Pregenerated sensors for MZB1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024353Ensembl transcript IDs: ENSMUST00000025211.6, ENSMUST00000237462.2
Found 32 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR-3UTR TCA 90 bp | GCTTTATTTGAAAGTAGAAAGGCAGCCTCAGTCCCAGTACCCCATCGAGAGGTGCCCCACCACCACAGTTaGAAAAATTATATAGGAGGG | + |
Preference number: 2 (lower is better) Translates to: ALFESRKAASVPVPHREVPHHHS*KNYIGG Trigger: CCCTCCTATATAATTTTTTCAACTGTGGTGGTGGGG...CACCTCTCGATGGGGTACTGGGACTGAGGCTGCCTTTCTACTTTCAAATAAAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025211.6 |
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3UTR-3UTR GCA 90 bp | TCAAAGCTTTATTTGAAAGTAGAAAGGCAGCCTCAGTCCCAGTACCCCATCGAGGGCTCAGGACTTAAATaGAGCACTTTCGAGGCTGAG | + |
Preference number: 2 (lower is better) Translates to: SKLYLKVERQPQSQYPIEGSGLK*STFEAE Trigger: CTCAGCCTCGAAAGTGCTGCATTTAAGTCCTGAGCC...CTCGATGGGGTACTGGGACTGAGGCTGCCTTTCTACTTTCAAATAAAGCTTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025211.6 |
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CDS-3UTR CCA 90 bp | GGCAGCCTCAGTCCCAGTACCCCATCGAGAGGTGGAGGGAGAAGATTGACAGCTGCTGATTCTTGGCTCTaGCCCCTTGCTAAGTCCTGG | + |
Preference number: 4 (lower is better) Translates to: GSLSPSTPSRGGGRRLTAADSWL*PLAKSW Trigger: CCAGGACTTAGCAAGGGGCCAGAGCCAAGAATCAGC...AGCTGTCAATCTTCTCCCTCCACCTCTCGATGGGGTACTGGGACTGAGGCTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025211.6 |
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CDS-3UTR TCA 90 bp | AGGCAGCCTCAGTCCCAGTACCCCATCGAGAGGTGGAGGGAGAAGATTGACAGCCAGAAATCATCACGCTaGTTCTTGGCTCTGGCCCCT | + |
Preference number: 4 (lower is better) Translates to: RQPQSQYPIERWREKIDSQKSSR*FLALAP Trigger: AGGGGCCAGAGCCAAGAATCAGCGTGATGATTTCTG...GCTGTCAATCTTCTCCCTCCACCTCTCGATGGGGTACTGGGACTGAGGCTGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025211.6 |
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CDS-3UTR GCA 90 bp | CAAGCACAAAAAGGCTCAGGACTTAAATGCAGCACTTTCGAGGCTGAGCAGGATAGCAGGGCCCATGGGTaGCCCCACAGAGCAGCGCCT | + |
Preference number: 4 (lower is better) Translates to: QAQKGSGLKCSTFEAEQDSRAHG*PHRAAP Trigger: AGGCGCTGCTCTGTGGGGGCACCCATGGGCCCTGCT...ATCCTGCTCAGCCTCGAAAGTGCTGCATTTAAGTCCTGAGCCTTTTTGTGCTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025211.6 |
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CDS-3UTR CCA 90 bp | AGCCTCAGTCCCAGTACCCCATCGAGAGGTGGAGGGAGAAGATTGACAGCTAGACTTCATCATCCAGTGTaGGAGCCGAAGCCGAGAGGG | + |
Preference number: 4 (lower is better) Translates to: SLSPSTPSRGGGRRLTARLHHPV*EPKPRG Trigger: CCCTCTCGGCTTCGGCTCCCACACTGGATGATGAAG...TCTAGCTGTCAATCTTCTCCCTCCACCTCTCGATGGGGTACTGGGACTGAGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025211.6 |
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CDS-3UTR CCA 90 bp | CTTTATTTGAAAGTAGAAAGGCAGCCTCAGTCCCAGTACCCCATCGAGAGGTGGTGTGAGCAGGGCCCATaGGTGCCCCCACAGAGCAGC | + |
Preference number: 4 (lower is better) Translates to: LYLKVERQPQSQYPIERWCEQGP*VPPQSS Trigger: GCTGCTCTGTGGGGGCACCCATGGGCCCTGCTCACA...CCACCTCTCGATGGGGTACTGGGACTGAGGCTGCCTTTCTACTTTCAAATAAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025211.6 |
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CDS-3UTR CCA 90 bp | AGCCTCAGTCCCAGTACCCCATCGAGAGGTGGAGGGAGAAGATTGACAGCTAGACATCACGCTGATTCTTaGCTCTGGCCCCTTGCTAAG | + |
