Pregenerated sensors for MYPN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020067Ensembl transcript IDs: ENSMUST00000095580.3, ENSMUST00000218978.2
Found 308 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGCAAAGGGATTGACAACAGACGCCTCCAGTTCATAGCCCTGGCTTaGCTGCAGCAAGCCGCTGTGACAACCATCCCCGGGGCCATGTTT | + |
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Preference number: 1 (lower is better) Translates to: SKGIDNRRLQFIALA*LQQAAVTTIPGAMF Trigger: AAACATGGCCCCGGGGATGGTTGTCACAGCGGCTTGCTGCAGGCAAGCCAGGGCTATGAACTGGAGGCGTCTGTTGTCAATCCCTTTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| 3UTR CCA 90 bp | TCCCCCACCAAAAGCTGTGGTGGTGGTGGTGCGGTGTCTTTGGTTTaGGTATATTGTCTACTGGCTGGCATCTTGAAGACGCACAGCCCT | + |
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Preference number: 1 (lower is better) Translates to: SPTKSCGGGGAVSLV*VYCLLAGILKTHSP Trigger: AGGGCTGTGCGTCTTCAAGATGCCAGCCAGTAGACAATATACCCAAACCAAAGACACCGCACCACCACCACCACAGCTTTTGGTGGGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095580.3 ENSMUST00000218978.2 |
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| 3UTR-3UTR CCA 90 bp | TTGCCTGCAGCAAGCCGCTGTGACAACCATCCCCGGGGCCATGTTTGGACAGGCATATTGTCTACTGGCTaGCATCTTGAAGACGCACAG | + |
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Preference number: 2 (lower is better) Translates to: LPAASRCDNHPRGHVWTGILSTG*HLEDAQ Trigger: CTGTGCGTCTTCAAGATGCCAGCCAGTAGACAATAT...GCCTGTCCAAACATGGCCCCGGGGATGGTTGTCACAGCGGCTTGCTGCAGGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| 3UTR CAA 90 bp | CTTCTTGCCACGGGTCCCGCAGGATGGAAACTCACTCCAATCCAGTaGTTTGGAAACCACTGCATACGGTCAGTCGTCTTCCTACCCCTC | + |
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Preference number: 2 (lower is better) Translates to: LLATGPAGWKLTPIQ*FGNHCIRSVVFLPL Trigger: GAGGGGTAGGAAGACGACTGACCGTATGCAGTGGTTTCCAAACAACTGGATTGGAGTGAGTTTCCATCCTGCGGGACCCGTGGCAAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095580.3 ENSMUST00000218978.2 |
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| 3UTR CAA 90 bp | GGTGCGGTGTCTTTGGTTTGGGTATATTGTCTACTGGCTGGCATCTaGAAGACGCACAGCCCTCAGCCAAGGCTCAAAAAGCCCCAGCCA | + |
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Preference number: 2 (lower is better) Translates to: GAVSLVWVYCLLAGI*KTHSPQPRLKKPQP Trigger: TGGCTGGGGCTTTTTGAGCCTTGGCTGAGGGCTGTGCGTCTTCAAGATGCCAGCCAGTAGACAATATACCCAAACCAAAGACACCGCACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095580.3 ENSMUST00000218978.2 |
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| 3UTR CAA 90 bp | CAAAAGCTGTGGTGGTGGTGGTGCGGTGTCTTTGGTTTGGGTATATaGTCTACTGGCTGGCATCTTGAAGACGCACAGCCCTCAGCCAAG | + |
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Preference number: 2 (lower is better) Translates to: QKLWWWWCGVFGLGI*STGWHLEDAQPSAK Trigger: CTTGGCTGAGGGCTGTGCGTCTTCAAGATGCCAGCCAGTAGACAATATACCCAAACCAAAGACACCGCACCACCACCACCACAGCTTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095580.3 ENSMUST00000218978.2 |
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| 3UTR-3UTR CCA 90 bp | ATATTGTCTACTGGCTGGCATCTTGAAGACGCACAGCCCTCAGCCAAGGCTCAATCCAATCCAGTTGTTTaGAAACCACTGCATACGGTC | + |
