Pregenerated sensors for MYPOP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048481Ensembl transcript IDs: ENSMUST00000059331.9, ENSMUST00000131087.2
Found 124 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTCCTCGGAGTCCTCTGCCTTCTATATTCTGATTTGTCTAGCAACTaGCAACCCTTCCGAAGAAGTCTGGGCTGGGGGAGTAGGGAGGTC | + |
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Preference number: 1 (lower is better) Translates to: LLGVLCLLYSDLSSN*QPFRRSLGWGSREV Trigger: GACCTCCCTACTCCCCCAGCCCAGACTTCTTCGGAAGGGTTGGCAGTTGCTAGACAAATCAGAATATAGAAGGCAGAGGACTCCGAGGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| 3UTR GCA 90 bp | ATGAGAGGCAAAGGACCCAACCTATACCTCCCCCAGTCAGAATTCTaGCTCCTCCTCGGAGTCCTCTGCCTTCTATATTCTGATTTGTCT | + |
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Preference number: 1 (lower is better) Translates to: MRGKGPNLYLPQSEF*LLLGVLCLLYSDLS Trigger: AGACAAATCAGAATATAGAAGGCAGAGGACTCCGAGGAGGAGGCAGAATTCTGACTGGGGGAGGTATAGGTTGGGTCCTTTGCCTCTCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| 3UTR-3UTR GCA 90 bp | GAAAGGAAGGGAGGGGCTGAGCTCCGGAGGTCAGACACACCTCGCAGCAATGAGCCCCAGTCAGAATTCTaGCTCCTCCTCGGAGTCCTC | + |
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Preference number: 2 (lower is better) Translates to: ERKGGAELRRSDTPRSNEPQSEF*LLLGVL Trigger: GAGGACTCCGAGGAGGAGGCAGAATTCTGACTGGGG...CTCATTGCTGCGAGGTGTGTCTGACCTCCGGAGCTCAGCCCCTCCCTTCCTTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| 3UTR-3UTR GCA 90 bp | GCAATGAGAGGCAAAGGACCCAACCTATACCTCCCCCAGTCAGAATTCTGCCTCAGCAGGAAGCCAGGGTaGAGCTGGGATAGGCAAAGA | + |
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Preference number: 2 (lower is better) Translates to: AMRGKGPNLYLPQSEFCLSRKPG*SWDRQR Trigger: TCTTTGCCTATCCCAGCTGCACCCTGGCTTCCTGCT...GAGGCAGAATTCTGACTGGGGGAGGTATAGGTTGGGTCCTTTGCCTCTCATTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| 3UTR-3UTR GCA 90 bp | GAAAGGAAGGGAGGGGCTGAGCTCCGGAGGTCAGACACACCTCGCAGCAATGAGCTCCTCGGAGTCCTCTaGCTTCTATATTCTGATTTG | + |
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Preference number: 2 (lower is better) Translates to: ERKGGAELRRSDTPRSNELLGVL*LLYSDL Trigger: CAAATCAGAATATAGAAGGCAGAGGACTCCGAGGAG...CTCATTGCTGCGAGGTGTGTCTGACCTCCGGAGCTCAGCCCCTCCCTTCCTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| 3UTR CAA 90 bp | GAATTCTGCCTCCTCCTCGGAGTCCTCTGCCTTCTATATTCTGATTaGTCTAGCAACTGCCAACCCTTCCGAAGAAGTCTGGGCTGGGGG | + |
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Preference number: 2 (lower is better) Translates to: EFCLLLGVLCLLYSD*SSNCQPFRRSLGWG Trigger: CCCCCAGCCCAGACTTCTTCGGAAGGGTTGGCAGTTGCTAGACAAATCAGAATATAGAAGGCAGAGGACTCCGAGGAGGAGGCAGAATTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| 3UTR-3UTR GCA 90 bp | CTCGGAGTCCTCTGCCTTCTATATTCTGATTTGTCTAGCAACTGCCAACCCTTCAGCAGGAAGCCAGGGTaGAGCTGGGATAGGCAAAGA | + |
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Preference number: 2 (lower is better) Translates to: LGVLCLLYSDLSSNCQPFSRKPG*SWDRQR Trigger: TCTTTGCCTATCCCAGCTGCACCCTGGCTTCCTGCT...GAAGGGTTGGCAGTTGCTAGACAAATCAGAATATAGAAGGCAGAGGACTCCGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| 3UTR-3UTR GCA 90 bp | GCAATGAGAGGCAAAGGACCCAACCTATACCTCCCCCAGTCAGAATTCTGCCTCCTCCTCGGAGTCCTCTaGCTTCTATATTCTGATTTG | + |
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Preference number: 2 (lower is better) Translates to: AMRGKGPNLYLPQSEFCLLLGVL*LLYSDL Trigger: CAAATCAGAATATAGAAGGCAGAGGACTCCGAGGAG...GAGGCAGAATTCTGACTGGGGGAGGTATAGGTTGGGTCCTTTGCCTCTCATTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| 3UTR GCA 72 bp | GTCCTCTGCCTTCTATATTCTGATTTGTCTAGCAACTaGCAACCCTTCCGAAGAAGTCTGGGCTGGGGGAGT | + |
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Preference number: 3 (lower is better) Translates to: VLCLLYSDLSSN*QPFRRSLGWGS Trigger: ACTCCCCCAGCCCAGACTTCTTCGGAAGGGTTGGCAGTTGCTAGACAAATCAGAATATAGAAGGCAGAGGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR CCA 90 bp | CCTCCTCGACTGCGCCTGCGCCAAGCAGGGAGAGGGGTTGCAGGCAGGAGCTTGCAGCGCCGTGGGTGGTaGTGGAGGGGCAGGGAGCGG | + |
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Preference number: 4 (lower is better) Translates to: PPRLRLRQAGRGVAGRSLQRRGW*WRGRER Trigger: CCGCTCCCTGCCCCTCCACCACCACCCACGGCGCTG...CAAGCTCCTGCCTGCAACCCCTCTCCCTGCTTGGCGCAGGCGCAGTCGAGGAGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR CCA 90 bp | CCTCCTCGACTGCGCCTGCGCCAAGCAGGGAGAGGGGTTGCAGGCAGGAGCTTGGGGCCTCGCTCAGTTTaGCCAGTCCCTGCCGAAGGG | + |
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Preference number: 4 (lower is better) Translates to: PPRLRLRQAGRGVAGRSLGPRSV*PVPAEG Trigger: CCCTTCGGCAGGGACTGGCCAAACTGAGCGAGGCCC...CAAGCTCCTGCCTGCAACCCCTCTCCCTGCTTGGCGCAGGCGCAGTCGAGGAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR TCA 90 bp | CCTCCTCGACTGCGCCTGCGCCAAGCAGGGAGAGGGGTTGCAGGCAGGAGCTTGTTGGCAGTCTCCTGCTaGGCCCGCAGGAAGTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: PPRLRLRQAGRGVAGRSLLAVSC*ARRKSR Trigger: CCTGGACTTCCTGCGGGCTCAGCAGGAGACTGCCAA...CAAGCTCCTGCCTGCAACCCCTCTCCCTGCTTGGCGCAGGCGCAGTCGAGGAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR GCA 90 bp | GCCTGCGCCAAGCAGGGAGAGGGGTTGCAGGCAGGAGCTTGGACAAGGGTAGATGCGCCCTGCGTGGAATaGGGCACGCGGGCCAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: ACAKQGEGLQAGAWTRVDAPCVE*GTRASF Trigger: GAAGCTGGCCCGCGTGCCGCATTCCACGCAGGGCGC...ATCTACCCTTGTCCAAGCTCCTGCCTGCAACCCCTCTCCCTGCTTGGCGCAGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR GCA 90 bp | CTCCTCGACTGCGCCTGCGCCAAGCAGGGAGAGGGGTTGCAGGCAGGAGCTTGGTGGCTTCTTGGGGATTaGAAGAGGGCCGGGCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: LLDCACAKQGEGLQAGAWWLLGD*KRAGPR Trigger: CCTGGGCCCGGCCCTCTTGCAATCCCCAAGAAGCCA...CCAAGCTCCTGCCTGCAACCCCTCTCCCTGCTTGGCGCAGGCGCAGTCGAGGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR GCA 90 bp | CCTCCTCGACTGCGCCTGCGCCAAGCAGGGAGAGGGGTTGCAGGCAGGAGCTTGGACAGGCTGCATGGCTaGAGGGGACGTGGACTCACG | + |
