Pregenerated sensors for MYRIP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041794Ensembl transcript IDs: ENSMUST00000048121.13, ENSMUST00000133173.3, ENSMUST00000214784.2
Found 247 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCCCTCCCAGGCCCTCGCCTCAGTGGAAATCCACACAGTACTCGATaGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGG | + |
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Preference number: 1 (lower is better) Translates to: ALPGPRLSGNPHSTR*LLGQGTVVYGRRQW Trigger: CCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTGTGGATTTCCACTGAGGCGAGGGCCTGGGAGGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| 3UTR CCA 90 bp | CAGAGAGTGGGCGAGACCTCAGTGTTGCGGGCTGAGACGGCCTTCTaGGTGAGGTATCAAGACAGCCCGGTGCAGCAGTGCACTGCAGCC | + |
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Preference number: 1 (lower is better) Translates to: QRVGETSVLRAETAF*VRYQDSPVQQCTAA Trigger: GGCTGCAGTGCACTGCTGCACCGGGCTGTCTTGATACCTCACCCAGAAGGCCGTCTCAGCCCGCAACACTGAGGTCTCGCCCACTCTCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| 3UTR TCA 90 bp | TGGGAGCCTAAGGCAGAGAGTGGGCGAGACCTCAGTGTTGCGGGCTaGGACGGCCTTCTGGGTGAGGTATCAAGACAGCCCGGTGCAGCA | + |
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Preference number: 1 (lower is better) Translates to: WEPKAESGRDLSVAG*DGLLGEVSRQPGAA Trigger: TGCTGCACCGGGCTGTCTTGATACCTCACCCAGAAGGCCGTCTCAGCCCGCAACACTGAGGTCTCGCCCACTCTCTGCCTTAGGCTCCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| 3UTR CCA 90 bp | CAGGCCCTCGCCTCAGTGGAAATCCACACAGTACTCGATGGCTGTTaGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTG | + |
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Preference number: 1 (lower is better) Translates to: QALASVEIHTVLDGC*VKALSCTAGGSGSL Trigger: CAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTGTGGATTTCCACTGAGGCGAGGGCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| 3UTR CCA 90 bp | AGAACCAGAGAACTTGGAAGTGAAGACAGGGCTGGCTTCTGGGGGTaGGGGGCACTCCAGTTAGAACCAGCTCACACGCCTGGCTTCAGC | + |
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Preference number: 1 (lower is better) Translates to: RTRELGSEDRAGFWG*GALQLEPAHTPGFS Trigger: GCTGAAGCCAGGCGTGTGAGCTGGTTCTAACTGGAGTGCCCCCCACCCCCAGAAGCCAGCCCTGTCTTCACTTCCAAGTTCTCTGGTTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| 3UTR CCA 90 bp | AGCAGGAGCATCATAGGAAGACACAAGGACCCCCATCAGCAGCAATaGCAAACAAGGAGGGAGGACACAGGGAGGACACAGGGAGGACAC | + |
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Preference number: 1 (lower is better) Translates to: SRSIIGRHKDPHQQQ*QTRREDTGRTQGGH Trigger: GTGTCCTCCCTGTGTCCTCCCTGTGTCCTCCCTCCTTGTTTGCCATTGCTGCTGATGGGGGTCCTTGTGTCTTCCTATGATGCTCCTGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| 3UTR CCA 90 bp | CTGCTATTGGAAGCCAGCATCTGGATATTCGGTCTCAAATTCCCTTaGGAGCCTAAGGCAGAGAGTGGGCGAGACCTCAGTGTTGCGGGC | + |
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Preference number: 1 (lower is better) Translates to: LLLEASIWIFGLKFP*EPKAESGRDLSVAG Trigger: GCCCGCAACACTGAGGTCTCGCCCACTCTCTGCCTTAGGCTCCCAAGGGAATTTGAGACCGAATATCCAGATGCTGGCTTCCAATAGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| 3UTR TCA 90 bp | AGGGAGGACACAGGGAGGACACAGGGAGGGCGGTTCAATCCAATCTaGGGATGCATAGGAGAACCAGAGAACTTGGAAGTGAAGACAGGG | + |
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Preference number: 1 (lower is better) Translates to: REDTGRTQGGRFNPI*GCIGEPENLEVKTG Trigger: CCCTGTCTTCACTTCCAAGTTCTCTGGTTCTCCTATGCATCCTCAGATTGGATTGAACCGCCCTCCCTGTGTCCTCCCTGTGTCCTCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| 3UTR TCA 90 bp | TTGGCCGTGGTCGTTTCTCTTGACAGTGATTCTTGGCCGAGTGTGTaGGACATGAAGGCATCGAGAAGCCGTCAGAGATCGCATCCTTCC | + |
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Preference number: 1 (lower is better) Translates to: LAVVVSLDSDSWPSV*DMKASRSRQRSHPS Trigger: GGAAGGATGCGATCTCTGACGGCTTCTCGATGCCTTCATGTCTCACACACTCGGCCAAGAATCACTGTCAAGAGAAACGACCACGGCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| 3UTR TCA 90 bp | TGGTCGTTTCTCTTGACAGTGATTCTTGGCCGAGTGTGTGAGACATaGAGGCATCGAGAAGCCGTCAGAGATCGCATCCTTCCTGTCCTC | + |
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Preference number: 1 (lower is better) Translates to: WSFLLTVILGRVCET*RHREAVRDRILPVL Trigger: GAGGACAGGAAGGATGCGATCTCTGACGGCTTCTCGATGCCTTCATGTCTCACACACTCGGCCAAGAATCACTGTCAAGAGAAACGACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| 3UTR CCA 90 bp | CAGGCACCCAGCGAGACCAGCATGGGGTCAGTCTTATTGTGTGCATaGACACACTTTAGATACTCATGCATTTATTTCAGCCCCTGCCCT | + |
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Preference number: 1 (lower is better) Translates to: QAPSETSMGSVLLCA*THFRYSCIYFSPCP Trigger: AGGGCAGGGGCTGAAATAAATGCATGAGTATCTAAAGTGTGTCCATGCACACAATAAGACTGACCCCATGCTGGTCTCGCTGGGTGCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| 3UTR CCA 90 bp | CCCCTGAGTAAATCCATGCAAGAACCCCAAATTGAGAATAAGACATaGTTTCAGAGAGACCCGGGTATGGCATCGGTGGATCAGAGCTTT | + |
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Preference number: 1 (lower is better) Translates to: PLSKSMQEPQIENKT*FQRDPGMASVDQSF Trigger: AAAGCTCTGATCCACCGATGCCATACCCGGGTCTCTCTGAAACCATGTCTTATTCTCAATTTGGGGTTCTTGCATGGATTTACTCAGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| 3UTR TCA 90 bp | AAGACAGCACAGAGGAGCAAAATTAAACAGGCACAATGCATCTTCTaGACACAGAGCTCTGCTATTGGAAGCCAGCATCTGGATATTCGG | + |
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Preference number: 1 (lower is better) Translates to: KTAQRSKIKQAQCIF*TQSSAIGSQHLDIR Trigger: CCGAATATCCAGATGCTGGCTTCCAATAGCAGAGCTCTGTGTTCAGAAGATGCATTGTGCCTGTTTAATTTTGCTCCTCTGTGCTGTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| 3UTR-3UTR GCA 90 bp | ACAAAACTGGACACACTGTGCCCTCCAGAACCAGCACCTAATGGCCACCCCCTCGGTGCAGCAGTGCACTaGAGCCCCCTCACCCAGCCC | + |
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Preference number: 2 (lower is better) Translates to: TKLDTLCPPEPAPNGHPLGAAVH*SPLTQP Trigger: GGGCTGGGTGAGGGGGCTGCAGTGCACTGCTGCACC...GAGGGGGTGGCCATTAGGTGCTGGTTCTGGAGGGCACAGTGTGTCCAGTTTTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| 3UTR CAA 90 bp | CCAGGCCCTCGCCTCAGTGGAAATCCACACAGTACTCGATGGCTGTaGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACT | + |
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Preference number: 2 (lower is better) Translates to: PGPRLSGNPHSTRWL*GQGTVVYGRRQWVT Trigger: AGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTGTGGATTTCCACTGAGGCGAGGGCCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| 3UTR CAA 90 bp | AATTCCCTTGGGAGCCTAAGGCAGAGAGTGGGCGAGACCTCAGTGTaGCGGGCTGAGACGGCCTTCTGGGTGAGGTATCAAGACAGCCCG | + |
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Preference number: 2 (lower is better) Translates to: NSLGSLRQRVGETSV*RAETAFWVRYQDSP Trigger: CGGGCTGTCTTGATACCTCACCCAGAAGGCCGTCTCAGCCCGCAACACTGAGGTCTCGCCCACTCTCTGCCTTAGGCTCCCAAGGGAATT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| 3UTR-3UTR GCA 90 bp | ACAAAACTGGACACACTGTGCCCTCCAGAACCAGCACCTAATGGCCACCCCCTCATCAAGACAGCCCGGTaGAGCAGTGCACTGCAGCCC | + |
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Preference number: 2 (lower is better) Translates to: TKLDTLCPPEPAPNGHPLIKTAR*SSALQP Trigger: GGGCTGCAGTGCACTGCTGCACCGGGCTGTCTTGAT...GAGGGGGTGGCCATTAGGTGCTGGTTCTGGAGGGCACAGTGTGTCCAGTTTTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| 3UTR-3UTR CCA 90 bp | AAGGGGGTGGGGTTGCTGACCACCTTTATCATGGCTGTCATTCGGAATCTTGTTACAGAGGCACGGGGCTaGGGGCTTAGCTGGAGGTGG | + |
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Preference number: 2 (lower is better) Translates to: KGVGLLTTFIMAVIRNLVTEARG*GLSWRW Trigger: CCACCTCCAGCTAAGCCCCCAGCCCCGTGCCTCTGT...AACAAGATTCCGAATGACAGCCATGATAAAGGTGGTCAGCAACCCCACCCCCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| 3UTR-3UTR TCA 90 bp | AATCTGAGGATGCATAGGAGAACCAGAGAACTTGGAAGTGAAGACAGGGCTGGCAGGGGGTGGGGTTGCTaGCCACCTTTATCATGGCTG | + |
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Preference number: 2 (lower is better) Translates to: NLRMHRRTRELGSEDRAGRGWGC*PPLSWL Trigger: CAGCCATGATAAAGGTGGTCAGCAACCCCACCCCCT...GCCAGCCCTGTCTTCACTTCCAAGTTCTCTGGTTCTCCTATGCATCCTCAGATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| 3UTR-3UTR CCA 90 bp | TCCAATCTGAGGATGCATAGGAGAACCAGAGAACTTGGAAGTGAAGACAGGGCTGAGGCAGTGGGTCACTaGCTGTGTGTGGAGTCCTGC | + |
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Preference number: 2 (lower is better) Translates to: SNLRMHRRTRELGSEDRAEAVGH*LCVESC Trigger: GCAGGACTCCACACACAGCCAGTGACCCACTGCCTC...AGCCCTGTCTTCACTTCCAAGTTCTCTGGTTCTCCTATGCATCCTCAGATTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| 3UTR-3UTR TCA 90 bp | ACAAAACTGGACACACTGTGCCCTCCAGAACCAGCACCTAATGGCCACCCCCTCCCCCATCACACCCTATaGTTCAGAAAATCCCAGAAA | + |
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Preference number: 2 (lower is better) Translates to: TKLDTLCPPEPAPNGHPLPHHTL*FRKSQK Trigger: TTTCTGGGATTTTCTGAATCATAGGGTGTGATGGGG...GAGGGGGTGGCCATTAGGTGCTGGTTCTGGAGGGCACAGTGTGTCCAGTTTTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| 3UTR-3UTR TCA 90 bp | TCCAATCTGAGGATGCATAGGAGAACCAGAGAACTTGGAAGTGAAGACAGGGCTTGCCCTGAAACACAGTaGACTTGGGGTGAGGGTCAG | + |
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Preference number: 2 (lower is better) Translates to: SNLRMHRRTRELGSEDRACPETQ*TWGEGQ Trigger: CTGACCCTCACCCCAAGTTCACTGTGTTTCAGGGCA...AGCCCTGTCTTCACTTCCAAGTTCTCTGGTTCTCCTATGCATCCTCAGATTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| 3UTR-3UTR CCA 90 bp | TCCAATCTGAGGATGCATAGGAGAACCAGAGAACTTGGAAGTGAAGACAGGGCTGTACTCGATGGCTGTTaGGTCAAGGCACTGTCGTGT | + |
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Preference number: 2 (lower is better) Translates to: SNLRMHRRTRELGSEDRAVLDGC*VKALSC Trigger: ACACGACAGTGCCTTGACCCAACAGCCATCGAGTAC...AGCCCTGTCTTCACTTCCAAGTTCTCTGGTTCTCCTATGCATCCTCAGATTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| 3UTR-3UTR CCA 90 bp | TTCTGGAAAACCGGAAGAGAGAAGAGACTAGACAAAACTGGACACACTGTGCCCGGGCTTAGCTGGAGGTaGCCAAGCATTTTCCAAATG | + |
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Preference number: 2 (lower is better) Translates to: FWKTGREKRLDKTGHTVPGLSWR*PSIFQM Trigger: CATTTGGAAAATGCTTGGCCACCTCCAGCTAAGCCC...GGGCACAGTGTGTCCAGTTTTGTCTAGTCTCTTCTCTCTTCCGGTTTTCCAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| 3UTR-3UTR GCA 90 bp | CACAAACATCAGCAGGAGCATCATAGGAAGACACAAGGACCCCCATCAGCAGCACACTTTAGATACTCATaGATTTATTTCAGCCCCTGC | + |
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Preference number: 2 (lower is better) Translates to: HKHQQEHHRKTQGPPSAAHFRYS*IYFSPC Trigger: GCAGGGGCTGAAATAAATGCATGAGTATCTAAAGTG...TGCTGCTGATGGGGGTCCTTGTGTCTTCCTATGATGCTCCTGCTGATGTTTGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| 3UTR-3UTR TCA 90 bp | AATCTGAGGATGCATAGGAGAACCAGAGAACTTGGAAGTGAAGACAGGGCTGGCTGTAGGATGAACTGTTaGTGGGGATTAAAGGGATTA | + |
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Preference number: 2 (lower is better) Translates to: NLRMHRRTRELGSEDRAGCRMNC*WGLKGL Trigger: TAATCCCTTTAATCCCCATCAACAGTTCATCCTACA...GCCAGCCCTGTCTTCACTTCCAAGTTCTCTGGTTCTCCTATGCATCCTCAGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| 3UTR-3UTR TCA 90 bp | TCCAATCTGAGGATGCATAGGAGAACCAGAGAACTTGGAAGTGAAGACAGGGCTACAATAGCTCATTCGTaGCCAAGCCATATATCACCT | + |
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Preference number: 2 (lower is better) Translates to: SNLRMHRRTRELGSEDRATIAHS*PSHISP Trigger: AGGTGATATATGGCTTGGTCACGAATGAGCTATTGT...AGCCCTGTCTTCACTTCCAAGTTCTCTGGTTCTCCTATGCATCCTCAGATTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| 3UTR-3UTR TCA 90 bp | CTTTGTTTTAGTGTGAACCACACCCACTGGATAAAACACCAAAGGTTTACTTTTTTTCAGCCCCTGCCCTaGAACACAGTGAACTTGGGG | + |
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Preference number: 2 (lower is better) Translates to: LCFSVNHTHWIKHQRFTFFQPLP*NTVNLG Trigger: CCCCAAGTTCACTGTGTTTCAGGGCAGGGGCTGAAA...AAAAGTAAACCTTTGGTGTTTTATCCAGTGGGTGTGGTTCACACTAAAACAAAG 44% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| 3UTR-3UTR CCA 90 bp | CTTTGTTTTAGTGTGAACCACACCCACTGGATAAAACACCAAAGGTTTACTTTTCCCCATCAGCAGCAATaGCAAACAAGGAGGGAGGAC | + |
