCGAGCCCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LPPSPLQLCGEAGSVRDSAVWPA*FFPSPG Trigger: TCCCGGGCTCGGGAAAAACCACGCTGGCCAGACAGC...ACTGTCTCTGACAGATCCAGCCTCTCCACAGAGCTGGAGAGGTGAGGGAGGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016279.11 |
||
| CDS-3UTR CCA 90 bp | GGTTTGCCTCCTCTGGTCACAGCCAATGCCTCTGTAACTCCGAGGGCTTGTCCTTGTTTCCTAAAGCTGTaGCGGCGCGGAGGTGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: GLPPLVTANASVTPRACPCFLKL*RRGGGP Trigger: GGGGCCACCTCCGCGCCGCCACAGCTTTAGGAAACA...AGGACAAGCCCTCGGAGTTACAGAGGCATTGGCTGTGACCAGAGGAGGCAAACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000200840.2 ENSMUST00000201319.2 |
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| CDS-3UTR GCA 90 bp | GCAACCGTGTGCAAACCTAAGCGCAGTCACAGAGATGTAAACAGGAGCCAAGACGGAGGCGGCTGCTGCTaGCGCTGTTGGAGGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ATVCKPKRSHRDVNRSQDGGGCC*RCWRLS Trigger: GCTGAGCCTCCAACAGCGGCAGCAGCAGCCGCCTCC...GTCTTGGCTCCTGTTTACATCTCTGTGACTGCGCTTAGGTTTGCACACGGTTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200840.2 |
||
| CDS-3UTR GCA 90 bp | CTTTCCTTGCTCTTCTCTGGTTCCACTCATGAGCTTCCTCCAAGAGGTTGGGGTGGAGGCGGCTGCTGCTaGCGCTGTTGGAGGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSLLFSGSTHELPPRGWGGGGCC*RCWRLS Trigger: GCTGAGCCTCCAACAGCGGCAGCAGCAGCCGCCTCC...ACCCCAACCTCTTGGAGGAAGCTCATGAGTGGAACCAGAGAAGAGCAAGGAAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202279.4 |
||
| CDS-3UTR CCA 90 bp | GGGCCATTAATATCCTTGGTGGTGGCCACCCCTTCTGTAGCCCTCGTTGGAGTATGTTTCCTAAAGCTGTaGCGGCGCGGAGGTGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: GPLISLVVATPSVALVGVCFLKL*RRGGGP Trigger: GGGGCCACCTCCGCGCCGCCACAGCTTTAGGAAACA...TACTCCAACGAGGGCTACAGAAGGGGTGGCCACCACCAAGGATATTAATGGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202279.4 |
||
| CDS-3UTR CCA 90 bp | GAGGCCATTAGCTCTCCGGTTGGGGAGCTCTGTGTAGGTGTTCCAGTAGCCGGAAATACCTGGCCAGCGTaGTTTTTCCCGAGCCCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: EAISSPVGELCVGVPVAGNTWPA*FFPSPG Trigger: TCCCGGGCTCGGGAAAAACCACGCTGGCCAGGTATT...TCCGGCTACTGGAACACCTACACAGAGCTCCCCAACCGGAGAGCTAATGGCCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000202279.4 |
||
| CDS-3UTR GCA 90 bp | ACTTTATATATAAACCCACAGCCCACCGGGAGGCATGCCAAGGCTTACATTGCCGGAGGCGGCTGCTGCTaGCGCTGTTGGAGGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TLYINPQPTGRHAKAYIAGGGCC*RCWRLS Trigger: GCTGAGCCTCCAACAGCGGCAGCAGCAGCCGCCTCC...GGCAATGTAAGCCTTGGCATGCCTCCCGGTGGGCTGTGGGTTTATATATAAAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000200840.2 ENSMUST00000201319.2 |
||
| CDS-3UTR GCA 90 bp | GAGGAGTTTGTCCTGACACTGCTGTCTACAGGGTTTGACTATAATGGTACTGATGGCCGAGGAGGCGGCTaGTGCTGCCGCTGTTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: EEFVLTLLSTGFDYNGTDGRGGG*CCRCWR Trigger: CCTCCAACAGCGGCAGCAGCAGCCGCCTCCTCGGCC...ATCAGTACCATTATAGTCAAACCCTGTAGACAGCAGTGTCAGGACAAACTCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016279.11 |
||
