Pregenerated sensors for MZT2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022671Ensembl transcript IDs: ENSMUST00000023351.11, ENSMUST00000117136.2, ENSMUST00000229680.2
Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GTGCAGCCTCTGTCCCAGCCTATGGGCTGCTTCGGGAGTTGCTTTTTCCAGATCCGAGTCGCACTGGGCTaGCGTGGCATTCTCTGGATG | + |
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Preference number: 2 (lower is better) Translates to: VQPLSQPMGCFGSCFFQIRVALG*RGILWM Trigger: CATCCAGAGAATGCCACGCCAGCCCAGTGCGACTCG...GATCTGGAAAAAGCAACTCCCGAAGCAGCCCATAGGCTGGGACAGAGGCTGCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229680.2 |
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| 3UTR GCA 72 bp | CAGCCTCTGTCCCAGCCTATGGGCTGCTTCGGGAGTTaGTTTTTCCAGATCCTCCCACCTTGGGCAGCCGAG | + |
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Preference number: 3 (lower is better) Translates to: QPLSQPMGCFGS*FFQILPPWAAE Trigger: CTCGGCTGCCCAAGGTGGGAGGATCTGGAAAAAGCAACTCCCGAAGCAGCCCATAGGCTGGGACAGAGGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229680.2 |
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| 3UTR GCA 72 bp | CGGTGTCAAGTGCAGCCTCTGTCCCAGCCTATGGGCTaGTTCGGGAGTTGCTTTTTCCAGATCCTCCCACCT | + |
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Preference number: 3 (lower is better) Translates to: RCQVQPLSQPMG*FGSCFFQILPP Trigger: AGGTGGGAGGATCTGGAAAAAGCAACTCCCGAAGCAGCCCATAGGCTGGGACAGAGGCTGCACTTGACACCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229680.2 |
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| 3UTR CCA 72 bp | GAAGACGGTGTCAAGTGCAGCCTCTGTCCCAGCCTATaGGCTGCTTCGGGAGTTGCTTTTTCCAGATCCTCC | + |
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Preference number: 3 (lower is better) Translates to: EDGVKCSLCPSL*AASGVAFSRSS Trigger: GGAGGATCTGGAAAAAGCAACTCCCGAAGCAGCCCATAGGCTGGGACAGAGGCTGCACTTGACACCGTCTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229680.2 |
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| 3UTR GCA 72 bp | AAGGTGGATAGCATCTGTCTTGAAGACGGTGTCAAGTaGAGCCTCTGTCCCAGCCTATGGGCTGCTTCGGGA | + |
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Preference number: 3 (lower is better) Translates to: KVDSICLEDGVK*SLCPSLWAASG Trigger: TCCCGAAGCAGCCCATAGGCTGGGACAGAGGCTGCACTTGACACCGTCTTCAAGACAGATGCTATCCACCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229680.2 |
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| 3UTR TCA 72 bp | CTACAGACATTCAGCTCCTCAGAAGGGTTTGAGGAGTaGAGGTGGATAGCATCTGTCTTGAAGACGGTGTCA | + |
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Preference number: 3 (lower is better) Translates to: LQTFSSSEGFEE*RWIASVLKTVS Trigger: TGACACCGTCTTCAAGACAGATGCTATCCACCTTCACTCCTCAAACCCTTCTGAGGAGCTGAATGTCTGTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023351.11 ENSMUST00000117136.2 ENSMUST00000229680.2 |
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| 3UTR TCA 72 bp | CAAAAAGCTACAGACATTCAGCTCCTCAGAAGGGTTTaGGGAGTGAAGGTGGATAGCATCTGTCTTGAAGAC | + |
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Preference number: 3 (lower is better) Translates to: QKATDIQLLRRV*GVKVDSICLED Trigger: GTCTTCAAGACAGATGCTATCCACCTTCACTCCTCAAACCCTTCTGAGGAGCTGAATGTCTGTAGCTTTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023351.11 ENSMUST00000117136.2 ENSMUST00000229680.2 |
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| CDS-3UTR GCA 90 bp | TGGGCTGCTTCGGGAGTTGCTTTTTCCAGATCCTCCCACCTTGGGCAGCCGAGTCAGCTTCTGCAGCGTTaGTGTCTCCAATCCTGTGGA | + |