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Preference number: 2 (lower is better) Translates to: ILSTGWHLEDAQPSAKAQSNPVV*KPLHTV Trigger: GACCGTATGCAGTGGTTTCCAAACAACTGGATTGGA...TTGAGCCTTGGCTGAGGGCTGTGCGTCTTCAAGATGCCAGCCAGTAGACAATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095580.3 ENSMUST00000218978.2 |
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| 3UTR-3UTR CCA 90 bp | TTGAAGACGCACAGCCCTCAGCCAAGGCTCAAAAAGCCCCAGCCAACTTACTTATCCAATCCAGTTGTTTaGAAACCACTGCATACGGTC | + |
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Preference number: 2 (lower is better) Translates to: LKTHSPQPRLKKPQPTYLSNPVV*KPLHTV Trigger: GACCGTATGCAGTGGTTTCCAAACAACTGGATTGGA...TAAGTAAGTTGGCTGGGGCTTTTTGAGCCTTGGCTGAGGGCTGTGCGTCTTCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095580.3 ENSMUST00000218978.2 |
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| 3UTR-3UTR CCA 90 bp | GGCTCATTTAATGAATTCACCAGGATGACGGGGATGGATGTAACCCACGAAAGGGTGGTGCGGTGTCTTTaGTTTGGGTATATTGTCTAC | + |
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Preference number: 2 (lower is better) Translates to: GSFNEFTRMTGMDVTHERVVRCL*FGYIVY Trigger: GTAGACAATATACCCAAACCAAAGACACCGCACCAC...CCTTTCGTGGGTTACATCCATCCCCGTCATCCTGGTGAATTCATTAAATGAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095580.3 ENSMUST00000218978.2 |
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| 3UTR GCA 72 bp | CTCCCTATCCCCCACCAAAAGCTGTGGTGGTGGTGGTaGGGTGTCTTTGGTTTGGGTATATTGTCTACTGGC | + |
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Preference number: 3 (lower is better) Translates to: LPIPHQKLWWWW*GVFGLGILSTG Trigger: GCCAGTAGACAATATACCCAAACCAAAGACACCGCACCACCACCACCACAGCTTTTGGTGGGGGATAGGGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095580.3 ENSMUST00000218978.2 |
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| 3UTR-3UTR CAA 90 bp | GCTCCCTATCCCCCACCAAAAGCTGTGGTGGTGGTGGTGCGGTGTCTTTGGTTTCTCCAATCCAGTTGTTaGGAAACCACTGCATACGGT | + |
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Preference number: 3 (lower is better) Translates to: APYPPPKAVVVVVRCLWFLQSSC*ETTAYG Trigger: ACCGTATGCAGTGGTTTCCAAACAACTGGATTGGAG...AAACCAAAGACACCGCACCACCACCACCACAGCTTTTGGTGGGGGATAGGGAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095580.3 ENSMUST00000218978.2 |
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| 3UTR CCA 72 bp | TGCGGTGTCTTTGGTTTGGGTATATTGTCTACTGGCTaGCATCTTGAAGACGCACAGCCCTCAGCCAAGGCT | + |
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Preference number: 3 (lower is better) Translates to: CGVFGLGILSTG*HLEDAQPSAKA Trigger: AGCCTTGGCTGAGGGCTGTGCGTCTTCAAGATGCCAGCCAGTAGACAATATACCCAAACCAAAGACACCGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095580.3 ENSMUST00000218978.2 |
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| 3UTR-3UTR CAA 90 bp | TGTGGTGGTGGTGGTGCGGTGTCTTTGGTTTGGGTATATTGTCTACTGGCTGGCTACTTAAAACACTTCTaGCCACGGGTCCCGCAGGAT | + |
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Preference number: 3 (lower is better) Translates to: CGGGGAVSLVWVYCLLAGYLKHF*PRVPQD Trigger: ATCCTGCGGGACCCGTGGCAAGAAGTGTTTTAAGTA...GCCAGCCAGTAGACAATATACCCAAACCAAAGACACCGCACCACCACCACCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095580.3 ENSMUST00000218978.2 |
