RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MZB1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000024353

Ensembl transcript IDs: ENSMUST00000025211.6, ENSMUST00000237462.2

Found 32 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp GCTTTATTTGAAAGTAGAAAGGCAGCCTCAGTCCCAGTACCCCATCGAGAGGTGCCCCACCACCACAGTTaGAAAAATTATATAGGAGGG +
Preference number: 2 (lower is better)
Translates to: ALFESRKAASVPVPHREVPHHHS*KNYIGG
Trigger: CCCTCCTATATAATTTTTTCAACTGTGGTGGTGGGG...CACCTCTCGATGGGGTACTGGGACTGAGGCTGCCTTTCTACTTTCAAATAAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000025211.6
3UTR-3UTR GCA 90 bp TCAAAGCTTTATTTGAAAGTAGAAAGGCAGCCTCAGTCCCAGTACCCCATCGAGGGCTCAGGACTTAAATaGAGCACTTTCGAGGCTGAG +
Preference number: 2 (lower is better)
Translates to: SKLYLKVERQPQSQYPIEGSGLK*STFEAE
Trigger: CTCAGCCTCGAAAGTGCTGCATTTAAGTCCTGAGCC...CTCGATGGGGTACTGGGACTGAGGCTGCCTTTCTACTTTCAAATAAAGCTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025211.6
CDS-3UTR CCA 90 bp GGCAGCCTCAGTCCCAGTACCCCATCGAGAGGTGGAGGGAGAAGATTGACAGCTGCTGATTCTTGGCTCTaGCCCCTTGCTAAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: GSLSPSTPSRGGGRRLTAADSWL*PLAKSW
Trigger: CCAGGACTTAGCAAGGGGCCAGAGCCAAGAATCAGC...AGCTGTCAATCTTCTCCCTCCACCTCTCGATGGGGTACTGGGACTGAGGCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025211.6
CDS-3UTR TCA 90 bp AGGCAGCCTCAGTCCCAGTACCCCATCGAGAGGTGGAGGGAGAAGATTGACAGCCAGAAATCATCACGCTaGTTCTTGGCTCTGGCCCCT +
Preference number: 4 (lower is better)
Translates to: RQPQSQYPIERWREKIDSQKSSR*FLALAP
Trigger: AGGGGCCAGAGCCAAGAATCAGCGTGATGATTTCTG...GCTGTCAATCTTCTCCCTCCACCTCTCGATGGGGTACTGGGACTGAGGCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025211.6
CDS-3UTR GCA 90 bp CAAGCACAAAAAGGCTCAGGACTTAAATGCAGCACTTTCGAGGCTGAGCAGGATAGCAGGGCCCATGGGTaGCCCCACAGAGCAGCGCCT +
Preference number: 4 (lower is better)
Translates to: QAQKGSGLKCSTFEAEQDSRAHG*PHRAAP
Trigger: AGGCGCTGCTCTGTGGGGGCACCCATGGGCCCTGCT...ATCCTGCTCAGCCTCGAAAGTGCTGCATTTAAGTCCTGAGCCTTTTTGTGCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025211.6
CDS-3UTR CCA 90 bp AGCCTCAGTCCCAGTACCCCATCGAGAGGTGGAGGGAGAAGATTGACAGCTAGACTTCATCATCCAGTGTaGGAGCCGAAGCCGAGAGGG +
Preference number: 4 (lower is better)
Translates to: SLSPSTPSRGGGRRLTARLHHPV*EPKPRG
Trigger: CCCTCTCGGCTTCGGCTCCCACACTGGATGATGAAG...TCTAGCTGTCAATCTTCTCCCTCCACCTCTCGATGGGGTACTGGGACTGAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025211.6
CDS-3UTR CCA 90 bp CTTTATTTGAAAGTAGAAAGGCAGCCTCAGTCCCAGTACCCCATCGAGAGGTGGTGTGAGCAGGGCCCATaGGTGCCCCCACAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: LYLKVERQPQSQYPIERWCEQGP*VPPQSS
Trigger: GCTGCTCTGTGGGGGCACCCATGGGCCCTGCTCACA...CCACCTCTCGATGGGGTACTGGGACTGAGGCTGCCTTTCTACTTTCAAATAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025211.6
CDS-3UTR CCA 90 bp AGCCTCAGTCCCAGTACCCCATCGAGAGGTGGAGGGAGAAGATTGACAGCTAGACATCACGCTGATTCTTaGCTCTGGCCCCTTGCTAAG +