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Preference number: 4 (lower is better) Translates to: WAASGVAFSRSSHLGQPSQLLQR*CLQSCG Trigger: TCCACAGGATTGGAGACAGCAACGCTGCAGAAGCTG...ACTCGGCTGCCCAAGGTGGGAGGATCTGGAAAAAGCAACTCCCGAAGCAGCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229680.2 |
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| CDS-3UTR CCA 90 bp | TCAAAAAGCTACAGACATTCAGCTCCTCAGAAGGGTTTGAGGAGTGAAGGTGGACGAGTCGCACTGGGCTaGCGTGGCATTCTCTGGATG | + |
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Preference number: 4 (lower is better) Translates to: SKSYRHSAPQKGLRSEGGRVALG*RGILWM Trigger: CATCCAGAGAATGCCACGCCAGCCCAGTGCGACTCG...TCCACCTTCACTCCTCAAACCCTTCTGAGGAGCTGAATGTCTGTAGCTTTTTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023351.11 ENSMUST00000117136.2 |
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| CDS-3UTR CCA 90 bp | GTATCAAAAAGCTACAGACATTCAGCTCCTCAGAAGGGTTTGAGGAGTGAAGGTCGAGTCGCACTGGGCTaGCGTGGCATTCTCTGGATG | + |
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Preference number: 4 (lower is better) Translates to: VSKSYRHSAPQKGLRSEGRVALG*RGILWM Trigger: CATCCAGAGAATGCCACGCCAGCCCAGTGCGACTCG...ACCTTCACTCCTCAAACCCTTCTGAGGAGCTGAATGTCTGTAGCTTTTTGATAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023351.11 ENSMUST00000117136.2 |
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| CDS-3UTR CCA 90 bp | TCAAAAAGCTACAGACATTCAGCTCCTCAGAAGGGTTTGAGGAGTGAAGGTGGAGTGGCATTCTCTGGATaGGTCTTTCACGGCTTCCAC | + |
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Preference number: 4 (lower is better) Translates to: SKSYRHSAPQKGLRSEGGVAFSG*VFHGFH Trigger: GTGGAAGCCGTGAAAGACCCATCCAGAGAATGCCAC...TCCACCTTCACTCCTCAAACCCTTCTGAGGAGCTGAATGTCTGTAGCTTTTTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023351.11 ENSMUST00000117136.2 |
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| CDS-3UTR CCA 90 bp | GTATCAAAAAGCTACAGACATTCAGCTCCTCAGAAGGGTTTGAGGAGTGAAGGTTGGCGTGGCATTCTCTaGATGGGTCTTTCACGGCTT | + |
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Preference number: 4 (lower is better) Translates to: VSKSYRHSAPQKGLRSEGWRGIL*MGLSRL Trigger: AAGCCGTGAAAGACCCATCCAGAGAATGCCACGCCA...ACCTTCACTCCTCAAACCCTTCTGAGGAGCTGAATGTCTGTAGCTTTTTGATAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023351.11 ENSMUST00000117136.2 |
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| CDS-3UTR GCA 90 bp | TTTTTAATAGTATCAAAAAGCTACAGACATTCAGCTCCTCAGAAGGGTTTGAGGCAGCTTCTGCAGCGTTaGTGTCTCCAATCCTGTGGA | + |
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Preference number: 4 (lower is better) Translates to: FLIVSKSYRHSAPQKGLRQLLQR*CLQSCG Trigger: TCCACAGGATTGGAGACAGCAACGCTGCAGAAGCTG...CCTCAAACCCTTCTGAGGAGCTGAATGTCTGTAGCTTTTTGATACTATTAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000023351.11 ENSMUST00000117136.2 ENSMUST00000229680.2 |
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| CDS-3UTR CCA 90 bp | TTTTTAATAGTATCAAAAAGCTACAGACATTCAGCTCCTCAGAAGGGTTTGAGGTGGCGTGGCATTCTCTaGATGGGTCTTTCACGGCTT | + |
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Preference number: 4 (lower is better) Translates to: FLIVSKSYRHSAPQKGLRWRGIL*MGLSRL Trigger: AAGCCGTGAAAGACCCATCCAGAGAATGCCACGCCA...CCTCAAACCCTTCTGAGGAGCTGAATGTCTGTAGCTTTTTGATACTATTAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023351.11 ENSMUST00000117136.2 |
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| CDS-3UTR CAA 90 bp | CTCTGTCCCAGCCTATGGGCTGCTTCGGGAGTTGCTTTTTCCAGATCCTCCCACCCAGCTTCTGCAGCGTaGCTGTCTCCAATCCTGTGG | + |