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Preference number: 4 (lower is better) Translates to: PPRLRLRQAGRGVAGRSLDRLHG*RGRGLT Trigger: CGTGAGTCCACGTCCCCTGCAGCCATGCAGCCTGTC...CAAGCTCCTGCCTGCAACCCCTCTCCCTGCTTGGCGCAGGCGCAGTCGAGGAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR CCA 90 bp | GGGGCTGAGCTCCGGAGGTCAGACACACCTCGCAGCAATGAGAGGCAAAGGACCAGGGGCAGGGAGCGGTaGAGACAAGGCCAGGCGGGG | + |
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Preference number: 4 (lower is better) Translates to: GAELRRSDTPRSNERQRTRGRER*RQGQAG Trigger: CCCCGCCTGGCCTTGTCTCCACCGCTCCCTGCCCCT...GGTCCTTTGCCTCTCATTGCTGCGAGGTGTGTCTGACCTCCGGAGCTCAGCCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR CCA 90 bp | CCGGGGACTCGCCCAGAGAATCAGGCACTAACTAGCACAGGAAGTGGGGTGCTCCGCCGTGGGTGGTGGTaGAGGGGCAGGGAGCGGTGG | + |
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Preference number: 4 (lower is better) Translates to: PGTRPENQALTSTGSGVLRRGWW*RGRERW Trigger: CCACCGCTCCCTGCCCCTCCACCACCACCCACGGCG...GAGCACCCCACTTCCTGTGCTAGTTAGTGCCTGATTCTCTGGGCGAGTCCCCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR CCA 90 bp | CTCCTCGACTGCGCCTGCGCCAAGCAGGGAGAGGGGTTGCAGGCAGGAGCTTGGCTTGGGGGCAGAGGGTaGCAGGACTGGTTTGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: LLDCACAKQGEGLQAGAWLGGRG*QDWFGR Trigger: CCTCCCAAACCAGTCCTGCCACCCTCTGCCCCCAAG...CCAAGCTCCTGCCTGCAACCCCTCTCCCTGCTTGGCGCAGGCGCAGTCGAGGAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR CCA 90 bp | CCTCCTCGACTGCGCCTGCGCCAAGCAGGGAGAGGGGTTGCAGGCAGGAGCTTGCACAGACACAGGCTCTaGGGCGAGCTCCACCTTGGG | + |
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Preference number: 4 (lower is better) Translates to: PPRLRLRQAGRGVAGRSLHRHRL*GELHLG Trigger: CCCAAGGTGGAGCTCGCCCCAGAGCCTGTGTCTGTG...CAAGCTCCTGCCTGCAACCCCTCTCCCTGCTTGGCGCAGGCGCAGTCGAGGAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR GCA 90 bp | GAAAGGAAGGGAGGGGCTGAGCTCCGGAGGTCAGACACACCTCGCAGCAATGAGGCGCCCTGCGTGGAATaGGGCACGCGGGCCAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: ERKGGAELRRSDTPRSNEAPCVE*GTRASF Trigger: GAAGCTGGCCCGCGTGCCGCATTCCACGCAGGGCGC...CTCATTGCTGCGAGGTGTGTCTGACCTCCGGAGCTCAGCCCCTCCCTTCCTTTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR CCA 90 bp | GGGGCTGAGCTCCGGAGGTCAGACACACCTCGCAGCAATGAGAGGCAAAGGACCGCTTGCGGAGTCGGGTaGTCTCCTCCGCTTCGCCCG | + |
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Preference number: 4 (lower is better) Translates to: GAELRRSDTPRSNERQRTACGVG*SPPLRP Trigger: CGGGCGAAGCGGAGGAGACCACCCGACTCCGCAAGC...GGTCCTTTGCCTCTCATTGCTGCGAGGTGTGTCTGACCTCCGGAGCTCAGCCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR CCA 90 bp | GGGGCTGAGCTCCGGAGGTCAGACACACCTCGCAGCAATGAGAGGCAAAGGACCGGGCGAGCTCCACCTTaGGGGCAGAGGGTGGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: GAELRRSDTPRSNERQRTGRAPP*GQRVAG Trigger: TCCTGCCACCCTCTGCCCCCAAGGTGGAGCTCGCCC...GGTCCTTTGCCTCTCATTGCTGCGAGGTGTGTCTGACCTCCGGAGCTCAGCCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR TCA 90 bp | ACTAGCACAGGAAGTGGGGTGCTCACGCCCCTAGAGCAGGAAGCCAGGGTGCAGGGACTGTTCTGGGGCTaGGGTGGGCCGAGGAGGAGT | + |
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Preference number: 4 (lower is better) Translates to: TSTGSGVLTPLEQEARVQGLFWG*GGPRRS Trigger: ACTCCTCCTCGGCCCACCTCAGCCCCAGAACAGTCC...CTGCACCCTGGCTTCCTGCTCTAGGGGCGTGAGCACCCCACTTCCTGTGCTAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR GCA 90 bp | GCCTGCGCCAAGCAGGGAGAGGGGTTGCAGGCAGGAGCTTGGACAAGGGTAGATGGCAGCTGGACAGGCTaGATGGCTGCAGGGGACGTG | + |
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Preference number: 4 (lower is better) Translates to: ACAKQGEGLQAGAWTRVDGSWTG*MAAGDV Trigger: CACGTCCCCTGCAGCCATGCAGCCTGTCCAGCTGCC...ATCTACCCTTGTCCAAGCTCCTGCCTGCAACCCCTCTCCCTGCTTGGCGCAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR CCA 90 bp | CCGGGGACTCGCCCAGAGAATCAGGCACTAACTAGCACAGGAAGTGGGGTGCTCGCTTGCGGAGTCGGGTaGTCTCCTCCGCTTCGCCCG | + |
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Preference number: 4 (lower is better) Translates to: PGTRPENQALTSTGSGVLACGVG*SPPLRP Trigger: CGGGCGAAGCGGAGGAGACCACCCGACTCCGCAAGC...GAGCACCCCACTTCCTGTGCTAGTTAGTGCCTGATTCTCTGGGCGAGTCCCCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR CCA 90 bp | ACTAGCACAGGAAGTGGGGTGCTCACGCCCCTAGAGCAGGAAGCCAGGGTGCAGGGGCCTCGCTCAGTTTaGCCAGTCCCTGCCGAAGGG | + |
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Preference number: 4 (lower is better) Translates to: TSTGSGVLTPLEQEARVQGPRSV*PVPAEG Trigger: CCCTTCGGCAGGGACTGGCCAAACTGAGCGAGGCCC...CTGCACCCTGGCTTCCTGCTCTAGGGGCGTGAGCACCCCACTTCCTGTGCTAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR CCA 90 bp | GGGGCTGAGCTCCGGAGGTCAGACACACCTCGCAGCAATGAGAGGCAAAGGACCGTGGCAGGACTGGTTTaGGAGGTGGGGGCGGAGGTG | + |
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Preference number: 4 (lower is better) Translates to: GAELRRSDTPRSNERQRTVAGLV*EVGAEV Trigger: CACCTCCGCCCCCACCTCCCAAACCAGTCCTGCCAC...GGTCCTTTGCCTCTCATTGCTGCGAGGTGTGTCTGACCTCCGGAGCTCAGCCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR CCA 90 bp | GGGCTGAGCTCCGGAGGTCAGACACACCTCGCAGCAATGAGAGGCAAAGGACCCGTGGCAGGACTGGTTTaGGAGGTGGGGGCGGAGGTG | + |