| CDS-3UTR GCA 90 bp | CCTCACCTCTCCAGCTCTGTGGAGAGGCTGGATCTGTCAGAGACAGTAGTACTGACGGTTCGCTGTTCCTaGCCTGGTTTCTGTTCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PHLSSSVERLDLSETVVLTVRCS*PGFCSL Trigger: GAGCGAACAGAAACCAGGGCAGGAACAGCGAACCGT...CAGTACTACTGTCTCTGACAGATCCAGCCTCTCCACAGAGCTGGAGAGGTGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016279.11 ENSMUST00000202031.4 |
||
| CDS-3UTR CCA 90 bp | AGGTGGGCATGGCTTTCATATCTCCTTGTATCACCCTGGCTGCTTCCTTGCTTTTGTTTCCTAAAGCTGTaGCGGCGCGGAGGTGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: RWAWLSYLLVSPWLLPCFCFLKL*RRGGGP Trigger: GGGGCCACCTCCGCGCCGCCACAGCTTTAGGAAACA...AAAGCAAGGAAGCAGCCAGGGTGATACAAGGAGATATGAAAGCCATGCCCACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016279.11 |
||
| CDS-3UTR TCA 90 bp | TTCTTTCCCTGGAGAAAGACCCTTGACTCCTCAGCAGGTCCCCAGCATCAGACCCTCTGGTTCCACTCATaGGCTTCCTCCAAGAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: FFPWRKTLDSSAGPQHQTLWFHS*ASSKRL Trigger: CAACCTCTTGGAGGAAGCTCATGAGTGGAACCAGAG...GGTCTGATGCTGGGGACCTGCTGAGGAGTCAAGGGTCTTTCTCCAGGGAAAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016279.11 |
||
| CDS-3UTR GCA 90 bp | AGATCATCAAAGCGGCAATGGCACCAAGCTGCTTCCTGCCTCTGCCTCCCTCACGGTTTCTGTTCGCTCTaGTCGGCTTTTCTGCATGAA | + |
|
Preference number: 4 (lower is better) Translates to: RSSKRQWHQAASCLCLPHGFCSL*SAFLHE Trigger: TTCATGCAGAAAAGCCGAGCAGAGCGAACAGAAACC...GTGAGGGAGGCAGAGGCAGGAAGCAGCTTGGTGCCATTGCCGCTTTGATGATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016279.11 ENSMUST00000202031.4 |
||
| CDS-3UTR TCA 90 bp | CCTCACCTCTCCAGCTCTGTGGAGAGGCTGGATCTGTCAGAGACAGTAGTACTGCTAACTCTTGAACGTTaGATTTCCAGCGAGTGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: PHLSSSVERLDLSETVVLLTLER*ISSECR Trigger: CCGACACTCGCTGGAAATTCAACGTTCAAGAGTTAG...CAGTACTACTGTCTCTGACAGATCCAGCCTCTCCACAGAGCTGGAGAGGTGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016279.11 ENSMUST00000202031.4 |
||
| CDS-3UTR GCA 90 bp | CCTCACCTCTCCAGCTCTGTGGAGAGGCTGGATCTGTCAGAGACAGTAGTACTGCTCAAGAGCCATGACTaGATAGGGCTTCATTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PHLSSSVERLDLSETVVLLKSHD*IGLHFP Trigger: TGGGAAATGAAGCCCTATGCAGTCATGGCTCTTGAG...CAGTACTACTGTCTCTGACAGATCCAGCCTCTCCACAGAGCTGGAGAGGTGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016279.11 ENSMUST00000202031.4 |
||
| CDS-3UTR GCA 90 bp | GTCAGAGACAGTAGTACTGCAGCCTATAGAAATGTACTAGTACCATCTTGTTTTGGAGGCGGCTGCTGCTaGCGCTGTTGGAGGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VRDSSTAAYRNVLVPSCFGGGCC*RCWRLS Trigger: GCTGAGCCTCCAACAGCGGCAGCAGCAGCCGCCTCC...AAAACAAGATGGTACTAGTACATTTCTATAGGCTGCAGTACTACTGTCTCTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016279.11 |
||
| CDS-3UTR GCA 90 bp | AGATCATCAAAGCGGCAATGGCACCAAGCTGCTTCCTGCCTCTGCCTCCCTCACTATGCCATTCCTCATTaGTTTCCTTGCTCTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RSSKRQWHQAASCLCLPHYAIPH*FPCSSL Trigger: CAGAGAAGAGCAAGGAAAGCAATGAGGAATGGCATA...GTGAGGGAGGCAGAGGCAGGAAGCAGCTTGGTGCCATTGCCGCTTTGATGATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016279.11 |
||
| CDS-3UTR GCA 90 bp | AGATCATCAAAGCGGCAATGGCACCAAGCTGCTTCCTGCCTCTGCCTCCCTCACTTCATTTCCCAGGCGTaGAGGTTGGTGTTATCAATA | + |