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Preference number: 2 (lower is better) Translates to: LCFSVNHTHWIKHQRFTFPHQQQ*QTRRED Trigger: GTCCTCCCTCCTTGTTTGCCATTGCTGCTGATGGGG...AAAAGTAAACCTTTGGTGTTTTATCCAGTGGGTGTGGTTCACACTAAAACAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| 3UTR-3UTR GCA 90 bp | GTCTTATTGTGTGCATGGACACACTTTAGATACTCATGCATTTATTTCAGCCCCCTGAACACAGAGCTCTaGTATTGGAAGCCAGCATCT | + |
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Preference number: 2 (lower is better) Translates to: VLLCAWTHFRYSCIYFSPLNTEL*YWKPAS Trigger: AGATGCTGGCTTCCAATAGCAGAGCTCTGTGTTCAG...GGGGCTGAAATAAATGCATGAGTATCTAAAGTGTGTCCATGCACACAATAAGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| 3UTR-3UTR CCA 90 bp | CTTTGTTTTAGTGTGAACCACACCCACTGGATAAAACACCAAAGGTTTACTTTTCCACACAGTACTCGATaGCTGTTGGGTCAAGGCACT | + |
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Preference number: 2 (lower is better) Translates to: LCFSVNHTHWIKHQRFTFPHSTR*LLGQGT Trigger: AGTGCCTTGACCCAACAGCCATCGAGTACTGTGTGG...AAAAGTAAACCTTTGGTGTTTTATCCAGTGGGTGTGGTTCACACTAAAACAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| 3UTR-3UTR CCA 90 bp | AGAAGCCGTCAGAGATCGCATCCTTCCTGTCCTCATTTTCTTAGACCATCAAAAATTGAGAATAAGACATaGTTTCAGAGAGACCCGGGT | + |
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Preference number: 2 (lower is better) Translates to: RSRQRSHPSCPHFLRPSKIENKT*FQRDPG Trigger: ACCCGGGTCTCTCTGAAACCATGTCTTATTCTCAAT...TTTTGATGGTCTAAGAAAATGAGGACAGGAAGGATGCGATCTCTGACGGCTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| 3UTR-3UTR CCA 90 bp | CTTTGTTTTAGTGTGAACCACACCCACTGGATAAAACACCAAAGGTTTACTTTTGTCTTATTGTGTGCATaGACACACTTTAGATACTCA | + |
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Preference number: 2 (lower is better) Translates to: LCFSVNHTHWIKHQRFTFVLLCA*THFRYS Trigger: TGAGTATCTAAAGTGTGTCCATGCACACAATAAGAC...AAAAGTAAACCTTTGGTGTTTTATCCAGTGGGTGTGGTTCACACTAAAACAAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| 3UTR TCA 72 bp | AAGGCAGAGAGTGGGCGAGACCTCAGTGTTGCGGGCTaGGACGGCCTTCTGGGTGAGGTATCAAGACAGCCC | + |
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Preference number: 3 (lower is better) Translates to: KAESGRDLSVAG*DGLLGEVSRQP Trigger: GGGCTGTCTTGATACCTCACCCAGAAGGCCGTCTCAGCCCGCAACACTGAGGTCTCGCCCACTCTCTGCCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| 3UTR CCA 72 bp | GGCCCTCGCCTCAGTGGAAATCCACACAGTACTCGATaGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGG | + |
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Preference number: 3 (lower is better) Translates to: GPRLSGNPHSTR*LLGQGTVVYGR Trigger: CCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTGTGGATTTCCACTGAGGCGAGGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| 3UTR CCA 72 bp | GCCTCAGTGGAAATCCACACAGTACTCGATGGCTGTTaGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGT | + |
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Preference number: 3 (lower is better) Translates to: ASVEIHTVLDGC*VKALSCTAGGS Trigger: ACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTGTGGATTTCCACTGAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| 3UTR CCA 72 bp | GAAGCCAGCATCTGGATATTCGGTCTCAAATTCCCTTaGGAGCCTAAGGCAGAGAGTGGGCGAGACCTCAGT | + |
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Preference number: 3 (lower is better) Translates to: EASIWIFGLKFP*EPKAESGRDLS Trigger: ACTGAGGTCTCGCCCACTCTCTGCCTTAGGCTCCCAAGGGAATTTGAGACCGAATATCCAGATGCTGGCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| 3UTR TCA 72 bp | ACAGGGAGGACACAGGGAGGGCGGTTCAATCCAATCTaGGGATGCATAGGAGAACCAGAGAACTTGGAAGTG | + |
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Preference number: 3 (lower is better) Translates to: TGRTQGGRFNPI*GCIGEPENLEV Trigger: CACTTCCAAGTTCTCTGGTTCTCCTATGCATCCTCAGATTGGATTGAACCGCCCTCCCTGTGTCCTCCCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| 3UTR CCA 72 bp | AGACATGGTTTCAGAGAGACCCGGGTATGGCATCGGTaGATCAGAGCTTTTCCTTTAGTGGCGGCCAAGCAA | + |
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Preference number: 3 (lower is better) Translates to: RHGFRETRVWHR*IRAFPLVAAKQ Trigger: TTGCTTGGCCGCCACTAAAGGAAAAGCTCTGATCCACCGATGCCATACCCGGGTCTCTCTGAAACCATGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| 3UTR-3UTR CAA 90 bp | AAGGGGGTGGGGTTGCTGACCACCTTTATCATGGCTGTCATTCGGAATCTTGTTAGTACTCGATGGCTGTaGGGTCAAGGCACTGTCGTG | + |
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Preference number: 3 (lower is better) Translates to: KGVGLLTTFIMAVIRNLVSTRWL*GQGTVV Trigger: CACGACAGTGCCTTGACCCAACAGCCATCGAGTACT...AACAAGATTCCGAATGACAGCCATGATAAAGGTGGTCAGCAACCCCACCCCCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| 3UTR-3UTR CAA 90 bp | CACAAACATCAGCAGGAGCATCATAGGAAGACACAAGGACCCCCATCAGCAGCAGGAGAACCAGAGAACTaGGAAGTGAAGACAGGGCTG | + |
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Preference number: 3 (lower is better) Translates to: HKHQQEHHRKTQGPPSAAGEPEN*EVKTGL Trigger: CAGCCCTGTCTTCACTTCCAAGTTCTCTGGTTCTCC...TGCTGCTGATGGGGGTCCTTGTGTCTTCCTATGATGCTCCTGCTGATGTTTGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| 3UTR TCA 72 bp | CTCTTGACAGTGATTCTTGGCCGAGTGTGTGAGACATaGAGGCATCGAGAAGCCGTCAGAGATCGCATCCTT | + |
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Preference number: 3 (lower is better) Translates to: LLTVILGRVCET*RHREAVRDRIL Trigger: AAGGATGCGATCTCTGACGGCTTCTCGATGCCTTCATGTCTCACACACTCGGCCAAGAATCACTGTCAAGAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| 3UTR TCA 72 bp | GTCGTTTCTCTTGACAGTGATTCTTGGCCGAGTGTGTaGGACATGAAGGCATCGAGAAGCCGTCAGAGATCG | + |
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Preference number: 3 (lower is better) Translates to: VVSLDSDSWPSV*DMKASRSRQRS Trigger: CGATCTCTGACGGCTTCTCGATGCCTTCATGTCTCACACACTCGGCCAAGAATCACTGTCAAGAGAAACGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| 3UTR-3UTR CAA 90 bp | ACAAAACTGGACACACTGTGCCCTCCAGAACCAGCACCTAATGGCCACCCCCTCTGCAAGAACCCCAAATaGAGAATAAGACATGGTTTC | + |
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Preference number: 3 (lower is better) Translates to: TKLDTLCPPEPAPNGHPLCKNPK*RIRHGF Trigger: GAAACCATGTCTTATTCTCAATTTGGGGTTCTTGCA...GAGGGGGTGGCCATTAGGTGCTGGTTCTGGAGGGCACAGTGTGTCCAGTTTTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| 3UTR CCA 72 bp | CTGGAAAACCGGAAGAGAGAAGAGACTAGACAAAACTaGACACACTGTGCCCTCCAGAACCAGCACCTAATG | + |
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Preference number: 3 (lower is better) Translates to: LENRKREETRQN*THCALQNQHLM Trigger: CATTAGGTGCTGGTTCTGGAGGGCACAGTGTGTCCAGTTTTGTCTAGTCTCTTCTCTCTTCCGGTTTTCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| 3UTR CCA 72 bp | GGCACAATGCATCTTCTGAACACAGAGCTCTGCTATTaGAAGCCAGCATCTGGATATTCGGTCTCAAATTCC | + |
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Preference number: 3 (lower is better) Translates to: GTMHLLNTELCY*KPASGYSVSNS Trigger: GGAATTTGAGACCGAATATCCAGATGCTGGCTTCCAATAGCAGAGCTCTGTGTTCAGAAGATGCATTGTGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| 3UTR-3UTR CAA 90 bp | TTCTGGAAAACCGGAAGAGAGAAGAGACTAGACAAAACTGGACACACTGTGCCCTCATTCGGAATCTTGTaGAATTTGGCAGGAGATATC | + |
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Preference number: 3 (lower is better) Translates to: FWKTGREKRLDKTGHTVPSFGIL*NLAGDI Trigger: GATATCTCCTGCCAAATTCAACAAGATTCCGAATGA...GGGCACAGTGTGTCCAGTTTTGTCTAGTCTCTTCTCTCTTCCGGTTTTCCAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| 3UTR CCA 72 bp | AGCGAGACCAGCATGGGGTCAGTCTTATTGTGTGCATaGACACACTTTAGATACTCATGCATTTATTTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: SETSMGSVLLCA*THFRYSCIYFS Trigger: GCTGAAATAAATGCATGAGTATCTAAAGTGTGTCCATGCACACAATAAGACTGACCCCATGCTGGTCTCGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
||
| CDS-3UTR TCA 90 bp | CGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGAGGCTGGGGTTGCTTaGGCCTGCTCTGGGACGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RWLLGQGTVVYGRRQWVTEAGVA*ACSGTV Trigger: CACCGTCCCAGAGCAGGCTCAAGCAACCCCAGCCTC...AGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
||
| CDS-3UTR GCA 90 bp | GTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCTGTGTCCAGCCCATACACGGTaGCCGCTGCCAGGTACACGT | + |
|
Preference number: 4 (lower is better) Translates to: VGSRHCRVRPEAVGHWLCPAHTR*PLPGTR Trigger: ACGTGTACCTGGCAGCGGGCACCGTGTATGGGCTGG...ACACAGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
||
| CDS-3UTR GCA 90 bp | TCCACACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGCCCGGCGCTCTGCAGTaGGGAGGGTCTCCTCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: STQYSMAVGSRHCRVRPEPGALQ*GGSPLD Trigger: ATCCAGAGGAGACCCTCCGCACTGCAGAGCGCCGGG...CTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTGTGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
||
| CDS-3UTR CCA 90 bp | TCCACACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGGACCGTGGCCACTCTaGCTCCTCCTCCTCAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: STQYSMAVGSRHCRVRPEGPWPL*LLLLSS Trigger: CGAGCTGAGGAGGAGGAGCCAGAGTGGCCACGGTCC...CTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTGTGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
||
| CDS-3UTR CCA 90 bp | TCCACACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGCCATGCTCCTCCAGCTaGGCAGAGCGGCCTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: STQYSMAVGSRHCRVRPEPCSSS*AERPPP Trigger: TGGAGGAGGCCGCTCTGCCCAGCTGGAGGAGCATGG...CTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTGTGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
||
| CDS-3UTR GCA 90 bp | CGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTTCCTCGGCCAGCCTCTaGTTCATCTCACTTAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: RWLLGQGTVVYGRRQWVTSSASL*FISLSR Trigger: CCGGCTAAGTGAGATGAAGCAGAGGCTGGCCGAGGA...AGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
||
| CDS-3UTR CCA 90 bp | GTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCTGTGTGGTCCCGCAGGTAGCTaGCCTCGTTCTGTTTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VGSRHCRVRPEAVGHWLCGPAGS*PRSVCP Trigger: TGGACAAACAGAACGAGGCCAGCTACCTGCGGGACC...ACACAGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
||
| CDS-3UTR CCA 90 bp | GATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGTGGCTAAGGGACCTTaGCCAGAACTCTGGGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: DGCWVKALSCTAGGSGSLVAKGP*PELWAC Trigger: ACAGGCCCAGAGTTCTGGCCAAGGTCCCTTAGCCAC...CAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
||
| CDS-3UTR CCA 90 bp | TCCACACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGTCTGTCAGTGGAGACTaGGGGGATCTCCCAGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: STQYSMAVGSRHCRVRPESVSGD*GDLPGP Trigger: GGGCCCTGGGAGATCCCCCCAGTCTCCACTGACAGA...CTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTGTGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
||
| 3UTR CAA 72 bp | GGGAGCCTAAGGCAGAGAGTGGGCGAGACCTCAGTGTaGCGGGCTGAGACGGCCTTCTGGGTGAGGTATCAA | + |
|
Preference number: 4 (lower is better) Translates to: GSLRQRVGETSV*RAETAFWVRYQ Trigger: TTGATACCTCACCCAGAAGGCCGTCTCAGCCCGCAACACTGAGGTCTCGCCCACTCTCTGCCTTAGGCTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
||
| CDS-3UTR GCA 90 bp | GATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCTTCGAGAGGATGCTaGACTTGCTGTTCTCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: DGCWVKALSCTAGGSGSLASRGC*TCCSPR Trigger: CCGAGGAGAACAGCAAGTGCAGCATCCTCTCGAAGC...CAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
||
| CDS-3UTR CCA 90 bp | CGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTTTGGACTCGGACTCCTaGTCCTCCCCAGAAGAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: RWLLGQGTVVYGRRQWVTLDSDS*SSPEEV Trigger: GACTTCTTCTGGGGAGGACCAGGAGTCCGAGTCCAA...AGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