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Preference number: 4 (lower is better) Translates to: GLSSGGQTHLAAMRGKGPVAGLV*EVGAEV Trigger: CACCTCCGCCCCCACCTCCCAAACCAGTCCTGCCAC...GGGTCCTTTGCCTCTCATTGCTGCGAGGTGTGTCTGACCTCCGGAGCTCAGCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR GCA 90 bp | GGGGCTGAGCTCCGGAGGTCAGACACACCTCGCAGCAATGAGAGGCAAAGGACCCCCAGGACTCTGGGCTaGTGGAGCCTCCCTTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: GAELRRSDTPRSNERQRTPRTLG*WSLPCS Trigger: AGAGCAAGGGAGGCTCCAGCAGCCCAGAGTCCTGGG...GGTCCTTTGCCTCTCATTGCTGCGAGGTGTGTCTGACCTCCGGAGCTCAGCCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR GCA 90 bp | GGGGCTGAGCTCCGGAGGTCAGACACACCTCGCAGCAATGAGAGGCAAAGGACCAGTTTGGCCAGTCCCTaGCGAAGGGTGCCAGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: GAELRRSDTPRSNERQRTSLASP*RRVPAS Trigger: GCTGGCTGGCACCCTTCGGCAGGGACTGGCCAAACT...GGTCCTTTGCCTCTCATTGCTGCGAGGTGTGTCTGACCTCCGGAGCTCAGCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR CCA 90 bp | ACTAGCACAGGAAGTGGGGTGCTCACGCCCCTAGAGCAGGAAGCCAGGGTGCAGAGGACTCTGGGCTGCTaGAGCCTCCCTTGCTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: TSTGSGVLTPLEQEARVQRTLGC*SLPCSG Trigger: CCCAGAGCAAGGGAGGCTCCAGCAGCCCAGAGTCCT...CTGCACCCTGGCTTCCTGCTCTAGGGGCGTGAGCACCCCACTTCCTGTGCTAGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR CCA 90 bp | GGAGTCCACCCGGGGACTCGCCCAGAGAATCAGGCACTAACTAGCACAGGAAGTGACTGGTTTGGGAGGTaGGGGCGGAGGTGGCGGTGG | + |
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Preference number: 4 (lower is better) Translates to: GVHPGTRPENQALTSTGSDWFGR*GRRWRW Trigger: CCACCGCCACCTCCGCCCCCACCTCCCAAACCAGTC...ACTTCCTGTGCTAGTTAGTGCCTGATTCTCTGGGCGAGTCCCCGGGTGGACTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR TCA 90 bp | ACTAGCACAGGAAGTGGGGTGCTCACGCCCCTAGAGCAGGAAGCCAGGGTGCAGTCGTTCCAACGCTTCTaGACCTCCTGGCCCGTGCGT | + |
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Preference number: 4 (lower is better) Translates to: TSTGSGVLTPLEQEARVQSFQRF*TSWPVR Trigger: ACGCACGGGCCAGGAGGTTCAGAAGCGTTGGAACGA...CTGCACCCTGGCTTCCTGCTCTAGGGGCGTGAGCACCCCACTTCCTGTGCTAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR TCA 90 bp | GAAAGGAAGGGAGGGGCTGAGCTCCGGAGGTCAGACACACCTCGCAGCAATGAGGGGGTAACAGGGCACTaGGGGCCTCGCTCAGTTTGG | + |
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Preference number: 4 (lower is better) Translates to: ERKGGAELRRSDTPRSNEGVTGH*GPRSVW Trigger: CCAAACTGAGCGAGGCCCTCAGTGCCCTGTTACCCC...CTCATTGCTGCGAGGTGTGTCTGACCTCCGGAGCTCAGCCCCTCCCTTCCTTTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR CCA 90 bp | GCAGCAATGAGAGGCAAAGGACCCAACCTATACCTCCCCCAGTCAGAATTCTGCCGCCGTGGGTGGTGGTaGAGGGGCAGGGAGCGGTGG | + |
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Preference number: 4 (lower is better) Translates to: AAMRGKGPNLYLPQSEFCRRGWW*RGRERW Trigger: CCACCGCTCCCTGCCCCTCCACCACCACCCACGGCG...GCAGAATTCTGACTGGGGGAGGTATAGGTTGGGTCCTTTGCCTCTCATTGCTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR TCA 90 bp | GGGGCTGAGCTCCGGAGGTCAGACACACCTCGCAGCAATGAGAGGCAAAGGACCCCTTGGTGCGGCGCTTaGAGTCGTTCCAACGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: GAELRRSDTPRSNERQRTPWCGA*SRSNAS Trigger: AGAAGCGTTGGAACGACTTCAAGCGCCGCACCAAGG...GGTCCTTTGCCTCTCATTGCTGCGAGGTGTGTCTGACCTCCGGAGCTCAGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR TCA 90 bp | GGAGTCCACCCGGGGACTCGCCCAGAGAATCAGGCACTAACTAGCACAGGAAGTGGGGTAACAGGGCACTaGGGGCCTCGCTCAGTTTGG | + |
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Preference number: 4 (lower is better) Translates to: GVHPGTRPENQALTSTGSGVTGH*GPRSVW Trigger: CCAAACTGAGCGAGGCCCTCAGTGCCCTGTTACCCC...ACTTCCTGTGCTAGTTAGTGCCTGATTCTCTGGGCGAGTCCCCGGGTGGACTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR TCA 90 bp | GAGAATCAGGCACTAACTAGCACAGGAAGTGGGGTGCTCACGCCCCTAGAGCAGCGCTCCTGGGGGAGATaGTCACTCCCCTCGCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: ENQALTSTGSGVLTPLEQRSWGR*SLPSLP Trigger: TGGCAGCGAGGGGAGTGATCATCTCCCCCAGGAGCG...CTGCTCTAGGGGCGTGAGCACCCCACTTCCTGTGCTAGTTAGTGCCTGATTCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR GCA 90 bp | GTTGGGGTTACAGGAGGCAGTCAGGCGGACACCACTGTACCAGAGAAAGGGGCTGACAGGCTGCATGGCTaGAGGGGACGTGGACTCACG | + |
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Preference number: 4 (lower is better) Translates to: VGVTGGSQADTTVPEKGADRLHG*RGRGLT Trigger: CGTGAGTCCACGTCCCCTGCAGCCATGCAGCCTGTC...AGCCCCTTTCTCTGGTACAGTGGTGTCCGCCTGACTGCCTCCTGTAACCCCAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR GCA 90 bp | GAGAATCAGGCACTAACTAGCACAGGAAGTGGGGTGCTCACGCCCCTAGAGCAGGGCAGCTGGACAGGCTaGATGGCTGCAGGGGACGTG | + |
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Preference number: 4 (lower is better) Translates to: ENQALTSTGSGVLTPLEQGSWTG*MAAGDV Trigger: CACGTCCCCTGCAGCCATGCAGCCTGTCCAGCTGCC...CTGCTCTAGGGGCGTGAGCACCCCACTTCCTGTGCTAGTTAGTGCCTGATTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR CCA 90 bp | GGAGTCCACCCGGGGACTCGCCCAGAGAATCAGGCACTAACTAGCACAGGAAGTGCTGGACAGGCTGCATaGCTGCAGGGGACGTGGACT | + |
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Preference number: 4 (lower is better) Translates to: GVHPGTRPENQALTSTGSAGQAA*LQGTWT Trigger: AGTCCACGTCCCCTGCAGCCATGCAGCCTGTCCAGC...ACTTCCTGTGCTAGTTAGTGCCTGATTCTCTGGGCGAGTCCCCGGGTGGACTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR GCA 90 bp | GAGAATCAGGCACTAACTAGCACAGGAAGTGGGGTGCTCACGCCCCTAGAGCAGCCCAGGACTCTGGGCTaGTGGAGCCTCCCTTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: ENQALTSTGSGVLTPLEQPRTLG*WSLPCS Trigger: AGAGCAAGGGAGGCTCCAGCAGCCCAGAGTCCTGGG...CTGCTCTAGGGGCGTGAGCACCCCACTTCCTGTGCTAGTTAGTGCCTGATTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR CCA 90 bp | GAGAATCAGGCACTAACTAGCACAGGAAGTGGGGTGCTCACGCCCCTAGAGCAGCTGGGGGTAGTGGTTTaGGCACCCCTTCCTCGCTCC | + |