Preference number: 4 (lower is better)
Translates to: SLSPSTPSRGGGRRLTARHHADS*LWPLAK
Trigger: CTTAGCAAGGGGCCAGAGCCAAGAATCAGCGTGATG...TCTAGCTGTCAATCTTCTCCCTCCACCTCTCGATGGGGTACTGGGACTGAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025211.6
CDS-3UTR CCA 90 bp GCTTTATTTGAAAGTAGAAAGGCAGCCTCAGTCCCAGTACCCCATCGAGAGGTGTCTTGGAGAGCCTATTaGGCCAGGGACCCCCAGAAA +
Preference number: 4 (lower is better)
Translates to: ALFESRKAASVPVPHREVSWRAY*ARDPQK
Trigger: TTTCTGGGGGTCCCTGGCCCAATAGGCTCTCCAAGA...CACCTCTCGATGGGGTACTGGGACTGAGGCTGCCTTTCTACTTTCAAATAAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025211.6
CDS-3UTR GCA 90 bp GGTCAAGCACAAAAAGGCTCAGGACTTAAATGCAGCACTTTCGAGGCTGAGCAGGATTCACTCAGCTCCTaGAATCCACTGGCGTCTGGA +
Preference number: 4 (lower is better)
Translates to: GQAQKGSGLKCSTFEAEQDSLSS*NPLASG
Trigger: TCCAGACGCCAGTGGATTGCAGGAGCTGAGTGAATC...CTGCTCAGCCTCGAAAGTGCTGCATTTAAGTCCTGAGCCTTTTTGTGCTTGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025211.6
CDS-3UTR CAA 90 bp AGCCTCAGTCCCAGTACCCCATCGAGAGGTGGAGGGAGAAGATTGACAGCTAGACTTGGCTCTGGCCCCTaGCTAAGTCCTGGGCCCGTG +
Preference number: 5 (lower is better)
Translates to: SLSPSTPSRGGGRRLTARLGSGP*LSPGPV
Trigger: CACGGGCCCAGGACTTAGCAAGGGGCCAGAGCCAAG...TCTAGCTGTCAATCTTCTCCCTCCACCTCTCGATGGGGTACTGGGACTGAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025211.6
CDS CCA 90 bp GAGCCTATTGGGCCAGGGACCCCCAGAAATCATCACGCTGATTCTTaGCTCTGGCCCCTTGCTAAGTCCTGGGCCCGTGAGACGCTTCAT +
Preference number: 5 (lower is better)
Translates to: EPIGPGTPRNHHADS*LWPLAKSWARETLH
Trigger: ATGAAGCGTCTCACGGGCCCAGGACTTAGCAAGGGGCCAGAGCCAAGAATCAGCGTGATGATTTCTGGGGGTCCCTGGCCCAATAGGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025211.6
CDS CCA 90 bp ATTGGGCCAGGGACCCCCAGAAATCATCACGCTGATTCTTGGCTCTaGCCCCTTGCTAAGTCCTGGGCCCGTGAGACGCTTCATCTGGTT +
Preference number: 5 (lower is better)
Translates to: IGPGTPRNHHADSWL*PLAKSWARETLHLV
Trigger: AACCAGATGAAGCGTCTCACGGGCCCAGGACTTAGCAAGGGGCCAGAGCCAAGAATCAGCGTGATGATTTCTGGGGGTCCCTGGCCCAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025211.6
CDS-3UTR CAA 90 bp TTTGAAAGTAGAAAGGCAGCCTCAGTCCCAGTACCCCATCGAGAGGTGGAGGGATGCTTTCGCCAGACGTaGCCCCATCTGGAAGGCCAC +
Preference number: 5 (lower is better)
Translates to: FESRKAASVPVPHREVEGCFRQT*PHLEGH
Trigger: GTGGCCTTCCAGATGGGGCAACGTCTGGCGAAAGCA...TCCCTCCACCTCTCGATGGGGTACTGGGACTGAGGCTGCCTTTCTACTTTCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025211.6
CDS CCA 90 bp ACTGCCAGTTCTGAGAGCAGGTCTGGTCCAGGACATCTGTGTACGTaGATTCACTCAGCTCCTGCAATCCACTGGCGTCTGGAGTGTGAG +
Preference number: 5 (lower is better)
Translates to: TASSESRSGPGHLCT*IHSAPAIHWRLECE
Trigger: CTCACACTCCAGACGCCAGTGGATTGCAGGAGCTGAGTGAATCCACGTACACAGATGTCCTGGACCAGACCTGCTCTCAGAACTGGCAGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025211.6
ENSMUST00000237462.2