||
| CDS-3UTR GCA 90 bp | ACAAAACTGGACACACTGTGCCCTCCAGAACCAGCACCTAATGGCCACCCCCTCCGTCCAGTCCATCCATaGTCCTCCAGCTGGGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TKLDTLCPPEPAPNGHPLRPVHP*SSSWAE Trigger: CTCTGCCCAGCTGGAGGAGCATGGATGGACTGGACG...GAGGGGGTGGCCATTAGGTGCTGGTTCTGGAGGGCACAGTGTGTCCAGTTTTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
||
| CDS-3UTR GCA 90 bp | TCCACACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGATCTCCCAGGGCCCTaGAGACTCTGCGATCAACTC | + |
|
Preference number: 4 (lower is better) Translates to: STQYSMAVGSRHCRVRPEDLPGP*RLCDQL Trigger: GAGTTGATCGCAGAGTCTGCAGGGCCCTGGGAGATC...CTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTGTGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
||
| CDS-3UTR GCA 90 bp | GATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGTCCAAGGACGTCAGCTaGTTGTCCAGTCTCACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: DGCWVKALSCTAGGSGSLSKDVS*LSSLTW Trigger: CCAAGTGAGACTGGACAAGCAGCTGACGTCCTTGGA...CAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
||
| CDS-3UTR GCA 90 bp | GATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGGCAGTTTCCTCCTCTaGTGCCTCGACGTGTCTATA | + |
|
Preference number: 4 (lower is better) Translates to: DGCWVKALSCTAGGSGSLGSFLL*CLDVSI Trigger: TATAGACACGTCGAGGCAGCAGAGGAGGAAACTGCC...CAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
||
| CDS-3UTR CCA 90 bp | CACAAACATCAGCAGGAGCATCATAGGAAGACACAAGGACCCCCATCAGCAGCATCGGCGTGGTGCACCTaGGCTGCAGCTGCAGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: HKHQQEHHRKTQGPPSAASAWCT*AAAAAT Trigger: GGTGGCTGCAGCTGCAGCCCAGGTGCACCACGCCGA...TGCTGCTGATGGGGGTCCTTGTGTCTTCCTATGATGCTCCTGCTGATGTTTGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
||
| CDS-3UTR TCA 90 bp | ACAAAACTGGACACACTGTGCCCTCCAGAACCAGCACCTAATGGCCACCCCCTCAGCGATGGTCAGGGCTaGAATGCGGCTCTCGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: TKLDTLCPPEPAPNGHPLSDGQG*NAALDV Trigger: GACATCGAGAGCCGCATTTCAGCCCTGACCATCGCT...GAGGGGGTGGCCATTAGGTGCTGGTTCTGGAGGGCACAGTGTGTCCAGTTTTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
||
| CDS-3UTR GCA 90 bp | CACAAACATCAGCAGGAGCATCATAGGAAGACACAAGGACCCCCATCAGCAGCACACCTGGGCTGCAGCTaGAGCCACCTGGTCCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: HKHQQEHHRKTQGPPSAAHLGCS*SHLVLQ Trigger: CTGGAGGACCAGGTGGCTGCAGCTGCAGCCCAGGTG...TGCTGCTGATGGGGGTCCTTGTGTCTTCCTATGATGCTCCTGCTGATGTTTGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
||
| CDS-3UTR GCA 90 bp | CACAAACATCAGCAGGAGCATCATAGGAAGACACAAGGACCCCCATCAGCAGCAGTGGTGCACCTGGGCTaGAGCTGCAGCCACCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: HKHQQEHHRKTQGPPSAAVVHLG*SCSHLV Trigger: GACCAGGTGGCTGCAGCTGCAGCCCAGGTGCACCAC...TGCTGCTGATGGGGGTCCTTGTGTCTTCCTATGATGCTCCTGCTGATGTTTGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
||
| CDS-3UTR GCA 90 bp | AAGGGGGTGGGGTTGCTGACCACCTTTATCATGGCTGTCATTCGGAATCTTGTTCCGTCTCGCCAGTGCTaGTGTGGATGCAGCGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KGVGLLTTFIMAVIRNLVPSRQC*CGCSGQ Trigger: CTGCCCGCTGCATCCACAGCAGCACTGGCGAGACGG...AACAAGATTCCGAATGACAGCCATGATAAAGGTGGTCAGCAACCCCACCCCCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
||
| CDS-3UTR CCA 90 bp | AATCTGAGGATGCATAGGAGAACCAGAGAACTTGGAAGTGAAGACAGGGCTGGCCCACTGCGGGGTTCTTaGGGGCCTTCCTCTGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: NLRMHRRTRELGSEDRAGPLRGS*GPSSAA Trigger: GGCTGCAGAGGAAGGCCCCCAAGAACCCCGCAGTGG...GCCAGCCCTGTCTTCACTTCCAAGTTCTCTGGTTCTCCTATGCATCCTCAGATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
||
| CDS-3UTR TCA 90 bp | TCCACACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGCACTGCCAAAGCGCTTaGAGCGGCTTTTCACATTGT | + |
|
Preference number: 4 (lower is better) Translates to: STQYSMAVGSRHCRVRPEHCQSA*SGFSHC Trigger: ACAATGTGAAAAGCCGCTTCAAGCGCTTTGGCAGTG...CTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTGTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
||
| CDS-3UTR GCA 90 bp | GTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCTGTGTAGATTGAAGTCTCTCTaGACCACTTGGAGAACATGC | + |
|
Preference number: 4 (lower is better) Translates to: VGSRHCRVRPEAVGHWLCRLKSL*TTWRTC Trigger: GCATGTTCTCCAAGTGGTGCAGAGAGACTTCAATCT...ACACAGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
||
| CDS-3UTR GCA 90 bp | ACAAAACTGGACACACTGTGCCCTCCAGAACCAGCACCTAATGGCCACCCCCTCTGTACCTGGCTCCTTTaGTTCTGGTCCCGTCTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: TKLDTLCPPEPAPNGHPLCTWLL*FWSRLR Trigger: ACGAAGACGGGACCAGAAGCAAAGGAGCCAGGTACA...GAGGGGGTGGCCATTAGGTGCTGGTTCTGGAGGGCACAGTGTGTCCAGTTTTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
||
| CDS-3UTR CCA 90 bp | TCCACACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGTCCAGGCTGTCCCCATaGGATTCTGCTTTGGAAATG | + |
|
Preference number: 4 (lower is better) Translates to: STQYSMAVGSRHCRVRPESRLSP*DSALEM Trigger: CATTTCCAAAGCAGAATCCCATGGGGACAGCCTGGA...CTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTGTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
||
| CDS-3UTR CCA 90 bp | AAGGGGGTGGGGTTGCTGACCACCTTTATCATGGCTGTCATTCGGAATCTTGTTTGCTTTGTGTCGTCCTaGAGGGGCCGTGGTCCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KGVGLLTTFIMAVIRNLVCFVSS*RGRGPL Trigger: GAGGGGACCACGGCCCCTCCAGGACGACACAAAGCA...AACAAGATTCCGAATGACAGCCATGATAAAGGTGGTCAGCAACCCCACCCCCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
||
| CDS-3UTR CCA 90 bp | CACAAACATCAGCAGGAGCATCATAGGAAGACACAAGGACCCCCATCAGCAGCATGCAGTGCCCGTGGATaGGCACCAGGTGAAGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: HKHQQEHHRKTQGPPSAACSARG*APGEGR Trigger: TCTGCCTTCACCTGGTGCCCATCCACGGGCACTGCA...TGCTGCTGATGGGGGTCCTTGTGTCTTCCTATGATGCTCCTGCTGATGTTTGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
||
| CDS-3UTR TCA 90 bp | TCCAATCTGAGGATGCATAGGAGAACCAGAGAACTTGGAAGTGAAGACAGGGCTGCCACCTCCAGGGCCTaGAAGGTCCCACTCTTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: SNLRMHRRTRELGSEDRAATSRA*KVPLFG Trigger: ACCGAAGAGTGGGACCTTTCAGGCCCTGGAGGTGGC...AGCCCTGTCTTCACTTCCAAGTTCTCTGGTTCTCCTATGCATCCTCAGATTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
||
| CDS-3UTR GCA 90 bp | ACAAAACTGGACACACTGTGCCCTCCAGAACCAGCACCTAATGGCCACCCCCTCCATAGTGAAGGAGAATaGAGACTGGGACCGCCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: TKLDTLCPPEPAPNGHPLHSEGE*RLGPPE Trigger: TTCAGGCGGTCCCAGTCTGCATTCTCCTTCACTATG...GAGGGGGTGGCCATTAGGTGCTGGTTCTGGAGGGCACAGTGTGTCCAGTTTTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
||
| CDS-3UTR GCA 90 bp | AATCTGAGGATGCATAGGAGAACCAGAGAACTTGGAAGTGAAGACAGGGCTGGCCAGTGCTGCTGTGGATaGAGCGGGCAGCGTCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: NLRMHRRTRELGSEDRAGQCCCG*SGQRLP Trigger: TGGAAGACGCTGCCCGCTGCATCCACAGCAGCACTG...GCCAGCCCTGTCTTCACTTCCAAGTTCTCTGGTTCTCCTATGCATCCTCAGATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
||
| CDS-3UTR GCA 90 bp | TTCTGGAAAACCGGAAGAGAGAAGAGACTAGACAAAACTGGACACACTGTGCCCTGGAGTTCGGCGTGGTaGACCTGGGCTGCAGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: FWKTGREKRLDKTGHTVPWSSAW*TWAAAA Trigger: TGCAGCTGCAGCCCAGGTGCACCACGCCGAACTCCA...GGGCACAGTGTGTCCAGTTTTGTCTAGTCTCTTCTCTCTTCCGGTTTTCCAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
||
| CDS-3UTR CCA 90 bp | AATCTGAGGATGCATAGGAGAACCAGAGAACTTGGAAGTGAAGACAGGGCTGGCTGGTCCCCTCACCCCTaGCCTTCACACTGCCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: NLRMHRRTRELGSEDRAGWSPHP*PSHCHS Trigger: AGAGTGGCAGTGTGAAGGCCAGGGGTGAGGGGACCA...GCCAGCCCTGTCTTCACTTCCAAGTTCTCTGGTTCTCCTATGCATCCTCAGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
||
| CDS-3UTR CCA 90 bp | TCCAATCTGAGGATGCATAGGAGAACCAGAGAACTTGGAAGTGAAGACAGGGCTAGGCAGACGTCACACTaGACGCCACCTCCAGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SNLRMHRRTRELGSEDRARQTSH*TPPPGP Trigger: AGGCCCTGGAGGTGGCGTCCAGTGTGACGTCTGCCT...AGCCCTGTCTTCACTTCCAAGTTCTCTGGTTCTCCTATGCATCCTCAGATTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
||
| CDS-3UTR CCA 90 bp | AGAAGCCGTCAGAGATCGCATCCTTCCTGTCCTCATTTTCTTAGACCATCAAAACCCTTCTCCACCTCCTaGCCCGGCGCTCTGCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RSRQRSHPSCPHFLRPSKPFSTS*PGALQC Trigger: GCACTGCAGAGCGCCGGGCCAGGAGGTGGAGAAGGG...TTTTGATGGTCTAAGAAAATGAGGACAGGAAGGATGCGATCTCTGACGGCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
||
| CDS-3UTR TCA 90 bp | TCCACACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGCCTTTTTGCGAAGATTaGAGTCTCTCTGCACCACTT | + |
|
Preference number: 4 (lower is better) Translates to: STQYSMAVGSRHCRVRPEPFCED*SLSAPL Trigger: AAGTGGTGCAGAGAGACTTCAATCTTCGCAAAAAGG...CTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTGTGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
||
| CDS-3UTR GCA 90 bp | AATCTGAGGATGCATAGGAGAACCAGAGAACTTGGAAGTGAAGACAGGGCTGGCAGAGGATGCTGCACTTaGTGTTCTCCTCGGCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: NLRMHRRTRELGSEDRAGRGCCT*CSPRPA Trigger: GGCTGGCCGAGGAGAACAGCAAGTGCAGCATCCTCT...GCCAGCCCTGTCTTCACTTCCAAGTTCTCTGGTTCTCCTATGCATCCTCAGATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
||
| CDS-3UTR GCA 90 bp | TTCTGGAAAACCGGAAGAGAGAAGAGACTAGACAAAACTGGACACACTGTGCCCTTGGGGGCCTTCCTCTaGAGCCAGGACAGCTTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: FWKTGREKRLDKTGHTVPLGAFL*SQDSLA Trigger: GGCTAAGCTGTCCTGGCTGCAGAGGAAGGCCCCCAA...GGGCACAGTGTGTCCAGTTTTGTCTAGTCTCTTCTCTCTTCCGGTTTTCCAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
||
| CDS-3UTR GCA 90 bp | TCCAATCTGAGGATGCATAGGAGAACCAGAGAACTTGGAAGTGAAGACAGGGCTGGGCATCTTCTCCACTaGGGGGTTCTTGGGGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SNLRMHRRTRELGSEDRAGHLLH*GVLGGL Trigger: AAGGCCCCCAAGAACCCCGCAGTGGAGAAGATGCCC...AGCCCTGTCTTCACTTCCAAGTTCTCTGGTTCTCCTATGCATCCTCAGATTGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
||
| CDS-3UTR CCA 90 bp | CACAAACATCAGCAGGAGCATCATAGGAAGACACAAGGACCCCCATCAGCAGCACTGAATCCGAGCACATaGCCTCAGGGTTTGAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: HKHQQEHHRKTQGPPSAALNPST*PQGLRE Trigger: CTCCCTCAAACCCTGAGGCCATGTGCTCGGATTCAG...TGCTGCTGATGGGGGTCCTTGTGTCTTCCTATGATGCTCCTGCTGATGTTTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
||
| CDS-3UTR CCA 90 bp | TTCTGGAAAACCGGAAGAGAGAAGAGACTAGACAAAACTGGACACACTGTGCCCATCTGGAGTTCGGCGTaGTGCACCTGGGCTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: FWKTGREKRLDKTGHTVPIWSSA*CTWAAA Trigger: AGCTGCAGCCCAGGTGCACCACGCCGAACTCCAGAT...GGGCACAGTGTGTCCAGTTTTGTCTAGTCTCTTCTCTCTTCCGGTTTTCCAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
||
| CDS-3UTR CCA 90 bp | TGGAGGTGGCCAAGCATTTTCCAAATGAGACTGTTTCTAGTGCCCCCTGCTCTTCACCGGTACTTGCTGTaGGCCTGTTTGTGGAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: WRWPSIFQMRLFLVPPALHRYLL*ACLWRS Trigger: GCTCCTCCACAAACAGGCCCACAGCAAGTACCGGTG...AAGAGCAGGGGGCACTAGAAACAGTCTCATTTGGAAAATGCTTGGCCACCTCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
||
| CDS-3UTR GCA 90 bp | AAGGGGGTGGGGTTGCTGACCACCTTTATCATGGCTGTCATTCGGAATCTTGTTCTCAGAAGCCTGGCTTaGTGGCAGACACAGCAAACC | + |
|
Preference number: 4 (lower is better) Translates to: KGVGLLTTFIMAVIRNLVLRSLA*WQTQQT Trigger: GGTTTGCTGTGTCTGCCAGCAAGCCAGGCTTCTGAG...AACAAGATTCCGAATGACAGCCATGATAAAGGTGGTCAGCAACCCCACCCCCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
||
| CDS-3UTR GCA 90 bp | AAGGGGGTGGGGTTGCTGACCACCTTTATCATGGCTGTCATTCGGAATCTTGTTTGGTCAGGGCTGAAATaGGGCTCTCGATGTCCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KGVGLLTTFIMAVIRNLVWSGLK*GSRCPR Trigger: TCTCGGACATCGAGAGCCGCATTTCAGCCCTGACCA...AACAAGATTCCGAATGACAGCCATGATAAAGGTGGTCAGCAACCCCACCCCCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
||
| CDS-3UTR CCA 90 bp | AATCTGAGGATGCATAGGAGAACCAGAGAACTTGGAAGTGAAGACAGGGCTGGCCGCTCCACGAACTTCTaGTGCTTCGAGAGGATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NLRMHRRTRELGSEDRAGRSTNF*CFERML Trigger: CAGCATCCTCTCGAAGCACCAGAAGTTCGTGGAGCG...GCCAGCCCTGTCTTCACTTCCAAGTTCTCTGGTTCTCCTATGCATCCTCAGATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
||
