Pregenerated sensors for MYSM1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000062627Ensembl transcript IDs: ENSMUST00000075872.4
Found 176 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGTGGCCAATTGGGTGTCTTCAGTTGGCACAGAGCAGAGACAGAGTaGAGGCGTGCACAGGCTTTGTTGGCTTCTCTAGCGCCTTCCTTC | + |
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Preference number: 1 (lower is better) Translates to: GGQLGVFSWHRAETE*RRAQALLASLAPSF Trigger: GAAGGAAGGCGCTAGAGAAGCCAACAAAGCCTGTGCACGCCTCCACTCTGTCTCTGCTCTGTGCCAACTGAAGACACCCAATTGGCCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| 3UTR GCA 90 bp | ATTGGGTGTCTTCAGTTGGCACAGAGCAGAGACAGAGTGGAGGCGTaGACAGGCTTTGTTGGCTTCTCTAGCGCCTTCCTTCCGTCAGGA | + |
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Preference number: 1 (lower is better) Translates to: IGCLQLAQSRDRVEA*TGFVGFSSAFLPSG Trigger: TCCTGACGGAAGGAAGGCGCTAGAGAAGCCAACAAAGCCTGTGCACGCCTCCACTCTGTCTCTGCTCTGTGCCAACTGAAGACACCCAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| 3UTR CCA 90 bp | TGTCTGCCGGTGAACTTCAAGTGTGTCCACAAGCAGGTGGCCAATTaGGTGTCTTCAGTTGGCACAGAGCAGAGACAGAGTGGAGGCGTG | + |
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Preference number: 1 (lower is better) Translates to: CLPVNFKCVHKQVAN*VSSVGTEQRQSGGV Trigger: CACGCCTCCACTCTGTCTCTGCTCTGTGCCAACTGAAGACACCCAATTGGCCACCTGCTTGTGGACACACTTGAAGTTCACCGGCAGACA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| 3UTR CCA 90 bp | CCGCCTCCCATGGATGATCTAAGCCATACTGAGTTCTGGCTAGGATaGGAAGGACGAAGTTCAGATGTCCAGGCTTGTGACAGGAGGACC | + |
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Preference number: 1 (lower is better) Translates to: PPPMDDLSHTEFWLG*EGRSSDVQACDRRT Trigger: GGTCCTCCTGTCACAAGCCTGGACATCTGAACTTCGTCCTTCCCATCCTAGCCAGAACTCAGTATGGCTTAGATCATCCATGGGAGGCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| 3UTR TCA 90 bp | GACAGGAGGACCTGCAGTGCTCCTGGCTGGAGTGAAACAAACACCTaGGTGGTGGTAAGGGATGGAGAACACGGTCTGCATTTTTCCAAC | + |
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Preference number: 1 (lower is better) Translates to: DRRTCSAPGWSETNT*VVVRDGEHGLHFSN Trigger: GTTGGAAAAATGCAGACCGTGTTCTCCATCCCTTACCACCACTCAGGTGTTTGTTTCACTCCAGCCAGGAGCACTGCAGGTCCTCCTGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| 3UTR GCA 90 bp | AGAACCCAGGATAAAGAGACTCAGGCATTGCTGGTCCTCCACTTCTaGAAACACTGTTGGGAAGGGCGGTCTCTGTCTGTCTCTCTCTGT | + |
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Preference number: 1 (lower is better) Translates to: RTQDKETQALLVLHF*KHCWEGRSLSVSLC Trigger: ACAGAGAGAGACAGACAGAGACCGCCCTTCCCAACAGTGTTTGCAGAAGTGGAGGACCAGCAATGCCTGAGTCTCTTTATCCTGGGTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| 3UTR GCA 90 bp | CTTTCTCTGTCCTTAGAAACGAAGAGGCTAACGGTGCTTCCAGTCTaGATGCTACCAACCTCACCTAGCCCGAGAGGAACATTCTGTGGA | + |
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Preference number: 1 (lower is better) Translates to: LSLSLETKRLTVLPV*MLPTSPSPRGTFCG Trigger: TCCACAGAATGTTCCTCTCGGGCTAGGTGAGGTTGGTAGCATGCAGACTGGAAGCACCGTTAGCCTCTTCGTTTCTAAGGACAGAGAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| 3UTR CCA 90 bp | ACCAGATTAAGTGCCTTGCTGGTAAGTAGAAAAGGGAAATTTGGGTaGCCACCTCTCCTGCTGAGAAACCAACATAGGATGTCTGCCGGT | + |
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Preference number: 1 (lower is better) Translates to: TRLSALLVSRKGKFG*PPLLLRNQHRMSAG Trigger: ACCGGCAGACATCCTATGTTGGTTTCTCAGCAGGAGAGGTGGCCACCCAAATTTCCCTTTTCTACTTACCAGCAAGGCACTTAATCTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| 3UTR GCA 90 bp | TTCTTTAAATCACAGTGCCCAAATCAGATTCAGGTCACCTATGACTaGAGTCACTCCATCCAGTGCTGCCTCCCCCTTTGGCTACAACTA | + |
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Preference number: 1 (lower is better) Translates to: FFKSQCPNQIQVTYD*SHSIQCCLPLWLQL Trigger: TAGTTGTAGCCAAAGGGGGAGGCAGCACTGGATGGAGTGACTGCAGTCATAGGTGACCTGAATCTGATTTGGGCACTGTGATTTAAAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| 3UTR TCA 90 bp | CACCAGAACATATGGGAAGAAAGTGTGTGTAATGAGATGGCAAAGTaGGAAACAGTCCCTCTGAGAAAAAGCGGAGCTCGGTCATCTCCT | + |
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Preference number: 1 (lower is better) Translates to: HQNIWEESVCNEMAK*ETVPLRKSGARSSP Trigger: AGGAGATGACCGAGCTCCGCTTTTTCTCAGAGGGACTGTTTCTCACTTTGCCATCTCATTACACACACTTTCTTCCCATATGTTCTGGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| 3UTR CCA 90 bp | CTAACAAGCCAGCAGATAAATCAGAGTAGGAGCAACACTCAGGGCTaGATTAGCCTCAGCTACATAAGACAAACTTGGCCTAGAGAAAGC | + |
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Preference number: 1 (lower is better) Translates to: LTSQQINQSRSNTQG*ISLSYIRQTWPRES Trigger: GCTTTCTCTAGGCCAAGTTTGTCTTATGTAGCTGAGGCTAATCCAGCCCTGAGTGTTGCTCCTACTCTGATTTATCTGCTGGCTTGTTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| 3UTR TCA 90 bp | AATGTGTGTGCTCTTCTTGTGCTTCTGTGCAGGTGCTTTTCTCTATaGGTGTCACGTGACACCAGATTAAGTGCCTTGCTGGTAAGTAGA | + |
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Preference number: 1 (lower is better) Translates to: NVCALLVLLCRCFSL*VSRDTRLSALLVSR Trigger: TCTACTTACCAGCAAGGCACTTAATCTGGTGTCACGTGACACTCATAGAGAAAAGCACCTGCACAGAAGCACAAGAAGAGCACACACATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| 3UTR TCA 90 bp | CCCTTACCAAAGCTTAAGCAGATTAGGTTGAGAGCTCAGGATTCCTaGTTTTTGCTCTGGAGTCCTTGCACTTCCAGATTTCAAGAGGAT | + |
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Preference number: 1 (lower is better) Translates to: PLPKLKQIRLRAQDS*FLLWSPCTSRFQED Trigger: ATCCTCTTGAAATCTGGAAGTGCAAGGACTCCAGAGCAAAAATCAGGAATCCTGAGCTCTCAACCTAATCTGCTTAAGCTTTGGTAAGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| 3UTR GCA 90 bp | CAAACTTGGCCTAGAGAAAGCAAACGCCTTTTCTTTAAATCACAGTaGCCAAATCAGATTCAGGTCACCTATGACTGCAGTCACTCCATC | + |
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Preference number: 1 (lower is better) Translates to: QTWPRESKRLFFKSQ*PNQIQVTYDCSHSI Trigger: GATGGAGTGACTGCAGTCATAGGTGACCTGAATCTGATTTGGGCACTGTGATTTAAAGAAAAGGCGTTTGCTTTCTCTAGGCCAAGTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| 3UTR GCA 90 bp | TCCCCTTTGGACTCCTGTCTGAACATTACTAAGGATGCTCCCTTTTaGTGTGTTGGCATGCTGTTAGATTTATTAGTCAGTAGTTCTCAA | + |
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Preference number: 1 (lower is better) Translates to: SPLDSCLNITKDAPF*CVGMLLDLLVSSSQ Trigger: TTGAGAACTACTGACTAATAAATCTAACAGCATGCCAACACAGCAAAAGGGAGCATCCTTAGTAATGTTCAGACAGGAGTCCAAAGGGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| 3UTR CCA 90 bp | TATAGTGTACACAGTAAGATGAAGCACACACCGCAGACTGAAAATTaGTTCTTCTCCCCTTTGGACTCCTGTCTGAACATTACTAAGGAT | + |
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Preference number: 1 (lower is better) Translates to: YSVHSKMKHTPQTEN*FFSPLDSCLNITKD Trigger: ATCCTTAGTAATGTTCAGACAGGAGTCCAAAGGGGAGAAGAACCAATTTTCAGTCTGCGGTGTGTGCTTCATCTTACTGTGTACACTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| 3UTR CCA 90 bp | CACATTCAGTTTCAATATAACAAAACTGTTGCCAATAAGAAGGCCTaGACAGGGTCAAACACCAGTTCTCCAGCAAGCAGAAATATTCAC | + |
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Preference number: 1 (lower is better) Translates to: HIQFQYNKTVANKKA*TGSNTSSPASRNIH Trigger: GTGAATATTTCTGCTTGCTGGAGAACTGGTGTTTGACCCTGTCCAGGCCTTCTTATTGGCAACAGTTTTGTTATATTGAAACTGAATGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| 3UTR CCA 90 bp | AAGCTACTAGGAACCCTCAGACACAACAAAGCAGGTTATTTTCCCTaGAACTCACATGAATATATGACAGAAACAGCAAAGGACAAAAAT | + |
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Preference number: 1 (lower is better) Translates to: KLLGTLRHNKAGYFP*NSHEYMTETAKDKN Trigger: ATTTTTGTCCTTTGCTGTTTCTGTCATATATTCATGTGAGTTCCAGGGAAAATAACCTGCTTTGTTGTGTCTGAGGGTTCCTAGTAGCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| 3UTR GCA 90 bp | TACACATTAATTTTGCAATTACACGATCTTATAAAGTTCCAAAAGTaGAGCCTAACAAGCCAGCAGATAAATCAGAGTAGGAGCAACACT | + |
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Preference number: 1 (lower is better) Translates to: YTLILQLHDLIKFQK*SLTSQQINQSRSNT Trigger: AGTGTTGCTCCTACTCTGATTTATCTGCTGGCTTGTTAGGCTGCACTTTTGGAACTTTATAAGATCGTGTAATTGCAAAATTAATGTGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| 3UTR GCA 90 bp | ACAGAAAGGAATGAATTAATTGCTACTGACTTTTGTAGCCTTGTGTaGTTGAAGAGACAACAAGTGATAGAATTCAGCTCTTTGAATCTC | + |