Preference number: 4 (lower is better) Translates to: SLSPSTPSRGGGRRLTARHHADS*LWPLAK Trigger: CTTAGCAAGGGGCCAGAGCCAAGAATCAGCGTGATG...TCTAGCTGTCAATCTTCTCCCTCCACCTCTCGATGGGGTACTGGGACTGAGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025211.6 |
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CDS-3UTR CCA 90 bp | GCTTTATTTGAAAGTAGAAAGGCAGCCTCAGTCCCAGTACCCCATCGAGAGGTGTCTTGGAGAGCCTATTaGGCCAGGGACCCCCAGAAA | + |
Preference number: 4 (lower is better) Translates to: ALFESRKAASVPVPHREVSWRAY*ARDPQK Trigger: TTTCTGGGGGTCCCTGGCCCAATAGGCTCTCCAAGA...CACCTCTCGATGGGGTACTGGGACTGAGGCTGCCTTTCTACTTTCAAATAAAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025211.6 |
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CDS-3UTR GCA 90 bp | GGTCAAGCACAAAAAGGCTCAGGACTTAAATGCAGCACTTTCGAGGCTGAGCAGGATTCACTCAGCTCCTaGAATCCACTGGCGTCTGGA | + |
Preference number: 4 (lower is better) Translates to: GQAQKGSGLKCSTFEAEQDSLSS*NPLASG Trigger: TCCAGACGCCAGTGGATTGCAGGAGCTGAGTGAATC...CTGCTCAGCCTCGAAAGTGCTGCATTTAAGTCCTGAGCCTTTTTGTGCTTGACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025211.6 |
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CDS-3UTR CAA 90 bp | AGCCTCAGTCCCAGTACCCCATCGAGAGGTGGAGGGAGAAGATTGACAGCTAGACTTGGCTCTGGCCCCTaGCTAAGTCCTGGGCCCGTG | + |
Preference number: 5 (lower is better) Translates to: SLSPSTPSRGGGRRLTARLGSGP*LSPGPV Trigger: CACGGGCCCAGGACTTAGCAAGGGGCCAGAGCCAAG...TCTAGCTGTCAATCTTCTCCCTCCACCTCTCGATGGGGTACTGGGACTGAGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025211.6 |
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CDS CCA 90 bp | GAGCCTATTGGGCCAGGGACCCCCAGAAATCATCACGCTGATTCTTaGCTCTGGCCCCTTGCTAAGTCCTGGGCCCGTGAGACGCTTCAT | + |
Preference number: 5 (lower is better) Translates to: EPIGPGTPRNHHADS*LWPLAKSWARETLH Trigger: ATGAAGCGTCTCACGGGCCCAGGACTTAGCAAGGGGCCAGAGCCAAGAATCAGCGTGATGATTTCTGGGGGTCCCTGGCCCAATAGGCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025211.6 |
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CDS CCA 90 bp | ATTGGGCCAGGGACCCCCAGAAATCATCACGCTGATTCTTGGCTCTaGCCCCTTGCTAAGTCCTGGGCCCGTGAGACGCTTCATCTGGTT | + |
Preference number: 5 (lower is better) Translates to: IGPGTPRNHHADSWL*PLAKSWARETLHLV Trigger: AACCAGATGAAGCGTCTCACGGGCCCAGGACTTAGCAAGGGGCCAGAGCCAAGAATCAGCGTGATGATTTCTGGGGGTCCCTGGCCCAAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025211.6 |
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CDS-3UTR CAA 90 bp | TTTGAAAGTAGAAAGGCAGCCTCAGTCCCAGTACCCCATCGAGAGGTGGAGGGATGCTTTCGCCAGACGTaGCCCCATCTGGAAGGCCAC | + |
Preference number: 5 (lower is better) Translates to: FESRKAASVPVPHREVEGCFRQT*PHLEGH Trigger: GTGGCCTTCCAGATGGGGCAACGTCTGGCGAAAGCA...TCCCTCCACCTCTCGATGGGGTACTGGGACTGAGGCTGCCTTTCTACTTTCAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025211.6 |
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CDS CCA 90 bp | ACTGCCAGTTCTGAGAGCAGGTCTGGTCCAGGACATCTGTGTACGTaGATTCACTCAGCTCCTGCAATCCACTGGCGTCTGGAGTGTGAG | + |
Preference number: 5 (lower is better) Translates to: TASSESRSGPGHLCT*IHSAPAIHWRLECE Trigger: CTCACACTCCAGACGCCAGTGGATTGCAGGAGCTGAGTGAATCCACGTACACAGATGTCCTGGACCAGACCTGCTCTCAGAACTGGCAGT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025211.6 ENSMUST00000237462.2 |
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CDS-3UTR CAA 90 bp | GGTCAAGCACAAAAAGGCTCAGGACTTAAATGCAGCACTTTCGAGGCTGAGCAGGTCTTGGAGAGCCTATaGGGCCAGGGACCCCCAGAA | + |