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Preference number: 4 (lower is better) Translates to: ENQALTSTGSGVLTPLEQLGVVV*APLPRS Trigger: GGAGCGAGGAAGGGGTGCCCAAACCACTACCCCCAG...CTGCTCTAGGGGCGTGAGCACCCCACTTCCTGTGCTAGTTAGTGCCTGATTCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR CCA 90 bp | AAGTTGGGGTTACAGGAGGCAGTCAGGCGGACACCACTGTACCAGAGAAAGGGGCTGGGGGTAGTGGTTTaGGCACCCCTTCCTCGCTCC | + |
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Preference number: 4 (lower is better) Translates to: KLGLQEAVRRTPLYQRKGLGVVV*APLPRS Trigger: GGAGCGAGGAAGGGGTGCCCAAACCACTACCCCCAG...CCCCTTTCTCTGGTACAGTGGTGTCCGCCTGACTGCCTCCTGTAACCCCAACTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR TCA 90 bp | GTTGGGGTTACAGGAGGCAGTCAGGCGGACACCACTGTACCAGAGAAAGGGGCTCCTTGGTGCGGCGCTTaGAGTCGTTCCAACGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VGVTGGSQADTTVPEKGAPWCGA*SRSNAS Trigger: AGAAGCGTTGGAACGACTTCAAGCGCCGCACCAAGG...AGCCCCTTTCTCTGGTACAGTGGTGTCCGCCTGACTGCCTCCTGTAACCCCAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR TCA 90 bp | GCAGCAATGAGAGGCAAAGGACCCAACCTATACCTCCCCCAGTCAGAATTCTGCGGACTGTTCTGGGGCTaGGGTGGGCCGAGGAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: AAMRGKGPNLYLPQSEFCGLFWG*GGPRRS Trigger: ACTCCTCCTCGGCCCACCTCAGCCCCAGAACAGTCC...GCAGAATTCTGACTGGGGGAGGTATAGGTTGGGTCCTTTGCCTCTCATTGCTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR TCA 90 bp | GCAATGAGAGGCAAAGGACCCAACCTATACCTCCCCCAGTCAGAATTCTGCCTCCGCTCCTGGGGGAGATaGTCACTCCCCTCGCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: AMRGKGPNLYLPQSEFCLRSWGR*SLPSLP Trigger: TGGCAGCGAGGGGAGTGATCATCTCCCCCAGGAGCG...GAGGCAGAATTCTGACTGGGGGAGGTATAGGTTGGGTCCTTTGCCTCTCATTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR CCA 90 bp | GGGGCTGAGCTCCGGAGGTCAGACACACCTCGCAGCAATGAGAGGCAAAGGACCTGGACTCACGCTCCTTaGCTTCTTGGGGATTGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: GAELRRSDTPRSNERQRTWTHAP*LLGDCK Trigger: CTTGCAATCCCCAAGAAGCCAAGGAGCGTGAGTCCA...GGTCCTTTGCCTCTCATTGCTGCGAGGTGTGTCTGACCTCCGGAGCTCAGCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR CCA 90 bp | TTCTGCCTCCTCCTCGGAGTCCTCTGCCTTCTATATTCTGATTTGTCTAGCAACCAGCGCCGTGGGTGGTaGTGGAGGGGCAGGGAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: FCLLLGVLCLLYSDLSSNQRRGW*WRGRER Trigger: CCGCTCCCTGCCCCTCCACCACCACCCACGGCGCTG...GTTGCTAGACAAATCAGAATATAGAAGGCAGAGGACTCCGAGGAGGAGGCAGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR TCA 90 bp | CTCGGAGTCCTCTGCCTTCTATATTCTGATTTGTCTAGCAACTGCCAACCCTTCCGAAGCCTGCGGCTGTaGAGAGGCGGCTGCCCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LGVLCLLYSDLSSNCQPFRSLRL*RGGCPG Trigger: TCCCGGGCAGCCGCCTCTTCACAGCCGCAGGCTTCG...GAAGGGTTGGCAGTTGCTAGACAAATCAGAATATAGAAGGCAGAGGACTCCGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR TCA 90 bp | GCAATGAGAGGCAAAGGACCCAACCTATACCTCCCCCAGTCAGAATTCTGCCTCTTGGCAGTCTCCTGCTaGGCCCGCAGGAAGTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AMRGKGPNLYLPQSEFCLLAVSC*ARRKSR Trigger: CCTGGACTTCCTGCGGGCTCAGCAGGAGACTGCCAA...GAGGCAGAATTCTGACTGGGGGAGGTATAGGTTGGGTCCTTTGCCTCTCATTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR GCA 90 bp | GCAATGAGAGGCAAAGGACCCAACCTATACCTCCCCCAGTCAGAATTCTGCCTCCTAGCGGTCGAAGCCTaGGGCTGTGAAGAGGCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: AMRGKGPNLYLPQSEFCLLAVEA*GCEEAA Trigger: AGCCGCCTCTTCACAGCCGCAGGCTTCGACCGCTAG...GAGGCAGAATTCTGACTGGGGGAGGTATAGGTTGGGTCCTTTGCCTCTCATTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR GCA 90 bp | ATGAGAGGCAAAGGACCCAACCTATACCTCCCCCAGTCAGAATTCTGCCTCCTCTGGCTTCTTGGGGATTaGAAGAGGGCCGGGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: MRGKGPNLYLPQSEFCLLWLLGD*KRAGPR Trigger: CCTGGGCCCGGCCCTCTTGCAATCCCCAAGAAGCCA...GAGGAGGCAGAATTCTGACTGGGGGAGGTATAGGTTGGGTCCTTTGCCTCTCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR GCA 90 bp | ATGAGAGGCAAAGGACCCAACCTATACCTCCCCCAGTCAGAATTCTGCCTCCTCAGTTTGGCCAGTCCCTaGCGAAGGGTGCCAGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: MRGKGPNLYLPQSEFCLLSLASP*RRVPAS Trigger: GCTGGCTGGCACCCTTCGGCAGGGACTGGCCAAACT...GAGGAGGCAGAATTCTGACTGGGGGAGGTATAGGTTGGGTCCTTTGCCTCTCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR CCA 90 bp | CTCGGAGTCCTCTGCCTTCTATATTCTGATTTGTCTAGCAACTGCCAACCCTTCAGGGGCAGGGAGCGGTaGAGACAAGGCCAGGCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LGVLCLLYSDLSSNCQPFRGRER*RQGQAG Trigger: CCCCGCCTGGCCTTGTCTCCACCGCTCCCTGCCCCT...GAAGGGTTGGCAGTTGCTAGACAAATCAGAATATAGAAGGCAGAGGACTCCGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR GCA 90 bp | AGCAATGAGAGGCAAAGGACCCAACCTATACCTCCCCCAGTCAGAATTCTGCCTAGGAGAAGCGCGGCTTaGGGAGTCGGGTGGTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SNERQRTQPIPPPVRILPRRSAA*GVGWSP Trigger: AGGAGACCACCCGACTCCGCAAGCCGCGCTTCTCCT...AGGCAGAATTCTGACTGGGGGAGGTATAGGTTGGGTCCTTTGCCTCTCATTGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR CCA 90 bp | AGCAATGAGAGGCAAAGGACCCAACCTATACCTCCCCCAGTCAGAATTCTGCCTAGGACTCTGGGCTGCTaGAGCCTCCCTTGCTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SNERQRTQPIPPPVRILPRTLGC*SLPCSG Trigger: CCCAGAGCAAGGGAGGCTCCAGCAGCCCAGAGTCCT...AGGCAGAATTCTGACTGGGGGAGGTATAGGTTGGGTCCTTTGCCTCTCATTGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR CCA 90 bp | GCAGCAATGAGAGGCAAAGGACCCAACCTATACCTCCCCCAGTCAGAATTCTGCCGCTCCTTGGCTTCTTaGGGATTGCAAGAGGGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: AAMRGKGPNLYLPQSEFCRSLAS*GLQEGR Trigger: CCGGCCCTCTTGCAATCCCCAAGAAGCCAAGGAGCG...GCAGAATTCTGACTGGGGGAGGTATAGGTTGGGTCCTTTGCCTCTCATTGCTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR CCA 90 bp | AGCAATGAGAGGCAAAGGACCCAACCTATACCTCCCCCAGTCAGAATTCTGCCTGCTGGACAGGCTGCATaGCTGCAGGGGACGTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: SNERQRTQPIPPPVRILPAGQAA*LQGTWT Trigger: AGTCCACGTCCCCTGCAGCCATGCAGCCTGTCCAGC...AGGCAGAATTCTGACTGGGGGAGGTATAGGTTGGGTCCTTTGCCTCTCATTGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR CCA 90 bp | CTCGGAGTCCTCTGCCTTCTATATTCTGATTTGTCTAGCAACTGCCAACCCTTCGACTGGTTTGGGAGGTaGGGGCGGAGGTGGCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LGVLCLLYSDLSSNCQPFDWFGR*GRRWRW Trigger: CCACCGCCACCTCCGCCCCCACCTCCCAAACCAGTC...GAAGGGTTGGCAGTTGCTAGACAAATCAGAATATAGAAGGCAGAGGACTCCGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR CCA 90 bp | CTCGGAGTCCTCTGCCTTCTATATTCTGATTTGTCTAGCAACTGCCAACCCTTCGGGCGAGCTCCACCTTaGGGGCAGAGGGTGGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LGVLCLLYSDLSSNCQPFGRAPP*GQRVAG Trigger: TCCTGCCACCCTCTGCCCCCAAGGTGGAGCTCGCCC...GAAGGGTTGGCAGTTGCTAGACAAATCAGAATATAGAAGGCAGAGGACTCCGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR TCA 90 bp | AGCAATGAGAGGCAAAGGACCCAACCTATACCTCCCCCAGTCAGAATTCTGCCTTCGTTCCAACGCTTCTaGACCTCCTGGCCCGTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: SNERQRTQPIPPPVRILPSFQRF*TSWPVR Trigger: ACGCACGGGCCAGGAGGTTCAGAAGCGTTGGAACGA...AGGCAGAATTCTGACTGGGGGAGGTATAGGTTGGGTCCTTTGCCTCTCATTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR GCA 90 bp | AGCAATGAGAGGCAAAGGACCCAACCTATACCTCCCCCAGTCAGAATTCTGCCTGATCACTCCCCTCGCTaGCACTACAGCCCCATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SNERQRTQPIPPPVRILPDHSPR*HYSPIH Trigger: GTGGATGGGGCTGTAGTGGCAGCGAGGGGAGTGATC...AGGCAGAATTCTGACTGGGGGAGGTATAGGTTGGGTCCTTTGCCTCTCATTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR CCA 90 bp | GCTGAGCTCCGGAGGTCAGACACACCTCGCAGCAATGAGAGGCAAAGGACCCAATCTCGGATCAGGATCTaGTTCTCCTCGAAGGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: AELRRSDTPRSNERQRTQSRIRI*FSSKEK Trigger: CTTCTCCTTCGAGGAGAACCAGATCCTGATCCGAGA...TTGGGTCCTTTGCCTCTCATTGCTGCGAGGTGTGTCTGACCTCCGGAGCTCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR GCA 90 bp | CTCGGAGTCCTCTGCCTTCTATATTCTGATTTGTCTAGCAACTGCCAACCCTTCAGGAGAAGCGCGGCTTaGGGAGTCGGGTGGTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LGVLCLLYSDLSSNCQPFRRSAA*GVGWSP Trigger: AGGAGACCACCCGACTCCGCAAGCCGCGCTTCTCCT...GAAGGGTTGGCAGTTGCTAGACAAATCAGAATATAGAAGGCAGAGGACTCCGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR CCA 90 bp | AGAAGTTGGGGTTACAGGAGGCAGTCAGGCGGACACCACTGTACCAGAGAAAGGTGGACTCACGCTCCTTaGCTTCTTGGGGATTGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: RSWGYRRQSGGHHCTRERWTHAP*LLGDCK Trigger: CTTGCAATCCCCAAGAAGCCAAGGAGCGTGAGTCCA...CCTTTCTCTGGTACAGTGGTGTCCGCCTGACTGCCTCCTGTAACCCCAACTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR CCA 90 bp | TTCTGCCTCCTCCTCGGAGTCCTCTGCCTTCTATATTCTGATTTGTCTAGCAACCACAGACACAGGCTCTaGGGCGAGCTCCACCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: FCLLLGVLCLLYSDLSSNHRHRL*GELHLG Trigger: CCCAAGGTGGAGCTCGCCCCAGAGCCTGTGTCTGTG...GTTGCTAGACAAATCAGAATATAGAAGGCAGAGGACTCCGAGGAGGAGGCAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR GCA 90 bp | CTCGGAGTCCTCTGCCTTCTATATTCTGATTTGTCTAGCAACTGCCAACCCTTCGATCACTCCCCTCGCTaGCACTACAGCCCCATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LGVLCLLYSDLSSNCQPFDHSPR*HYSPIH Trigger: GTGGATGGGGCTGTAGTGGCAGCGAGGGGAGTGATC...GAAGGGTTGGCAGTTGCTAGACAAATCAGAATATAGAAGGCAGAGGACTCCGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR CCA 90 bp | CTCGGAGTCCTCTGCCTTCTATATTCTGATTTGTCTAGCAACTGCCAACCCTTCGAGCCTCCCTTGCTCTaGGCTGGTGTATCTGCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: LGVLCLLYSDLSSNCQPFEPPLL*AGVSAR Trigger: ACGGGCAGATACACCAGCCCAGAGCAAGGGAGGCTC...GAAGGGTTGGCAGTTGCTAGACAAATCAGAATATAGAAGGCAGAGGACTCCGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR CCA 90 bp | TCTGCCTTCTATATTCTGATTTGTCTAGCAACTGCCAACCCTTCCGAAGAAGTCCTTGGGGGCAGAGGGTaGCAGGACTGGTTTGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SAFYILICLATANPSEEVLGGRG*QDWFGR Trigger: CCTCCCAAACCAGTCCTGCCACCCTCTGCCCCCAAG...GACTTCTTCGGAAGGGTTGGCAGTTGCTAGACAAATCAGAATATAGAAGGCAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR CCA 90 bp | AGCAATGAGAGGCAAAGGACCCAACCTATACCTCCCCCAGTCAGAATTCTGCCTTCTCGGATCAGGATCTaGTTCTCCTCGAAGGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SNERQRTQPIPPPVRILPSRIRI*FSSKEK Trigger: CTTCTCCTTCGAGGAGAACCAGATCCTGATCCGAGA...AGGCAGAATTCTGACTGGGGGAGGTATAGGTTGGGTCCTTTGCCTCTCATTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR CCA 90 bp | TCTGCCTTCTATATTCTGATTTGTCTAGCAACTGCCAACCCTTCCGAAGAAGTCCGCTCCTTGGCTTCTTaGGGATTGCAAGAGGGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: SAFYILICLATANPSEEVRSLAS*GLQEGR Trigger: CCGGCCCTCTTGCAATCCCCAAGAAGCCAAGGAGCG...GACTTCTTCGGAAGGGTTGGCAGTTGCTAGACAAATCAGAATATAGAAGGCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS GCA 90 bp | TCCTCCTCCGCAGAGAAGGCGTCCTCAGCGGCGGGCCCCGCGCCCTaGGTGGAATGCGGCACGCGGGCCAGCTTCTCCTTGGTGCGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: SSSAEKASSAAGPAP*VECGTRASFSLVRR Trigger: GCGCCGCACCAAGGAGAAGCTGGCCCGCGTGCCGCATTCCACGCAGGGCGCGGGGCCCGCCGCTGAGGACGCCTTCTCTGCGGAGGAGGA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS GCA 90 bp | GCAGAGAAGGCGTCCTCAGCGGCGGGCCCCGCGCCCTGCGTGGAATaGGGCACGCGGGCCAGCTTCTCCTTGGTGCGGCGCTTGAAGTCG | + |
|