|
Preference number: 4 (lower is better) Translates to: RSSKRQWHQAASCLCLPHFISQA*RLVLSI Trigger: TATTGATAACACCAACCTGCACGCCTGGGAAATGAA...GTGAGGGAGGCAGAGGCAGGAAGCAGCTTGGTGCCATTGCCGCTTTGATGATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016279.11 ENSMUST00000202031.4 |
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| CDS-3UTR CCA 90 bp | GAGGAGTTTGTCCTGACACTGCTGTCTACAGGGTTTGACTATAATGGTACTGATCGTGCTGCAGCTGTCTaGCCAGCGTGGTTTTTCCCG | + |
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Preference number: 4 (lower is better) Translates to: EEFVLTLLSTGFDYNGTDRAAAV*PAWFFP Trigger: CGGGAAAAACCACGCTGGCCAGACAGCTGCAGCACG...ATCAGTACCATTATAGTCAAACCCTGTAGACAGCAGTGTCAGGACAAACTCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016279.11 |
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| CDS-3UTR CCA 90 bp | ACAGTGTCTCCGTTCTACATGGTGTTATTTAAGGCAATCTTCTATTCTTCTCTCGGCAGCTGGCCAGCGTaGTTTTTCCCGAGCCCGGGA | + |
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Preference number: 4 (lower is better) Translates to: TVSPFYMVLFKAIFYSSLGSWPA*FFPSPG Trigger: TCCCGGGCTCGGGAAAAACCACGCTGGCCAGCTGCC...GAGAGAAGAATAGAAGATTGCCTTAAATAACACCATGTAGAACGGAGACACTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200840.2 |
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| CDS-3UTR TCA 90 bp | TCTGTGGAGAGGCTGGATCTGTCAGAGACAGTAGTACTGCAGCCTATAGAAATGAAAAGTCATCGGTGCTaGAAATCAGGGCTCTGGGGT | + |
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Preference number: 4 (lower is better) Translates to: SVERLDLSETVVLQPIEMKSHRC*KSGLWG Trigger: ACCCCAGAGCCCTGATTTTCAGCACCGATGACTTTT...CATTTCTATAGGCTGCAGTACTACTGTCTCTGACAGATCCAGCCTCTCCACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016279.11 |
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| CDS-3UTR GCA 90 bp | TGGGCATGGCTTTCATATCTCCTTGTATCACCCTGGCTGCTTCCTTGCTTTGCAGGTTTCTGTTCGCTCTaGTCGGCTTTTCTGCATGAA | + |
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Preference number: 4 (lower is better) Translates to: WAWLSYLLVSPWLLPCFAGFCSL*SAFLHE Trigger: TTCATGCAGAAAAGCCGAGCAGAGCGAACAGAAACC...TGCAAAGCAAGGAAGCAGCCAGGGTGATACAAGGAGATATGAAAGCCATGCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016279.11 ENSMUST00000202031.4 |
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| CDS-3UTR TCA 90 bp | GGGCATGGCTTTCATATCTCCTTGTATCACCCTGGCTGCTTCCTTGCTTTGCACTATTCTCAAGAGCCATaGCTGCATAGGGCTTCATTT | + |
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Preference number: 4 (lower is better) Translates to: GHGFHISLYHPGCFLALHYSQEP*LHRASF Trigger: AAATGAAGCCCTATGCAGTCATGGCTCTTGAGAATA...GTGCAAAGCAAGGAAGCAGCCAGGGTGATACAAGGAGATATGAAAGCCATGCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016279.11 ENSMUST00000202031.4 |
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| CDS-3UTR GCA 90 bp | TCTGTGGAGAGGCTGGATCTGTCAGAGACAGTAGTACTGCAGCCTATAGAAATGCTCAAGAGCCATGACTaGATAGGGCTTCATTTCCCA | + |