Preference number: 5 (lower is better) Translates to: GQAQKGSGLKCSTFEAEQVLESL*GQGPPE Trigger: TTCTGGGGGTCCCTGGCCCAATAGGCTCTCCAAGAC...CTGCTCAGCCTCGAAAGTGCTGCATTTAAGTCCTGAGCCTTTTTGTGCTTGACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025211.6 |
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CDS CCA 90 bp | AGAAATCATCACGCTGATTCTTGGCTCTGGCCCCTTGCTAAGTCCTaGGCCCGTGAGACGCTTCATCTGGTTCACTTCATGAACTCCATA | + |
Preference number: 5 (lower is better) Translates to: RNHHADSWLWPLAKS*ARETLHLVHFMNSI Trigger: TATGGAGTTCATGAAGTGAACCAGATGAAGCGTCTCACGGGCCCAGGACTTAGCAAGGGGCCAGAGCCAAGAATCAGCGTGATGATTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025211.6 |
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CDS GCA 72 bp | TCTGGGCCAGGATCTCCTGTGAGCAGGGCCCATGGGTaGCCCCACAGAGCAGCGCCTCCAGATTCGCTTGGC | + |
Preference number: 6 (lower is better) Translates to: SGPGSPVSRAHG*PHRAAPPDSLG Trigger: GCCAAGCGAATCTGGAGGCGCTGCTCTGTGGGGGCACCCATGGGCCCTGCTCACAGGAGATCCTGGCCCAGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025211.6 ENSMUST00000237462.2 |
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CDS CCA 72 bp | GATTTAGCCTCTGCTTTCGCCAGACGTTGCCCCATCTaGAAGGCCACAGCCCGGCAGGCATCGCAGCGCAGG | + |
Preference number: 6 (lower is better) Translates to: DLASAFARRCPI*KATARQASQRR Trigger: CCTGCGCTGCGATGCCTGCCGGGCTGTGGCCTTCCAGATGGGGCAACGTCTGGCGAAAGCAGAGGCTAAATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025211.6 |
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CDS CAA 90 bp | ACTGGCGTCTGGAGTGTGAGATTTAGCCTCTGCTTTCGCCAGACGTaGCCCCATCTGGAAGGCCACAGCCCGGCAGGCATCGCAGCGCAG | + |
Preference number: 6 (lower is better) Translates to: TGVWSVRFSLCFRQT*PHLEGHSPAGIAAQ Trigger: CTGCGCTGCGATGCCTGCCGGGCTGTGGCCTTCCAGATGGGGCAACGTCTGGCGAAAGCAGAGGCTAAATCTCACACTCCAGACGCCAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025211.6 |
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CDS CAA 90 bp | GCAGGGCCCATGGGTGCCCCCACAGAGCAGCGCCTCCAGATTCGCTaGGCCTTGGCGGTAGGCTTCATAGATCTGGTCCTCTCCAAACTC | + |
Preference number: 6 (lower is better) Translates to: AGPMGAPTEQRLQIR*ALAVGFIDLVLSKL Trigger: GAGTTTGGAGAGGACCAGATCTATGAAGCCTACCGCCAAGGCCAAGCGAATCTGGAGGCGCTGCTCTGTGGGGGCACCCATGGGCCCTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025211.6 ENSMUST00000237462.2 |
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CDS CCA 72 bp | GGGCCAGGGACCCCCAGAAATCATCACGCTGATTCTTaGCTCTGGCCCCTTGCTAAGTCCTGGGCCCGTGAG | + |
Preference number: 6 (lower is better) Translates to: GPGTPRNHHADS*LWPLAKSWARE Trigger: CTCACGGGCCCAGGACTTAGCAAGGGGCCAGAGCCAAGAATCAGCGTGATGATTTCTGGGGGTCCCTGGCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025211.6 |
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CDS CAA 90 bp | CCCATGGGTGCCCCCACAGAGCAGCGCCTCCAGATTCGCTTGGCCTaGGCGGTAGGCTTCATAGATCTGGTCCTCTCCAAACTCACCCAG | + |
Preference number: 6 (lower is better) Translates to: PMGAPTEQRLQIRLA*AVGFIDLVLSKLTQ Trigger: CTGGGTGAGTTTGGAGAGGACCAGATCTATGAAGCCTACCGCCAAGGCCAAGCGAATCTGGAGGCGCTGCTCTGTGGGGGCACCCATGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025211.6 ENSMUST00000237462.2 |
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CDS CAA 72 bp | ATGGGTGCCCCCACAGAGCAGCGCCTCCAGATTCGCTaGGCCTTGGCGGTAGGCTTCATAGATCTGGTCCTC | + |