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Preference number: 5 (lower is better) Translates to: LCPSLWAASGVAFSRSSHPASAA*LSPILW Trigger: CCACAGGATTGGAGACAGCAACGCTGCAGAAGCTGG...GTGGGAGGATCTGGAAAAAGCAACTCCCGAAGCAGCCCATAGGCTGGGACAGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229680.2 |
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| CDS-3UTR CAA 90 bp | GCCTCTGTCCCAGCCTATGGGCTGCTTCGGGAGTTGCTTTTTCCAGATCCTCCCGCCGATATGGTCACATaGCCAAGAATGGGGCCACCT | + |
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Preference number: 5 (lower is better) Translates to: ASVPAYGLLRELLFPDPPADMVT*PRMGPP Trigger: AGGTGGCCCCATTCTTGGCAATGTGACCATATCGGC...GGGAGGATCTGGAAAAAGCAACTCCCGAAGCAGCCCATAGGCTGGGACAGAGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000229680.2 |
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| CDS TCA 90 bp | CCTTCTCCTCAGCCTTCTCAACCTAAAGGTGGCACCTCGGGTCTCTaGTGTGGATGTAGACAGAGATATGGGCACCGAGTCCTGGGGATC | + |
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Preference number: 5 (lower is better) Translates to: PSPQPSQPKGGTSGL*CGCRQRYGHRVLGI Trigger: GATCCCCAGGACTCGGTGCCCATATCTCTGTCTACATCCACATCAGAGACCCGAGGTGCCACCTTTAGGTTGAGAAGGCTGAGGAGAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229680.2 |
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| CDS GCA 90 bp | CTGGCGTGGCATTCTCTGGATGGGTCTTTCACGGCTTCCACGTTCTaGCGATATGGTCACATTGCCAAGAATGGGGCCACCTCGGTTTCT | + |
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Preference number: 5 (lower is better) Translates to: LAWHSLDGSFTASTF*RYGHIAKNGATSVS Trigger: AGAAACCGAGGTGGCCCCATTCTTGGCAATGTGACCATATCGGCAGAACGTGGAAGCCGTGAAAGACCCATCCAGAGAATGCCACGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023351.11 ENSMUST00000117136.2 |
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| CDS-3UTR CAA 90 bp | AGCCTATGGGCTGCTTCGGGAGTTGCTTTTTCCAGATCCTCCCACCTTGGGCAGAAGTCCACCAGGATCTaGAACACATCGGGGTCGATG | + |
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Preference number: 5 (lower is better) Translates to: SLWAASGVAFSRSSHLGQKSTRI*NTSGSM Trigger: CATCGACCCCGATGTGTTCAAGATCCTGGTGGACTT...CTGCCCAAGGTGGGAGGATCTGGAAAAAGCAACTCCCGAAGCAGCCCATAGGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000229680.2 |
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| CDS-3UTR CAA 90 bp | TCAAAAAGCTACAGACATTCAGCTCCTCAGAAGGGTTTGAGGAGTGAAGGTGGACCAGATCCTCCCACCTaGGGCAGCCGAGTCGCACTG | + |
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Preference number: 5 (lower is better) Translates to: SKSYRHSAPQKGLRSEGGPDPPT*GSRVAL Trigger: CAGTGCGACTCGGCTGCCCAAGGTGGGAGGATCTGG...TCCACCTTCACTCCTCAAACCCTTCTGAGGAGCTGAATGTCTGTAGCTTTTTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023351.11 ENSMUST00000117136.2 |
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| CDS-3UTR CAA 90 bp | TCAAAAAGCTACAGACATTCAGCTCCTCAGAAGGGTTTGAGGAGTGAAGGTGGACCAGCTTCTGCAGCGTaGCTGTCTCCAATCCTGTGG | + |
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Preference number: 5 (lower is better) Translates to: SKSYRHSAPQKGLRSEGGPASAA*LSPILW Trigger: CCACAGGATTGGAGACAGCAACGCTGCAGAAGCTGG...TCCACCTTCACTCCTCAAACCCTTCTGAGGAGCTGAATGTCTGTAGCTTTTTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023351.11 ENSMUST00000117136.2 ENSMUST00000229680.2 |
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| CDS-3UTR CAA 90 bp | TCAAAAAGCTACAGACATTCAGCTCCTCAGAAGGGTTTGAGGAGTGAAGGTGGAAAGTCCACCAGGATCTaGAACACATCGGGGTCGATG | + |