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Preference number: 4 (lower is better) Translates to: SVERLDLSETVVLQPIEMLKSHD*IGLHFP Trigger: TGGGAAATGAAGCCCTATGCAGTCATGGCTCTTGAG...CATTTCTATAGGCTGCAGTACTACTGTCTCTGACAGATCCAGCCTCTCCACAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016279.11 ENSMUST00000202031.4 |
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| CDS-3UTR GCA 90 bp | TGGGCATGGCTTTCATATCTCCTTGTATCACCCTGGCTGCTTCCTTGCTTTGCATCTGCTCGGCTTTTCTaGATGAAGGACACTGTGAAA | + |
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Preference number: 4 (lower is better) Translates to: WAWLSYLLVSPWLLPCFASARLF*MKDTVK Trigger: TTTCACAGTGTCCTTCATGCAGAAAAGCCGAGCAGA...TGCAAAGCAAGGAAGCAGCCAGGGTGATACAAGGAGATATGAAAGCCATGCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016279.11 ENSMUST00000202031.4 |
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| CDS-3UTR TCA 90 bp | AGGTGGGCATGGCTTTCATATCTCCTTGTATCACCCTGGCTGCTTCCTTGCTTTCTTCTTGCTAACTCTTaGACGTTGAATTTCCAGCGA | + |
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Preference number: 4 (lower is better) Translates to: RWAWLSYLLVSPWLLPCFLLANS*TLNFQR Trigger: TCGCTGGAAATTCAACGTTCAAGAGTTAGCAAGAAG...AAAGCAAGGAAGCAGCCAGGGTGATACAAGGAGATATGAAAGCCATGCCCACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016279.11 ENSMUST00000202031.4 |
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| CDS-3UTR GCA 90 bp | TGGGCATGGCTTTCATATCTCCTTGTATCACCCTGGCTGCTTCCTTGCTTTGCATTCATTTCCCAGGCGTaGAGGTTGGTGTTATCAATA | + |
|
Preference number: 4 (lower is better) Translates to: WAWLSYLLVSPWLLPCFAFISQA*RLVLSI Trigger: TATTGATAACACCAACCTGCACGCCTGGGAAATGAA...TGCAAAGCAAGGAAGCAGCCAGGGTGATACAAGGAGATATGAAAGCCATGCCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016279.11 ENSMUST00000202031.4 |
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| 3UTR CAA 72 bp | GGAAGGTCTTGCTGTGACTTCCAGACTGGTTCTTACTaGCAACCCACCCTGCGGAACTTTATATATAAACCC | + |
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Preference number: 4 (lower is better) Translates to: GRSCCDFQTGSY*QPTLRNFIYKP Trigger: GGGTTTATATATAAAGTTCCGCAGGGTGGGTTGCAAGTAAGAACCAGTCTGGAAGTCACAGCAAGACCTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000200840.2 ENSMUST00000201319.2 |
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| CDS-3UTR TCA 90 bp | TCTGTGGAGAGGCTGGATCTGTCAGAGACAGTAGTACTGCAGCCTATAGAAATGTATTCTCAAGAGCCATaGCTGCATAGGGCTTCATTT | + |
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Preference number: 4 (lower is better) Translates to: SVERLDLSETVVLQPIEMYSQEP*LHRASF Trigger: AAATGAAGCCCTATGCAGTCATGGCTCTTGAGAATA...CATTTCTATAGGCTGCAGTACTACTGTCTCTGACAGATCCAGCCTCTCCACAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016279.11 ENSMUST00000202031.4 |
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| CDS-3UTR GCA 90 bp | GTCAGAGACAGTAGTACTGCAGCCTATAGAAATGTACTAGTACCATCTTGTTTTACGGTTCGCTGTTCCTaGCCTGGTTTCTGTTCGCTC | + |