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Preference number: 1 (lower is better) Translates to: TERNELIATDFCSLV*LKRQQVIEFSSLNL Trigger: GAGATTCAAAGAGCTGAATTCTATCACTTGTTGTCTCTTCAAGCACACAAGGCTACAAAAGTCAGTAGCAATTAATTCATTCCTTTCTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| 3UTR CAA 90 bp | AGTTGGCACAGAGCAGAGACAGAGTGGAGGCGTGCACAGGCTTTGTaGGCTTCTCTAGCGCCTTCCTTCCGTCAGGACTCAGCAATGTAC | + |
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Preference number: 2 (lower is better) Translates to: SWHRAETEWRRAQAL*ASLAPSFRQDSAMY Trigger: GTACATTGCTGAGTCCTGACGGAAGGAAGGCGCTAGAGAAGCCAACAAAGCCTGTGCACGCCTCCACTCTGTCTCTGCTCTGTGCCAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| 3UTR CAA 90 bp | TTCAGTTGGCACAGAGCAGAGACAGAGTGGAGGCGTGCACAGGCTTaGTTGGCTTCTCTAGCGCCTTCCTTCCGTCAGGACTCAGCAATG | + |
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Preference number: 2 (lower is better) Translates to: FSWHRAETEWRRAQA*LASLAPSFRQDSAM Trigger: CATTGCTGAGTCCTGACGGAAGGAAGGCGCTAGAGAAGCCAACAAAGCCTGTGCACGCCTCCACTCTGTCTCTGCTCTGTGCCAACTGAA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| 3UTR CAA 90 bp | ATGTCTGCCGGTGAACTTCAAGTGTGTCCACAAGCAGGTGGCCAATaGGGTGTCTTCAGTTGGCACAGAGCAGAGACAGAGTGGAGGCGT | + |
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Preference number: 2 (lower is better) Translates to: MSAGELQVCPQAGGQ*GVFSWHRAETEWRR Trigger: ACGCCTCCACTCTGTCTCTGCTCTGTGCCAACTGAAGACACCCAATTGGCCACCTGCTTGTGGACACACTTGAAGTTCACCGGCAGACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| 3UTR CAA 90 bp | ACTTCAAGTGTGTCCACAAGCAGGTGGCCAATTGGGTGTCTTCAGTaGGCACAGAGCAGAGACAGAGTGGAGGCGTGCACAGGCTTTGTT | + |
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Preference number: 2 (lower is better) Translates to: TSSVSTSRWPIGCLQ*AQSRDRVEACTGFV Trigger: AACAAAGCCTGTGCACGCCTCCACTCTGTCTCTGCTCTGTGCCAACTGAAGACACCCAATTGGCCACCTGCTTGTGGACACACTTGAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| 3UTR-3UTR TCA 90 bp | TACCAACCTCACCTAGCCCGAGAGGAACATTCTGTGGAGAAGCCTGGACCAATGGCACACACCGCAGACTaGAAATTGGTTCTTCTCCCC | + |
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Preference number: 2 (lower is better) Translates to: YQPHLAREEHSVEKPGPMAHTAD*KLVLLP Trigger: GGGGAGAAGAACCAATTTTCAGTCTGCGGTGTGTGC...CATTGGTCCAGGCTTCTCCACAGAATGTTCCTCTCGGGCTAGGTGAGGTTGGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| 3UTR CAA 90 bp | TTCATGCCCACTGCACAGCTTAGCATAGGCAGGGCTCTACCACTCTaGATTACCACTATGAGAACAAGGGCTCTCTCTTCCTTCTCACAT | + |
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Preference number: 2 (lower is better) Translates to: FMPTAQLSIGRALPL*ITTMRTRALSSFSH Trigger: ATGTGAGAAGGAAGAGAGAGCCCTTGTTCTCATAGTGGTAATCAAGAGTGGTAGAGCCCTGCCTATGCTAAGCTGTGCAGTGGGCATGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| 3UTR-3UTR TCA 90 bp | AAACTGTTGCCAATAAGAAGGCCTGGACAGGGTCAAACACCAGTTCTCCAGCAAGTGTACACAGTAAGATaGAGCACACACCGCAGACTG | + |
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Preference number: 2 (lower is better) Translates to: KLLPIRRPGQGQTPVLQQVYTVR*STHRRL Trigger: CAGTCTGCGGTGTGTGCTTCATCTTACTGTGTACAC...TTGCTGGAGAACTGGTGTTTGACCCTGTCCAGGCCTTCTTATTGGCAACAGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| 3UTR-3UTR TCA 90 bp | GTGCTCTTCTTGTGCTTCTGTGCAGGTGCTTTTCTCTATGAGTGTCACGTGACATGGAAGAGGTCAAAGTaGGCTAAAGTGCTTGGTGCC | + |
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Preference number: 2 (lower is better) Translates to: VLFLCFCAGAFLYECHVTWKRSK*AKVLGA Trigger: GGCACCAAGCACTTTAGCTCACTTTGACCTCTTCCA...TGTCACGTGACACTCATAGAGAAAAGCACCTGCACAGAAGCACAAGAAGAGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| 3UTR-3UTR GCA 90 bp | TACCAACCTCACCTAGCCCGAGAGGAACATTCTGTGGAGAAGCCTGGACCAATGAGGATTCCTGATTTTTaGTCTGGAGTCCTTGCACTT | + |
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Preference number: 2 (lower is better) Translates to: YQPHLAREEHSVEKPGPMRIPDF*SGVLAL Trigger: AAGTGCAAGGACTCCAGAGCAAAAATCAGGAATCCT...CATTGGTCCAGGCTTCTCCACAGAATGTTCCTCTCGGGCTAGGTGAGGTTGGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| 3UTR-3UTR CCA 90 bp | GTGCTCTTCTTGTGCTTCTGTGCAGGTGCTTTTCTCTATGAGTGTCACGTGACATGCTGCCTCCCCCTTTaGCTACAACTACAGCAAAAA | + |
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Preference number: 2 (lower is better) Translates to: VLFLCFCAGAFLYECHVTCCLPL*LQLQQK Trigger: TTTTTGCTGTAGTTGTAGCCAAAGGGGGAGGCAGCA...TGTCACGTGACACTCATAGAGAAAAGCACCTGCACAGAAGCACAAGAAGAGCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| 3UTR CAA 90 bp | TTATGCACCAATAAAAATAGAACCCAGGATAAAGAGACTCAGGCATaGCTGGTCCTCCACTTCTGCAAACACTGTTGGGAAGGGCGGTCT | + |
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Preference number: 2 (lower is better) Translates to: LCTNKNRTQDKETQA*LVLHFCKHCWEGRS Trigger: AGACCGCCCTTCCCAACAGTGTTTGCAGAAGTGGAGGACCAGCAATGCCTGAGTCTCTTTATCCTGGGTTCTATTTTTATTGGTGCATAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| 3UTR-3UTR CCA 90 bp | GCACTGGAGAGCTCCCTGACTCTGCTTCTGAGTTCTGGGATTAAAGGTGTGCACGCAGGTTATTTTCCCTaGAACTCACATGAATATATG | + |
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Preference number: 2 (lower is better) Translates to: ALESSLTLLLSSGIKGVHAGYFP*NSHEYM Trigger: CATATATTCATGTGAGTTCCAGGGAAAATAACCTGC...GTGCACACCTTTAATCCCAGAACTCAGAAGCAGAGTCAGGGAGCTCTCCAGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| 3UTR-3UTR GCA 90 bp | AGGCCTGGACAGGGTCAAACACCAGTTCTCCAGCAAGCAGAAATATTCACTAATTTTGTCACATGCTACTaGAATTGGACAGAGTTGGAG | + |
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Preference number: 2 (lower is better) Translates to: RPGQGQTPVLQQAEIFTNFVTCY*NWTELE Trigger: CTCCAACTCTGTCCAATTGCAGTAGCATGTGACAAA...ATTAGTGAATATTTCTGCTTGCTGGAGAACTGGTGTTTGACCCTGTCCAGGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| 3UTR-3UTR CCA 90 bp | AGGCCTGGACAGGGTCAAACACCAGTTCTCCAGCAAGCAGAAATATTCACTAATGTGTGTGTAATGAGATaGCAAAGTGAGAAACAGTCC | + |
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Preference number: 2 (lower is better) Translates to: RPGQGQTPVLQQAEIFTNVCVMR*QSEKQS Trigger: GGACTGTTTCTCACTTTGCCATCTCATTACACACAC...ATTAGTGAATATTTCTGCTTGCTGGAGAACTGGTGTTTGACCCTGTCCAGGCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| 3UTR-3UTR CCA 90 bp | GTGCTCTTCTTGTGCTTCTGTGCAGGTGCTTTTCTCTATGAGTGTCACGTGACACACCACCAGAACATATaGGAAGAAAGTGTGTGTAAT | + |
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Preference number: 2 (lower is better) Translates to: VLFLCFCAGAFLYECHVTHHQNI*EESVCN Trigger: ATTACACACACTTTCTTCCCATATGTTCTGGTGGTG...TGTCACGTGACACTCATAGAGAAAAGCACCTGCACAGAAGCACAAGAAGAGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| 3UTR-3UTR CCA 90 bp | GCATTTTTCCAACAACCCTCTCAGAACATAAACCATTCATCAGGTACAGTCTCATTCTGCAAACACTGTTaGGAAGGGCGGTCTCTGTCT | + |
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Preference number: 2 (lower is better) Translates to: AFFQQPSQNINHSSGTVSFCKHC*EGRSLS Trigger: AGACAGAGACCGCCCTTCCCAACAGTGTTTGCAGAA...TGAGACTGTACCTGATGAATGGTTTATGTTCTGAGAGGGTTGTTGGAAAAATGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| 3UTR-3UTR TCA 90 bp | GCATTTTTCCAACAACCCTCTCAGAACATAAACCATTCATCAGGTACAGTCTCAAATGAGATGGCAAAGTaGGAAACAGTCCCTCTGAGA | + |
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Preference number: 2 (lower is better) Translates to: AFFQQPSQNINHSSGTVSNEMAK*ETVPLR Trigger: TCTCAGAGGGACTGTTTCTCACTTTGCCATCTCATT...TGAGACTGTACCTGATGAATGGTTTATGTTCTGAGAGGGTTGTTGGAAAAATGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| 3UTR-3UTR GCA 90 bp | GAGAACACGGTCTGCATTTTTCCAACAACCCTCTCAGAACATAAACCATTCATCTTTTGTAGCCTTGTGTaGTTGAAGAGACAACAAGTG | + |
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Preference number: 2 (lower is better) Translates to: ENTVCIFPTTLSEHKPFIFCSLV*LKRQQV Trigger: CACTTGTTGTCTCTTCAAGCACACAAGGCTACAAAA...GATGAATGGTTTATGTTCTGAGAGGGTTGTTGGAAAAATGCAGACCGTGTTCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| 3UTR-3UTR GCA 90 bp | GAGAACACGGTCTGCATTTTTCCAACAACCCTCTCAGAACATAAACCATTCATCTTCTTTAAATCACAGTaGCCAAATCAGATTCAGGTC | + |
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Preference number: 2 (lower is better) Translates to: ENTVCIFPTTLSEHKPFIFFKSQ*PNQIQV Trigger: GACCTGAATCTGATTTGGGCACTGTGATTTAAAGAA...GATGAATGGTTTATGTTCTGAGAGGGTTGTTGGAAAAATGCAGACCGTGTTCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| 3UTR CAA 90 bp | AAAGAAAACTCTAAACTCACATTCAGTTTCAATATAACAAAACTGTaGCCAATAAGAAGGCCTGGACAGGGTCAAACACCAGTTCTCCAG | + |