CDS-3UTR CAA 90 bp GGTCAAGCACAAAAAGGCTCAGGACTTAAATGCAGCACTTTCGAGGCTGAGCAGGTCTTGGAGAGCCTATaGGGCCAGGGACCCCCAGAA +
Preference number: 5 (lower is better)
Translates to: GQAQKGSGLKCSTFEAEQVLESL*GQGPPE
Trigger: TTCTGGGGGTCCCTGGCCCAATAGGCTCTCCAAGAC...CTGCTCAGCCTCGAAAGTGCTGCATTTAAGTCCTGAGCCTTTTTGTGCTTGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000025211.6
CDS CCA 90 bp AGAAATCATCACGCTGATTCTTGGCTCTGGCCCCTTGCTAAGTCCTaGGCCCGTGAGACGCTTCATCTGGTTCACTTCATGAACTCCATA +
Preference number: 5 (lower is better)
Translates to: RNHHADSWLWPLAKS*ARETLHLVHFMNSI
Trigger: TATGGAGTTCATGAAGTGAACCAGATGAAGCGTCTCACGGGCCCAGGACTTAGCAAGGGGCCAGAGCCAAGAATCAGCGTGATGATTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025211.6
CDS GCA 72 bp TCTGGGCCAGGATCTCCTGTGAGCAGGGCCCATGGGTaGCCCCACAGAGCAGCGCCTCCAGATTCGCTTGGC +
Preference number: 6 (lower is better)
Translates to: SGPGSPVSRAHG*PHRAAPPDSLG
Trigger: GCCAAGCGAATCTGGAGGCGCTGCTCTGTGGGGGCACCCATGGGCCCTGCTCACAGGAGATCCTGGCCCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025211.6
ENSMUST00000237462.2
CDS CCA 72 bp GATTTAGCCTCTGCTTTCGCCAGACGTTGCCCCATCTaGAAGGCCACAGCCCGGCAGGCATCGCAGCGCAGG +
Preference number: 6 (lower is better)
Translates to: DLASAFARRCPI*KATARQASQRR
Trigger: CCTGCGCTGCGATGCCTGCCGGGCTGTGGCCTTCCAGATGGGGCAACGTCTGGCGAAAGCAGAGGCTAAATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025211.6
CDS CAA 90 bp ACTGGCGTCTGGAGTGTGAGATTTAGCCTCTGCTTTCGCCAGACGTaGCCCCATCTGGAAGGCCACAGCCCGGCAGGCATCGCAGCGCAG +
Preference number: 6 (lower is better)
Translates to: TGVWSVRFSLCFRQT*PHLEGHSPAGIAAQ
Trigger: CTGCGCTGCGATGCCTGCCGGGCTGTGGCCTTCCAGATGGGGCAACGTCTGGCGAAAGCAGAGGCTAAATCTCACACTCCAGACGCCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025211.6
CDS CAA 90 bp GCAGGGCCCATGGGTGCCCCCACAGAGCAGCGCCTCCAGATTCGCTaGGCCTTGGCGGTAGGCTTCATAGATCTGGTCCTCTCCAAACTC +
Preference number: 6 (lower is better)
Translates to: AGPMGAPTEQRLQIR*ALAVGFIDLVLSKL
Trigger: GAGTTTGGAGAGGACCAGATCTATGAAGCCTACCGCCAAGGCCAAGCGAATCTGGAGGCGCTGCTCTGTGGGGGCACCCATGGGCCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000025211.6
ENSMUST00000237462.2
CDS CCA 72 bp GGGCCAGGGACCCCCAGAAATCATCACGCTGATTCTTaGCTCTGGCCCCTTGCTAAGTCCTGGGCCCGTGAG +
Preference number: 6 (lower is better)
Translates to: GPGTPRNHHADS*LWPLAKSWARE
Trigger: CTCACGGGCCCAGGACTTAGCAAGGGGCCAGAGCCAAGAATCAGCGTGATGATTTCTGGGGGTCCCTGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025211.6
CDS CAA 90 bp CCCATGGGTGCCCCCACAGAGCAGCGCCTCCAGATTCGCTTGGCCTaGGCGGTAGGCTTCATAGATCTGGTCCTCTCCAAACTCACCCAG +
Preference number: 6 (lower is better)
Translates to: PMGAPTEQRLQIRLA*AVGFIDLVLSKLTQ
Trigger: CTGGGTGAGTTTGGAGAGGACCAGATCTATGAAGCCTACCGCCAAGGCCAAGCGAATCTGGAGGCGCTGCTCTGTGGGGGCACCCATGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000025211.6
ENSMUST00000237462.2
CDS CAA 72 bp ATGGGTGCCCCCACAGAGCAGCGCCTCCAGATTCGCTaGGCCTTGGCGGTAGGCTTCATAGATCTGGTCCTC +