| CDS-3UTR CCA 90 bp | AAGGGGGTGGGGTTGCTGACCACCTTTATCATGGCTGTCATTCGGAATCTTGTTACGTCCAGTTCTCCCTaGAGGGGCATCTTCTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: KGVGLLTTFIMAVIRNLVTSSSP*RGIFST Trigger: AGTGGAGAAGATGCCCCTCCAGGGAGAACTGGACGT...AACAAGATTCCGAATGACAGCCATGATAAAGGTGGTCAGCAACCCCACCCCCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| CDS-3UTR CCA 90 bp | CACAAACATCAGCAGGAGCATCATAGGAAGACACAAGGACCCCCATCAGCAGCACATGGGATTCTGCTTTaGAAATGGCCTCCTCGATGG | + |
|
Preference number: 4 (lower is better) Translates to: HKHQQEHHRKTQGPPSAAHGILL*KWPPRW Trigger: CCATCGAGGAGGCCATTTCCAAAGCAGAATCCCATG...TGCTGCTGATGGGGGTCCTTGTGTCTTCCTATGATGCTCCTGCTGATGTTTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| CDS-3UTR CCA 90 bp | TGGAGGTGGCCAAGCATTTTCCAAATGAGACTGTTTCTAGTGCCCCCTGCTCTTTGGCTCCTTTGCTTCTaGTCCCGTCTTCGTGTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: WRWPSIFQMRLFLVPPALWLLCF*SRLRVR Trigger: TCTCACACGAAGACGGGACCAGAAGCAAAGGAGCCA...AAGAGCAGGGGGCACTAGAAACAGTCTCATTTGGAAAATGCTTGGCCACCTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| CDS-3UTR TCA 90 bp | CACAAACATCAGCAGGAGCATCATAGGAAGACACAAGGACCCCCATCAGCAGCATTAGTACATCACAGCTaGCTCCAGATCAGGCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: HKHQQEHHRKTQGPPSAALVHHS*LQIRLH Trigger: ATGGAGCCTGATCTGGAGTCAGCTGTGATGTACTAA...TGCTGCTGATGGGGGTCCTTGTGTCTTCCTATGATGCTCCTGCTGATGTTTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| CDS-3UTR GCA 90 bp | TTCTGGAAAACCGGAAGAGAGAAGAGACTAGACAAAACTGGACACACTGTGCCCGGTGCTTCGAGAGGATaGTGCACTTGCTGTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FWKTGREKRLDKTGHTVPGASRG*CTCCSP Trigger: AGGAGAACAGCAAGTGCAGCATCCTCTCGAAGCACC...GGGCACAGTGTGTCCAGTTTTGTCTAGTCTCTTCTCTCTTCCGGTTTTCCAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| CDS-3UTR CCA 90 bp | TTCTGGAAAACCGGAAGAGAGAAGAGACTAGACAAAACTGGACACACTGTGCCCTTCTTCAGCTCCTCCTaGACACCCTGGTTGTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FWKTGREKRLDKTGHTVPFFSSS*TPWLFS Trigger: GGAGAACAACCAGGGTGTCCAGGAGGAGCTGAAGAA...GGGCACAGTGTGTCCAGTTTTGTCTAGTCTCTTCTCTCTTCCGGTTTTCCAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| CDS-3UTR CCA 90 bp | GTCTTATTGTGTGCATGGACACACTTTAGATACTCATGCATTTATTTCAGCCCCTCGCCAGTGCTGCTGTaGATGCAGCGGGCAGCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VLLCAWTHFRYSCIYFSPSPVLL*MQRAAS Trigger: AGACGCTGCCCGCTGCATCCACAGCAGCACTGGCGA...GGGGCTGAAATAAATGCATGAGTATCTAAAGTGTGTCCATGCACACAATAAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| CDS-3UTR CCA 90 bp | TTCTGGAAAACCGGAAGAGAGAAGAGACTAGACAAAACTGGACACACTGTGCCCTGTTTAAGCCAGCGATaGTCAGGGCTGAAATGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: FWKTGREKRLDKTGHTVPCLSQR*SGLKCG Trigger: GCCGCATTTCAGCCCTGACCATCGCTGGCTTAAACA...GGGCACAGTGTGTCCAGTTTTGTCTAGTCTCTTCTCTCTTCCGGTTTTCCAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| 3UTR CAA 72 bp | CAGGCACCCAGCGAGACCAGCATGGGGTCAGTCTTATaGTGTGCATGGACACACTTTAGATACTCATGCATT | + |
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Preference number: 4 (lower is better) Translates to: QAPSETSMGSVL*CAWTHFRYSCI Trigger: AATGCATGAGTATCTAAAGTGTGTCCATGCACACAATAAGACTGACCCCATGCTGGTCTCGCTGGGTGCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| CDS-3UTR CCA 90 bp | AATCTGAGGATGCATAGGAGAACCAGAGAACTTGGAAGTGAAGACAGGGCTGGCATTCTGCTTTGGAAATaGCCTCCTCGATGGCCTCTT | + |
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Preference number: 4 (lower is better) Translates to: NLRMHRRTRELGSEDRAGILLWK*PPRWPL Trigger: AAGAGGCCATCGAGGAGGCCATTTCCAAAGCAGAAT...GCCAGCCCTGTCTTCACTTCCAAGTTCTCTGGTTCTCCTATGCATCCTCAGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| CDS-3UTR CCA 90 bp | GTCTTATTGTGTGCATGGACACACTTTAGATACTCATGCATTTATTTCAGCCCCTCCAGCTCACTCAGCTaGCCCTCCAGCCCATACACG | + |
|
Preference number: 4 (lower is better) Translates to: VLLCAWTHFRYSCIYFSPSSSLS*PSSPYT Trigger: CGTGTATGGGCTGGAGGGCCAGCTGAGTGAGCTGGA...GGGGCTGAAATAAATGCATGAGTATCTAAAGTGTGTCCATGCACACAATAAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| CDS-3UTR GCA 90 bp | AGAAGCCGTCAGAGATCGCATCCTTCCTGTCCTCATTTTCTTAGACCATCAAAATCCACGAACTTCTGGTaGTTCGAGAGGATGCTGCAC | + |
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Preference number: 4 (lower is better) Translates to: RSRQRSHPSCPHFLRPSKSTNFW*FERMLH Trigger: GTGCAGCATCCTCTCGAAGCACCAGAAGTTCGTGGA...TTTTGATGGTCTAAGAAAATGAGGACAGGAAGGATGCGATCTCTGACGGCTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| CDS-3UTR GCA 90 bp | AGAAGCCGTCAGAGATCGCATCCTTCCTGTCCTCATTTTCTTAGACCATCAAAAGTCCCCATGGGATTCTaGTTTGGAAATGGCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RSRQRSHPSCPHFLRPSKVPMGF*FGNGLL Trigger: GAGGAGGCCATTTCCAAAGCAGAATCCCATGGGGAC...TTTTGATGGTCTAAGAAAATGAGGACAGGAAGGATGCGATCTCTGACGGCTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| CDS-3UTR CCA 90 bp | CTTTGTTTTAGTGTGAACCACACCCACTGGATAAAACACCAAAGGTTTACTTTTGGGGCTCTGCAAAAGTaGGGCCAGGTTTGTTCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: LCFSVNHTHWIKHQRFTFGALQK*GQVCSV Trigger: GACGGAACAAACCTGGCCCCACTTTTGCAGAGCCCC...AAAAGTAAACCTTTGGTGTTTTATCCAGTGGGTGTGGTTCACACTAAAACAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| CDS-3UTR CCA 90 bp | AGAAGCCGTCAGAGATCGCATCCTTCCTGTCCTCATTTTCTTAGACCATCAAAATTGTCCAGTCTCACTTaGTCTGTCCCAAGAGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: RSRQRSHPSCPHFLRPSKLSSLT*SVPRGN Trigger: GTTTCCTCTTGGGACAGACCAAGTGAGACTGGACAA...TTTTGATGGTCTAAGAAAATGAGGACAGGAAGGATGCGATCTCTGACGGCTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| CDS-3UTR TCA 90 bp | CTTTGTTTTAGTGTGAACCACACCCACTGGATAAAACACCAAAGGTTTACTTTTCATGCTGTGCCCTTCTaGCTGCCTGTAGAACGTGGA | + |
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Preference number: 4 (lower is better) Translates to: LCFSVNHTHWIKHQRFTFHAVPF*LPVERG Trigger: TCCACGTTCTACAGGCAGTCAGAAGGGCACAGCATG...AAAAGTAAACCTTTGGTGTTTTATCCAGTGGGTGTGGTTCACACTAAAACAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| CDS-3UTR GCA 90 bp | TCCAATCTGAGGATGCATAGGAGAACCAGAGAACTTGGAAGTGAAGACAGGGCTTCAGCTTTATCCTTCTaGTTTCTTATAATCCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SNLRMHRRTRELGSEDRASALSF*FLIILC Trigger: GCAGAGGATTATAAGAAAGCAGAAGGATAAAGCTGA...AGCCCTGTCTTCACTTCCAAGTTCTCTGGTTCTCCTATGCATCCTCAGATTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| CDS-3UTR CCA 90 bp | CTTTGTTTTAGTGTGAACCACACCCACTGGATAAAACACCAAAGGTTTACTTTTTTTGTGGAGGAGCCTTaGAGAAGGAAGTTGCGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LCFSVNHTHWIKHQRFTFFVEEP*RRKLRL Trigger: CAACCGCAACTTCCTTCTCCAAGGCTCCTCCACAAA...AAAAGTAAACCTTTGGTGTTTTATCCAGTGGGTGTGGTTCACACTAAAACAAAG 42% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| CDS-3UTR CCA 90 bp | CTTTGTTTTAGTGTGAACCACACCCACTGGATAAAACACCAAAGGTTTACTTTTTCTATAGTTTGTACCTaGCTCCTTTGCTTCTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LCFSVNHTHWIKHQRFTFSIVCT*LLCFWS Trigger: GGACCAGAAGCAAAGGAGCCAGGTACAAACTATAGA...AAAAGTAAACCTTTGGTGTTTTATCCAGTGGGTGTGGTTCACACTAAAACAAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| CDS GCA 90 bp | CTCGGGGCCCACTCGTGCCCTTCTCCACCTCCTGGCCCGGCGCTCTaGAGTGCGGAGGGTCTCCTCTGGATCGCTACTGTCGGAAGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LGAHSCPSPPPGPAL*SAEGLLWIATVGSL Trigger: GAGACTTCCGACAGTAGCGATCCAGAGGAGACCCTCCGCACTGCAGAGCGCCGGGCCAGGAGGTGGAGAAGGGCACGAGTGGGCCCCGAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048121.13 ENSMUST00000214784.2 |
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| CDS CCA 90 bp | GTGGGGCCAGGTTTGTTCCGTCCAGTCCATCCATGCTCCTCCAGCTaGGCAGAGCGGCCTCCTCCAGCAGACGCTGGGCGCGGTCCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: VGPGLFRPVHPCSSS*AERPPPADAGRGPW Trigger: CCAAGGACCGCGCCCAGCGTCTGCTGGAGGAGGCCGCTCTGCCCAGCTGGAGGAGCATGGATGGACTGGACGGAACAAACCTGGCCCCAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048121.13 ENSMUST00000214784.2 |
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| CDS GCA 90 bp | CAGCCACCTGGTCCTCCAGGTCTGCCAGCTCCGTCTCGCCAGTGCTaGTGTGGATGCAGCGGGCAGCGTCTTCCAGCTCACTCAGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: QPPGPPGLPAPSRQC*CGCSGQRLPAHSAG Trigger: GCCAGCTGAGTGAGCTGGAAGACGCTGCCCGCTGCATCCACAGCAGCACTGGCGAGACGGAGCTGGCAGACCTGGAGGACCAGGTGGCTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| CDS GCA 90 bp | CTGCAGCCACCTGGTCCTCCAGGTCTGCCAGCTCCGTCTCGCCAGTaGTGCTGTGGATGCAGCGGGCAGCGTCTTCCAGCTCACTCAGCT | + |
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Preference number: 5 (lower is better) Translates to: LQPPGPPGLPAPSRQ*CCGCSGQRLPAHSA Trigger: AGCTGAGTGAGCTGGAAGACGCTGCCCGCTGCATCCACAGCAGCACTGGCGAGACGGAGCTGGCAGACCTGGAGGACCAGGTGGCTGCAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| CDS GCA 90 bp | GATGTCCGAGATCTGGAGTTCGGCGTGGTGCACCTGGGCTGCAGCTaGAGCCACCTGGTCCTCCAGGTCTGCCAGCTCCGTCTCGCCAGT | + |
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Preference number: 5 (lower is better) Translates to: DVRDLEFGVVHLGCS*SHLVLQVCQLRLAS Trigger: ACTGGCGAGACGGAGCTGGCAGACCTGGAGGACCAGGTGGCTGCAGCTGCAGCCCAGGTGCACCACGCCGAACTCCAGATCTCGGACATC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| CDS GCA 90 bp | GCTCTCGATGTCCGAGATCTGGAGTTCGGCGTGGTGCACCTGGGCTaGAGCTGCAGCCACCTGGTCCTCCAGGTCTGCCAGCTCCGTCTC | + |
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Preference number: 5 (lower is better) Translates to: ALDVRDLEFGVVHLG*SCSHLVLQVCQLRL Trigger: GAGACGGAGCTGGCAGACCTGGAGGACCAGGTGGCTGCAGCTGCAGCCCAGGTGCACCACGCCGAACTCCAGATCTCGGACATCGAGAGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| CDS CCA 90 bp | TCTCCACCTCCTGGCCCGGCGCTCTGCAGTGCGGAGGGTCTCCTCTaGATCGCTACTGTCGGAAGTCTCTCCACCGGCTGCCTGAGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: SPPPGPALCSAEGLL*IATVGSLSTGCLRV Trigger: AACCCTCAGGCAGCCGGTGGAGAGACTTCCGACAGTAGCGATCCAGAGGAGACCCTCCGCACTGCAGAGCGCCGGGCCAGGAGGTGGAGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048121.13 ENSMUST00000214784.2 |
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| CDS TCA 90 bp | GAGGTGGCTAAGGGACCTTGGCCAGAACTCTGGGCCTGTGTAGGCTaGGGCTGGGGTTGCTTGAGCCTGCTCTGGGACGGTGGGCACAGC | + |
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Preference number: 5 (lower is better) Translates to: EVAKGPWPELWACVG*GWGCLSLLWDGGHS Trigger: GCTGTGCCCACCGTCCCAGAGCAGGCTCAAGCAACCCCAGCCTCAGCCTACACAGGCCCAGAGTTCTGGCCAAGGTCCCTTAGCCACCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048121.13 ENSMUST00000214784.2 |
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| CDS CCA 90 bp | CGTGGTCCCCTCACCCCTGGCCTTCACACTGCCACTCTGGGACCGTaGCCACTCTGGCTCCTCCTCCTCAGCTCGCAGCTCAGCTTTATC | + |
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Preference number: 5 (lower is better) Translates to: RGPLTPGLHTATLGP*PLWLLLLSSQLSFI Trigger: GATAAAGCTGAGCTGCGAGCTGAGGAGGAGGAGCCAGAGTGGCCACGGTCCCAGAGTGGCAGTGTGAAGGCCAGGGGTGAGGGGACCACG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048121.13 ENSMUST00000214784.2 |
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| CDS CCA 90 bp | AGCTGGGCAGAGCGGCCTCCTCCAGCAGACGCTGGGCGCGGTCCTTaGGTGACCTTGGTGCAGCCTCTGCTGAACCAGACTTCAGAGCAT | + |
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Preference number: 5 (lower is better) Translates to: SWAERPPPADAGRGP*VTLVQPLLNQTSEH Trigger: ATGCTCTGAAGTCTGGTTCAGCAGAGGCTGCACCAAGGTCACCCAAGGACCGCGCCCAGCGTCTGCTGGAGGAGGCCGCTCTGCCCAGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048121.13 ENSMUST00000214784.2 |
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| CDS GCA 90 bp | AAGGGCGAGCAGCACCGCATGCAGCAGCGCTCCACGAACTTCTGGTaGTTCGAGAGGATGCTGCACTTGCTGTTCTCCTCGGCCAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: KGEQHRMQQRSTNFW*FERMLHLLFSSASL Trigger: GAGGCTGGCCGAGGAGAACAGCAAGTGCAGCATCCTCTCGAAGCACCAGAAGTTCGTGGAGCGCTGCTGCATGCGGTGCTGCTCGCCCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048121.13 ENSMUST00000133173.3 ENSMUST00000214784.2 |