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Preference number: 2 (lower is better) Translates to: KENSKLTFSFNITKL*PIRRPGQGQTPVLQ Trigger: CTGGAGAACTGGTGTTTGACCCTGTCCAGGCCTTCTTATTGGCAACAGTTTTGTTATATTGAAACTGAATGTGAGTTTAGAGTTTTCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| 3UTR GCA 72 bp | TGGCCTCGAACTCAGAAATTCGCCTGCCTCTGCCTCTaGCTCGGCCTCCCGAGTGCTGGGATTAAAGGCGTG | + |
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Preference number: 3 (lower is better) Translates to: WPRTQKFACLCL*LGLPSAGIKGV Trigger: CACGCCTTTAATCCCAGCACTCGGGAGGCCGAGGCAGAGGCAGAGGCAGGCGAATTTCTGAGTTCGAGGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| 3UTR CCA 72 bp | CAGGCATTGCTGGTCCTCCACTTCTGCAAACACTGTTaGGAAGGGCGGTCTCTGTCTGTCTCTCTCTGTCTC | + |
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Preference number: 3 (lower is better) Translates to: QALLVLHFCKHC*EGRSLSVSLCL Trigger: GAGACAGAGAGAGACAGACAGAGACCGCCCTTCCCAACAGTGTTTGCAGAAGTGGAGGACCAGCAATGCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| 3UTR TCA 72 bp | ACCTGCAGTGCTCCTGGCTGGAGTGAAACAAACACCTaGGTGGTGGTAAGGGATGGAGAACACGGTCTGCAT | + |
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Preference number: 3 (lower is better) Translates to: TCSAPGWSETNT*VVVRDGEHGLH Trigger: ATGCAGACCGTGTTCTCCATCCCTTACCACCACTCAGGTGTTTGTTTCACTCCAGCCAGGAGCACTGCAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| 3UTR GCA 72 bp | TCACAGTGCCCAAATCAGATTCAGGTCACCTATGACTaGAGTCACTCCATCCAGTGCTGCCTCCCCCTTTGG | + |
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Preference number: 3 (lower is better) Translates to: SQCPNQIQVTYD*SHSIQCCLPLW Trigger: CCAAAGGGGGAGGCAGCACTGGATGGAGTGACTGCAGTCATAGGTGACCTGAATCTGATTTGGGCACTGTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| 3UTR GCA 72 bp | TCCTTAGAAACGAAGAGGCTAACGGTGCTTCCAGTCTaGATGCTACCAACCTCACCTAGCCCGAGAGGAACA | + |
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Preference number: 3 (lower is better) Translates to: SLETKRLTVLPV*MLPTSPSPRGT Trigger: TGTTCCTCTCGGGCTAGGTGAGGTTGGTAGCATGCAGACTGGAAGCACCGTTAGCCTCTTCGTTTCTAAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| 3UTR-3UTR CAA 90 bp | GAGAACACGGTCTGCATTTTTCCAACAACCCTCTCAGAACATAAACCATTCATCCTCAGGAGGCCTAGGTaGGCCACCTACAGCTGCCAG | + |
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Preference number: 3 (lower is better) Translates to: ENTVCIFPTTLSEHKPFILRRPR*ATYSCQ Trigger: CTGGCAGCTGTAGGTGGCCAACCTAGGCCTCCTGAG...GATGAATGGTTTATGTTCTGAGAGGGTTGTTGGAAAAATGCAGACCGTGTTCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| 3UTR-3UTR CAA 90 bp | GCACTGGAGAGCTCCCTGACTCTGCTTCTGAGTTCTGGGATTAAAGGTGTGCACAGGGCTCTACCACTCTaGATTACCACTATGAGAACA | + |
|
Preference number: 3 (lower is better) Translates to: ALESSLTLLLSSGIKGVHRALPL*ITTMRT Trigger: TGTTCTCATAGTGGTAATCAAGAGTGGTAGAGCCCT...GTGCACACCTTTAATCCCAGAACTCAGAAGCAGAGTCAGGGAGCTCTCCAGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
||
| 3UTR TCA 72 bp | GTAGAAAAGGGAAATTTGGGTGGCCACCTCTCCTGCTaGGAAACCAACATAGGATGTCTGCCGGTGAACTTC | + |
|
Preference number: 3 (lower is better) Translates to: VEKGNLGGHLSC*ETNIGCLPVNF Trigger: GAAGTTCACCGGCAGACATCCTATGTTGGTTTCTCAGCAGGAGAGGTGGCCACCCAAATTTCCCTTTTCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
||
| 3UTR TCA 72 bp | GCTCTTCTTGTGCTTCTGTGCAGGTGCTTTTCTCTATaGGTGTCACGTGACACCAGATTAAGTGCCTTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: ALLVLLCRCFSL*VSRDTRLSALL Trigger: CAGCAAGGCACTTAATCTGGTGTCACGTGACACTCATAGAGAAAAGCACCTGCACAGAAGCACAAGAAGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
||
| 3UTR CCA 72 bp | AAAATAGAACCCAGGATAAAGAGACTCAGGCATTGCTaGTCCTCCACTTCTGCAAACACTGTTGGGAAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: KIEPRIKRLRHC*SSTSANTVGKG Trigger: GCCCTTCCCAACAGTGTTTGCAGAAGTGGAGGACCAGCAATGCCTGAGTCTCTTTATCCTGGGTTCTATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
||
| 3UTR CCA 72 bp | ATGGATGATCTAAGCCATACTGAGTTCTGGCTAGGATaGGAAGGACGAAGTTCAGATGTCCAGGCTTGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: MDDLSHTEFWLG*EGRSSDVQACD Trigger: GTCACAAGCCTGGACATCTGAACTTCGTCCTTCCCATCCTAGCCAGAACTCAGTATGGCTTAGATCATCCAT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
||
| 3UTR CCA 72 bp | AGTGCCTTGCTGGTAAGTAGAAAAGGGAAATTTGGGTaGCCACCTCTCCTGCTGAGAAACCAACATAGGATG | + |
|
Preference number: 3 (lower is better) Translates to: SALLVSRKGKFG*PPLLLRNQHRM Trigger: CATCCTATGTTGGTTTCTCAGCAGGAGAGGTGGCCACCCAAATTTCCCTTTTCTACTTACCAGCAAGGCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
||
| 3UTR TCA 72 bp | TCTCTGTCTCTGTCTCTCTCTCTCTCTCTCTCTCCATaGACTTCTGTGTTACATGTCCCCTCAAGTTCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: SLSLSLSLSLSP*TSVLHVPSSSR Trigger: TCTGGAACTTGAGGGGACATGTAACACAGAAGTTCATGGAGAGAGAGAGAGAGAGAGAGACAGAGACAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
||
| 3UTR CCA 72 bp | CAGCAGATAAATCAGAGTAGGAGCAACACTCAGGGCTaGATTAGCCTCAGCTACATAAGACAAACTTGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: QQINQSRSNTQG*ISLSYIRQTWP Trigger: AGGCCAAGTTTGTCTTATGTAGCTGAGGCTAATCCAGCCCTGAGTGTTGCTCCTACTCTGATTTATCTGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
||
| 3UTR-3UTR CAA 90 bp | AGGCCTGGACAGGGTCAAACACCAGTTCTCCAGCAAGCAGAAATATTCACTAATCACATGCTACTGCAATaGGACAGAGTTGGAGCTAAT | + |
|
Preference number: 3 (lower is better) Translates to: RPGQGQTPVLQQAEIFTNHMLLQ*DRVGAN Trigger: ATTAGCTCCAACTCTGTCCAATTGCAGTAGCATGTG...ATTAGTGAATATTTCTGCTTGCTGGAGAACTGGTGTTTGACCCTGTCCAGGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
||
| 3UTR-3UTR CAA 90 bp | AAACTGTTGCCAATAAGAAGGCCTGGACAGGGTCAAACACCAGTTCTCCAGCAATGCAATTGGACAGAGTaGGAGCTAATTATTTCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: KLLPIRRPGQGQTPVLQQCNWTE*ELIISL Trigger: AAGGGAAATAATTAGCTCCAACTCTGTCCAATTGCA...TTGCTGGAGAACTGGTGTTTGACCCTGTCCAGGCCTTCTTATTGGCAACAGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
||
| 3UTR TCA 72 bp | TGTGTAATGAGATGGCAAAGTGAGAAACAGTCCCTCTaGGAAAAAGCGGAGCTCGGTCATCTCCTAGTTATT | + |
|
Preference number: 3 (lower is better) Translates to: CVMRWQSEKQSL*EKAELGHLLVI Trigger: AATAACTAGGAGATGACCGAGCTCCGCTTTTTCTCAGAGGGACTGTTTCTCACTTTGCCATCTCATTACACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
||
| 3UTR GCA 72 bp | ATAAAAATAGAACCCAGGATAAAGAGACTCAGGCATTaGTGGTCCTCCACTTCTGCAAACACTGTTGGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: IKIEPRIKRLRH*WSSTSANTVGK Trigger: CTTCCCAACAGTGTTTGCAGAAGTGGAGGACCAGCAATGCCTGAGTCTCTTTATCCTGGGTTCTATTTTTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
||
| 3UTR TCA 72 bp | AAGCTTAAGCAGATTAGGTTGAGAGCTCAGGATTCCTaGTTTTTGCTCTGGAGTCCTTGCACTTCCAGATTT | + |
|
Preference number: 3 (lower is better) Translates to: KLKQIRLRAQDS*FLLWSPCTSRF Trigger: AAATCTGGAAGTGCAAGGACTCCAGAGCAAAAATCAGGAATCCTGAGCTCTCAACCTAATCTGCTTAAGCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
||
| 3UTR GCA 72 bp | CCTAGAGAAAGCAAACGCCTTTTCTTTAAATCACAGTaGCCAAATCAGATTCAGGTCACCTATGACTGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: PRESKRLFFKSQ*PNQIQVTYDCS Trigger: ACTGCAGTCATAGGTGACCTGAATCTGATTTGGGCACTGTGATTTAAAGAAAAGGCGTTTGCTTTCTCTAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
||
| 3UTR CCA 72 bp | TTTCAATATAACAAAACTGTTGCCAATAAGAAGGCCTaGACAGGGTCAAACACCAGTTCTCCAGCAAGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: FQYNKTVANKKA*TGSNTSSPASR Trigger: TCTGCTTGCTGGAGAACTGGTGTTTGACCCTGTCCAGGCCTTCTTATTGGCAACAGTTTTGTTATATTGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
||
| 3UTR CCA 72 bp | CAGGGCTGGATTAGCCTCAGCTACATAAGACAAACTTaGCCTAGAGAAAGCAAACGCCTTTTCTTTAAATCA | + |
|
Preference number: 3 (lower is better) Translates to: QGWISLSYIRQT*PRESKRLFFKS Trigger: TGATTTAAAGAAAAGGCGTTTGCTTTCTCTAGGCCAAGTTTGTCTTATGTAGCTGAGGCTAATCCAGCCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
||
| 3UTR-3UTR CAA 90 bp | GCATTTTTCCAACAACCCTCTCAGAACATAAACCATTCATCAGGTACAGTCTCATGTAGCCTTGTGTGCTaGAAGAGACAACAAGTGATA | + |
|
Preference number: 3 (lower is better) Translates to: AFFQQPSQNINHSSGTVSCSLVC*KRQQVI Trigger: TATCACTTGTTGTCTCTTCAAGCACACAAGGCTACA...TGAGACTGTACCTGATGAATGGTTTATGTTCTGAGAGGGTTGTTGGAAAAATGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