Preference number: 5 (lower is better) Translates to: AEKASSAAGPAPCVE*GTRASFSLVRRLKS Trigger: CGACTTCAAGCGCCGCACCAAGGAGAAGCTGGCCCGCGTGCCGCATTCCACGCAGGGCGCGGGGCCCGCCGCTGAGGACGCCTTCTCTGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR CAA 90 bp | CTCCTCGACTGCGCCTGCGCCAAGCAGGGAGAGGGGTTGCAGGCAGGAGCTTGGAAGGAGAAGCGCGGCTaGCGGAGTCGGGTGGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LLDCACAKQGEGLQAGAWKEKRG*RSRVVS Trigger: GGAGACCACCCGACTCCGCAAGCCGCGCTTCTCCTT...CCAAGCTCCTGCCTGCAACCCCTCTCCCTGCTTGGCGCAGGCGCAGTCGAGGAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS CCA 90 bp | GGCTGCATGGCTGCAGGGGACGTGGACTCACGCTCCTTGGCTTCTTaGGGATTGCAAGAGGGCCGGGCCCAGGACTCTGGGCTGCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: GCMAAGDVDSRSLAS*GLQEGRAQDSGLLE Trigger: CTCCAGCAGCCCAGAGTCCTGGGCCCGGCCCTCTTGCAATCCCCAAGAAGCCAAGGAGCGTGAGTCCACGTCCCCTGCAGCCATGCAGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR CAA 90 bp | GCTGAGCTCCGGAGGTCAGACACACCTCGCAGCAATGAGAGGCAAAGGACCCAAGGGGCGAGCTCCACCTaGGGGGCAGAGGGTGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: AELRRSDTPRSNERQRTQGASST*GAEGGR Trigger: CCTGCCACCCTCTGCCCCCAAGGTGGAGCTCGCCCC...TTGGGTCCTTTGCCTCTCATTGCTGCGAGGTGTGTCTGACCTCCGGAGCTCAGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS TCA 90 bp | GCGTGGAATGCGGCACGCGGGCCAGCTTCTCCTTGGTGCGGCGCTTaGAGTCGTTCCAACGCTTCTGAACCTCCTGGCCCGTGCGTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: AWNAARGPASPWCGA*SRSNASEPPGPCVS Trigger: GGAAACGCACGGGCCAGGAGGTTCAGAAGCGTTGGAACGACTTCAAGCGCCGCACCAAGGAGAAGCTGGCCCGCGTGCCGCATTCCACGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS TCA 90 bp | CGAAGGGTGCCAGCCAGCTCCCTGATAGCATTGGCAGTCTCCTGCTaGGCCCGCAGGAAGTCCAGGGACTGTTCTGGGGCTGAGGTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: RRVPASSLIALAVSC*ARRKSRDCSGAEVG Trigger: GCCCACCTCAGCCCCAGAACAGTCCCTGGACTTCCTGCGGGCTCAGCAGGAGACTGCCAATGCTATCAGGGAGCTGGCTGGCACCCTTCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS GCA 90 bp | TGGCTTCTTGGGGATTGCAAGAGGGCCGGGCCCAGGACTCTGGGCTaGTGGAGCCTCCCTTGCTCTGGGCTGGTGTATCTGCCCGTCGAT | + |
|
Preference number: 5 (lower is better) Translates to: WLLGDCKRAGPRTLG*WSLPCSGLVYLPVD Trigger: ATCGACGGGCAGATACACCAGCCCAGAGCAAGGGAGGCTCCAGCAGCCCAGAGTCCTGGGCCCGGCCCTCTTGCAATCCCCAAGAAGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS CCA 90 bp | CTTCTTGGGGATTGCAAGAGGGCCGGGCCCAGGACTCTGGGCTGCTaGAGCCTCCCTTGCTCTGGGCTGGTGTATCTGCCCGTCGATCCT | + |
|
Preference number: 5 (lower is better) Translates to: LLGDCKRAGPRTLGC*SLPCSGLVYLPVDP Trigger: AGGATCGACGGGCAGATACACCAGCCCAGAGCAAGGGAGGCTCCAGCAGCCCAGAGTCCTGGGCCCGGCCCTCTTGCAATCCCCAAGAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR CAA 90 bp | GGGGCTGAGCTCCGGAGGTCAGACACACCTCGCAGCAATGAGAGGCAAAGGACCCGGGCCAGCTTCTCCTaGGTGCGGCGCTTGAAGTCG | + |
|
Preference number: 5 (lower is better) Translates to: GAELRRSDTPRSNERQRTRASFS*VRRLKS Trigger: CGACTTCAAGCGCCGCACCAAGGAGAAGCTGGCCCG...GGTCCTTTGCCTCTCATTGCTGCGAGGTGTGTCTGACCTCCGGAGCTCAGCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR CAA 90 bp | GAAAGGAAGGGAGGGGCTGAGCTCCGGAGGTCAGACACACCTCGCAGCAATGAGGGTGGCAGGACTGGTTaGGGAGGTGGGGGCGGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: ERKGGAELRRSDTPRSNEGGRTG*GGGGGG Trigger: ACCTCCGCCCCCACCTCCCAAACCAGTCCTGCCACC...CTCATTGCTGCGAGGTGTGTCTGACCTCCGGAGCTCAGCCCCTCCCTTCCTTTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS GCA 90 bp | CGGTCCTCTGACAACACATACCGTTGTGTACTAGCGGTCGAAGCCTaGGGCTGTGAAGAGGCGGCTGCCCGGGACTCCTCAGCCCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: RSSDNTYRCVLAVEA*GCEEAAARDSSAPE Trigger: CTCTGGGGCTGAGGAGTCCCGGGCAGCCGCCTCTTCACAGCCGCAGGCTTCGACCGCTAGTACACAACGGTATGTGTTGTCAGAGGACCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS GCA 90 bp | AGGGGTAACAGGGCACTGAGGGCCTCGCTCAGTTTGGCCAGTCCCTaGCGAAGGGTGCCAGCCAGCTCCCTGATAGCATTGGCAGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RGNRALRASLSLASP*RRVPASSLIALAVS Trigger: GGAGACTGCCAATGCTATCAGGGAGCTGGCTGGCACCCTTCGGCAGGGACTGGCCAAACTGAGCGAGGCCCTCAGTGCCCTGTTACCCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR CAA 90 bp | GGAGTCCACCCGGGGACTCGCCCAGAGAATCAGGCACTAACTAGCACAGGAAGTAGGGCCTCGCTCAGTTaGGCCAGTCCCTGCCGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: GVHPGTRPENQALTSTGSRASLS*ASPCRR Trigger: CCTTCGGCAGGGACTGGCCAAACTGAGCGAGGCCCT...ACTTCCTGTGCTAGTTAGTGCCTGATTCTCTGGGCGAGTCCCCGGGTGGACTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR CAA 90 bp | GCTGAGCTCCGGAGGTCAGACACACCTCGCAGCAATGAGAGGCAAAGGACCCAAGCTGGGGGTAGTGGTTaGGGCACCCCTTCCTCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: AELRRSDTPRSNERQRTQAGGSG*GTPSSL Trigger: GAGCGAGGAAGGGGTGCCCAAACCACTACCCCCAGC...TTGGGTCCTTTGCCTCTCATTGCTGCGAGGTGTGTCTGACCTCCGGAGCTCAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR CAA 90 bp | GAGAATCAGGCACTAACTAGCACAGGAAGTGGGGTGCTCACGCCCCTAGAGCAGAAGGAGAAGCGCGGCTaGCGGAGTCGGGTGGTCTCC | + |
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Preference number: 5 (lower is better) Translates to: ENQALTSTGSGVLTPLEQKEKRG*RSRVVS Trigger: GGAGACCACCCGACTCCGCAAGCCGCGCTTCTCCTT...CTGCTCTAGGGGCGTGAGCACCCCACTTCCTGTGCTAGTTAGTGCCTGATTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR CAA 90 bp | GGAGTCCACCCGGGGACTCGCCCAGAGAATCAGGCACTAACTAGCACAGGAAGTTTGGCTTCTTGGGGATaGCAAGAGGGCCGGGCCCAG | + |
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Preference number: 5 (lower is better) Translates to: GVHPGTRPENQALTSTGSLASWG*QEGRAQ Trigger: CTGGGCCCGGCCCTCTTGCAATCCCCAAGAAGCCAA...ACTTCCTGTGCTAGTTAGTGCCTGATTCTCTGGGCGAGTCCCCGGGTGGACTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR CAA 90 bp | AAGTTGGGGTTACAGGAGGCAGTCAGGCGGACACCACTGTACCAGAGAAAGGGGAGGGCCTCGCTCAGTTaGGCCAGTCCCTGCCGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: KLGLQEAVRRTPLYQRKGRASLS*ASPCRR Trigger: CCTTCGGCAGGGACTGGCCAAACTGAGCGAGGCCCT...CCCCTTTCTCTGGTACAGTGGTGTCCGCCTGACTGCCTCCTGTAACCCCAACTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR CAA 90 bp | GGGGCTGAGCTCCGGAGGTCAGACACACCTCGCAGCAATGAGAGGCAAAGGACCCAGCTGGTGATGCCGTaGATTTTGGTGGCGATGCTG | + |