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| CDS CCA 90 bp | GTGAAGGGCGAGCAGCACCGCATGCAGCAGCGCTCCACGAACTTCTaGTGCTTCGAGAGGATGCTGCACTTGCTGTTCTCCTCGGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VKGEQHRMQQRSTNF*CFERMLHLLFSSAS Trigger: GCTGGCCGAGGAGAACAGCAAGTGCAGCATCCTCTCGAAGCACCAGAAGTTCGTGGAGCGCTGCTGCATGCGGTGCTGCTCGCCCTTCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048121.13 ENSMUST00000133173.3 ENSMUST00000214784.2 |
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| CDS CCA 90 bp | CACTGGACGCCACCTCCAGGGCCTGAAAGGTCCCACTCTTCGGTTTaGTCAGCAGGCGGGTTGGGGGCTGTCTACTACCGTCCTTCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: HWTPPPGPERSHSSV*SAGGLGAVYYRPSR Trigger: CCTTGAAGGACGGTAGTAGACAGCCCCCAACCCGCCTGCTGACCAAACCGAAGAGTGGGACCTTTCAGGCCCTGGAGGTGGCGTCCAGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048121.13 ENSMUST00000214784.2 |
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| CDS-3UTR CAA 90 bp | ACAAAACTGGACACACTGTGCCCTCCAGAACCAGCACCTAATGGCCACCCCCTCCAGCGGCGCCTGGCGTaGACCAGGAAGGTGAAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: TKLDTLCPPEPAPNGHPLQRRLA*TRKVKG Trigger: GCCCTTCACCTTCCTGGTCAACGCCAGGCGCCGCTG...GAGGGGGTGGCCATTAGGTGCTGGTTCTGGAGGGCACAGTGTGTCCAGTTTTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| CDS-3UTR CAA 90 bp | CGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGTCCTTGGGTGACCTaGGTGCAGCCTCTGCTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: RWLLGQGTVVYGRRQWVTGPWVT*VQPLLN Trigger: GTTCAGCAGAGGCTGCACCAAGGTCACCCAAGGACC...AGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| CDS CCA 90 bp | CTCACCCCTGGCCTTCACACTGCCACTCTGGGACCGTGGCCACTCTaGCTCCTCCTCCTCAGCTCGCAGCTCAGCTTTATCCTTCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LTPGLHTATLGPWPL*LLLLSSQLSFILLL Trigger: AAGCAGAAGGATAAAGCTGAGCTGCGAGCTGAGGAGGAGGAGCCAGAGTGGCCACGGTCCCAGAGTGGCAGTGTGAAGGCCAGGGGTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048121.13 ENSMUST00000214784.2 |
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| CDS GCA 90 bp | ACCGCATGCAGCAGCGCTCCACGAACTTCTGGTGCTTCGAGAGGATaGTGCACTTGCTGTTCTCCTCGGCCAGCCTCTGCTTCATCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: TACSSAPRTSGASRG*CTCCSPRPASASSH Trigger: GTGAGATGAAGCAGAGGCTGGCCGAGGAGAACAGCAAGTGCAGCATCCTCTCGAAGCACCAGAAGTTCGTGGAGCGCTGCTGCATGCGGT 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048121.13 ENSMUST00000133173.3 ENSMUST00000214784.2 |
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| CDS CCA 90 bp | CCAGGCTGTCCCCATGGGATTCTGCTTTGGAAATGGCCTCCTCGATaGCCTCTTCTGCCACTCGTAGGGCCACAGCCAAGGTGTCCATCA | + |
|
Preference number: 5 (lower is better) Translates to: PGCPHGILLWKWPPR*PLLPLVGPQPRCPS Trigger: TGATGGACACCTTGGCTGTGGCCCTACGAGTGGCAGAAGAGGCCATCGAGGAGGCCATTTCCAAAGCAGAATCCCATGGGGACAGCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048121.13 ENSMUST00000214784.2 |
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| CDS CCA 90 bp | CAGGGCCTGAAAGGTCCCACTCTTCGGTTTGGTCAGCAGGCGGGTTaGGGGCTGTCTACTACCGTCCTTCAAGGTCATCCAGTTCCCATC | + |
|
Preference number: 5 (lower is better) Translates to: QGLKGPTLRFGQQAG*GLSTTVLQGHPVPI Trigger: GATGGGAACTGGATGACCTTGAAGGACGGTAGTAGACAGCCCCCAACCCGCCTGCTGACCAAACCGAAGAGTGGGACCTTTCAGGCCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048121.13 ENSMUST00000214784.2 |
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| CDS-3UTR CAA 90 bp | GTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCTGTGTGCACTGCCAAAGCGCTaGAAGCGGCTTTTCACATTG | + |
|
Preference number: 5 (lower is better) Translates to: VGSRHCRVRPEAVGHWLCALPKR*KRLFTL Trigger: CAATGTGAAAAGCCGCTTCAAGCGCTTTGGCAGTGC...ACACAGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| CDS-3UTR CAA 90 bp | CGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTAAGGACGTCAGCTGCTaGTCCAGTCTCACTTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: RWLLGQGTVVYGRRQWVTKDVSC*SSLTWS Trigger: AGACCAAGTGAGACTGGACAAGCAGCTGACGTCCTT...AGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| CDS GCA 90 bp | AGCAGCGCTCCACGAACTTCTGGTGCTTCGAGAGGATGCTGCACTTaGTGTTCTCCTCGGCCAGCCTCTGCTTCATCTCACTTAGCCGGT | + |
|
Preference number: 5 (lower is better) Translates to: SSAPRTSGASRGCCT*CSPRPASASSHLAG Trigger: ACCGGCTAAGTGAGATGAAGCAGAGGCTGGCCGAGGAGAACAGCAAGTGCAGCATCCTCTCGAAGCACCAGAAGTTCGTGGAGCGCTGCT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048121.13 ENSMUST00000133173.3 |
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| CDS GCA 90 bp | TGGCCTCTTCTGCCACTCGTAGGGCCACAGCCAAGGTGTCCATCATaGTGTGCCCTTCTGACTGCCTGTAGAACGTGGAGTCACTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: WPLLPLVGPQPRCPS*CALLTACRTWSHFL Trigger: CAGGAAGTGACTCCACGTTCTACAGGCAGTCAGAAGGGCACAGCATGATGGACACCTTGGCTGTGGCCCTACGAGTGGCAGAAGAGGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048121.13 ENSMUST00000133173.3 ENSMUST00000214784.2 |
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| CDS GCA 90 bp | GCACACACGGTGCTATGTTTAAGCCAGCGATGGTCAGGGCTGAAATaGGGCTCTCGATGTCCGAGATCTGGAGTTCGGCGTGGTGCACCT | + |
|
Preference number: 5 (lower is better) Translates to: AHTVLCLSQRWSGLK*GSRCPRSGVRRGAP Trigger: AGGTGCACCACGCCGAACTCCAGATCTCGGACATCGAGAGCCGCATTTCAGCCCTGACCATCGCTGGCTTAAACATAGCACCGTGTGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| CDS CCA 90 bp | CGTTCTGTTTGTCCAGGCTGTCCCCATGGGATTCTGCTTTGGAAATaGCCTCCTCGATGGCCTCTTCTGCCACTCGTAGGGCCACAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: RSVCPGCPHGILLWK*PPRWPLLPLVGPQP Trigger: TGGCTGTGGCCCTACGAGTGGCAGAAGAGGCCATCGAGGAGGCCATTTCCAAAGCAGAATCCCATGGGGACAGCCTGGACAAACAGAACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048121.13 ENSMUST00000214784.2 |
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| CDS CCA 90 bp | TGGCCTCGTTCTGTTTGTCCAGGCTGTCCCCATGGGATTCTGCTTTaGAAATGGCCTCCTCGATGGCCTCTTCTGCCACTCGTAGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: WPRSVCPGCPHGILL*KWPPRWPLLPLVGP Trigger: TGGCCCTACGAGTGGCAGAAGAGGCCATCGAGGAGGCCATTTCCAAAGCAGAATCCCATGGGGACAGCCTGGACAAACAGAACGAGGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048121.13 ENSMUST00000214784.2 |
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| CDS CCA 90 bp | ACCGTCCTTCAAGGTCATCCAGTTCCCATCGGGGCTCTGCAAAAGTaGGGCCAGGTTTGTTCCGTCCAGTCCATCCATGCTCCTCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: TVLQGHPVPIGALQK*GQVCSVQSIHAPPA Trigger: AGCTGGAGGAGCATGGATGGACTGGACGGAACAAACCTGGCCCCACTTTTGCAGAGCCCCGATGGGAACTGGATGACCTTGAAGGACGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048121.13 ENSMUST00000214784.2 |
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| CDS CCA 90 bp | CTTCCTCACTGTCGGAACCGATCTCATCATAGGCAGACGTCACACTaGACGCCACCTCCAGGGCCTGAAAGGTCCCACTCTTCGGTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LPHCRNRSHHRQTSH*TPPPGPERSHSSVW Trigger: CCAAACCGAAGAGTGGGACCTTTCAGGCCCTGGAGGTGGCGTCCAGTGTGACGTCTGCCTATGATGAGATCGGTTCCGACAGTGAGGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048121.13 ENSMUST00000214784.2 |
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| CDS CCA 90 bp | CTTCCCGAGATGAGCTGGTGGAAGATGTCTCTGAATCCGAGCACATaGCCTCAGGGTTTGAGGGAGAGGTGGCTAAGGGACCTTGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LPEMSWWKMSLNPST*PQGLRERWLRDLGQ Trigger: CTGGCCAAGGTCCCTTAGCCACCTCTCCCTCAAACCCTGAGGCCATGTGCTCGGATTCAGAGACATCTTCCACCAGCTCATCTCGGGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048121.13 ENSMUST00000214784.2 |
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| CDS CCA 90 bp | GTCTGTCCCAAGAGGAAACATCCCGTTTTCTCTGTCAGTGGAGACTaGGGGGATCTCCCAGGGCCCTGCAGACTCTGCGATCAACTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: VCPKRKHPVFSVSGD*GDLPGPCRLCDQLL Trigger: GAGGAGTTGATCGCAGAGTCTGCAGGGCCCTGGGAGATCCCCCCAGTCTCCACTGACAGAGAAAACGGGATGTTTCCTCTTGGGACAGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| CDS-3UTR CAA 90 bp | ACAAAACTGGACACACTGTGCCCTCCAGAACCAGCACCTAATGGCCACCCCCTCACATGGCCTCAGGGTTaGAGGGAGAGGTGGCTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: TKLDTLCPPEPAPNGHPLTWPQG*RERWLR Trigger: CCTTAGCCACCTCTCCCTCAAACCCTGAGGCCATGT...GAGGGGGTGGCCATTAGGTGCTGGTTCTGGAGGGCACAGTGTGTCCAGTTTTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| CDS GCA 90 bp | GCATGCAGCAGCGCTCCACGAACTTCTGGTGCTTCGAGAGGATGCTaGACTTGCTGTTCTCCTCGGCCAGCCTCTGCTTCATCTCACTTA | + |
|
Preference number: 5 (lower is better) Translates to: ACSSAPRTSGASRGC*TCCSPRPASASSHL Trigger: TAAGTGAGATGAAGCAGAGGCTGGCCGAGGAGAACAGCAAGTGCAGCATCCTCTCGAAGCACCAGAAGTTCGTGGAGCGCTGCTGCATGC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048121.13 ENSMUST00000133173.3 |
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| CDS GCA 90 bp | ACGGTGCCCGCTGCCAGGTACACGTTTTCTTCCAAGGACGTCAGCTaGTTGTCCAGTCTCACTTGGTCTGTCCCAAGAGGAAACATCCCG | + |
|
Preference number: 5 (lower is better) Translates to: TVPAARYTFSSKDVS*LSSLTWSVPRGNIP Trigger: CGGGATGTTTCCTCTTGGGACAGACCAAGTGAGACTGGACAAGCAGCTGACGTCCTTGGAAGAAAACGTGTACCTGGCAGCGGGCACCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| CDS CCA 90 bp | CTGTGTAGGCTGAGGCTGGGGTTGCTTGAGCCTGCTCTGGGACGGTaGGCACAGCTTACTCAAGGCTTCGCTGTAATCAAAGTCTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LCRLRLGLLEPALGR*AQLTQGFAVIKVFL Trigger: GAGGAAGACTTTGATTACAGCGAAGCCTTGAGTAAGCTGTGCCCACCGTCCCAGAGCAGGCTCAAGCAACCCCAGCCTCAGCCTACACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048121.13 ENSMUST00000214784.2 |
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| CDS CCA 90 bp | GGCCAGCCTCTGCTTCATCTCACTGAGATGCTGGCGACTTGCATGTaGATGAAAGACCATCATCTTCTCTTGCGCGCGCTCGACTGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GQPLLHLTEMLATCM*MKDHHLLLRALDWP Trigger: TGGCCAGTCGAGCGCGCGCAAGAGAAGATGATGGTCTTTCATCCACATGCAAGTCGCCAGCATCTCAGTGAGATGAAGCAGAGGCTGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214784.2 |
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| CDS-3UTR CAA 90 bp | TCCACACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGCCATGGGATTCTGCTTaGGAAATGGCCTCCTCGATG | + |
|
Preference number: 5 (lower is better) Translates to: STQYSMAVGSRHCRVRPEPWDSA*EMASSM Trigger: CATCGAGGAGGCCATTTCCAAAGCAGAATCCCATGG...CTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTGTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| CDS-3UTR CAA 90 bp | CACAAACATCAGCAGGAGCATCATAGGAAGACACAAGGACCCCCATCAGCAGCAGTCCCACTCTTCGGTTaGGTCAGCAGGCGGGTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: HKHQQEHHRKTQGPPSAAVPLFG*VSRRVG Trigger: CCCAACCCGCCTGCTGACCAAACCGAAGAGTGGGAC...TGCTGCTGATGGGGGTCCTTGTGTCTTCCTATGATGCTCCTGCTGATGTTTGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| CDS-3UTR CAA 90 bp | AAGGGGGTGGGGTTGCTGACCACCTTTATCATGGCTGTCATTCGGAATCTTGTTTCCACTGCGGGGTTCTaGGGGGCCTTCCTCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: KGVGLLTTFIMAVIRNLVSTAGF*GAFLCS Trigger: GCTGCAGAGGAAGGCCCCCAAGAACCCCGCAGTGGA...AACAAGATTCCGAATGACAGCCATGATAAAGGTGGTCAGCAACCCCACCCCCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| CDS-3UTR CAA 90 bp | GATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGAACTCCTCGGTAGCATaGATGACCTTCAGGACTTCT | + |
|
Preference number: 5 (lower is better) Translates to: DGCWVKALSCTAGGSGSLNSSVA*MTFRTS Trigger: AGAAGTCCTGAAGGTCATCAATGCTACCGAGGAGTT...CAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| CDS CCA 90 bp | CGGTCCTCCTCCTTTTTGCGAAGATTGAAGTCTCTCTGCACCACTTaGAGAACATGCTCGGTCTCATCGTCGGTCAGACCCGACAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: RSSSFLRRLKSLCTT*RTCSVSSSVRPDRS Trigger: GGACCTGTCGGGTCTGACCGACGATGAGACCGAGCATGTTCTCCAAGTGGTGCAGAGAGACTTCAATCTTCGCAAAAAGGAGGAGGACCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048121.13 ENSMUST00000133173.3 |
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| CDS CCA 90 bp | GAACCAGACTTCAGAGCATCTTCCATAGTGAAGGAGAATGCAGACTaGGACCGCCTGAAGGTGGCACGTGCTTTGTGTCGTCCTGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: EPDFRASSIVKENAD*DRLKVARALCRPGG Trigger: CCCTCCAGGACGACACAAAGCACGTGCCACCTTCAGGCGGTCCCAGTCTGCATTCTCCTTCACTATGGAAGATGCTCTGAAGTCTGGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048121.13 ENSMUST00000214784.2 |