||
| 3UTR TCA 72 bp | TCTGTGGAGAAGCCTGGACCAATGCTAAACAATAAATaGCTGCAGGCATTTTCTGAATGGGTCTGTTTAATT | + |
|
Preference number: 3 (lower is better) Translates to: SVEKPGPMLNNK*LQAFSEWVCLI Trigger: AATTAAACAGACCCATTCAGAAAATGCCTGCAGTCATTTATTGTTTAGCATTGGTCCAGGCTTCTCCACAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
||
| 3UTR GCA 72 bp | GTTAAGTTTGTTAATGCTAACACAACAGAATGTGTGTaGTCTTCTTGTGCTTCTGTGCAGGTGCTTTTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: VKFVNANTTECV*SSCASVQVLFS Trigger: AGAGAAAAGCACCTGCACAGAAGCACAAGAAGAGCACACACATTCTGTTGTGTTAGCATTAACAAACTTAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
||
| 3UTR CCA 72 bp | CCAAGGTTAAACAATGGCCAGCGAGTTTTACCTTACTaGTCTTGTTCCACTGATTTTGCTTTCTTGAGTATT | + |
|
Preference number: 3 (lower is better) Translates to: PRLNNGQRVLPY*SCSTDFAFLSI Trigger: AATACTCAAGAAAGCAAAATCAGTGGAACAAGACCAGTAAGGTAAAACTCGCTGGCCATTGTTTAACCTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
||
| 3UTR TCA 72 bp | TATAAAGCTCTTGTACCTATGAGCTGTGAGAATGGATaGATAGATGAATATGAGGGTTTGACAGTAAAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: YKALVPMSCENG*IDEYEGLTVKG Trigger: TCCCTTTACTGTCAAACCCTCATATTCATCTATTCATCCATTCTCACAGCTCATAGGTACAAGAGCTTTATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
||
| 3UTR GCA 72 bp | AATGAATTAATTGCTACTGACTTTTGTAGCCTTGTGTaGTTGAAGAGACAACAAGTGATAGAATTCAGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: NELIATDFCSLV*LKRQQVIEFSS Trigger: AGAGCTGAATTCTATCACTTGTTGTCTCTTCAAGCACACAAGGCTACAAAAGTCAGTAGCAATTAATTCATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
||
| CDS-3UTR GCA 90 bp | GCCGCACACCACGAGGCAGAGCAGAGCTCAAGCTTTCATGCCCACTGCACAGCTTCTGGAGAAGGCGAGTaGTTGGCTTCCTCTCTTACT | + |
|
Preference number: 4 (lower is better) Translates to: AAHHEAEQSSSFHAHCTASGEGE*LASSLT Trigger: AGTAAGAGAGGAAGCCAAGCACTCGCCTTCTCCAGA...AGCTGTGCAGTGGGCATGAAAGCTTGAGCTCTGCTCTGCCTCGTGGTGTGCGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
||
| 3UTR CAA 72 bp | AGAGCAGAGACAGAGTGGAGGCGTGCACAGGCTTTGTaGGCTTCTCTAGCGCCTTCCTTCCGTCAGGACTCA | + |
|
Preference number: 4 (lower is better) Translates to: RAETEWRRAQAL*ASLAPSFRQDS Trigger: TGAGTCCTGACGGAAGGAAGGCGCTAGAGAAGCCAACAAAGCCTGTGCACGCCTCCACTCTGTCTCTGCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
||
| CDS-3UTR CCA 90 bp | TGCCCAAATCAGATTCAGGTCACCTATGACTGCAGTCACTCCATCCAGTGCTGCCCTCTCACAGGGCTCTaGAGAAGGCGAGTGCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: CPNQIQVTYDCSHSIQCCPLTGL*RRRVLG Trigger: GCCAAGCACTCGCCTTCTCCAGAGCCCTGTGAGAGG...GCAGCACTGGATGGAGTGACTGCAGTCATAGGTGACCTGAATCTGATTTGGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
||
| 3UTR CAA 72 bp | TCAGGCATTGCTGGTCCTCCACTTCTGCAAACACTGTaGGGAAGGGCGGTCTCTGTCTGTCTCTCTCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SGIAGPPLLQTL*GRAVSVCLSLS Trigger: AGACAGAGAGAGACAGACAGAGACCGCCCTTCCCAACAGTGTTTGCAGAAGTGGAGGACCAGCAATGCCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
||
| CDS-3UTR GCA 90 bp | TGCCCAAATCAGATTCAGGTCACCTATGACTGCAGTCACTCCATCCAGTGCTGCCTGGTATGCTGCTTCTaGATCCTTTCTGTCGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: CPNQIQVTYDCSHSIQCCLVCCF*ILSVGR Trigger: GCGGCCGACAGAAAGGATGCAGAAGCAGCATACCAG...GCAGCACTGGATGGAGTGACTGCAGTCATAGGTGACCTGAATCTGATTTGGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
||
| CDS-3UTR TCA 90 bp | CAAGCTTTCATGCCCACTGCACAGCTTAGCATAGGCAGGGCTCTACCACTCTTGGTCCACTTTACTGAATaGCTGGCTGGTTTTGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QAFMPTAQLSIGRALPLLVHFTE*LAGFAG Trigger: TCCTGCAAAACCAGCCAGTCATTCAGTAAAGTGGAC...CAAGAGTGGTAGAGCCCTGCCTATGCTAAGCTGTGCAGTGGGCATGAAAGCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
||
| CDS-3UTR TCA 90 bp | TACCAACCTCACCTAGCCCGAGAGGAACATTCTGTGGAGAAGCCTGGACCAATGCCTTGCTTCACATTCTaGAGAGACTCTCCTGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: YQPHLAREEHSVEKPGPMPCFTF*RDSPED Trigger: ATCTTCAGGAGAGTCTCTTCAGAATGTGAAGCAAGG...CATTGGTCCAGGCTTCTCCACAGAATGTTCCTCTCGGGCTAGGTGAGGTTGGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
||
| CDS-3UTR TCA 90 bp | TGCCCAAATCAGATTCAGGTCACCTATGACTGCAGTCACTCCATCCAGTGCTGCGCAGCTACTTTCACCTaGAATGGCTCCTGCTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CPNQIQVTYDCSHSIQCCAATFT*NGSCFS Trigger: AGAAAAGCAGGAGCCATTTCAGGTGAAAGTAGCTGC...GCAGCACTGGATGGAGTGACTGCAGTCATAGGTGACCTGAATCTGATTTGGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
||
| CDS-3UTR CCA 90 bp | TACCAACCTCACCTAGCCCGAGAGGAACATTCTGTGGAGAAGCCTGGACCAATGGTAGTGTTGCGATTTTaGTCCACCTTCGGCCAAATT | + |
|
Preference number: 4 (lower is better) Translates to: YQPHLAREEHSVEKPGPMVVLRF*STFGQI Trigger: AATTTGGCCGAAGGTGGACCAAAATCGCAACACTAC...CATTGGTCCAGGCTTCTCCACAGAATGTTCCTCTCGGGCTAGGTGAGGTTGGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
||
| CDS-3UTR CCA 90 bp | TACCAACCTCACCTAGCCCGAGAGGAACATTCTGTGGAGAAGCCTGGACCAATGACTCAGACTGTTACATaGTTCTGCTGCACAGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: YQPHLAREEHSVEKPGPMTQTVT*FCCTDF Trigger: GAAGTCTGTGCAGCAGAACCATGTAACAGTCTGAGT...CATTGGTCCAGGCTTCTCCACAGAATGTTCCTCTCGGGCTAGGTGAGGTTGGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
||
| CDS-3UTR TCA 90 bp | TACCAACCTCACCTAGCCCGAGAGGAACATTCTGTGGAGAAGCCTGGACCAATGGCTCACATCCAAAATTaGTTGCTCCTATCAACTCGA | + |
|
Preference number: 4 (lower is better) Translates to: YQPHLAREEHSVEKPGPMAHIQN*LLLSTR Trigger: TCGAGTTGATAGGAGCAATCAATTTTGGATGTGAGC...CATTGGTCCAGGCTTCTCCACAGAATGTTCCTCTCGGGCTAGGTGAGGTTGGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
||
| CDS-3UTR CCA 90 bp | CAAGCTTTCATGCCCACTGCACAGCTTAGCATAGGCAGGGCTCTACCACTCTTGAGCTCTTCTCCTTCATaGTTTTCCTCCTCAATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: QAFMPTAQLSIGRALPLLSSSPS*FSSSIW Trigger: CCAAATTGAGGAGGAAAACCATGAAGGAGAAGAGCT...CAAGAGTGGTAGAGCCCTGCCTATGCTAAGCTGTGCAGTGGGCATGAAAGCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
||
| 3UTR CAA 72 bp | CACACACCGCAGACTGAAAATTGGTTCTTCTCCCCTTaGGACTCCTGTCTGAACATTACTAAGGATGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: HTPQTENWFFSP*DSCLNITKDAP Trigger: GGGAGCATCCTTAGTAATGTTCAGACAGGAGTCCAAAGGGGAGAAGAACCAATTTTCAGTCTGCGGTGTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
||
| CDS-3UTR TCA 90 bp | AAACTGTTGCCAATAAGAAGGCCTGGACAGGGTCAAACACCAGTTCTCCAGCAAGGATCAAATGCAGGATaGGAATGGTACCACCCAATG | + |
|
Preference number: 4 (lower is better) Translates to: KLLPIRRPGQGQTPVLQQGSNAG*EWYHPM Trigger: CATTGGGTGGTACCATTCTCATCCTGCATTTGATCC...TTGCTGGAGAACTGGTGTTTGACCCTGTCCAGGCCTTCTTATTGGCAACAGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
||
| CDS-3UTR GCA 90 bp | CAAGCTTTCATGCCCACTGCACAGCTTAGCATAGGCAGGGCTCTACCACTCTTGTGGCCTGTTATATACTaGCTGCTCACATCCAAAATT | + |
|
Preference number: 4 (lower is better) Translates to: QAFMPTAQLSIGRALPLLWPVIY*LLTSKI Trigger: AATTTTGGATGTGAGCAGGCAGTATATAACAGGCCA...CAAGAGTGGTAGAGCCCTGCCTATGCTAAGCTGTGCAGTGGGCATGAAAGCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
||
| CDS-3UTR GCA 90 bp | GCACTGGAGAGCTCCCTGACTCTGCTTCTGAGTTCTGGGATTAAAGGTGTGCACTCCTCCACAGACAAATaGTCAAATGTTTGTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ALESSLTLLLSSGIKGVHSSTDK*SNVCPS Trigger: AGAAGGACAAACATTTGAGCATTTGTCTGTGGAGGA...GTGCACACCTTTAATCCCAGAACTCAGAAGCAGAGTCAGGGAGCTCTCCAGTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
||
| CDS-3UTR CCA 90 bp | TACCAACCTCACCTAGCCCGAGAGGAACATTCTGTGGAGAAGCCTGGACCAATGTTTTCCTCCTCAATTTaGCAAGGAGGCAAAAGCATT | + |
|
Preference number: 4 (lower is better) Translates to: YQPHLAREEHSVEKPGPMFSSSI*QGGKSI Trigger: AATGCTTTTGCCTCCTTGCCAAATTGAGGAGGAAAA...CATTGGTCCAGGCTTCTCCACAGAATGTTCCTCTCGGGCTAGGTGAGGTTGGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
||
| CDS-3UTR CCA 90 bp | GAGAACACGGTCTGCATTTTTCCAACAACCCTCTCAGAACATAAACCATTCATCACACCAGTTTCCCCATaGATCTCGGACCCTGCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: ENTVCIFPTTLSEHKPFITPVSP*ISDPAS Trigger: AGACGCAGGGTCCGAGATCCATGGGGAAACTGGTGT...GATGAATGGTTTATGTTCTGAGAGGGTTGTTGGAAAAATGCAGACCGTGTTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
||