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| 3UTR TCA 72 bp | CTTTGGTTTGGGTATATTGTCTACTGGCTGGCATCTTaGAGACGCACAGCCCTCAGCCAAGGCTCAAAAAGC | + |
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Preference number: 3 (lower is better) Translates to: LWFGYIVYWLAS*RRTALSQGSKS Trigger: GCTTTTTGAGCCTTGGCTGAGGGCTGTGCGTCTTCAAGATGCCAGCCAGTAGACAATATACCCAAACCAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095580.3 ENSMUST00000218978.2 |
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| 3UTR CCA 72 bp | AAAAGCTGTGGTGGTGGTGGTGCGGTGTCTTTGGTTTaGGTATATTGTCTACTGGCTGGCATCTTGAAGACG | + |
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Preference number: 3 (lower is better) Translates to: KSCGGGGAVSLV*VYCLLAGILKT Trigger: CGTCTTCAAGATGCCAGCCAGTAGACAATATACCCAAACCAAAGACACCGCACCACCACCACCACAGCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095580.3 ENSMUST00000218978.2 |
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| 3UTR TCA 72 bp | CTTTCTAAGCAATTACTATCTCCAGCTAAAACCACTTaGGAAGGATGCCAGTTGAGGGGGACCTGGCACAGA | + |
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Preference number: 3 (lower is better) Translates to: LSKQLLSPAKTT*EGCQLRGTWHR Trigger: TCTGTGCCAGGTCCCCCTCAACTGGCATCCTTCTCAAGTGGTTTTAGCTGGAGATAGTAATTGCTTAGAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| 3UTR CCA 72 bp | TTACTTAAAACACTTCTTGCCACGGGTCCCGCAGGATaGAAACTCACTCCAATCCAGTTGTTTGGAAACCAC | + |
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Preference number: 3 (lower is better) Translates to: LLKTLLATGPAG*KLTPIQLFGNH Trigger: GTGGTTTCCAAACAACTGGATTGGAGTGAGTTTCCATCCTGCGGGACCCGTGGCAAGAAGTGTTTTAAGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095580.3 ENSMUST00000218978.2 |
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| 3UTR-3UTR CAA 90 bp | TTTCACGCCTTTCTAAGCAATTACTATCTCCAGCTAAAACCACTTGAGAAGGATTGCAAAGTAAGTGTTTaGCCACTGGGGGTGGGGTGG | + |
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Preference number: 3 (lower is better) Translates to: FHAFLSNYYLQLKPLEKDCKVSV*PLGVGW Trigger: CCACCCCACCCCCAGTGGCAAAACACTTACTTTGCA...ATCCTTCTCAAGTGGTTTTAGCTGGAGATAGTAATTGCTTAGAAAGGCGTGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS-3UTR GCA 90 bp | TTGCCTGCAGCAAGCCGCTGTGACAACCATCCCCGGGGCCATGTTTGGACAGGCGGCTGTTGGTGGCGCTaGTGGCTCTGCTGGGCTTGG | + |
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Preference number: 4 (lower is better) Translates to: LPAASRCDNHPRGHVWTGGCWWR*WLCWAW Trigger: CCAAGCCCAGCAGAGCCAGCAGCGCCACCAACAGCC...GCCTGTCCAAACATGGCCCCGGGGATGGTTGTCACAGCGGCTTGCTGCAGGCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS-3UTR CCA 90 bp | CTAGCATCCCTAACACACCGGGTGGGGGAGCATGCTAGCTCCCTATCCCCCACCGTCCCTGCGTCTCGTTaGGTGAGCGGGTCGATGAGC | + |
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Preference number: 4 (lower is better) Translates to: LASLTHRVGEHASSLSPTVPASR*VSGSMS Trigger: GCTCATCGACCCGCTCACCCAACGAGACGCAGGGAC...GGTGGGGGATAGGGAGCTAGCATGCTCCCCCACCCGGTGTGTTAGGGATGCTAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000095580.3 ENSMUST00000218978.2 |
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| CDS-3UTR TCA 90 bp | TGGGTATATTGTCTACTGGCTGGCATCTTGAAGACGCACAGCCCTCAGCCAAGGGCGGGGGCATGCCTATaGCCCGGCCCTCCAGTCGCA | + |