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| CDS-3UTR CAA 90 bp | TGGAGGTGGCCAAGCATTTTCCAAATGAGACTGTTTCTAGTGCCCCCTGCTCTTAGGCTGAGGCTGGGGTaGCTTGAGCCTGCTCTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: WRWPSIFQMRLFLVPPALRLRLG*LEPALG Trigger: TCCCAGAGCAGGCTCAAGCAACCCCAGCCTCAGCCT...AAGAGCAGGGGGCACTAGAAACAGTCTCATTTGGAAAATGCTTGGCCACCTCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| CDS-3UTR CAA 90 bp | ACAAAACTGGACACACTGTGCCCTCCAGAACCAGCACCTAATGGCCACCCCCTCCTTGTCCAGTCTCACTaGGTCTGTCCCAAGAGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: TKLDTLCPPEPAPNGHPLLVQSH*VCPKRK Trigger: TTTCCTCTTGGGACAGACCAAGTGAGACTGGACAAG...GAGGGGGTGGCCATTAGGTGCTGGTTCTGGAGGGCACAGTGTGTCCAGTTTTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| CDS GCA 90 bp | TCCTTTTTGCGAAGATTGAAGTCTCTCTGCACCACTTGGAGAACATaGTCGGTCTCATCGTCGGTCAGACCCGACAGGTCCAGCTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SFLRRLKSLCTTWRT*SVSSSVRPDRSSFL Trigger: GAGGAAGCTGGACCTGTCGGGTCTGACCGACGATGAGACCGAGCATGTTCTCCAAGTGGTGCAGAGAGACTTCAATCTTCGCAAAAAGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048121.13 ENSMUST00000133173.3 |
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| CDS GCA 90 bp | TCACTTAGCCGGTCCTCCTCCTTTTTGCGAAGATTGAAGTCTCTCTaGACCACTTGGAGAACATGCTCGGTCTCATCGTCGGTCAGACCC | + |
|
Preference number: 5 (lower is better) Translates to: SLSRSSSFLRRLKSL*TTWRTCSVSSSVRP Trigger: GGGTCTGACCGACGATGAGACCGAGCATGTTCTCCAAGTGGTGCAGAGAGACTTCAATCTTCGCAAAAAGGAGGAGGACCGGCTAAGTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048121.13 ENSMUST00000133173.3 |
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| CDS CCA 90 bp | TTGGTGTCACCGGTACTTGCTGTGGGCCTGTTTGTGGAGGAGCCTTaGAGAAGGAAGTTGCGGTTGAATGTCTTAATGGGGGTCACGGAA | + |
|
Preference number: 5 (lower is better) Translates to: LVSPVLAVGLFVEEP*RRKLRLNVLMGVTE Trigger: TTCCGTGACCCCCATTAAGACATTCAACCGCAACTTCCTTCTCCAAGGCTCCTCCACAAACAGGCCCACAGCAAGTACCGGTGACACCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| CDS-3UTR CAA 90 bp | CACAAACATCAGCAGGAGCATCATAGGAAGACACAAGGACCCCCATCAGCAGCAGGCTCCATCAAGTCCTaGGTGTCACCGGTACTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: HKHQQEHHRKTQGPPSAAGSIKS*VSPVLA Trigger: AGCAAGTACCGGTGACACCAAGGACTTGATGGAGCC...TGCTGCTGATGGGGGTCCTTGTGTCTTCCTATGATGCTCCTGCTGATGTTTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| CDS TCA 90 bp | TTTCTCAGCTTCTCCTCTACTGAGTCCGTGCTGGACCGGGAATTCTaGGTCTCGTTGCTGATGTCAGTCTCTGACACGTTGTCTGACACC | + |
|
Preference number: 5 (lower is better) Translates to: FLSFSSTESVLDREF*VSLLMSVSDTLSDT Trigger: GGTGTCAGACAACGTGTCAGAGACTGACATCAGCAACGAGACTCAGAATTCCCGGTCCAGCACGGACTCAGTAGAGGAGAAGCTGAGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| CDS TCA 90 bp | TGCTGCACTTGCTGTTCTCCTCGGCCAGCCTCTGCTTCATCTCACTaGGATGCTGGCGACTTGCATGTGGATGAAAGACCATCATCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: CCTCCSPRPASASSH*DAGDLHVDERPSSS Trigger: AGAAGATGATGGTCTTTCATCCACATGCAAGTCGCCAGCATCTCAGTGAGATGAAGCAGAGGCTGGCCGAGGAGAACAGCAAGTGCAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214784.2 |
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| CDS CCA 90 bp | TGCTGCCTCGACGTGTCTATAGTTTGTACCTGGCTCCTTTGCTTCTaGTCCCGTCTTCGTGTGAGACGCACACACGGTGCTATGTTTAAG | + |
|
Preference number: 5 (lower is better) Translates to: CCLDVSIVCTWLLCF*SRLRVRRTHGAMFK Trigger: CTTAAACATAGCACCGTGTGTGCGTCTCACACGAAGACGGGACCAGAAGCAAAGGAGCCAGGTACAAACTATAGACACGTCGAGGCAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| CDS-3UTR CAA 90 bp | ACAAAACTGGACACACTGTGCCCTCCAGAACCAGCACCTAATGGCCACCCCCTCTCCTTTTTGCGAAGATaGAAGTCTCTCTGCACCACT | + |
|
Preference number: 5 (lower is better) Translates to: TKLDTLCPPEPAPNGHPLSFLRR*KSLCTT Trigger: AGTGGTGCAGAGAGACTTCAATCTTCGCAAAAAGGA...GAGGGGGTGGCCATTAGGTGCTGGTTCTGGAGGGCACAGTGTGTCCAGTTTTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| CDS-3UTR CAA 90 bp | TCCAATCTGAGGATGCATAGGAGAACCAGAGAACTTGGAAGTGAAGACAGGGCTCCTCAGAAGCCTGGCTaGCTGGCAGACACAGCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: SNLRMHRRTRELGSEDRAPQKPG*LADTAN Trigger: GTTTGCTGTGTCTGCCAGCAAGCCAGGCTTCTGAGG...AGCCCTGTCTTCACTTCCAAGTTCTCTGGTTCTCCTATGCATCCTCAGATTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| CDS-3UTR CAA 90 bp | AAGGGGGTGGGGTTGCTGACCACCTTTATCATGGCTGTCATTCGGAATCTTGTTAGGTTCTTCAGGACCTaGGCACTGCCAAAGCGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: KGVGLLTTFIMAVIRNLVRFFRT*ALPKRL Trigger: CAAGCGCTTTGGCAGTGCCAAGGTCCTGAAGAACCT...AACAAGATTCCGAATGACAGCCATGATAAAGGTGGTCAGCAACCCCACCCCCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| CDS-3UTR CAA 90 bp | ACAAAACTGGACACACTGTGCCCTCCAGAACCAGCACCTAATGGCCACCCCCTCCCTTGGAGAAGGAAGTaGCGGTTGAATGTCTTAATG | + |
|
Preference number: 5 (lower is better) Translates to: TKLDTLCPPEPAPNGHPLPWRRK*RLNVLM Trigger: CATTAAGACATTCAACCGCAACTTCCTTCTCCAAGG...GAGGGGGTGGCCATTAGGTGCTGGTTCTGGAGGGCACAGTGTGTCCAGTTTTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| CDS-3UTR CAA 90 bp | AAGGGGGTGGGGTTGCTGACCACCTTTATCATGGCTGTCATTCGGAATCTTGTTTTGCTGTGGGCCTGTTaGTGGAGGAGCCTTGGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: KGVGLLTTFIMAVIRNLVLLWAC*WRSLGE Trigger: TTCTCCAAGGCTCCTCCACAAACAGGCCCACAGCAA...AACAAGATTCCGAATGACAGCCATGATAAAGGTGGTCAGCAACCCCACCCCCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| CDS CCA 90 bp | CCAAGGTGTCCATCATGCTGTGCCCTTCTGACTGCCTGTAGAACGTaGAGTCACTTCCTGAAATGCTCCCTTCATTCTCCAGGTTTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: PRCPSCCALLTACRT*SHFLKCSLHSPGLV Trigger: AACCAAACCTGGAGAATGAAGGGAGCATTTCAGGAAGTGACTCCACGTTCTACAGGCAGTCAGAAGGGCACAGCATGATGGACACCTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048121.13 ENSMUST00000133173.3 ENSMUST00000214784.2 |
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| CDS TCA 90 bp | TCTGCTTCATCTCACTTAGCCGGTCCTCCTCCTTTTTGCGAAGATTaGAGTCTCTCTGCACCACTTGGAGAACATGCTCGGTCTCATCGT | + |
|
Preference number: 5 (lower is better) Translates to: SASSHLAGPPPFCED*SLSAPLGEHARSHR Trigger: ACGATGAGACCGAGCATGTTCTCCAAGTGGTGCAGAGAGACTTCAATCTTCGCAAAAAGGAGGAGGACCGGCTAAGTGAGATGAAGCAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048121.13 ENSMUST00000133173.3 |
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| CDS GCA 90 bp | TGTGCCCTTCTGACTGCCTGTAGAACGTGGAGTCACTTCCTGAAATaGTCCCTTCATTCTCCAGGTTTGGTTCAAACAATCCTCCTCCTA | + |
|
Preference number: 5 (lower is better) Translates to: CALLTACRTWSHFLK*SLHSPGLVQTILLL Trigger: TAGGAGGAGGATTGTTTGAACCAAACCTGGAGAATGAAGGGAGCATTTCAGGAAGTGACTCCACGTTCTACAGGCAGTCAGAAGGGCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048121.13 ENSMUST00000133173.3 ENSMUST00000214784.2 |
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| CDS-3UTR CAA 90 bp | CTTTGTTTTAGTGTGAACCACACCCACTGGATAAAACACCAAAGGTTTACTTTTAAGGTGGCACGTGCTTaGTGTCGTCCTGGAGGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LCFSVNHTHWIKHQRFTFKVARA*CRPGGA Trigger: GGCCCCTCCAGGACGACACAAAGCACGTGCCACCTT...AAAAGTAAACCTTTGGTGTTTTATCCAGTGGGTGTGGTTCACACTAAAACAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| CDS-3UTR CAA 90 bp | AGAAGCCGTCAGAGATCGCATCCTTCCTGTCCTCATTTTCTTAGACCATCAAAAGTTTGTGGAGGAGCCTaGGAGAAGGAAGTTGCGGTT | + |
|
Preference number: 5 (lower is better) Translates to: RSRQRSHPSCPHFLRPSKVCGGA*EKEVAV Trigger: AACCGCAACTTCCTTCTCCAAGGCTCCTCCACAAAC...TTTTGATGGTCTAAGAAAATGAGGACAGGAAGGATGCGATCTCTGACGGCTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| CDS-3UTR CAA 90 bp | AGAAGCCGTCAGAGATCGCATCCTTCCTGTCCTCATTTTCTTAGACCATCAAAACGGTCCTCCTCCTTTTaGCGAAGATTGAAGTCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: RSRQRSHPSCPHFLRPSKRSSSF*RRLKSL Trigger: GAGAGACTTCAATCTTCGCAAAAAGGAGGAGGACCG...TTTTGATGGTCTAAGAAAATGAGGACAGGAAGGATGCGATCTCTGACGGCTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| CDS-3UTR CAA 90 bp | GTCTTATTGTGTGCATGGACACACTTTAGATACTCATGCATTTATTTCAGCCCCCGACGTGTCTATAGTTaGTACCTGGCTCCTTTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: VLLCAWTHFRYSCIYFSPRRVYS*YLAPLL Trigger: AAGCAAAGGAGCCAGGTACAAACTATAGACACGTCG...GGGGCTGAAATAAATGCATGAGTATCTAAAGTGTGTCCATGCACACAATAAGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| CDS GCA 72 bp | CACTCGTGCCCTTCTCCACCTCCTGGCCCGGCGCTCTaGAGTGCGGAGGGTCTCCTCTGGATCGCTACTGTC | + |
|
Preference number: 6 (lower is better) Translates to: HSCPSPPPGPAL*SAEGLLWIATV Trigger: GACAGTAGCGATCCAGAGGAGACCCTCCGCACTGCAGAGCGCCGGGCCAGGAGGTGGAGAAGGGCACGAGTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048121.13 ENSMUST00000214784.2 |
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| CDS GCA 72 bp | GGTCCTCCAGGTCTGCCAGCTCCGTCTCGCCAGTGCTaGTGTGGATGCAGCGGGCAGCGTCTTCCAGCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: GPPGLPAPSRQC*CGCSGQRLPAH Trigger: GTGAGCTGGAAGACGCTGCCCGCTGCATCCACAGCAGCACTGGCGAGACGGAGCTGGCAGACCTGGAGGACC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| CDS GCA 72 bp | CCTGGTCCTCCAGGTCTGCCAGCTCCGTCTCGCCAGTaGTGCTGTGGATGCAGCGGGCAGCGTCTTCCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: PGPPGLPAPSRQ*CCGCSGQRLPA Trigger: AGCTGGAAGACGCTGCCCGCTGCATCCACAGCAGCACTGGCGAGACGGAGCTGGCAGACCTGGAGGACCAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| CDS CCA 72 bp | GAGCGGCCTCCTCCAGCAGACGCTGGGCGCGGTCCTTaGGTGACCTTGGTGCAGCCTCTGCTGAACCAGACT | + |
|
Preference number: 6 (lower is better) Translates to: ERPPPADAGRGP*VTLVQPLLNQT Trigger: AGTCTGGTTCAGCAGAGGCTGCACCAAGGTCACCCAAGGACCGCGCCCAGCGTCTGCTGGAGGAGGCCGCTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048121.13 ENSMUST00000214784.2 |
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| CDS CAA 72 bp | AGAGCGGCCTCCTCCAGCAGACGCTGGGCGCGGTCCTaGGGTGACCTTGGTGCAGCCTCTGCTGAACCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: RAASSSRRWARS*GDLGAASAEPD Trigger: GTCTGGTTCAGCAGAGGCTGCACCAAGGTCACCCAAGGACCGCGCCCAGCGTCTGCTGGAGGAGGCCGCTCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048121.13 ENSMUST00000214784.2 |
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| CDS CAA 72 bp | CCCGTGGATGGGCACCAGGTGAAGGCAGACCCCTGTTaGACTCCTCGGGGCCCACTCGTGCCCTTCTCCACC | + |
|
Preference number: 6 (lower is better) Translates to: PVDGHQVKADPC*TPRGPLVPFST Trigger: GGTGGAGAAGGGCACGAGTGGGCCCCGAGGAGTCAAACAGGGGTCTGCCTTCACCTGGTGCCCATCCACGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| CDS CAA 90 bp | CAGCTGGGCAGAGCGGCCTCCTCCAGCAGACGCTGGGCGCGGTCCTaGGGTGACCTTGGTGCAGCCTCTGCTGAACCAGACTTCAGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: QLGRAASSSRRWARS*GDLGAASAEPDFRA Trigger: TGCTCTGAAGTCTGGTTCAGCAGAGGCTGCACCAAGGTCACCCAAGGACCGCGCCCAGCGTCTGCTGGAGGAGGCCGCTCTGCCCAGCTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048121.13 ENSMUST00000214784.2 |
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| CDS CCA 72 bp | ATGCGGCTCTCGATGTCCGAGATCTGGAGTTCGGCGTaGTGCACCTGGGCTGCAGCTGCAGCCACCTGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: MRLSMSEIWSSA*CTWAAAAATWS Trigger: GGACCAGGTGGCTGCAGCTGCAGCCCAGGTGCACCACGCCGAACTCCAGATCTCGGACATCGAGAGCCGCAT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| CDS GCA 72 bp | ATCTTCTCCACTGCGGGGTTCTTGGGGGCCTTCCTCTaGAGCCAGGACAGCTTAGCCCGGCAGCCAGCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: IFSTAGFLGAFL*SQDSLARQPAS Trigger: GGAAGCTGGCTGCCGGGCTAAGCTGTCCTGGCTGCAGAGGAAGGCCCCCAAGAACCCCGCAGTGGAGAAGAT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048121.13 ENSMUST00000214784.2 |
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| CDS CAA 90 bp | GGGACCTTGGCCAGAACTCTGGGCCTGTGTAGGCTGAGGCTGGGGTaGCTTGAGCCTGCTCTGGGACGGTGGGCACAGCTTACTCAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: GTLARTLGLCRLRLG*LEPALGRWAQLTQG Trigger: GCCTTGAGTAAGCTGTGCCCACCGTCCCAGAGCAGGCTCAAGCAACCCCAGCCTCAGCCTACACAGGCCCAGAGTTCTGGCCAAGGTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048121.13 ENSMUST00000214784.2 |
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| CDS TCA 72 bp | AAGGGACCTTGGCCAGAACTCTGGGCCTGTGTAGGCTaGGGCTGGGGTTGCTTGAGCCTGCTCTGGGACGGT | + |