| CDS-3UTR TCA 90 bp | AAACTGTTGCCAATAAGAAGGCCTGGACAGGGTCAAACACCAGTTCTCCAGCAATACTGTCCACTTTACTaGATGACTGGCTGGTTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: KLLPIRRPGQGQTPVLQQYCPLY*MTGWFC Trigger: GCAAAACCAGCCAGTCATTCAGTAAAGTGGACAGTA...TTGCTGGAGAACTGGTGTTTGACCCTGTCCAGGCCTTCTTATTGGCAACAGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
||
| CDS-3UTR TCA 90 bp | AAACTGTTGCCAATAAGAAGGCCTGGACAGGGTCAAACACCAGTTCTCCAGCAAGCTGCCAGAATTCTGTaGTGTTTGAGAAGTCAACTC | + |
|
Preference number: 4 (lower is better) Translates to: KLLPIRRPGQGQTPVLQQAARIL*CLRSQL Trigger: GAGTTGACTTCTCAAACATCACAGAATTCTGGCAGC...TTGCTGGAGAACTGGTGTTTGACCCTGTCCAGGCCTTCTTATTGGCAACAGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
||
| CDS-3UTR TCA 90 bp | CAAGCTTTCATGCCCACTGCACAGCTTAGCATAGGCAGGGCTCTACCACTCTTGAACTCGAGGTATGTATaGATCCGTCCAATACAATTA | + |
|
Preference number: 4 (lower is better) Translates to: QAFMPTAQLSIGRALPLLNSRYV*IRPIQL Trigger: TAATTGTATTGGACGGATTCATACATACCTCGAGTT...CAAGAGTGGTAGAGCCCTGCCTATGCTAAGCTGTGCAGTGGGCATGAAAGCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
||
| CDS-3UTR GCA 90 bp | CAAGCTTTCATGCCCACTGCACAGCTTAGCATAGGCAGGGCTCTACCACTCTTGACATCCAAAATTGATTaGTCCTATCAACTCGAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: QAFMPTAQLSIGRALPLLTSKID*SYQLEV Trigger: TACCTCGAGTTGATAGGAGCAATCAATTTTGGATGT...CAAGAGTGGTAGAGCCCTGCCTATGCTAAGCTGTGCAGTGGGCATGAAAGCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
||
| CDS-3UTR GCA 90 bp | GCATTTTTCCAACAACCCTCTCAGAACATAAACCATTCATCAGGTACAGTCTCAAAGCCCAATCACCTCTaGCATAGACACGTGGGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: AFFQQPSQNINHSSGTVSKPNHL*HRHVGV Trigger: CACGCCCACGTGTCTATGGCAGAGGTGATTGGGCTT...TGAGACTGTACCTGATGAATGGTTTATGTTCTGAGAGGGTTGTTGGAAAAATGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
||
| CDS-3UTR GCA 90 bp | TACCAACCTCACCTAGCCCGAGAGGAACATTCTGTGGAGAAGCCTGGACCAATGGTCCATTCTCTTCCTTaGTTTTGTAATTGGAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: YQPHLAREEHSVEKPGPMVHSLP*FCNWKG Trigger: TCCTTTCCAATTACAAAAGCAAGGAAGAGAATGGAC...CATTGGTCCAGGCTTCTCCACAGAATGTTCCTCTCGGGCTAGGTGAGGTTGGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
||
| CDS-3UTR GCA 90 bp | GCATTTTTCCAACAACCCTCTCAGAACATAAACCATTCATCAGGTACAGTCTCATTTCCACTTGAGTCCTaGCTCTCACAGGGCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: AFFQQPSQNINHSSGTVSFPLES*LSQGSG Trigger: TCCAGAGCCCTGTGAGAGGCAGGACTCAAGTGGAAA...TGAGACTGTACCTGATGAATGGTTTATGTTCTGAGAGGGTTGTTGGAAAAATGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
||
| CDS-3UTR GCA 90 bp | AGGCCTGGACAGGGTCAAACACCAGTTCTCCAGCAAGCAGAAATATTCACTAATGTTACATGGTTCTGCTaGACAGACTTCAAGGACCTT | + |
|
Preference number: 4 (lower is better) Translates to: RPGQGQTPVLQQAEIFTNVTWFC*TDFKDL Trigger: AAGGTCCTTGAAGTCTGTGCAGCAGAACCATGTAAC...ATTAGTGAATATTTCTGCTTGCTGGAGAACTGGTGTTTGACCCTGTCCAGGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
||
| CDS-3UTR CCA 90 bp | GAGAACACGGTCTGCATTTTTCCAACAACCCTCTCAGAACATAAACCATTCATCGAGAAGGCGAGTGCTTaGCTTCCTCTCTTACTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ENTVCIFPTTLSEHKPFIEKASA*LPLLLL Trigger: GAGAAGTAAGAGAGGAAGCCAAGCACTCGCCTTCTC...GATGAATGGTTTATGTTCTGAGAGGGTTGTTGGAAAAATGCAGACCGTGTTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS-3UTR CCA 90 bp | AAACTGTTGCCAATAAGAAGGCCTGGACAGGGTCAAACACCAGTTCTCCAGCAATTTCAAATAGCGTTCTaGTGTTTTAGTTTGGCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: KLLPIRRPGQGQTPVLQQFQIAF*CFSLAP Trigger: GGGCGCCAAACTAAAACACCAGAACGCTATTTGAAA...TTGCTGGAGAACTGGTGTTTGACCCTGTCCAGGCCTTCTTATTGGCAACAGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS-3UTR CCA 90 bp | TGCCCAAATCAGATTCAGGTCACCTATGACTGCAGTCACTCCATCCAGTGCTGCTTACAAGGTATCAGTTaGAAAGGATCAAGTGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: CPNQIQVTYDCSHSIQCCLQGIS*KGSSEL Trigger: AAGCTCACTTGATCCTTTCCAACTGATACCTTGTAA...GCAGCACTGGATGGAGTGACTGCAGTCATAGGTGACCTGAATCTGATTTGGGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS-3UTR GCA 90 bp | AGGCCTGGACAGGGTCAAACACCAGTTCTCCAGCAAGCAGAAATATTCACTAATTGTACTATCCTCTTCTaGCAGTCCATTCTCTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RPGQGQTPVLQQAEIFTNCTILF*QSILFL Trigger: AAGGAAGAGAATGGACTGGCAGAAGAGGATAGTACA...ATTAGTGAATATTTCTGCTTGCTGGAGAACTGGTGTTTGACCCTGTCCAGGCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS-3UTR GCA 90 bp | GAGAACACGGTCTGCATTTTTCCAACAACCCTCTCAGAACATAAACCATTCATCACTGTTACATGGTTCTaGTGCACAGACTTCAAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: ENTVCIFPTTLSEHKPFITVTWF*CTDFKD Trigger: GTCCTTGAAGTCTGTGCAGCAGAACCATGTAACAGT...GATGAATGGTTTATGTTCTGAGAGGGTTGTTGGAAAAATGCAGACCGTGTTCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS-3UTR GCA 90 bp | AGGCCTGGACAGGGTCAAACACCAGTTCTCCAGCAAGCAGAAATATTCACTAATTGGATTAGGATCAAATaGAGGATGAGAATGGTACCA | + |
|
Preference number: 4 (lower is better) Translates to: RPGQGQTPVLQQAEIFTNWIRIK*RMRMVP Trigger: TGGTACCATTCTCATCCTGCATTTGATCCTAATCCA...ATTAGTGAATATTTCTGCTTGCTGGAGAACTGGTGTTTGACCCTGTCCAGGCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS-3UTR CCA 90 bp | AGGCCTGGACAGGGTCAAACACCAGTTCTCCAGCAAGCAGAAATATTCACTAATTTTATCAAGTGGTTGTaGCCTGTTATATACTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RPGQGQTPVLQQAEIFTNFIKWL*PVIYCL Trigger: CAGGCAGTATATAACAGGCCACAACCACTTGATAAA...ATTAGTGAATATTTCTGCTTGCTGGAGAACTGGTGTTTGACCCTGTCCAGGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS-3UTR CCA 90 bp | AGGCCTGGACAGGGTCAAACACCAGTTCTCCAGCAAGCAGAAATATTCACTAATATTTTGCTCCTCCTCTaGAGAAGTAACTCTGGTATT | + |
|
Preference number: 4 (lower is better) Translates to: RPGQGQTPVLQQAEIFTNILLLL*RSNSGI Trigger: AATACCAGAGTTACTTCTCCAGAGGAGGAGCAAAAT...ATTAGTGAATATTTCTGCTTGCTGGAGAACTGGTGTTTGACCCTGTCCAGGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS-3UTR TCA 90 bp | GAGAACACGGTCTGCATTTTTCCAACAACCCTCTCAGAACATAAACCATTCATCTTCCCTTCTCCACGTTaGATCAAGATAGTGATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ENTVCIFPTTLSEHKPFIFPSPR*IKIVIL Trigger: CAAGATCACTATCTTGATTCAACGTGGAGAAGGGAA...GATGAATGGTTTATGTTCTGAGAGGGTTGTTGGAAAAATGCAGACCGTGTTCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS-3UTR GCA 90 bp | GAGAACACGGTCTGCATTTTTCCAACAACCCTCTCAGAACATAAACCATTCATCCTCTTCTTTTCTTCTTaGCATCTCCTCCACAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: ENTVCIFPTTLSEHKPFILFFSS*HLLHRQ Trigger: TTGTCTGTGGAGGAGATGGCAAGAAGAAAAGAAGAG...GATGAATGGTTTATGTTCTGAGAGGGTTGTTGGAAAAATGCAGACCGTGTTCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS-3UTR TCA 90 bp | GCATTTTTCCAACAACCCTCTCAGAACATAAACCATTCATCAGGTACAGTCTCACATCCAGCTCATCTGTaGTATCTACATCTTCATCGT | + |
|
Preference number: 4 (lower is better) Translates to: AFFQQPSQNINHSSGTVSHPAHL*YLHLHR Trigger: ACGATGAAGATGTAGATATCACAGATGAGCTGGATG...TGAGACTGTACCTGATGAATGGTTTATGTTCTGAGAGGGTTGTTGGAAAAATGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS-3UTR TCA 90 bp | GAGAACACGGTCTGCATTTTTCCAACAACCCTCTCAGAACATAAACCATTCATCAACACTAATTCCCACTaGGGTTCTTCTAACATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ENTVCIFPTTLSEHKPFINTNSH*GSSNIC Trigger: ACAGATGTTAGAAGAACCTCAGTGGGAATTAGTGTT...GATGAATGGTTTATGTTCTGAGAGGGTTGTTGGAAAAATGCAGACCGTGTTCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS-3UTR GCA 90 bp | AGGCCTGGACAGGGTCAAACACCAGTTCTCCAGCAAGCAGAAATATTCACTAATATAGACACGTGGGCGTaGAAATTCATTATTAAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: RPGQGQTPVLQQAEIFTNIDTWA*KFIIKS Trigger: ACTTTTAATAATGAATTTGCACGCCCACGTGTCTAT...ATTAGTGAATATTTCTGCTTGCTGGAGAACTGGTGTTTGACCCTGTCCAGGCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS-3UTR CCA 90 bp | GAGAACACGGTCTGCATTTTTCCAACAACCCTCTCAGAACATAAACCATTCATCTACTTTCACCTGAAATaGCTCCTGCTTTTCTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: ENTVCIFPTTLSEHKPFIYFHLK*LLLFFT Trigger: AGTGAAGAAAAGCAGGAGCCATTTCAGGTGAAAGTA...GATGAATGGTTTATGTTCTGAGAGGGTTGTTGGAAAAATGCAGACCGTGTTCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS-3UTR TCA 90 bp | GCATTTTTCCAACAACCCTCTCAGAACATAAACCATTCATCAGGTACAGTCTCATCTTTGTTTTTAACCTaGAGATCACTGCTGCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: AFFQQPSQNINHSSGTVSSLFLT*RSLLLF Trigger: GAAGAGCAGCAGTGATCTTCAGGTTAAAAACAAAGA...TGAGACTGTACCTGATGAATGGTTTATGTTCTGAGAGGGTTGTTGGAAAAATGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS-3UTR GCA 90 bp | GCATTTTTCCAACAACCCTCTCAGAACATAAACCATTCATCAGGTACAGTCTCAAGCAATTGGCTACTTTaGTCAGTGTTTTCCTTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: AFFQQPSQNINHSSGTVSSNWLL*SVFSLD Trigger: GTCTAAGGAAAACACTGAGCAAAGTAGCCAATTGCT...TGAGACTGTACCTGATGAATGGTTTATGTTCTGAGAGGGTTGTTGGAAAAATGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS-3UTR CCA 90 bp | GCATTTTTCCAACAACCCTCTCAGAACATAAACCATTCATCAGGTACAGTCTCAACTTTACTGAATGACTaGCTGGTTTTGCAGGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: AFFQQPSQNINHSSGTVSTLLND*LVLQEN Trigger: ATTCTCCTGCAAAACCAGCCAGTCATTCAGTAAAGT...TGAGACTGTACCTGATGAATGGTTTATGTTCTGAGAGGGTTGTTGGAAAAATGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| 3UTR CAA 72 bp | TCTAGTTCAATGACATTTTGTCACATGCTACTGCAATaGGACAGAGTTGGAGCTAATTATTTCCCTTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SSSMTFCHMLLQ*DRVGANYFPCE Trigger: TTCACAAGGGAAATAATTAGCTCCAACTCTGTCCAATTGCAGTAGCATGTGACAAAATGTCATTGAACTAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS GCA 90 bp | TTTCCCCATGGATCTCGGACCCTGCGTCTCCTCGTTCGCATAGACTaGAGGCGCCAGGCAAGCTGGTATGCTGCTTCTGCATCCTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: FPHGSRTLRLLVRID*RRQASWYAASASFL Trigger: CAGAAAGGATGCAGAAGCAGCATACCAGCTTGCCTGGCGCCTGCAGTCTATGCGAACGAGGAGACGCAGGGTCCGAGATCCATGGGGAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS GCA 90 bp | GCGTCTCCTCGTTCGCATAGACTGCAGGCGCCAGGCAAGCTGGTATaGTGCTTCTGCATCCTTTCTGTCGGCCGCTCGTACTTTATCAAG | + |
|
Preference number: 5 (lower is better) Translates to: ASPRSHRLQAPGKLV*CFCILSVGRSYFIK Trigger: CTTGATAAAGTACGAGCGGCCGACAGAAAGGATGCAGAAGCAGCATACCAGCTTGCCTGGCGCCTGCAGTCTATGCGAACGAGGAGACGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS GCA 90 bp | CGTTCGCATAGACTGCAGGCGCCAGGCAAGCTGGTATGCTGCTTCTaGATCCTTTCTGTCGGCCGCTCGTACTTTATCAAGTGGTTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: RSHRLQAPGKLVCCF*ILSVGRSYFIKWLW Trigger: CCACAACCACTTGATAAAGTACGAGCGGCCGACAGAAAGGATGCAGAAGCAGCATACCAGCTTGCCTGGCGCCTGCAGTCTATGCGAACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS GCA 90 bp | TCTCCTCGTTCGCATAGACTGCAGGCGCCAGGCAAGCTGGTATGCTaGTTCTGCATCCTTTCTGTCGGCCGCTCGTACTTTATCAAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SPRSHRLQAPGKLVC*FCILSVGRSYFIKW Trigger: CCACTTGATAAAGTACGAGCGGCCGACAGAAAGGATGCAGAAGCAGCATACCAGCTTGCCTGGCGCCTGCAGTCTATGCGAACGAGGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS-3UTR CAA 90 bp | CAAGCTTTCATGCCCACTGCACAGCTTAGCATAGGCAGGGCTCTACCACTCTTGGGAGAAGGCGAGTGCTaGGCTTCCTCTCTTACTTCT | + |
|
Preference number: 5 (lower is better) Translates to: QAFMPTAQLSIGRALPLLGEGEC*ASSLTS Trigger: AGAAGTAAGAGAGGAAGCCAAGCACTCGCCTTCTCC...CAAGAGTGGTAGAGCCCTGCCTATGCTAAGCTGTGCAGTGGGCATGAAAGCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS TCA 90 bp | TTCCTCCTCAATTTGGCAAGGAGGCAAAAGCATTTCATTTCCACTTaGGTCCTGCCTCTCACAGGGCTCTGGAGAAGGCGAGTGCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: FLLNLARRQKHFIST*VLPLTGLWRRRVLG Trigger: GCCAAGCACTCGCCTTCTCCAGAGCCCTGTGAGAGGCAGGACTCAAGTGGAAATGAAATGCTTTTGCCTCCTTGCCAAATTGAGGAGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS GCA 90 bp | TTTCCACTTGAGTCCTGCCTCTCACAGGGCTCTGGAGAAGGCGAGTaGTTGGCTTCCTCTCTTACTTCTCCTCTGTGTAGAGTGTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: FPLESCLSQGSGEGE*LASSLTSPLCRVCS Trigger: AGAACACACTCTACACAGAGGAGAAGTAAGAGAGGAAGCCAAGCACTCGCCTTCTCCAGAGCCCTGTGAGAGGCAGGACTCAAGTGGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS-3UTR CAA 90 bp | GCCGCACACCACGAGGCAGAGCAGAGCTCAAGCTTTCATGCCCACTGCACAGCTATCTATTTCAACTTCTaGTTCTGGTGGCTTAAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: AAHHEAEQSSSFHAHCTAIYFNF*FWWLKL Trigger: GAGCTTAAGCCACCAGAACAAGAAGTTGAAATAGAT...AGCTGTGCAGTGGGCATGAAAGCTTGAGCTCTGCTCTGCCTCGTGGTGTGCGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS-3UTR CAA 90 bp | GCCGCACACCACGAGGCAGAGCAGAGCTCAAGCTTTCATGCCCACTGCACAGCTAAGCAATTGGCTACTTaGCTCAGTGTTTTCCTTAGA | + |
|
Preference number: 5 (lower is better) Translates to: AAHHEAEQSSSFHAHCTAKQLAT*LSVFLR Trigger: TCTAAGGAAAACACTGAGCAAAGTAGCCAATTGCTT...AGCTGTGCAGTGGGCATGAAAGCTTGAGCTCTGCTCTGCCTCGTGGTGTGCGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS GCA 90 bp | TCAATTTGGCAAGGAGGCAAAAGCATTTCATTTCCACTTGAGTCCTaGCTCTCACAGGGCTCTGGAGAAGGCGAGTGCTTGGCTTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SIWQGGKSISFPLES*LSQGSGEGECLASS Trigger: AGAGGAAGCCAAGCACTCGCCTTCTCCAGAGCCCTGTGAGAGGCAGGACTCAAGTGGAAATGAAATGCTTTTGCCTCCTTGCCAAATTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS-3UTR CAA 90 bp | CAAGCTTTCATGCCCACTGCACAGCTTAGCATAGGCAGGGCTCTACCACTCTTGGTCCTTCTAAGTCTTTaGCATCACACCAGTTTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: QAFMPTAQLSIGRALPLLVLLSL*HHTSFP Trigger: GGGGAAACTGGTGTGATGCAAAAGACTTAGAAGGAC...CAAGAGTGGTAGAGCCCTGCCTATGCTAAGCTGTGCAGTGGGCATGAAAGCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS-3UTR CAA 90 bp | CAAGCTTTCATGCCCACTGCACAGCTTAGCATAGGCAGGGCTCTACCACTCTTGAATCTACCATGGCTTTaGATGACTTCTGCAGGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: QAFMPTAQLSIGRALPLLNLPWL*MTSAGC Trigger: ACAGCCTGCAGAAGTCATCAAAAGCCATGGTAGATT...CAAGAGTGGTAGAGCCCTGCCTATGCTAAGCTGTGCAGTGGGCATGAAAGCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS-3UTR CAA 90 bp | GCACTGGAGAGCTCCCTGACTCTGCTTCTGAGTTCTGGGATTAAAGGTGTGCACTCAGCGATGAAGCAATaGGCTACTTTGCTCAGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: ALESSLTLLLSSGIKGVHSAMKQ*ATLLSV Trigger: AACACTGAGCAAAGTAGCCAATTGCTTCATCGCTGA...GTGCACACCTTTAATCCCAGAACTCAGAAGCAGAGTCAGGGAGCTCTCCAGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS-3UTR CAA 90 bp | CAAGCTTTCATGCCCACTGCACAGCTTAGCATAGGCAGGGCTCTACCACTCTTGTGCTCACATCCAAAATaGATTGCTCCTATCAACTCG | + |
|
Preference number: 5 (lower is better) Translates to: QAFMPTAQLSIGRALPLLCSHPK*IAPINS Trigger: CGAGTTGATAGGAGCAATCAATTTTGGATGTGAGCA...CAAGAGTGGTAGAGCCCTGCCTATGCTAAGCTGTGCAGTGGGCATGAAAGCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS TCA 90 bp | AAGGTTTCTGAGGCCTGTGTCTGTGATACAGGATCCATCTCACACTaGAGTCCTGTACTCAGACTGTTACATGGTTCTGCTGCACAGACT | + |
|
Preference number: 5 (lower is better) Translates to: KVSEACVCDTGSISH*SPVLRLLHGSAAQT Trigger: AGTCTGTGCAGCAGAACCATGTAACAGTCTGAGTACAGGACTTCAGTGTGAGATGGATCCTGTATCACAGACACAGGCCTCAGAAACCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS-3UTR CAA 90 bp | CTAGTTATTAAGCCGCACACCACGAGGCAGAGCAGAGCTCAAGCTTTCATGCCCAAATTTAGCCAGTCCTaGTTCAAACAGCTCTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LVIKPHTTRQSRAQAFMPKFSQS*FKQLFL Trigger: GAGAAAGAGCTGTTTGAACAAGGACTGGCTAAATTT...GGGCATGAAAGCTTGAGCTCTGCTCTGCCTCGTGGTGTGCGGCTTAATAACTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS-3UTR CAA 90 bp | AAACTGTTGCCAATAAGAAGGCCTGGACAGGGTCAAACACCAGTTCTCCAGCAAAGTAGTGTTGCGATTTaGGTCCACCTTCGGCCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: KLLPIRRPGQGQTPVLQQSSVAI*VHLRPN Trigger: ATTTGGCCGAAGGTGGACCAAAATCGCAACACTACT...TTGCTGGAGAACTGGTGTTTGACCCTGTCCAGGCCTTCTTATTGGCAACAGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS-3UTR CAA 90 bp | AGGCCTGGACAGGGTCAAACACCAGTTCTCCAGCAAGCAGAAATATTCACTAATGCATTTCATTTCCACTaGAGTCCTGCCTCTCACAGG | + |
|
Preference number: 5 (lower is better) Translates to: RPGQGQTPVLQQAEIFTNAFHFH*SPASHR Trigger: CCTGTGAGAGGCAGGACTCAAGTGGAAATGAAATGC...ATTAGTGAATATTTCTGCTTGCTGGAGAACTGGTGTTTGACCCTGTCCAGGCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS-3UTR CAA 90 bp | CTAGTTATTAAGCCGCACACCACGAGGCAGAGCAGAGCTCAAGCTTTCATGCCCTACTTTATCAAGTGGTaGTGGCCTGTTATATACTGC | + |
|