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Preference number: 4 (lower is better) Translates to: WVYCLLAGILKTHSPQPRAGACL*PGPPVA Trigger: TGCGACTGGAGGGCCGGGTCATAGGCATGCCCCCGC...CCTTGGCTGAGGGCTGTGCGTCTTCAAGATGCCAGCCAGTAGACAATATACCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095580.3 ENSMUST00000218978.2 |
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| CDS-3UTR TCA 90 bp | AAAGCCCCAGCCAACTTACTTAAAACACTTCTTGCCACGGGTCCCGCAGGATGGGCGGGGGCATGCCTATaGCCCGGCCCTCCAGTCGCA | + |
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Preference number: 4 (lower is better) Translates to: KAPANLLKTLLATGPAGWAGACL*PGPPVA Trigger: TGCGACTGGAGGGCCGGGTCATAGGCATGCCCCCGC...CCATCCTGCGGGACCCGTGGCAAGAAGTGTTTTAAGTAAGTTGGCTGGGGCTTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000095580.3 ENSMUST00000218978.2 |
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| CDS-3UTR CCA 90 bp | TTGCCTGCAGCAAGCCGCTGTGACAACCATCCCCGGGGCCATGTTTGGACAGGCGCCCAATCCTGGAGCTaGACCGGGGCTCATTATGGT | + |
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Preference number: 4 (lower is better) Translates to: LPAASRCDNHPRGHVWTGAQSWS*TGAHYG Trigger: ACCATAATGAGCCCCGGTCCAGCTCCAGGATTGGGC...GCCTGTCCAAACATGGCCCCGGGGATGGTTGTCACAGCGGCTTGCTGCAGGCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS-3UTR CCA 90 bp | GCTCCCTATCCCCCACCAAAAGCTGTGGTGGTGGTGGTGCGGTGTCTTTGGTTTTGGGCCGCCAAAGGCTaGGCTTCTGCTGCTGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: APYPPPKAVVVVVRCLWFWAAKG*ASAAGG Trigger: TCCTCCAGCAGCAGAAGCCCAGCCTTTGGCGGCCCA...AAACCAAAGACACCGCACCACCACCACCACAGCTTTTGGTGGGGGATAGGGAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS-3UTR CCA 90 bp | GCTCCCTATCCCCCACCAAAAGCTGTGGTGGTGGTGGTGCGGTGTCTTTGGTTTTTGAGTGGGGAAGGCTaGTGCTCAGCCACAGCCGGG | + |
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Preference number: 4 (lower is better) Translates to: APYPPPKAVVVVVRCLWFLSGEG*CSATAG Trigger: CCCGGCTGTGGCTGAGCACCAGCCTTCCCCACTCAA...AAACCAAAGACACCGCACCACCACCACCACAGCTTTTGGTGGGGGATAGGGAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS-3UTR CCA 90 bp | GCTCCCTATCCCCCACCAAAAGCTGTGGTGGTGGTGGTGCGGTGTCTTTGGTTTGTCCCTGCGTCTCGTTaGGTGAGCGGGTCGATGAGC | + |
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Preference number: 4 (lower is better) Translates to: APYPPPKAVVVVVRCLWFVPASR*VSGSMS Trigger: GCTCATCGACCCGCTCACCCAACGAGACGCAGGGAC...AAACCAAAGACACCGCACCACCACCACCACAGCTTTTGGTGGGGGATAGGGAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095580.3 ENSMUST00000218978.2 |
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| CDS-3UTR TCA 90 bp | GCTCCCTATCCCCCACCAAAAGCTGTGGTGGTGGTGGTGCGGTGTCTTTGGTTTGGACTCCCGTCTCTCTaGCCAGCATCTTGTGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: APYPPPKAVVVVVRCLWFGLPSL*PASCGR Trigger: CCTCCCACAAGATGCTGGTCAGAGAGACGGGAGTCC...AAACCAAAGACACCGCACCACCACCACCACAGCTTTTGGTGGGGGATAGGGAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS-3UTR GCA 90 bp | TTTGGAAACCACTGCATACGGTCAGTCGTCTTCCTACCCCTCCACAGTCCACCCGAAGCGGGGAAGAAGTaGTTCGGCCGGGCCAGGTTG | + |