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Preference number: 4 (lower is better) Translates to: VRDSSTAAYRNVLVPSCFTVRCS*PGFCSL Trigger: GAGCGAACAGAAACCAGGGCAGGAACAGCGAACCGT...AAAACAAGATGGTACTAGTACATTTCTATAGGCTGCAGTACTACTGTCTCTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016279.11 ENSMUST00000202031.4 |
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| CDS-3UTR GCA 90 bp | GAGGAGTTTGTCCTGACACTGCTGTCTACAGGGTTTGACTATAATGGTACTGATTCTGCTCGGCTTTTCTaGATGAAGGACACTGTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: EEFVLTLLSTGFDYNGTDSARLF*MKDTVK Trigger: TTTCACAGTGTCCTTCATGCAGAAAAGCCGAGCAGA...ATCAGTACCATTATAGTCAAACCCTGTAGACAGCAGTGTCAGGACAAACTCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016279.11 ENSMUST00000202031.4 |
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| CDS-3UTR CCA 90 bp | GAGGAGTTTGTCCTGACACTGCTGTCTACAGGGTTTGACTATAATGGTACTGATTCTTTTGGGACCCCATaGATGTTTCTTCTTGCTAAC | + |
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Preference number: 4 (lower is better) Translates to: EEFVLTLLSTGFDYNGTDSFGTP*MFLLAN Trigger: GTTAGCAAGAAGAAACATCCATGGGGTCCCAAAAGA...ATCAGTACCATTATAGTCAAACCCTGTAGACAGCAGTGTCAGGACAAACTCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016279.11 ENSMUST00000202031.4 |
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| CDS-3UTR TCA 90 bp | GGACTACATTCCCTTCTGCACTTTAGGTCTAAAAGAAAATCAGTGCCATTAAAGCTTCTTGCTAACTCTTaGACGTTGAATTTCCAGCGA | + |
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Preference number: 4 (lower is better) Translates to: GLHSLLHFRSKRKSVPLKLLANS*TLNFQR Trigger: TCGCTGGAAATTCAACGTTCAAGAGTTAGCAAGAAG...CTTTAATGGCACTGATTTTCTTTTAGACCTAAAGTGCAGAAGGGAATGTAGTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016279.11 ENSMUST00000202031.4 |
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| CDS CCA 90 bp | AAATCAGGGCTCTGGGGTAGTCGTGCTGCAGCTGTCTGGCCAGCGTaGTTTTTCCCGAGCCCGGGAGGCCGCGCAGGAGGTAGAGGTGTT | + |
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Preference number: 5 (lower is better) Translates to: KSGLWGSRAAAVWPA*FFPSPGGRAGGRGV Trigger: AACACCTCTACCTCCTGCGCGGCCTCCCGGGCTCGGGAAAAACCACGCTGGCCAGACAGCTGCAGCACGACTACCCCAGAGCCCTGATTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016279.11 |
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| CDS-3UTR CAA 90 bp | GAGGCCATTAGCTCTCCGGTTGGGGAGCTCTGTGTAGGTGTTCCAGTAGCCGGACTGCTGCTGCCGCTGTaGGAGGCTCAGCCTCCCGAA | + |
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Preference number: 5 (lower is better) Translates to: EAISSPVGELCVGVPVAGLLLPL*EAQPPE Trigger: TTCGGGAGGCTGAGCCTCCAACAGCGGCAGCAGCAG...TCCGGCTACTGGAACACCTACACAGAGCTCCCCAACCGGAGAGCTAATGGCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202279.4 |
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| CDS-3UTR CAA 90 bp | GGTTTGCCTCCTCTGGTCACAGCCAATGCCTCTGTAACTCCGAGGGCTTGTCCTCTGCTGCTGCCGCTGTaGGAGGCTCAGCCTCCCGAA | + |
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Preference number: 5 (lower is better) Translates to: GLPPLVTANASVTPRACPLLLPL*EAQPPE Trigger: TTCGGGAGGCTGAGCCTCCAACAGCGGCAGCAGCAG...AGGACAAGCCCTCGGAGTTACAGAGGCATTGGCTGTGACCAGAGGAGGCAAACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000200840.2 ENSMUST00000201319.2 |