Preference number: 5 (lower is better) Translates to: LVIKPHTTRQSRAQAFMPYFIKW*WPVIYC Trigger: GCAGTATATAACAGGCCACAACCACTTGATAAAGTA...GGGCATGAAAGCTTGAGCTCTGCTCTGCCTCGTGGTGTGCGGCTTAATAACTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS GCA 90 bp | GTCGGCCGCTCGTACTTTATCAAGTGGTTGTGGCCTGTTATATACTaGCTGCTCACATCCAAAATTGATTGCTCCTATCAACTCGAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: VGRSYFIKWLWPVIY*LLTSKIDCSYQLEV Trigger: TACCTCGAGTTGATAGGAGCAATCAATTTTGGATGTGAGCAGGCAGTATATAACAGGCCACAACCACTTGATAAAGTACGAGCGGCCGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS CCA 90 bp | TCTGGTGGCTTAAGCTCTTCTCCTTCATGGTTTTCCTCCTCAATTTaGCAAGGAGGCAAAAGCATTTCATTTCCACTTGAGTCCTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SGGLSSSPSWFSSSI*QGGKSISFPLESCL Trigger: GAGGCAGGACTCAAGTGGAAATGAAATGCTTTTGCCTCCTTGCCAAATTGAGGAGGAAAACCATGAAGGAGAAGAGCTTAAGCCACCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS CCA 90 bp | TTCTGCATCCTTTCTGTCGGCCGCTCGTACTTTATCAAGTGGTTGTaGCCTGTTATATACTGCCTGCTCACATCCAAAATTGATTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: FCILSVGRSYFIKWL*PVIYCLLTSKIDCS Trigger: GGAGCAATCAATTTTGGATGTGAGCAGGCAGTATATAACAGGCCACAACCACTTGATAAAGTACGAGCGGCCGACAGAAAGGATGCAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS-3UTR CAA 90 bp | GTGCTCTTCTTGTGCTTCTGTGCAGGTGCTTTTCTCTATGAGTGTCACGTGACAGTTTTCCTCCTCAATTaGGCAAGGAGGCAAAAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: VLFLCFCAGAFLYECHVTVFLLN*ARRQKH Trigger: ATGCTTTTGCCTCCTTGCCAAATTGAGGAGGAAAAC...TGTCACGTGACACTCATAGAGAAAAGCACCTGCACAGAAGCACAAGAAGAGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS-3UTR CAA 90 bp | CAAGCTTTCATGCCCACTGCACAGCTTAGCATAGGCAGGGCTCTACCACTCTTGAAACTCAGGAATCGCTaGCTTTTCTTCTTCTTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: QAFMPTAQLSIGRALPLLKLRNR*LFFFLN Trigger: ATTCAAGAAGAAGAAAAGCAAGCGATTCCTGAGTTT...CAAGAGTGGTAGAGCCCTGCCTATGCTAAGCTGTGCAGTGGGCATGAAAGCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS-3UTR CAA 90 bp | AAACTGTTGCCAATAAGAAGGCCTGGACAGGGTCAAACACCAGTTCTCCAGCAATGCTGCTCTTCTGAGTaGGTGTTTCTTTTTCCACAT | + |
|
Preference number: 5 (lower is better) Translates to: KLLPIRRPGQGQTPVLQQCCSSE*VFLFPH Trigger: ATGTGGAAAAAGAAACACCAACTCAGAAGAGCAGCA...TTGCTGGAGAACTGGTGTTTGACCCTGTCCAGGCCTTCTTATTGGCAACAGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS GCA 90 bp | GCCGCTCGTACTTTATCAAGTGGTTGTGGCCTGTTATATACTGCCTaGTCACATCCAAAATTGATTGCTCCTATCAACTCGAGGTATGTA | + |
|
Preference number: 5 (lower is better) Translates to: AARTLSSGCGLLYTA*SHPKLIAPINSRYV Trigger: TACATACCTCGAGTTGATAGGAGCAATCAATTTTGGATGTGAGCAGGCAGTATATAACAGGCCACAACCACTTGATAAAGTACGAGCGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS-3UTR CAA 90 bp | AAACTGTTGCCAATAAGAAGGCCTGGACAGGGTCAAACACCAGTTCTCCAGCAATTTCCCTTCTCCACGTaGAATCAAGATAGTGATCTT | + |
|
Preference number: 5 (lower is better) Translates to: KLLPIRRPGQGQTPVLQQFPFST*NQDSDL Trigger: AAGATCACTATCTTGATTCAACGTGGAGAAGGGAAA...TTGCTGGAGAACTGGTGTTTGACCCTGTCCAGGCCTTCTTATTGGCAACAGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
||
| CDS-3UTR CAA 90 bp | GTGCTCTTCTTGTGCTTCTGTGCAGGTGCTTTTCTCTATGAGTGTCACGTGACAGATCAAGTGAGCTTTTaGGAAGTTTTGAAGCTTTCG | + |
|
Preference number: 5 (lower is better) Translates to: VLFLCFCAGAFLYECHVTDQVSF*EVLKLS Trigger: CGAAAGCTTCAAAACTTCCAAAAAGCTCACTTGATC...TGTCACGTGACACTCATAGAGAAAAGCACCTGCACAGAAGCACAAGAAGAGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS-3UTR CAA 90 bp | GTGCTCTTCTTGTGCTTCTGTGCAGGTGCTTTTCTCTATGAGTGTCACGTGACAGAACAGATTTTCTATTaGAGTCAAGAACTCCTCAGC | + |
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Preference number: 5 (lower is better) Translates to: VLFLCFCAGAFLYECHVTEQIFY*SQELLS Trigger: GCTGAGGAGTTCTTGACTCAAATAGAAAATCTGTTC...TGTCACGTGACACTCATAGAGAAAAGCACCTGCACAGAAGCACAAGAAGAGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS TCA 90 bp | CAAGTGGTTGTGGCCTGTTATATACTGCCTGCTCACATCCAAAATTaGTTGCTCCTATCAACTCGAGGTATGTATGAATCCGTCCAATAC | + |
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Preference number: 5 (lower is better) Translates to: QVVVACYILPAHIQN*LLLSTRGMYESVQY Trigger: GTATTGGACGGATTCATACATACCTCGAGTTGATAGGAGCAATCAATTTTGGATGTGAGCAGGCAGTATATAACAGGCCACAACCACTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS TCA 90 bp | ATTTCTGAGCTTGAACATGCTTCTCCTTCACCTTGCTTCACATTCTaGAGAGACTCTCCTGAAGATTTAGCTAATGGACCTTCTTGGCAT | + |
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Preference number: 5 (lower is better) Translates to: ISELEHASPSPCFTF*RDSPEDLANGPSWH Trigger: ATGCCAAGAAGGTCCATTAGCTAAATCTTCAGGAGAGTCTCTTCAGAATGTGAAGCAAGGTGAAGGAGAAGCATGTTCAAGCTCAGAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS TCA 90 bp | TGCTCACATCCAAAATTGATTGCTCCTATCAACTCGAGGTATGTATaGATCCGTCCAATACAATTAACATCCCCACAGTTCTTCAGGCCA | + |
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Preference number: 5 (lower is better) Translates to: CSHPKLIAPINSRYV*IRPIQLTSPQFFRP Trigger: TGGCCTGAAGAACTGTGGGGATGTTAATTGTATTGGACGGATTCATACATACCTCGAGTTGATAGGAGCAATCAATTTTGGATGTGAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS TCA 90 bp | TGGAAAGGAACAGATTTTCTATTTGAGTCAAGAACTCCTCAGCGATaGAGCAATTGGCTACTTTGCTCAGTGTTTTCCTTAGACACTCCA | + |
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Preference number: 5 (lower is better) Translates to: WKGTDFLFESRTPQR*SNWLLCSVFSLDTP Trigger: TGGAGTGTCTAAGGAAAACACTGAGCAAAGTAGCCAATTGCTTCATCGCTGAGGAGTTCTTGACTCAAATAGAAAATCTGTTCCTTTCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS GCA 90 bp | TGGTTGTGGCCTGTTATATACTGCCTGCTCACATCCAAAATTGATTaGTCCTATCAACTCGAGGTATGTATGAATCCGTCCAATACAATT | + |
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Preference number: 5 (lower is better) Translates to: WLWPVIYCLLTSKID*SYQLEVCMNPSNTI Trigger: AATTGTATTGGACGGATTCATACATACCTCGAGTTGATAGGAGCAATCAATTTTGGATGTGAGCAGGCAGTATATAACAGGCCACAACCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS GCA 90 bp | AGGATTACTTCGATTATATGGACTAACAATCATTCCAATGAATTTTaGTCCTCCTCTGGAGAAGTAACTCTGGTATTTGGCTTGTGTGTC | + |
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Preference number: 5 (lower is better) Translates to: RITSIIWTNNHSNEF*SSSGEVTLVFGLCV Trigger: GACACACAAGCCAAATACCAGAGTTACTTCTCCAGAGGAGGAGCAAAATTCATTGGAATGATTGTTAGTCCATATAATCGAAGTAATCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS CCA 90 bp | GTACCATCAGGGCTAACTTCTTCACTTATAACCAAGCAGGTTATCTaGGAATATGGTAAAGGATTACTTCGATTATATGGACTAACAATC | + |
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Preference number: 5 (lower is better) Translates to: VPSGLTSSLITKQVI*EYGKGLLRLYGLTI Trigger: GATTGTTAGTCCATATAATCGAAGTAATCCTTTACCATATTCCCAGATAACCTGCTTGGTTATAAGTGAAGAAGTTAGCCCTGATGGTAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS GCA 72 bp | GGATCTCGGACCCTGCGTCTCCTCGTTCGCATAGACTaGAGGCGCCAGGCAAGCTGGTATGCTGCTTCTGCA | + |
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Preference number: 6 (lower is better) Translates to: GSRTLRLLVRID*RRQASWYAASA Trigger: TGCAGAAGCAGCATACCAGCTTGCCTGGCGCCTGCAGTCTATGCGAACGAGGAGACGCAGGGTCCGAGATCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS GCA 72 bp | CGTTCGCATAGACTGCAGGCGCCAGGCAAGCTGGTATaGTGCTTCTGCATCCTTTCTGTCGGCCGCTCGTAC | + |
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Preference number: 6 (lower is better) Translates to: RSHRLQAPGKLV*CFCILSVGRSY Trigger: GTACGAGCGGCCGACAGAAAGGATGCAGAAGCAGCATACCAGCTTGCCTGGCGCCTGCAGTCTATGCGAACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS GCA 72 bp | TCGCATAGACTGCAGGCGCCAGGCAAGCTGGTATGCTaGTTCTGCATCCTTTCTGTCGGCCGCTCGTACTTT | + |
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Preference number: 6 (lower is better) Translates to: SHRLQAPGKLVC*FCILSVGRSYF Trigger: AAAGTACGAGCGGCCGACAGAAAGGATGCAGAAGCAGCATACCAGCTTGCCTGGCGCCTGCAGTCTATGCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS GCA 72 bp | GAGTCCTGCCTCTCACAGGGCTCTGGAGAAGGCGAGTaGTTGGCTTCCTCTCTTACTTCTCCTCTGTGTAGA | + |
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Preference number: 6 (lower is better) Translates to: ESCLSQGSGEGE*LASSLTSPLCR Trigger: TCTACACAGAGGAGAAGTAAGAGAGGAAGCCAAGCACTCGCCTTCTCCAGAGCCCTGTGAGAGGCAGGACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS GCA 72 bp | AGACTGCAGGCGCCAGGCAAGCTGGTATGCTGCTTCTaGATCCTTTCTGTCGGCCGCTCGTACTTTATCAAG | + |
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Preference number: 6 (lower is better) Translates to: RLQAPGKLVCCF*ILSVGRSYFIK Trigger: CTTGATAAAGTACGAGCGGCCGACAGAAAGGATGCAGAAGCAGCATACCAGCTTGCCTGGCGCCTGCAGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS CAA 90 bp | CCACTTGAGTCCTGCCTCTCACAGGGCTCTGGAGAAGGCGAGTGCTaGGCTTCCTCTCTTACTTCTCCTCTGTGTAGAGTGTGTTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: PLESCLSQGSGEGEC*ASSLTSPLCRVCSS Trigger: GGAAGAACACACTCTACACAGAGGAGAAGTAAGAGAGGAAGCCAAGCACTCGCCTTCTCCAGAGCCCTGTGAGAGGCAGGACTCAAGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS GCA 72 bp | CAAGGAGGCAAAAGCATTTCATTTCCACTTGAGTCCTaGCTCTCACAGGGCTCTGGAGAAGGCGAGTGCTTG | + |