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Preference number: 5 (lower is better) Translates to: SKSYRHSAPQKGLRSEGGKSTRI*NTSGSM Trigger: CATCGACCCCGATGTGTTCAAGATCCTGGTGGACTT...TCCACCTTCACTCCTCAAACCCTTCTGAGGAGCTGAATGTCTGTAGCTTTTTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023351.11 ENSMUST00000117136.2 ENSMUST00000229680.2 |
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| CDS-3UTR CAA 90 bp | GTATCAAAAAGCTACAGACATTCAGCTCCTCAGAAGGGTTTGAGGAGTGAAGGTGCCGATATGGTCACATaGCCAAGAATGGGGCCACCT | + |
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Preference number: 5 (lower is better) Translates to: VSKSYRHSAPQKGLRSEGADMVT*PRMGPP Trigger: AGGTGGCCCCATTCTTGGCAATGTGACCATATCGGC...ACCTTCACTCCTCAAACCCTTCTGAGGAGCTGAATGTCTGTAGCTTTTTGATAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023351.11 ENSMUST00000117136.2 ENSMUST00000229680.2 |
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| CDS-3UTR CAA 90 bp | TTTTTAATAGTATCAAAAAGCTACAGACATTCAGCTCCTCAGAAGGGTTTGAGGCCAGATCCTCCCACCTaGGGCAGCCGAGTCGCACTG | + |
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Preference number: 5 (lower is better) Translates to: FLIVSKSYRHSAPQKGLRPDPPT*GSRVAL Trigger: CAGTGCGACTCGGCTGCCCAAGGTGGGAGGATCTGG...CCTCAAACCCTTCTGAGGAGCTGAATGTCTGTAGCTTTTTGATACTATTAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023351.11 ENSMUST00000117136.2 |
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| CDS-3UTR CAA 90 bp | ATAGTATCAAAAAGCTACAGACATTCAGCTCCTCAGAAGGGTTTGAGGAGTGAAGCCGATATGGTCACATaGCCAAGAATGGGGCCACCT | + |
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Preference number: 5 (lower is better) Translates to: IVSKSYRHSAPQKGLRSEADMVT*PRMGPP Trigger: AGGTGGCCCCATTCTTGGCAATGTGACCATATCGGC...TTCACTCCTCAAACCCTTCTGAGGAGCTGAATGTCTGTAGCTTTTTGATACTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023351.11 ENSMUST00000117136.2 ENSMUST00000229680.2 |
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| CDS-3UTR CAA 90 bp | TTTTTAATAGTATCAAAAAGCTACAGACATTCAGCTCCTCAGAAGGGTTTGAGGCCAGCTTCTGCAGCGTaGCTGTCTCCAATCCTGTGG | + |
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Preference number: 5 (lower is better) Translates to: FLIVSKSYRHSAPQKGLRPASAA*LSPILW Trigger: CCACAGGATTGGAGACAGCAACGCTGCAGAAGCTGG...CCTCAAACCCTTCTGAGGAGCTGAATGTCTGTAGCTTTTTGATACTATTAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000023351.11 ENSMUST00000117136.2 ENSMUST00000229680.2 |
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| CDS CCA 72 bp | GCGCCAGCTTCTGCAGCGTTGCTGTCTCCAATCCTGTaGAAACCGCGAGTGCAGCACCACCAGCAGCAGCCG | + |
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Preference number: 6 (lower is better) Translates to: APASAALLSPIL*KPRVQHHQQQP Trigger: CGGCTGCTGCTGGTGGTGCTGCACTCGCGGTTTCCACAGGATTGGAGACAGCAACGCTGCAGAAGCTGGCGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023351.11 ENSMUST00000117136.2 ENSMUST00000229680.2 |
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| CDS CCA 72 bp | GATGTGGATGTAGACAGAGATATGGGCACCGAGTCCTaGGGATCGCTTGCCAGCCGCTGCCCAGCACACATG | + |
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Preference number: 6 (lower is better) Translates to: DVDVDRDMGTES*GSLASRCPAHM Trigger: CATGTGTGCTGGGCAGCGGCTGGCAAGCGATCCCCAGGACTCGGTGCCCATATCTCTGTCTACATCCACATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023351.11 ENSMUST00000117136.2 ENSMUST00000229680.2 |
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