Preference number: 6 (lower is better) Translates to: MGAPTEQRLQIR*ALAVGFIDLVL Trigger: GAGGACCAGATCTATGAAGCCTACCGCCAAGGCCAAGCGAATCTGGAGGCGCTGCTCTGTGGGGGCACCCAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025211.6 ENSMUST00000237462.2 |
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CDS CCA 72 bp | GGGACCCCCAGAAATCATCACGCTGATTCTTGGCTCTaGCCCCTTGCTAAGTCCTGGGCCCGTGAGACGCTT | + |
Preference number: 6 (lower is better) Translates to: GTPRNHHADSWL*PLAKSWARETL Trigger: AAGCGTCTCACGGGCCCAGGACTTAGCAAGGGGCCAGAGCCAAGAATCAGCGTGATGATTTCTGGGGGTCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025211.6 |
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CDS CAA 72 bp | TGGAGTGTGAGATTTAGCCTCTGCTTTCGCCAGACGTaGCCCCATCTGGAAGGCCACAGCCCGGCAGGCATC | + |
Preference number: 6 (lower is better) Translates to: WSVRFSLCFRQT*PHLEGHSPAGI Trigger: GATGCCTGCCGGGCTGTGGCCTTCCAGATGGGGCAACGTCTGGCGAAAGCAGAGGCTAAATCTCACACTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025211.6 |
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CDS CAA 72 bp | GCCCCCACAGAGCAGCGCCTCCAGATTCGCTTGGCCTaGGCGGTAGGCTTCATAGATCTGGTCCTCTCCAAA | + |
Preference number: 6 (lower is better) Translates to: APTEQRLQIRLA*AVGFIDLVLSK Trigger: TTTGGAGAGGACCAGATCTATGAAGCCTACCGCCAAGGCCAAGCGAATCTGGAGGCGCTGCTCTGTGGGGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025211.6 ENSMUST00000237462.2 |
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CDS CAA 90 bp | CAGGGACCCCCAGAAATCATCACGCTGATTCTTGGCTCTGGCCCCTaGCTAAGTCCTGGGCCCGTGAGACGCTTCATCTGGTTCACTTCA | + |
Preference number: 6 (lower is better) Translates to: QGPPEIITLILGSGP*LSPGPVRRFIWFTS Trigger: TGAAGTGAACCAGATGAAGCGTCTCACGGGCCCAGGACTTAGCAAGGGGCCAGAGCCAAGAATCAGCGTGATGATTTCTGGGGGTCCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025211.6 |
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CDS CCA 72 bp | CACGCTGATTCTTGGCTCTGGCCCCTTGCTAAGTCCTaGGCCCGTGAGACGCTTCATCTGGTTCACTTCATG | + |
Preference number: 6 (lower is better) Translates to: HADSWLWPLAKS*ARETLHLVHFM Trigger: CATGAAGTGAACCAGATGAAGCGTCTCACGGGCCCAGGACTTAGCAAGGGGCCAGAGCCAAGAATCAGCGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025211.6 |
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CDS CAA 72 bp | CCAGAAATCATCACGCTGATTCTTGGCTCTGGCCCCTaGCTAAGTCCTGGGCCCGTGAGACGCTTCATCTGG | + |
Preference number: 6 (lower is better) Translates to: PEIITLILGSGP*LSPGPVRRFIW Trigger: CCAGATGAAGCGTCTCACGGGCCCAGGACTTAGCAAGGGGCCAGAGCCAAGAATCAGCGTGATGATTTCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025211.6 |
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CDS CCA 72 bp | CCTCTCCAAACTCACCCAGGTAGTGGAAACACGTCTTaGAGAGCCTATTGGGCCAGGGACCCCCAGAAATCA | + |
Preference number: 6 (lower is better) Translates to: PLQTHPGSGNTS*RAYWARDPQKS Trigger: TGATTTCTGGGGGTCCCTGGCCCAATAGGCTCTCCAAGACGTGTTTCCACTACCTGGGTGAGTTTGGAGAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025211.6 |
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CDS CCA 72 bp | CCTCTCCAAACTCACCCAGGTAGTGGAAACACGTCTTaGAGAGCGACTGCCAGTTCTGAGAGCAGGTCTGGT | + |
Preference number: 6 (lower is better) Translates to: PLQTHPGSGNTS*RATASSESRSG Trigger: ACCAGACCTGCTCTCAGAACTGGCAGTCGCTCTCCAAGACGTGTTTCCACTACCTGGGTGAGTTTGGAGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237462.2 |