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Preference number: 5 (lower is better) Translates to: GAELRRSDTPRSNERQRTQLVMP*ILVAML Trigger: CAGCATCGCCACCAAAATCAACGGCATCACCAGCTG...GGTCCTTTGCCTCTCATTGCTGCGAGGTGTGTCTGACCTCCGGAGCTCAGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR CAA 90 bp | ATGAGAGGCAAAGGACCCAACCTATACCTCCCCCAGTCAGAATTCTGCCTCCTCGGTGGCAGGACTGGTTaGGGAGGTGGGGGCGGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: MRGKGPNLYLPQSEFCLLGGRTG*GGGGGG Trigger: ACCTCCGCCCCCACCTCCCAAACCAGTCCTGCCACC...GAGGAGGCAGAATTCTGACTGGGGGAGGTATAGGTTGGGTCCTTTGCCTCTCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR CAA 90 bp | AGAAGTTGGGGTTACAGGAGGCAGTCAGGCGGACACCACTGTACCAGAGAAAGGGCTGGGGGTAGTGGTTaGGGCACCCCTTCCTCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RSWGYRRQSGGHHCTRERAGGSG*GTPSSL Trigger: GAGCGAGGAAGGGGTGCCCAAACCACTACCCCCAGC...CCTTTCTCTGGTACAGTGGTGTCCGCCTGACTGCCTCCTGTAACCCCAACTTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS TCA 90 bp | GCCAGCTTCTCCTTGGTGCGGCGCTTGAAGTCGTTCCAACGCTTCTaGACCTCCTGGCCCGTGCGTTTCCAGCTGGTGATGCCGTTGATT | + |
|
Preference number: 5 (lower is better) Translates to: ASFSLVRRLKSFQRF*TSWPVRFQLVMPLI Trigger: AATCAACGGCATCACCAGCTGGAAACGCACGGGCCAGGAGGTTCAGAAGCGTTGGAACGACTTCAAGCGCCGCACCAAGGAGAAGCTGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR CAA 90 bp | TTCTGCCTCCTCCTCGGAGTCCTCTGCCTTCTATATTCTGATTTGTCTAGCAACGGGGCGAGCTCCACCTaGGGGGCAGAGGGTGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: FCLLLGVLCLLYSDLSSNGASST*GAEGGR Trigger: CCTGCCACCCTCTGCCCCCAAGGTGGAGCTCGCCCC...GTTGCTAGACAAATCAGAATATAGAAGGCAGAGGACTCCGAGGAGGAGGCAGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR CAA 90 bp | AGCAATGAGAGGCAAAGGACCCAACCTATACCTCCCCCAGTCAGAATTCTGCCTTTGGCTTCTTGGGGATaGCAAGAGGGCCGGGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SNERQRTQPIPPPVRILPLASWG*QEGRAQ Trigger: CTGGGCCCGGCCCTCTTGCAATCCCCAAGAAGCCAA...AGGCAGAATTCTGACTGGGGGAGGTATAGGTTGGGTCCTTTGCCTCTCATTGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR CAA 90 bp | GCTGAGCTCCGGAGGTCAGACACACCTCGCAGCAATGAGAGGCAAAGGACCCAAAAACCTTTCCTCCTTTaGTGTGGGGGTGAGTCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: AELRRSDTPRSNERQRTQKPFLL*CGGESW Trigger: CCACGACTCACCCCCACACAAAAGGAGGAAAGGTTT...TTGGGTCCTTTGCCTCTCATTGCTGCGAGGTGTGTCTGACCTCCGGAGCTCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR CAA 90 bp | CTCGGAGTCCTCTGCCTTCTATATTCTGATTTGTCTAGCAACTGCCAACCCTTCCGGGCCAGCTTCTCCTaGGTGCGGCGCTTGAAGTCG | + |
|
Preference number: 5 (lower is better) Translates to: LGVLCLLYSDLSSNCQPFRASFS*VRRLKS Trigger: CGACTTCAAGCGCCGCACCAAGGAGAAGCTGGCCCG...GAAGGGTTGGCAGTTGCTAGACAAATCAGAATATAGAAGGCAGAGGACTCCGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR CAA 90 bp | ATGAGAGGCAAAGGACCCAACCTATACCTCCCCCAGTCAGAATTCTGCCTCCTCCAGCTGGTGATGCCGTaGATTTTGGTGGCGATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: MRGKGPNLYLPQSEFCLLQLVMP*ILVAML Trigger: CAGCATCGCCACCAAAATCAACGGCATCACCAGCTG...GAGGAGGCAGAATTCTGACTGGGGGAGGTATAGGTTGGGTCCTTTGCCTCTCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR CAA 90 bp | TCTGCCTTCTATATTCTGATTTGTCTAGCAACTGCCAACCCTTCCGAAGAAGTCTCCTTGGTGCGGCGCTaGAAGTCGTTCCAACGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SAFYILICLATANPSEEVSLVRR*KSFQRF Trigger: GAAGCGTTGGAACGACTTCAAGCGCCGCACCAAGGA...GACTTCTTCGGAAGGGTTGGCAGTTGCTAGACAAATCAGAATATAGAAGGCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS-3UTR CAA 90 bp | CTCGGAGTCCTCTGCCTTCTATATTCTGATTTGTCTAGCAACTGCCAACCCTTCAAACCTTTCCTCCTTTaGTGTGGGGGTGAGTCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LGVLCLLYSDLSSNCQPFKPFLL*CGGESW Trigger: CCACGACTCACCCCCACACAAAAGGAGGAAAGGTTT...GAAGGGTTGGCAGTTGCTAGACAAATCAGAATATAGAAGGCAGAGGACTCCGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS GCA 72 bp | GCGTCCTCAGCGGCGGGCCCCGCGCCCTGCGTGGAATaGGGCACGCGGGCCAGCTTCTCCTTGGTGCGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: ASSAAGPAPCVE*GTRASFSLVRR Trigger: GCGCCGCACCAAGGAGAAGCTGGCCCGCGTGCCGCATTCCACGCAGGGCGCGGGGCCCGCCGCTGAGGACGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS GCA 72 bp | GCAGAGAAGGCGTCCTCAGCGGCGGGCCCCGCGCCCTaGGTGGAATGCGGCACGCGGGCCAGCTTCTCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: AEKASSAAGPAP*VECGTRASFSL Trigger: CAAGGAGAAGCTGGCCCGCGTGCCGCATTCCACGCAGGGCGCGGGGCCCGCCGCTGAGGACGCCTTCTCTGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS CCA 72 bp | AGAAGGCGTCCTCAGCGGCGGGCCCCGCGCCCTGCGTaGAATGCGGCACGCGGGCCAGCTTCTCCTTGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: RRRPQRRAPRPA*NAARGPASPWC Trigger: GCACCAAGGAGAAGCTGGCCCGCGTGCCGCATTCCACGCAGGGCGCGGGGCCCGCCGCTGAGGACGCCTTCT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS CCA 72 bp | CGAGGAGGAGTTGGGCTAGGAGATGAGGGTGCCACTTaGGCCAGCGCCGTGGGTGGTGGTGGAGGGGCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: RGGVGLGDEGAT*ASAVGGGGGAG Trigger: CCCTGCCCCTCCACCACCACCCACGGCGCTGGCCCAAGTGGCACCCTCATCTCCTAGCCCAACTCCTCCTCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS TCA 72 bp | GCGGCACGCGGGCCAGCTTCTCCTTGGTGCGGCGCTTaGAGTCGTTCCAACGCTTCTGAACCTCCTGGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: AARGPASPWCGA*SRSNASEPPGP Trigger: CGGGCCAGGAGGTTCAGAAGCGTTGGAACGACTTCAAGCGCCGCACCAAGGAGAAGCTGGCCCGCGTGCCGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS GCA 72 bp | TCAGGATCTGGTTCTCCTCGAAGGAGAAGCGCGGCTTaGGGAGTCGGGTGGTCTCCTCCGCTTCGCCCGGCG | + |
|
