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Pregenerated sensors for MZT1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000033186

Ensembl transcript IDs: ENSMUST00000042662.10, ENSMUST00000227948.2

Found 11 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAGCGTACGCTGGCCTGCGAGTCACCGTTCCTCGGCCTCAGCCTCTaGCAGCAGGGACTACTGACCAGCAGACGAGATGAGTCTCAGAGC +
Preference number: 1 (lower is better)
Translates to: QRTLACESPFLGLSL*QQGLLTSRRDESQS
Trigger: GCTCTGAGACTCATCTCGTCTGCTGGTCAGTAGTCCCTGCTGTCAGAGGCTGAGGCCGAGGAACGGTGACTCGCAGGCCAGCGTACGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042662.10
3UTR TCA 90 bp GCGAGTCACCGTTCCTCGGCCTCAGCCTCTGACAGCAGGGACTACTaGCCAGCAGACGAGATGAGTCTCAGAGCAGAGGAAACAGCTACT +
Preference number: 1 (lower is better)
Translates to: ASHRSSASASDSRDY*PADEMSLRAEETAT
Trigger: AGTAGCTGTTTCCTCTGCTCTGAGACTCATCTCGTCTGCTGGTCAGTAGTCCCTGCTGTCAGAGGCTGAGGCCGAGGAACGGTGACTCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042662.10
3UTR-3UTR TCA 90 bp TACATAAATAAGTGTGGCAACACTCTGGAGTTGGGGCCATTACAACAAGACGTGTGTAAACACACGTGCTaGTTCTCGCTCAAGCCACTT +
Preference number: 2 (lower is better)
Translates to: YINKCGNTLELGPLQQDVCKHTC*FSLKPL
Trigger: AAGTGGCTTGAGCGAGAATCAGCACGTGTGTTTACA...CACGTCTTGTTGTAATGGCCCCAACTCCAGAGTGTTGCCACACTTATTTATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042662.10
ENSMUST00000227948.2
3UTR-3UTR TCA 90 bp CAAGATGTGAAACAGAAAACTTCACAAACAGCAGCTCAAATTCCATTAACTTACTGTAAACACACGTGCTaGTTCTCGCTCAAGCCACTT +
Preference number: 2 (lower is better)
Translates to: QDVKQKTSQTAAQIPLTYCKHTC*FSLKPL
Trigger: AAGTGGCTTGAGCGAGAATCAGCACGTGTGTTTACA...GTAAGTTAATGGAATTTGAGCTGCTGTTTGTGAAGTTTTCTGTTTCACATCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042662.10
ENSMUST00000227948.2
3UTR-3UTR TCA 90 bp CAAGATGTGAAACAGAAAACTTCACAAACAGCAGCTCAAATTCCATTAACTTACACTACACATCACCTCTaGTACAACCCACTAACTTCA +
Preference number: 2 (lower is better)
Translates to: QDVKQKTSQTAAQIPLTYTTHHL*YNPLTS
Trigger: TGAAGTTAGTGGGTTGTATCAGAGGTGATGTGTAGT...GTAAGTTAATGGAATTTGAGCTGCTGTTTGTGAAGTTTTCTGTTTCACATCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042662.10
ENSMUST00000227948.2
3UTR CCA 72 bp GATCAGGTCTCACTTTGTTGCCTAAGCAGCGTACGCTaGCCTGCGAGTCACCGTTCCTCGGCCTCAGCCTCT +
Preference number: 3 (lower is better)
Translates to: DQVSLCCLSSVR*PASHRSSASAS
Trigger: AGAGGCTGAGGCCGAGGAACGGTGACTCGCAGGCCAGCGTACGCTGCTTAGGCAACAAAGTGAGACCTGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042662.10
3UTR TCA 72 bp CGTTCCTCGGCCTCAGCCTCTGACAGCAGGGACTACTaGCCAGCAGACGAGATGAGTCTCAGAGCAGAGGAA +
Preference number: 3 (lower is better)
Translates to: RSSASASDSRDY*PADEMSLRAEE
Trigger: TTCCTCTGCTCTGAGACTCATCTCGTCTGCTGGTCAGTAGTCCCTGCTGTCAGAGGCTGAGGCCGAGGAACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042662.10
3UTR GCA 72 bp ATACAACCCACTAACTTCAAACAGGCTCAGCAGCTGTaGATGTCGGGTAGATGCTGTTTAGAAACTCACAGC +
Preference number: 3 (lower is better)
Translates to: IQPTNFKQAQQL*MSGRCCLETHS
Trigger: GCTGTGAGTTTCTAAACAGCATCTACCCGACATGCACAGCTGCTGAGCCTGTTTGAAGTTAGTGGGTTGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042662.10
ENSMUST00000227948.2
3UTR-3UTR CAA 90 bp AACCCACTAACTTCAAACAGGCTCAGCAGCTGTGCATGTCGGGTAGATGCTGTTACTCAGCATGCAGCATaGTCATTTTATATCTTGACT +
Preference number: 3 (lower is better)
Translates to: NPLTSNRLSSCACRVDAVTQHAA*SFYILT
Trigger: AGTCAAGATATAAAATGACAATGCTGCATGCTGAGT...AACAGCATCTACCCGACATGCACAGCTGCTGAGCCTGTTTGAAGTTAGTGGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042662.10
ENSMUST00000227948.2
3UTR-3UTR CAA 90 bp TCAACAAGTCATAACTACTACACATCACCTCTGATACAACCCACTAACTTCAAAACTCAGCATGCAGCATaGTCATTTTATATCTTGACT +
Preference number: 3 (lower is better)
Translates to: STSHNYYTSPLIQPTNFKTQHAA*SFYILT
Trigger: AGTCAAGATATAAAATGACAATGCTGCATGCTGAGT...TTTGAAGTTAGTGGGTTGTATCAGAGGTGATGTGTAGTAGTTATGACTTGTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042662.10
ENSMUST00000227948.2
CDS-3UTR CCA 90 bp TACATAAATAAGTGTGGCAACACTCTGGAGTTGGGGCCATTACAACAAGACGTGCAAGCAGAACGTCCATaGTCTCCCTCACCGCGTTCA +
Preference number: 4 (lower is better)
Translates to: YINKCGNTLELGPLQQDVQAERP*SPSPRS
Trigger: TGAACGCGGTGAGGGAGACCATGGACGTTCTGCTTG...CACGTCTTGTTGTAATGGCCCCAACTCCAGAGTGTTGCCACACTTATTTATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042662.10