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| CDS-3UTR CAA 90 bp | TCTCTCTCCTATTCCCTCCCTGGAAAACATGGTCTGGGAAGGTCTTGCTGTGACCTGCTGCTGCCGCTGTaGGAGGCTCAGCCTCCCGAA | + |
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Preference number: 5 (lower is better) Translates to: SLSYSLPGKHGLGRSCCDLLLPL*EAQPPE Trigger: TTCGGGAGGCTGAGCCTCCAACAGCGGCAGCAGCAG...GTCACAGCAAGACCTTCCCAGACCATGTTTTCCAGGGAGGGAATAGGAGAGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000200840.2 ENSMUST00000201319.2 |
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| CDS-3UTR CAA 90 bp | GGACTACATTCCCTTCTGCACTTTAGGTCTAAAAGAAAATCAGTGCCATTAAAGCTGCTGCTGCCGCTGTaGGAGGCTCAGCCTCCCGAA | + |
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Preference number: 5 (lower is better) Translates to: GLHSLLHFRSKRKSVPLKLLLPL*EAQPPE Trigger: TTCGGGAGGCTGAGCCTCCAACAGCGGCAGCAGCAG...CTTTAATGGCACTGATTTTCTTTTAGACCTAAAGTGCAGAAGGGAATGTAGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016279.11 |
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| CDS-3UTR CAA 90 bp | GGGCATGGCTTTCATATCTCCTTGTATCACCCTGGCTGCTTCCTTGCTTTGCACTCCCAGGCGTGCAGGTaGGTGTTATCAATAATAATG | + |
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Preference number: 5 (lower is better) Translates to: GHGFHISLYHPGCFLALHSQACR*VLSIIM Trigger: CATTATTATTGATAACACCAACCTGCACGCCTGGGA...GTGCAAAGCAAGGAAGCAGCCAGGGTGATACAAGGAGATATGAAAGCCATGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016279.11 ENSMUST00000202031.4 |
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| CDS-3UTR CAA 90 bp | TGGGCATGGCTTTCATATCTCCTTGTATCACCCTGGCTGCTTCCTTGCTTTGCATCCCAGGCGTGCAGGTaGGTGTTATCAATAATAATG | + |
|
Preference number: 5 (lower is better) Translates to: WAWLSYLLVSPWLLPCFASQACR*VLSIIM Trigger: CATTATTATTGATAACACCAACCTGCACGCCTGGGA...TGCAAAGCAAGGAAGCAGCCAGGGTGATACAAGGAGATATGAAAGCCATGCCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016279.11 ENSMUST00000202031.4 |
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| CDS-3UTR CAA 90 bp | AGGTGGGCATGGCTTTCATATCTCCTTGTATCACCCTGGCTGCTTCCTTGCTTTATATGCCATTCCTCATaGCTTTCCTTGCTCTTCTCT | + |
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Preference number: 5 (lower is better) Translates to: RWAWLSYLLVSPWLLPCFICHSS*LSLLFS Trigger: AGAGAAGAGCAAGGAAAGCAATGAGGAATGGCATAT...AAAGCAAGGAAGCAGCCAGGGTGATACAAGGAGATATGAAAGCCATGCCCACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016279.11 |
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| CDS CCA 72 bp | CTCTGGGGTAGTCGTGCTGCAGCTGTCTGGCCAGCGTaGTTTTTCCCGAGCCCGGGAGGCCGCGCAGGAGGT | + |
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Preference number: 6 (lower is better) Translates to: LWGSRAAAVWPA*FFPSPGGRAGG Trigger: ACCTCCTGCGCGGCCTCCCGGGCTCGGGAAAAACCACGCTGGCCAGACAGCTGCAGCACGACTACCCCAGAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016279.11 |
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