|
Preference number: 6 (lower is better) Translates to: KGPWPELWACVG*GWGCLSLLWDG Trigger: ACCGTCCCAGAGCAGGCTCAAGCAACCCCAGCCTCAGCCTACACAGGCCCAGAGTTCTGGCCAAGGTCCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048121.13 ENSMUST00000214784.2 |
||
| CDS CAA 72 bp | CCTCCAGCAGACGCTGGGCGCGGTCCTTGGGTGACCTaGGTGCAGCCTCTGCTGAACCAGACTTCAGAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: PPADAGRGPWVT*VQPLLNQTSEH Trigger: ATGCTCTGAAGTCTGGTTCAGCAGAGGCTGCACCAAGGTCACCCAAGGACCGCGCCCAGCGTCTGCTGGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048121.13 ENSMUST00000214784.2 |
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| CDS GCA 72 bp | ACTCAGCTGGCCCTCCAGCCCATACACGGTGCCCGCTaGCAGGTACACGTTTTCTTCCAAGGACGTCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: TQLALQPIHGAR*QVHVFFQGRQL Trigger: CAGCTGACGTCCTTGGAAGAAAACGTGTACCTGGCAGCGGGCACCGTGTATGGGCTGGAGGGCCAGCTGAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| CDS GCA 72 bp | AGCAGCGCTCCACGAACTTCTGGTGCTTCGAGAGGATaGTGCACTTGCTGTTCTCCTCGGCCAGCCTCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: SSAPRTSGASRG*CTCCSPRPASA Trigger: AGCAGAGGCTGGCCGAGGAGAACAGCAAGTGCAGCATCCTCTCGAAGCACCAGAAGTTCGTGGAGCGCTGCT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048121.13 ENSMUST00000133173.3 ENSMUST00000214784.2 |
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| CDS GCA 72 bp | CAGCACCGCATGCAGCAGCGCTCCACGAACTTCTGGTaGTTCGAGAGGATGCTGCACTTGCTGTTCTCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: QHRMQQRSTNFW*FERMLHLLFSS Trigger: CGAGGAGAACAGCAAGTGCAGCATCCTCTCGAAGCACCAGAAGTTCGTGGAGCGCTGCTGCATGCGGTGCTG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048121.13 ENSMUST00000133173.3 ENSMUST00000214784.2 |
||
| CDS CCA 72 bp | GAGCAGCACCGCATGCAGCAGCGCTCCACGAACTTCTaGTGCTTCGAGAGGATGCTGCACTTGCTGTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: EQHRMQQRSTNF*CFERMLHLLFS Trigger: GGAGAACAGCAAGTGCAGCATCCTCTCGAAGCACCAGAAGTTCGTGGAGCGCTGCTGCATGCGGTGCTGCTC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048121.13 ENSMUST00000133173.3 ENSMUST00000214784.2 |
||
| CDS CCA 72 bp | CCCCATGGGATTCTGCTTTGGAAATGGCCTCCTCGATaGCCTCTTCTGCCACTCGTAGGGCCACAGCCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: PHGILLWKWPPR*PLLPLVGPQPR Trigger: CCTTGGCTGTGGCCCTACGAGTGGCAGAAGAGGCCATCGAGGAGGCCATTTCCAAAGCAGAATCCCATGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048121.13 ENSMUST00000214784.2 |
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| CDS CCA 72 bp | CCTCAGTTAGCTCTTGCTTGTGGTCCCGCAGGTAGCTaGCCTCGTTCTGTTTGTCCAGGCTGTCCCCATGGG | + |
|
Preference number: 6 (lower is better) Translates to: PQLALACGPAGS*PRSVCPGCPHG Trigger: CCCATGGGGACAGCCTGGACAAACAGAACGAGGCCAGCTACCTGCGGGACCACAAGCAAGAGCTAACTGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048121.13 ENSMUST00000214784.2 |
||
| CDS CAA 90 bp | CTGGCCTCGTTCTGTTTGTCCAGGCTGTCCCCATGGGATTCTGCTTaGGAAATGGCCTCCTCGATGGCCTCTTCTGCCACTCGTAGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: LASFCLSRLSPWDSA*EMASSMASSATRRA Trigger: GGCCCTACGAGTGGCAGAAGAGGCCATCGAGGAGGCCATTTCCAAAGCAGAATCCCATGGGGACAGCCTGGACAAACAGAACGAGGCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048121.13 ENSMUST00000214784.2 |
||
| CDS CAA 90 bp | CCAGGGCCTGAAAGGTCCCACTCTTCGGTTTGGTCAGCAGGCGGGTaGGGGGCTGTCTACTACCGTCCTTCAAGGTCATCCAGTTCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: PGPERSHSSVWSAGG*GAVYYRPSRSSSSH Trigger: ATGGGAACTGGATGACCTTGAAGGACGGTAGTAGACAGCCCCCAACCCGCCTGCTGACCAAACCGAAGAGTGGGACCTTTCAGGCCCTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048121.13 ENSMUST00000214784.2 |
||
| CDS CAA 90 bp | AGCTGGTGGAAGATGTCTCTGAATCCGAGCACATGGCCTCAGGGTTaGAGGGAGAGGTGGCTAAGGGACCTTGGCCAGAACTCTGGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: SWWKMSLNPSTWPQG*RERWLRDLGQNSGP Trigger: AGGCCCAGAGTTCTGGCCAAGGTCCCTTAGCCACCTCTCCCTCAAACCCTGAGGCCATGTGCTCGGATTCAGAGACATCTTCCACCAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048121.13 ENSMUST00000214784.2 |
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| CDS TCA 72 bp | TTGCTGATGTCAGTCTCTGACACGTTGTCTGACACCTaGGCCGTGTGCAGTGCCCGTGGATGGGCACCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: LLMSVSDTLSDT*AVCSARGWAPG Trigger: ACCTGGTGCCCATCCACGGGCACTGCACACGGCTCAGGTGTCAGACAACGTGTCAGAGACTGACATCAGCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
||
| CDS GCA 72 bp | AGCGCTCCACGAACTTCTGGTGCTTCGAGAGGATGCTaGACTTGCTGTTCTCCTCGGCCAGCCTCTGCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: SAPRTSGASRGC*TCCSPRPASAS Trigger: TGAAGCAGAGGCTGGCCGAGGAGAACAGCAAGTGCAGCATCCTCTCGAAGCACCAGAAGTTCGTGGAGCGCT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048121.13 ENSMUST00000133173.3 ENSMUST00000214784.2 |
||
| CDS GCA 72 bp | CTGCCACTCGTAGGGCCACAGCCAAGGTGTCCATCATaGTGTGCCCTTCTGACTGCCTGTAGAACGTGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: LPLVGPQPRCPS*CALLTACRTWS Trigger: ACTCCACGTTCTACAGGCAGTCAGAAGGGCACAGCATGATGGACACCTTGGCTGTGGCCCTACGAGTGGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048121.13 ENSMUST00000133173.3 ENSMUST00000214784.2 |
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| CDS CCA 72 bp | TGTCCAGGCTGTCCCCATGGGATTCTGCTTTGGAAATaGCCTCCTCGATGGCCTCTTCTGCCACTCGTAGGG | + |
|
Preference number: 6 (lower is better) Translates to: CPGCPHGILLWK*PPRWPLLPLVG Trigger: CCCTACGAGTGGCAGAAGAGGCCATCGAGGAGGCCATTTCCAAAGCAGAATCCCATGGGGACAGCCTGGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048121.13 ENSMUST00000214784.2 |
||
| CDS GCA 72 bp | CCACGAACTTCTGGTGCTTCGAGAGGATGCTGCACTTaGTGTTCTCCTCGGCCAGCCTCTGCTTCATCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: PRTSGASRGCCT*CSPRPASASSH Trigger: GTGAGATGAAGCAGAGGCTGGCCGAGGAGAACAGCAAGTGCAGCATCCTCTCGAAGCACCAGAAGTTCGTGG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048121.13 ENSMUST00000133173.3 ENSMUST00000214784.2 |
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| CDS CCA 72 bp | CAAGGTCATCCAGTTCCCATCGGGGCTCTGCAAAAGTaGGGCCAGGTTTGTTCCGTCCAGTCCATCCATGCT | + |
|
Preference number: 6 (lower is better) Translates to: QGHPVPIGALQK*GQVCSVQSIHA Trigger: AGCATGGATGGACTGGACGGAACAAACCTGGCCCCACTTTTGCAGAGCCCCGATGGGAACTGGATGACCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048121.13 ENSMUST00000214784.2 |
||
| CDS CAA 90 bp | CCGGTCCTCCTCCTTTTTGCGAAGATTGAAGTCTCTCTGCACCACTaGGAGAACATGCTCGGTCTCATCGTCGGTCAGACCCGACAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: PVLLLFAKIEVSLHH*ENMLGLIVGQTRQV Trigger: GACCTGTCGGGTCTGACCGACGATGAGACCGAGCATGTTCTCCAAGTGGTGCAGAGAGACTTCAATCTTCGCAAAAAGGAGGAGGACCGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048121.13 ENSMUST00000133173.3 |
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| CDS CAA 90 bp | CTGACTCCAGATCAGGCTCCATCAAGTCCTTGGTGTCACCGGTACTaGCTGTGGGCCTGTTTGTGGAGGAGCCTTGGAGAAGGAAGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: LTPDQAPSSPWCHRY*LWACLWRSLGEGSC Trigger: GCAACTTCCTTCTCCAAGGCTCCTCCACAAACAGGCCCACAGCAAGTACCGGTGACACCAAGGACTTGATGGAGCCTGATCTGGAGTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
||
| CDS TCA 72 bp | GTACCTGGCTCCTTTGCTTCTGGTCCCGTCTTCGTGTaGGACGCACACACGGTGCTATGTTTAAGCCAGCGA | + |
|
Preference number: 6 (lower is better) Translates to: VPGSFASGPVFV*DAHTVLCLSQR Trigger: TCGCTGGCTTAAACATAGCACCGTGTGTGCGTCTCACACGAAGACGGGACCAGAAGCAAAGGAGCCAGGTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| CDS GCA 72 bp | CGAAGATTGAAGTCTCTCTGCACCACTTGGAGAACATaGTCGGTCTCATCGTCGGTCAGACCCGACAGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: RRLKSLCTTWRT*SVSSSVRPDRS Trigger: GGACCTGTCGGGTCTGACCGACGATGAGACCGAGCATGTTCTCCAAGTGGTGCAGAGAGACTTCAATCTTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048121.13 ENSMUST00000133173.3 |
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| CDS GCA 72 bp | AGGATGCTGCACTTGCTGTTCTCCTCGGCCAGCCTCTaGTTCATCTCACTTAGCCGGTCCTCCTCCTTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: RMLHLLFSSASL*FISLSRSSSFL Trigger: CAAAAAGGAGGAGGACCGGCTAAGTGAGATGAAGCAGAGGCTGGCCGAGGAGAACAGCAAGTGCAGCATCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048121.13 ENSMUST00000133173.3 |
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| CDS GCA 72 bp | CTCGTTCTGTTTGTCCAGGCTGTCCCCATGGGATTCTaGTTTGGAAATGGCCTCCTCGATGGCCTCTTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LVLFVQAVPMGF*FGNGLLDGLFC Trigger: GCAGAAGAGGCCATCGAGGAGGCCATTTCCAAAGCAGAATCCCATGGGGACAGCCTGGACAAACAGAACGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048121.13 ENSMUST00000214784.2 |
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| CDS GCA 72 bp | GTGCTATGTTTAAGCCAGCGATGGTCAGGGCTGAAATaGGGCTCTCGATGTCCGAGATCTGGAGTTCGGCGT | + |
|
Preference number: 6 (lower is better) Translates to: VLCLSQRWSGLK*GSRCPRSGVRR Trigger: ACGCCGAACTCCAGATCTCGGACATCGAGAGCCGCATTTCAGCCCTGACCATCGCTGGCTTAAACATAGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| CDS GCA 72 bp | ATCAGGCTCCATCAAGTCCTTGGTGTCACCGGTACTTaGTGTGGGCCTGTTTGTGGAGGAGCCTTGGAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: IRLHQVLGVTGT*CGPVCGGALEK Trigger: CTTCTCCAAGGCTCCTCCACAAACAGGCCCACAGCAAGTACCGGTGACACCAAGGACTTGATGGAGCCTGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| CDS CCA 72 bp | CACTCCAGAGACTGTGTCCTCAGAAGCCTGGCTTGCTaGCAGACACAGCAAACCCATAGCTTCTCGTGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: HSRDCVLRSLAC*QTQQTHSFSCF Trigger: GAAGCACGAGAAGCTATGGGTTTGCTGTGTCTGCCAGCAAGCCAGGCTTCTGAGGACACAGTCTCTGGAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048121.13 ENSMUST00000133173.3 ENSMUST00000214784.2 |
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| CDS CCA 72 bp | TCTGTTTGTCCAGGCTGTCCCCATGGGATTCTGCTTTaGAAATGGCCTCCTCGATGGCCTCTTCTGCCACTC | + |
|
Preference number: 6 (lower is better) Translates to: SVCPGCPHGILL*KWPPRWPLLPL Trigger: GAGTGGCAGAAGAGGCCATCGAGGAGGCCATTTCCAAAGCAGAATCCCATGGGGACAGCCTGGACAAACAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048121.13 ENSMUST00000214784.2 |
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| CDS CCA 72 bp | CCCTGGTTGTTCTCCTCAGAAGAGAGACTTCCCTTCTaGTTCTTAGGTTCCGCCTTGGACTCGGACTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: PWLFSSEERLPF*FLGSALDSDSW Trigger: CCAGGAGTCCGAGTCCAAGGCGGAACCTAAGAACCAGAAGGGAAGTCTCTCTTCTGAGGAGAACAACCAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| CDS CCA 72 bp | TCACAGCTGACTCCAGATCAGGCTCCATCAAGTCCTTaGTGTCACCGGTACTTGCTGTGGGCCTGTTTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: SQLTPDQAPSSP*CHRYLLWACLW Trigger: CCACAAACAGGCCCACAGCAAGTACCGGTGACACCAAGGACTTGATGGAGCCTGATCTGGAGTCAGCTGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| CDS CAA 72 bp | GAAGAGAGACTTCCCTTCTGGTTCTTAGGTTCCGCCTaGGACTCGGACTCCTGGTCCTCCCCAGAAGAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: EERLPFWFLGSA*DSDSWSSPEEV Trigger: GACTTCTTCTGGGGAGGACCAGGAGTCCGAGTCCAAGGCGGAACCTAAGAACCAGAAGGGAAGTCTCTCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| CDS CAA 72 bp | GATCAGGCTCCATCAAGTCCTTGGTGTCACCGGTACTaGCTGTGGGCCTGTTTGTGGAGGAGCCTTGGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: DQAPSSPWCHRY*LWACLWRSLGE Trigger: TTCTCCAAGGCTCCTCCACAAACAGGCCCACAGCAAGTACCGGTGACACCAAGGACTTGATGGAGCCTGATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| CDS CAA 90 bp | GTGCCCGCTGCCAGGTACACGTTTTCTTCCAAGGACGTCAGCTGCTaGTCCAGTCTCACTTGGTCTGTCCCAAGAGGAAACATCCCGTTT | + |
|
Preference number: 6 (lower is better) Translates to: VPAARYTFSSKDVSC*SSLTWSVPRGNIPF Trigger: AAACGGGATGTTTCCTCTTGGGACAGACCAAGTGAGACTGGACAAGCAGCTGACGTCCTTGGAAGAAAACGTGTACCTGGCAGCGGGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| CDS CAA 90 bp | CTTGGTGTCACCGGTACTTGCTGTGGGCCTGTTTGTGGAGGAGCCTaGGAGAAGGAAGTTGCGGTTGAATGTCTTAATGGGGGTCACGGA | + |
|