Preference number: 6 (lower is better)
Translates to: MGAPTEQRLQIR*ALAVGFIDLVL
Trigger: GAGGACCAGATCTATGAAGCCTACCGCCAAGGCCAAGCGAATCTGGAGGCGCTGCTCTGTGGGGGCACCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000025211.6
ENSMUST00000237462.2
CDS CCA 72 bp GGGACCCCCAGAAATCATCACGCTGATTCTTGGCTCTaGCCCCTTGCTAAGTCCTGGGCCCGTGAGACGCTT +
Preference number: 6 (lower is better)
Translates to: GTPRNHHADSWL*PLAKSWARETL
Trigger: AAGCGTCTCACGGGCCCAGGACTTAGCAAGGGGCCAGAGCCAAGAATCAGCGTGATGATTTCTGGGGGTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025211.6
CDS CAA 72 bp TGGAGTGTGAGATTTAGCCTCTGCTTTCGCCAGACGTaGCCCCATCTGGAAGGCCACAGCCCGGCAGGCATC +
Preference number: 6 (lower is better)
Translates to: WSVRFSLCFRQT*PHLEGHSPAGI
Trigger: GATGCCTGCCGGGCTGTGGCCTTCCAGATGGGGCAACGTCTGGCGAAAGCAGAGGCTAAATCTCACACTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025211.6
CDS CAA 72 bp GCCCCCACAGAGCAGCGCCTCCAGATTCGCTTGGCCTaGGCGGTAGGCTTCATAGATCTGGTCCTCTCCAAA +
Preference number: 6 (lower is better)
Translates to: APTEQRLQIRLA*AVGFIDLVLSK
Trigger: TTTGGAGAGGACCAGATCTATGAAGCCTACCGCCAAGGCCAAGCGAATCTGGAGGCGCTGCTCTGTGGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000025211.6
ENSMUST00000237462.2
CDS CAA 90 bp CAGGGACCCCCAGAAATCATCACGCTGATTCTTGGCTCTGGCCCCTaGCTAAGTCCTGGGCCCGTGAGACGCTTCATCTGGTTCACTTCA +
Preference number: 6 (lower is better)
Translates to: QGPPEIITLILGSGP*LSPGPVRRFIWFTS
Trigger: TGAAGTGAACCAGATGAAGCGTCTCACGGGCCCAGGACTTAGCAAGGGGCCAGAGCCAAGAATCAGCGTGATGATTTCTGGGGGTCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025211.6
CDS CCA 72 bp CACGCTGATTCTTGGCTCTGGCCCCTTGCTAAGTCCTaGGCCCGTGAGACGCTTCATCTGGTTCACTTCATG +
Preference number: 6 (lower is better)
Translates to: HADSWLWPLAKS*ARETLHLVHFM
Trigger: CATGAAGTGAACCAGATGAAGCGTCTCACGGGCCCAGGACTTAGCAAGGGGCCAGAGCCAAGAATCAGCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025211.6
CDS CAA 72 bp CCAGAAATCATCACGCTGATTCTTGGCTCTGGCCCCTaGCTAAGTCCTGGGCCCGTGAGACGCTTCATCTGG +
Preference number: 6 (lower is better)
Translates to: PEIITLILGSGP*LSPGPVRRFIW
Trigger: CCAGATGAAGCGTCTCACGGGCCCAGGACTTAGCAAGGGGCCAGAGCCAAGAATCAGCGTGATGATTTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025211.6
CDS CCA 72 bp CCTCTCCAAACTCACCCAGGTAGTGGAAACACGTCTTaGAGAGCCTATTGGGCCAGGGACCCCCAGAAATCA +
Preference number: 6 (lower is better)
Translates to: PLQTHPGSGNTS*RAYWARDPQKS
Trigger: TGATTTCTGGGGGTCCCTGGCCCAATAGGCTCTCCAAGACGTGTTTCCACTACCTGGGTGAGTTTGGAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025211.6
CDS CCA 72 bp CCTCTCCAAACTCACCCAGGTAGTGGAAACACGTCTTaGAGAGCGACTGCCAGTTCTGAGAGCAGGTCTGGT +
Preference number: 6 (lower is better)
Translates to: PLQTHPGSGNTS*RATASSESRSG
Trigger: ACCAGACCTGCTCTCAGAACTGGCAGTCGCTCTCCAAGACGTGTTTCCACTACCTGGGTGAGTTTGGAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237462.2