Preference number: 6 (lower is better) Translates to: SGSGSPRRRSAA*GVGWSPPLRPA Trigger: CGCCGGGCGAAGCGGAGGAGACCACCCGACTCCGCAAGCCGCGCTTCTCCTTCGAGGAGAACCAGATCCTGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS GCA 72 bp | GGGGATTGCAAGAGGGCCGGGCCCAGGACTCTGGGCTaGTGGAGCCTCCCTTGCTCTGGGCTGGTGTATCTG | + |
|
Preference number: 6 (lower is better) Translates to: GDCKRAGPRTLG*WSLPCSGLVYL Trigger: CAGATACACCAGCCCAGAGCAAGGGAGGCTCCAGCAGCCCAGAGTCCTGGGCCCGGCCCTCTTGCAATCCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS GCA 72 bp | GGGACGTGGACTCACGCTCCTTGGCTTCTTGGGGATTaGAAGAGGGCCGGGCCCAGGACTCTGGGCTGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: GTWTHAPWLLGD*KRAGPRTLGCW Trigger: CCAGCAGCCCAGAGTCCTGGGCCCGGCCCTCTTGCAATCCCCAAGAAGCCAAGGAGCGTGAGTCCACGTCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS CCA 72 bp | GATTGCAAGAGGGCCGGGCCCAGGACTCTGGGCTGCTaGAGCCTCCCTTGCTCTGGGCTGGTGTATCTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: DCKRAGPRTLGC*SLPCSGLVYLP Trigger: GGGCAGATACACCAGCCCAGAGCAAGGGAGGCTCCAGCAGCCCAGAGTCCTGGGCCCGGCCCTCTTGCAATC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS CCA 72 bp | GCTGCATGGCTGCAGGGGACGTGGACTCACGCTCCTTaGCTTCTTGGGGATTGCAAGAGGGCCGGGCCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: AAWLQGTWTHAP*LLGDCKRAGPR Trigger: CCTGGGCCCGGCCCTCTTGCAATCCCCAAGAAGCCAAGGAGCGTGAGTCCACGTCCCCTGCAGCCATGCAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS CAA 72 bp | GGCTGCAGGGGACGTGGACTCACGCTCCTTGGCTTCTaGGGGATTGCAAGAGGGCCGGGCCCAGGACTCTGG | + |
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Preference number: 6 (lower is better) Translates to: GCRGRGLTLLGF*GIARGPGPGLW Trigger: CCAGAGTCCTGGGCCCGGCCCTCTTGCAATCCCCAAGAAGCCAAGGAGCGTGAGTCCACGTCCCCTGCAGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS CAA 72 bp | GGCTGCATGGCTGCAGGGGACGTGGACTCACGCTCCTaGGCTTCTTGGGGATTGCAAGAGGGCCGGGCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: GCMAAGDVDSRS*ASWGLQEGRAQ Trigger: CTGGGCCCGGCCCTCTTGCAATCCCCAAGAAGCCAAGGAGCGTGAGTCCACGTCCCCTGCAGCCATGCAGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS CAA 90 bp | AGGCTGCATGGCTGCAGGGGACGTGGACTCACGCTCCTTGGCTTCTaGGGGATTGCAAGAGGGCCGGGCCCAGGACTCTGGGCTGCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: RLHGCRGRGLTLLGF*GIARGPGPGLWAAG Trigger: TCCAGCAGCCCAGAGTCCTGGGCCCGGCCCTCTTGCAATCCCCAAGAAGCCAAGGAGCGTGAGTCCACGTCCCCTGCAGCCATGCAGCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS CAA 90 bp | AGCTGGACAGGCTGCATGGCTGCAGGGGACGTGGACTCACGCTCCTaGGCTTCTTGGGGATTGCAAGAGGGCCGGGCCCAGGACTCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: SWTGCMAAGDVDSRS*ASWGLQEGRAQDSG Trigger: CCCAGAGTCCTGGGCCCGGCCCTCTTGCAATCCCCAAGAAGCCAAGGAGCGTGAGTCCACGTCCCCTGCAGCCATGCAGCCTGTCCAGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS CCA 72 bp | CTACCACAGACACAGGCTCTGGGGCGAGCTCCACCTTaGGGGCAGAGGGTGGCAGGACTGGTTTGGGAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LPQTQALGRAPP*GQRVAGLVWEV Trigger: CACCTCCCAAACCAGTCCTGCCACCCTCTGCCCCCAAGGTGGAGCTCGCCCCAGAGCCTGTGTCTGTGGTAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS CAA 72 bp | ATCAGGATCTGGTTCTCCTCGAAGGAGAAGCGCGGCTaGCGGAGTCGGGTGGTCTCCTCCGCTTCGCCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: IRIWFSSKEKRG*RSRVVSSASPG Trigger: GCCGGGCGAAGCGGAGGAGACCACCCGACTCCGCAAGCCGCGCTTCTCCTTCGAGGAGAACCAGATCCTGAT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS TCA 72 bp | ATACCGTTGTGTACTAGCGGTCGAAGCCTGCGGCTGTaGAGAGGCGGCTGCCCGGGACTCCTCAGCCCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: IPLCTSGRSLRL*RGGCPGLLSPR Trigger: TCTGGGGCTGAGGAGTCCCGGGCAGCCGCCTCTTCACAGCCGCAGGCTTCGACCGCTAGTACACAACGGTAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS GCA 72 bp | AGGGCACTGAGGGCCTCGCTCAGTTTGGCCAGTCCCTaGCGAAGGGTGCCAGCCAGCTCCCTGATAGCATTG | + |
|
Preference number: 6 (lower is better) Translates to: RALRASLSLASP*RRVPASSLIAL Trigger: CAATGCTATCAGGGAGCTGGCTGGCACCCTTCGGCAGGGACTGGCCAAACTGAGCGAGGCCCTCAGTGCCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS CAA 72 bp | TGGCCCGTGCGTTTCCAGCTGGTGATGCCGTTGATTTaGGTGGCGATGCTGTCCCACACTCGCCGCCGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: WPVRFQLVMPLI*VAMLSHTRRRS Trigger: CGAGCGGCGGCGAGTGTGGGACAGCATCGCCACCAAAATCAACGGCATCACCAGCTGGAAACGCACGGGCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS CAA 90 bp | GTTCCCGGCAAAAGGGGTAACAGGGCACTGAGGGCCTCGCTCAGTTaGGCCAGTCCCTGCCGAAGGGTGCCAGCCAGCTCCCTGATAGCA | + |
|
Preference number: 6 (lower is better) Translates to: VPGKRGNRALRASLS*ASPCRRVPASSLIA Trigger: TGCTATCAGGGAGCTGGCTGGCACCCTTCGGCAGGGACTGGCCAAACTGAGCGAGGCCCTCAGTGCCCTGTTACCCCTTTTGCCGGGAAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS CAA 72 bp | ACCTCCTGGCCCGTGCGTTTCCAGCTGGTGATGCCGTaGATTTTGGTGGCGATGCTGTCCCACACTCGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: TSWPVRFQLVMP*ILVAMLSHTRR Trigger: GCGGCGAGTGTGGGACAGCATCGCCACCAAAATCAACGGCATCACCAGCTGGAAACGCACGGGCCAGGAGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS GCA 72 bp | GACAACACATACCGTTGTGTACTAGCGGTCGAAGCCTaGGGCTGTGAAGAGGCGGCTGCCCGGGACTCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: DNTYRCVLAVEA*GCEEAAARDSS Trigger: TGAGGAGTCCCGGGCAGCCGCCTCTTCACAGCCGCAGGCTTCGACCGCTAGTACACAACGGTATGTGTTGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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| CDS TCA 72 bp | TCCTTGGTGCGGCGCTTGAAGTCGTTCCAACGCTTCTaGACCTCCTGGCCCGTGCGTTTCCAGCTGGTGATG | + |
|
Preference number: 6 (lower is better) Translates to: SLVRRLKSFQRF*TSWPVRFQLVM Trigger: CATCACCAGCTGGAAACGCACGGGCCAGGAGGTTCAGAAGCGTTGGAACGACTTCAAGCGCCGCACCAAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059331.9 ENSMUST00000131087.2 |
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