Preference number: 6 (lower is better) Translates to: LGVTGTCCGPVCGGA*EKEVAVECLNGGHG Trigger: TCCGTGACCCCCATTAAGACATTCAACCGCAACTTCCTTCTCCAAGGCTCCTCCACAAACAGGCCCACAGCAAGTACCGGTGACACCAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| CDS GCA 72 bp | GCTGCCAGGTACACGTTTTCTTCCAAGGACGTCAGCTaGTTGTCCAGTCTCACTTGGTCTGTCCCAAGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: AARYTFSSKDVS*LSSLTWSVPRG Trigger: TCCTCTTGGGACAGACCAAGTGAGACTGGACAAGCAGCTGACGTCCTTGGAAGAAAACGTGTACCTGGCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
||
| CDS CCA 72 bp | GACGTGTCTATAGTTTGTACCTGGCTCCTTTGCTTCTaGTCCCGTCTTCGTGTGAGACGCACACACGGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: DVSIVCTWLLCF*SRLRVRRTHGA Trigger: AGCACCGTGTGTGCGTCTCACACGAAGACGGGACCAGAAGCAAAGGAGCCAGGTACAAACTATAGACACGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| CDS CCA 72 bp | CCGGTACTTGCTGTGGGCCTGTTTGTGGAGGAGCCTTaGAGAAGGAAGTTGCGGTTGAATGTCTTAATGGGG | + |
|
Preference number: 6 (lower is better) Translates to: PVLAVGLFVEEP*RRKLRLNVLMG Trigger: CCCCATTAAGACATTCAACCGCAACTTCCTTCTCCAAGGCTCCTCCACAAACAGGCCCACAGCAAGTACCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| CDS CCA 72 bp | ATGAAAGACCATCATCTTCTCTTGCGCGCGCTCGACTaGCCAGGAAGAACGACGCTGCAACAGGATCCTTCN | + |
|
Preference number: 6 (lower is better) Translates to: MKDHHLLLRALD*PGRTTLQQDPS Trigger: NGAAGGATCCTGTTGCAGCGTCGTTCTTCCTGGCCAGTCGAGCGCGCGCAAGAGAAGATGATGGTCTTTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214784.2 |
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| CDS CAA 72 bp | TTCTGTTTGTCCAGGCTGTCCCCATGGGATTCTGCTTaGGAAATGGCCTCCTCGATGGCCTCTTCTGCCACT | + |
|
Preference number: 6 (lower is better) Translates to: FCLSRLSPWDSA*EMASSMASSAT Trigger: AGTGGCAGAAGAGGCCATCGAGGAGGCCATTTCCAAAGCAGAATCCCATGGGGACAGCCTGGACAAACAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048121.13 ENSMUST00000214784.2 |
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| CDS CAA 72 bp | GGCCCTGCAGACTCTGCGATCAACTCCTCGGTAGCATaGATGACCTTCAGGACTTCTGTGGAGATGTTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: GPADSAINSSVA*MTFRTSVEMLQ Trigger: CTGCAACATCTCCACAGAAGTCCTGAAGGTCATCAATGCTACCGAGGAGTTGATCGCAGAGTCTGCAGGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| CDS CAA 90 bp | TCGGCCAGCCTCTGCTTCATCTCACTTAGCCGGTCCTCCTCCTTTTaGCGAAGATTGAAGTCTCTCTGCACCACTTGGAGAACATGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: SASLCFISLSRSSSF*RRLKSLCTTWRTCS Trigger: CGAGCATGTTCTCCAAGTGGTGCAGAGAGACTTCAATCTTCGCAAAAAGGAGGAGGACCGGCTAAGTGAGATGAAGCAGAGGCTGGCCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048121.13 ENSMUST00000133173.3 |
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| CDS TCA 72 bp | TTCTCCTCTACTGAGTCCGTGCTGGACCGGGAATTCTaGGTCTCGTTGCTGATGTCAGTCTCTGACACGTTG | + |
|
Preference number: 6 (lower is better) Translates to: FSSTESVLDREF*VSLLMSVSDTL Trigger: CAACGTGTCAGAGACTGACATCAGCAACGAGACTCAGAATTCCCGGTCCAGCACGGACTCAGTAGAGGAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
||
| CDS GCA 72 bp | CGGTCCTCCTCCTTTTTGCGAAGATTGAAGTCTCTCTaGACCACTTGGAGAACATGCTCGGTCTCATCGTCG | + |
|
Preference number: 6 (lower is better) Translates to: RSSSFLRRLKSL*TTWRTCSVSSS Trigger: CGACGATGAGACCGAGCATGTTCTCCAAGTGGTGCAGAGAGACTTCAATCTTCGCAAAAAGGAGGAGGACCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048121.13 ENSMUST00000133173.3 |
||
| CDS GCA 72 bp | ACCAGACTTCAGAGCATCTTCCATAGTGAAGGAGAATaGAGACTGGGACCGCCTGAAGGTGGCACGTGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: TRLQSIFHSEGE*RLGPPEGGTCF Trigger: AAAGCACGTGCCACCTTCAGGCGGTCCCAGTCTGCATTCTCCTTCACTATGGAAGATGCTCTGAAGTCTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048121.13 ENSMUST00000214784.2 |
||
| CDS CCA 72 bp | TTCAGAGCATCTTCCATAGTGAAGGAGAATGCAGACTaGGACCGCCTGAAGGTGGCACGTGCTTTGTGTCGT | + |
|
Preference number: 6 (lower is better) Translates to: FRASSIVKENAD*DRLKVARALCR Trigger: ACGACACAAAGCACGTGCCACCTTCAGGCGGTCCCAGTCTGCATTCTCCTTCACTATGGAAGATGCTCTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048121.13 ENSMUST00000214784.2 |
||
| CDS CCA 72 bp | CTGCTTCATCTCACTGAGATGCTGGCGACTTGCATGTaGATGAAAGACCATCATCTTCTCTTGCGCGCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LLHLTEMLATCM*MKDHHLLLRAL Trigger: GAGCGCGCGCAAGAGAAGATGATGGTCTTTCATCCACATGCAAGTCGCCAGCATCTCAGTGAGATGAAGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214784.2 |
||
| CDS CAA 72 bp | GCCAGGTACACGTTTTCTTCCAAGGACGTCAGCTGCTaGTCCAGTCTCACTTGGTCTGTCCCAAGAGGAAAC | + |
|
Preference number: 6 (lower is better) Translates to: ARYTFSSKDVSC*SSLTWSVPRGN Trigger: GTTTCCTCTTGGGACAGACCAAGTGAGACTGGACAAGCAGCTGACGTCCTTGGAAGAAAACGTGTACCTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
||
| CDS CAA 72 bp | ACCGGTACTTGCTGTGGGCCTGTTTGTGGAGGAGCCTaGGAGAAGGAAGTTGCGGTTGAATGTCTTAATGGG | + |
|
Preference number: 6 (lower is better) Translates to: TGTCCGPVCGGA*EKEVAVECLNG Trigger: CCCATTAAGACATTCAACCGCAACTTCCTTCTCCAAGGCTCCTCCACAAACAGGCCCACAGCAAGTACCGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
||
| CDS CAA 90 bp | ATCTCCCAGGGCCCTGCAGACTCTGCGATCAACTCCTCGGTAGCATaGATGACCTTCAGGACTTCTGTGGAGATGTTGCAGAGAGAAACA | + |
|
Preference number: 6 (lower is better) Translates to: ISQGPADSAINSSVA*MTFRTSVEMLQRET Trigger: TGTTTCTCTCTGCAACATCTCCACAGAAGTCCTGAAGGTCATCAATGCTACCGAGGAGTTGATCGCAGAGTCTGCAGGGCCCTGGGAGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
||
| CDS CAA 90 bp | CTCTGCTTCATCTCACTTAGCCGGTCCTCCTCCTTTTTGCGAAGATaGAAGTCTCTCTGCACCACTTGGAGAACATGCTCGGTCTCATCG | + |
|
Preference number: 6 (lower is better) Translates to: LCFISLSRSSSFLRR*KSLCTTWRTCSVSS Trigger: CGATGAGACCGAGCATGTTCTCCAAGTGGTGCAGAGAGACTTCAATCTTCGCAAAAAGGAGGAGGACCGGCTAAGTGAGATGAAGCAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048121.13 ENSMUST00000133173.3 |
||
| CDS CAA 90 bp | AGAACGTGGAGTCACTTCCTGAAATGCTCCCTTCATTCTCCAGGTTaGGTTCAAACAATCCTCCTCCTAGGATGTCGAAGCAGGCACCGC | + |
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Preference number: 6 (lower is better) Translates to: RTWSHFLKCSLHSPG*VQTILLLGCRSRHR Trigger: GCGGTGCCTGCTTCGACATCCTAGGAGGAGGATTGTTTGAACCAAACCTGGAGAATGAAGGGAGCATTTCAGGAAGTGACTCCACGTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048121.13 ENSMUST00000133173.3 ENSMUST00000214784.2 |
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| CDS CAA 90 bp | GTACTTGCTGTGGGCCTGTTTGTGGAGGAGCCTTGGAGAAGGAAGTaGCGGTTGAATGTCTTAATGGGGGTCACGGAAGATGCTTCGATT | + |
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Preference number: 6 (lower is better) Translates to: VLAVGLFVEEPWRRK*RLNVLMGVTEDASI Trigger: AATCGAAGCATCTTCCGTGACCCCCATTAAGACATTCAACCGCAACTTCCTTCTCCAAGGCTCCTCCACAAACAGGCCCACAGCAAGTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| CDS TCA 72 bp | TCTCACTTAGCCGGTCCTCCTCCTTTTTGCGAAGATTaGAGTCTCTCTGCACCACTTGGAGAACATGCTCGG | + |
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Preference number: 6 (lower is better) Translates to: SHLAGPPPFCED*SLSAPLGEHAR Trigger: CCGAGCATGTTCTCCAAGTGGTGCAGAGAGACTTCAATCTTCGCAAAAAGGAGGAGGACCGGCTAAGTGAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048121.13 ENSMUST00000133173.3 |
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| CDS GCA 72 bp | CAGCCTCTGCTTCATCTCACTGAGATGCTGGCGACTTaGATGTGGATGAAAGACCATCATCTTCTCTTGCGC | + |
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Preference number: 6 (lower is better) Translates to: QPLLHLTEMLAT*MWMKDHHLLLR Trigger: GCGCAAGAGAAGATGATGGTCTTTCATCCACATGCAAGTCGCCAGCATCTCAGTGAGATGAAGCAGAGGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214784.2 |
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| CDS CCA 72 bp | TCCTTTTTGCGAAGATTGAAGTCTCTCTGCACCACTTaGAGAACATGCTCGGTCTCATCGTCGGTCAGACCC | + |
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Preference number: 6 (lower is better) Translates to: SFLRRLKSLCTT*RTCSVSSSVRP Trigger: GGGTCTGACCGACGATGAGACCGAGCATGTTCTCCAAGTGGTGCAGAGAGACTTCAATCTTCGCAAAAAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048121.13 ENSMUST00000133173.3 |
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| CDS CCA 72 bp | CCATCATGCTGTGCCCTTCTGACTGCCTGTAGAACGTaGAGTCACTTCCTGAAATGCTCCCTTCATTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: PSCCALLTACRT*SHFLKCSLHSP Trigger: TGGAGAATGAAGGGAGCATTTCAGGAAGTGACTCCACGTTCTACAGGCAGTCAGAAGGGCACAGCATGATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048121.13 ENSMUST00000133173.3 ENSMUST00000214784.2 |
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| CDS CAA 72 bp | CTCCTTTTTGCGAAGATTGAAGTCTCTCTGCACCACTaGGAGAACATGCTCGGTCTCATCGTCGGTCAGACC | + |
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Preference number: 6 (lower is better) Translates to: LLFAKIEVSLHH*ENMLGLIVGQT Trigger: GGTCTGACCGACGATGAGACCGAGCATGTTCTCCAAGTGGTGCAGAGAGACTTCAATCTTCGCAAAAAGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048121.13 ENSMUST00000133173.3 |
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| CDS CAA 72 bp | TCCAGACGGTGTTTTCTGTACAGGTTCTTCAGGACCTaGGCACTGCCAAAGCGCTTGAAGCGGCTTTTCACA | + |
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Preference number: 6 (lower is better) Translates to: SRRCFLYRFFRT*ALPKRLKRLFT Trigger: TGTGAAAAGCCGCTTCAAGCGCTTTGGCAGTGCCAAGGTCCTGAAGAACCTGTACAGAAAACACCGTCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048121.13 ENSMUST00000133173.3 ENSMUST00000214784.2 |
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| CDS CAA 72 bp | CTGTTTGTGGAGGAGCCTTGGAGAAGGAAGTTGCGGTaGAATGTCTTAATGGGGGTCACGGAAGATGCTTCG | + |
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Preference number: 6 (lower is better) Translates to: LFVEEPWRRKLR*NVLMGVTEDAS Trigger: CGAAGCATCTTCCGTGACCCCCATTAAGACATTCAACCGCAACTTCCTTCTCCAAGGCTCCTCCACAAACAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| CDS CAA 72 bp | ATCTCACTTAGCCGGTCCTCCTCCTTTTTGCGAAGATaGAAGTCTCTCTGCACCACTTGGAGAACATGCTCG | + |
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Preference number: 6 (lower is better) Translates to: ISLSRSSSFLRR*KSLCTTWRTCS Trigger: CGAGCATGTTCTCCAAGTGGTGCAGAGAGACTTCAATCTTCGCAAAAAGGAGGAGGACCGGCTAAGTGAGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048121.13 ENSMUST00000133173.3 |
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| CDS CAA 72 bp | CTCTGCTTCATCTCACTTAGCCGGTCCTCCTCCTTTTaGCGAAGATTGAAGTCTCTCTGCACCACTTGGAGA | + |
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Preference number: 6 (lower is better) Translates to: LCFISLSRSSSF*RRLKSLCTTWR Trigger: TCTCCAAGTGGTGCAGAGAGACTTCAATCTTCGCAAAAAGGAGGAGGACCGGCTAAGTGAGATGAAGCAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048121.13 ENSMUST00000133173.3 |
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| CDS CAA 72 bp | TTCTTCCAAGGACGTCAGCTGCTTGTCCAGTCTCACTaGGTCTGTCCCAAGAGGAAACATCCCGTTTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: FFQGRQLLVQSH*VCPKRKHPVFS Trigger: AGAGAAAACGGGATGTTTCCTCTTGGGACAGACCAAGTGAGACTGGACAAGCAGCTGACGTCCTTGGAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048121.13 |
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| CDS GCA 72 bp | CTGACTGCCTGTAGAACGTGGAGTCACTTCCTGAAATaGTCCCTTCATTCTCCAGGTTTGGTTCAAACAATC | + |
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Preference number: 6 (lower is better) Translates to: LTACRTWSHFLK*SLHSPGLVQTI Trigger: GATTGTTTGAACCAAACCTGGAGAATGAAGGGAGCATTTCAGGAAGTGACTCCACGTTCTACAGGCAGTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048121.13 ENSMUST00000133173.3 ENSMUST00000214784.2 |
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| CDS CAA 72 bp | AGTCACTTCCTGAAATGCTCCCTTCATTCTCCAGGTTaGGTTCAAACAATCCTCCTCCTAGGATGTCGAAGC | + |
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Preference number: 6 (lower is better) Translates to: SHFLKCSLHSPG*VQTILLLGCRS Trigger: GCTTCGACATCCTAGGAGGAGGATTGTTTGAACCAAACCTGGAGAATGAAGGGAGCATTTCAGGAAGTGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048121.13 ENSMUST00000133173.3 ENSMUST00000214784.2 |
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