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Preference number: 6 (lower is better) Translates to: QGGKSISFPLES*LSQGSGEGECL Trigger: CAAGCACTCGCCTTCTCCAGAGCCCTGTGAGAGGCAGGACTCAAGTGGAAATGAAATGCTTTTGCCTCCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS CAA 90 bp | TTTCCTCCTCAATTTGGCAAGGAGGCAAAAGCATTTCATTTCCACTaGAGTCCTGCCTCTCACAGGGCTCTGGAGAAGGCGAGTGCTTGG | + |
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Preference number: 6 (lower is better) Translates to: FPPQFGKEAKAFHFH*SPASHRALEKASAW Trigger: CCAAGCACTCGCCTTCTCCAGAGCCCTGTGAGAGGCAGGACTCAAGTGGAAATGAAATGCTTTTGCCTCCTTGCCAAATTGAGGAGGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS TCA 72 bp | GAGGCCTGTGTCTGTGATACAGGATCCATCTCACACTaGAGTCCTGTACTCAGACTGTTACATGGTTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: EACVCDTGSISH*SPVLRLLHGSA Trigger: AGCAGAACCATGTAACAGTCTGAGTACAGGACTTCAGTGTGAGATGGATCCTGTATCACAGACACAGGCCTC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS CAA 72 bp | ATCCTTTCTGTCGGCCGCTCGTACTTTATCAAGTGGTaGTGGCCTGTTATATACTGCCTGCTCACATCCAAA | + |
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Preference number: 6 (lower is better) Translates to: ILSVGRSYFIKW*WPVIYCLLTSK Trigger: TTTGGATGTGAGCAGGCAGTATATAACAGGCCACAACCACTTGATAAAGTACGAGCGGCCGACAGAAAGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS CAA 90 bp | GCTCTTTCTCTTCTACTGTCCACTTTACTGAATGACTGGCTGGTTTaGCAGGAGAATCTACCATGGCTTTTGATGACTTCTGCAGGCTGT | + |
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Preference number: 6 (lower is better) Translates to: ALSLLLSTLLNDWLV*QENLPWLLMTSAGC Trigger: ACAGCCTGCAGAAGTCATCAAAAGCCATGGTAGATTCTCCTGCAAAACCAGCCAGTCATTCAGTAAAGTGGACAGTAGAAGAGAAAGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS GCA 72 bp | AGAAGCCCAATCACCTCTGCCATAGACACGTGGGCGTaGAAATTCATTATTAAAAGTGCTTCTGCAGCTACT | + |
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Preference number: 6 (lower is better) Translates to: RSPITSAIDTWA*KFIIKSASAAT Trigger: AGTAGCTGCAGAAGCACTTTTAATAATGAATTTGCACGCCCACGTGTCTATGGCAGAGGTGATTGGGCTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS CCA 72 bp | CTTTCTGTCGGCCGCTCGTACTTTATCAAGTGGTTGTaGCCTGTTATATACTGCCTGCTCACATCCAAAATT | + |
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Preference number: 6 (lower is better) Translates to: LSVGRSYFIKWL*PVIYCLLTSKI Trigger: AATTTTGGATGTGAGCAGGCAGTATATAACAGGCCACAACCACTTGATAAAGTACGAGCGGCCGACAGAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS CAA 72 bp | CAGACAAATGCTCAAATGTTTGTCCTTCTAAGTCTTTaGCATCACACCAGTTTCCCCATGGATCTCGGACCC | + |
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Preference number: 6 (lower is better) Translates to: QTNAQMFVLLSL*HHTSFPMDLGP Trigger: GGGTCCGAGATCCATGGGGAAACTGGTGTGATGCAAAAGACTTAGAAGGACAAACATTTGAGCATTTGTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS CAA 90 bp | CTCTTCACTTGTAAAACTGTGCGACTTTTAAGTAGTGTTGCGATTTaGGTCCACCTTCGGCCAAATTTAGCCAGTCCTTGTTCAAACAGC | + |
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Preference number: 6 (lower is better) Translates to: LFTCKTVRLLSSVAI*VHLRPNLASPCSNS Trigger: GCTGTTTGAACAAGGACTGGCTAAATTTGGCCGAAGGTGGACCAAAATCGCAACACTACTTAAAAGTCGCACAGTTTTACAAGTGAAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS GCA 72 bp | CCTGTTATATACTGCCTGCTCACATCCAAAATTGATTaGTCCTATCAACTCGAGGTATGTATGAATCCGTCC | + |
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Preference number: 6 (lower is better) Translates to: PVIYCLLTSKID*SYQLEVCMNPS Trigger: GGACGGATTCATACATACCTCGAGTTGATAGGAGCAATCAATTTTGGATGTGAGCAGGCAGTATATAACAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS CAA 72 bp | GAGTCCAAGGAAGACAGCCATTTTCCCTTCTCCACGTaGAATCAAGATAGTGATCTTGAAAAACTGATGCTG | + |
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Preference number: 6 (lower is better) Translates to: ESKEDSHFPFST*NQDSDLEKLML Trigger: CAGCATCAGTTTTTCAAGATCACTATCTTGATTCAACGTGGAGAAGGGAAAATGGCTGTCTTCCTTGGACTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS CAA 72 bp | CTTCTACTGTCCACTTTACTGAATGACTGGCTGGTTTaGCAGGAGAATCTACCATGGCTTTTGATGACTTCT | + |
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Preference number: 6 (lower is better) Translates to: LLLSTLLNDWLV*QENLPWLLMTS Trigger: AGAAGTCATCAAAAGCCATGGTAGATTCTCCTGCAAAACCAGCCAGTCATTCAGTAAAGTGGACAGTAGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS CAA 72 bp | TGTAAAACTGTGCGACTTTTAAGTAGTGTTGCGATTTaGGTCCACCTTCGGCCAAATTTAGCCAGTCCTTGT | + |
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Preference number: 6 (lower is better) Translates to: CKTVRLLSSVAI*VHLRPNLASPC Trigger: ACAAGGACTGGCTAAATTTGGCCGAAGGTGGACCAAAATCGCAACACTACTTAAAAGTCGCACAGTTTTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS GCA 72 bp | ACTTTATCAAGTGGTTGTGGCCTGTTATATACTGCCTaGTCACATCCAAAATTGATTGCTCCTATCAACTCG | + |
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Preference number: 6 (lower is better) Translates to: TLSSGCGLLYTA*SHPKLIAPINS Trigger: CGAGTTGATAGGAGCAATCAATTTTGGATGTGAGCAGGCAGTATATAACAGGCCACAACCACTTGATAAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS CAA 90 bp | TGTCAGTACTTTTCTGTTTTTCAGCCCATGATGCAATTTCTGAGCTaGAACATGCTTCTCCTTCACCTTGCTTCACATTCTGAAGAGACT | + |
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Preference number: 6 (lower is better) Translates to: CQYFSVFQPMMQFLS*NMLLLHLASHSEET Trigger: AGTCTCTTCAGAATGTGAAGCAAGGTGAAGGAGAAGCATGTTCAAGCTCAGAAATTGCATCATGGGCTGAAAAACAGAAAAGTACTGACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS TCA 72 bp | TCTAAAGTAAGATGGCTGCCAGAATTCTGTGATGTTTaGGAAGTCAACTCATCCAGCTCATCTGTGATATCT | + |
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Preference number: 6 (lower is better) Translates to: SKVRWLPEFCDV*EVNSSSSSVIS Trigger: AGATATCACAGATGAGCTGGATGAGTTGACTTCTCAAACATCACAGAATTCTGGCAGCCATCTTACTTTAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS TCA 72 bp | CCAAAATTGATTGCTCCTATCAACTCGAGGTATGTATaGATCCGTCCAATACAATTAACATCCCCACAGTTC | + |
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Preference number: 6 (lower is better) Translates to: PKLIAPINSRYV*IRPIQLTSPQF Trigger: GAACTGTGGGGATGTTAATTGTATTGGACGGATTCATACATACCTCGAGTTGATAGGAGCAATCAATTTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS GCA 72 bp | TCGTACTTTATCAAGTGGTTGTGGCCTGTTATATACTaGCTGCTCACATCCAAAATTGATTGCTCCTATCAA | + |
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Preference number: 6 (lower is better) Translates to: SYFIKWLWPVIY*LLTSKIDCSYQ Trigger: TTGATAGGAGCAATCAATTTTGGATGTGAGCAGGCAGTATATAACAGGCCACAACCACTTGATAAAGTACGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS TCA 72 bp | GTGATGTTTGAGAAGTCAACTCATCCAGCTCATCTGTaGTATCTACATCTTCATCGTCAGATAACTTCTCAA | + |
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Preference number: 6 (lower is better) Translates to: VMFEKSTHPAHL*YLHLHRQITSQ Trigger: TTGAGAAGTTATCTGACGATGAAGATGTAGATATCACAGATGAGCTGGATGAGTTGACTTCTCAAACATCAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS GCA 72 bp | TCGATTATATGGACTAACAATCATTCCAATGAATTTTaGTCCTCCTCTGGAGAAGTAACTCTGGTATTTGGC | + |
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Preference number: 6 (lower is better) Translates to: SIIWTNNHSNEF*SSSGEVTLVFG Trigger: GCCAAATACCAGAGTTACTTCTCCAGAGGAGGAGCAAAATTCATTGGAATGATTGTTAGTCCATATAATCGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS CCA 72 bp | GGGCTAACTTCTTCACTTATAACCAAGCAGGTTATCTaGGAATATGGTAAAGGATTACTTCGATTATATGGA | + |
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Preference number: 6 (lower is better) Translates to: GLTSSLITKQVI*EYGKGLLRLYG Trigger: TCCATATAATCGAAGTAATCCTTTACCATATTCCCAGATAACCTGCTTGGTTATAAGTGAAGAAGTTAGCCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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| CDS CAA 90 bp | TCTCTTACTTCTCCTCTGTGTAGAGTGTGTTCTTCCACCACTTTATaGTATTTCTCATTTAATTCGGCTGAGTTTTTGTCAGTACTTTTC | + |
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Preference number: 6 (lower is better) Translates to: SLTSPLCRVCSSTTL*YFSFNSAEFLSVLF Trigger: GAAAAGTACTGACAAAAACTCAGCCGAATTAAATGAGAAATACAATAAAGTGGTGGAAGAACACACTCTACACAGAGGAGAAGTAAGAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075872.4 |
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