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Preference number: 4 (lower is better) Translates to: FGNHCIRSVVFLPLHSPPEAGKK*FGRARL Trigger: CAACCTGGCCCGGCCGAAGCACTTCTTCCCCGCTTC...GGGTGGACTGTGGAGGGGTAGGAAGACGACTGACCGTATGCAGTGGTTTCCAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS-3UTR CCA 90 bp | CCCCCACCAAAAGCTGTGGTGGTGGTGGTGCGGTGTCTTTGGTTTGGGTATATTGTCCGGAAGGTCCTCTaGGCCTCCTCCCTCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: PPPKAVVVVVRCLWFGYIVRKVL*ASSLCS Trigger: GCTGCAGAGGGAGGAGGCCCAGAGGACCTTCCGGAC...AATATACCCAAACCAAAGACACCGCACCACCACCACCACAGCTTTTGGTGGGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS-3UTR CCA 90 bp | TGGGTATATTGTCTACTGGCTGGCATCTTGAAGACGCACAGCCCTCAGCCAAGGGTGGACACTCTGGGCTaGGCCGCCAAAGGCTGGGCT | + |
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Preference number: 4 (lower is better) Translates to: WVYCLLAGILKTHSPQPRVDTLG*AAKGWA Trigger: AGCCCAGCCTTTGGCGGCCCAGCCCAGAGTGTCCAC...CCTTGGCTGAGGGCTGTGCGTCTTCAAGATGCCAGCCAGTAGACAATATACCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS-3UTR CCA 90 bp | CAAGCCGCTGTGACAACCATCCCCGGGGCCATGTTTGGACAGGCTAAGAACGGTAGTCAAGTTTGGGTTTaGCCAGGACCGGAGGGGGCT | + |
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Preference number: 4 (lower is better) Translates to: QAAVTTIPGAMFGQAKNGSQVWV*PGPEGA Trigger: AGCCCCCTCCGGTCCTGGCCAAACCCAAACTTGACT...ACCGTTCTTAGCCTGTCCAAACATGGCCCCGGGGATGGTTGTCACAGCGGCTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS-3UTR CCA 90 bp | GCTCCCTATCCCCCACCAAAAGCTGTGGTGGTGGTGGTGCGGTGTCTTTGGTTTGCAGCCCCATGGCGTTaGTGGGTGGAATGGAAGGGA | + |
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Preference number: 4 (lower is better) Translates to: APYPPPKAVVVVVRCLWFAAPWR*WVEWKG Trigger: TCCCTTCCATTCCACCCACCAACGCCATGGGGCTGC...AAACCAAAGACACCGCACCACCACCACCACAGCTTTTGGTGGGGGATAGGGAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS-3UTR TCA 90 bp | CAAGCCGCTGTGACAACCATCCCCGGGGCCATGTTTGGACAGGCTAAGAACGGTTCGTCACTCACTGCCTaGGGGGCCTTTGTGGTTTTC | + |
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Preference number: 4 (lower is better) Translates to: QAAVTTIPGAMFGQAKNGSSLTA*GAFVVF Trigger: GAAAACCACAAAGGCCCCTCAGGCAGTGAGTGACGA...ACCGTTCTTAGCCTGTCCAAACATGGCCCCGGGGATGGTTGTCACAGCGGCTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS-3UTR TCA 90 bp | TTGCCTGCAGCAAGCCGCTGTGACAACCATCCCCGGGGCCATGTTTGGACAGGCCCTGCTGGTGTGATCTaGCGTCACCGAAATTCACTT | + |
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Preference number: 4 (lower is better) Translates to: LPAASRCDNHPRGHVWTGPAGVI*RHRNSL Trigger: AAGTGAATTTCGGTGACGTCAGATCACACCAGCAGG...GCCTGTCCAAACATGGCCCCGGGGATGGTTGTCACAGCGGCTTGCTGCAGGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS-3UTR GCA 90 bp | TGGGTATATTGTCTACTGGCTGGCATCTTGAAGACGCACAGCCCTCAGCCAAGGTGGGCCTCCTCCCTCTaGAGCCCCAGGACCACTGAA | + |
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Preference number: 4 (lower is better) Translates to: WVYCLLAGILKTHSPQPRWASSL*SPRTTE Trigger: TTCAGTGGTCCTGGGGCTGCAGAGGGAGGAGGCCCA...CCTTGGCTGAGGGCTGTGCGTCTTCAAGATGCCAGCCAGTAGACAATATACCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS-3UTR CCA 90 bp | TGTGGTGGTGGTGGTGCGGTGTCTTTGGTTTGGGTATATTGTCTACTGGCTGGCCTCTCCAAGGGGTCGTaGTTGATGGCCAGCCTCGCC | + |
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Preference number: 4 (lower is better) Translates to: CGGGGAVSLVWVYCLLAGLSKGS*LMASLA Trigger: GGCGAGGCTGGCCATCAACCACGACCCCTTGGAGAG...GCCAGCCAGTAGACAATATACCCAAACCAAAGACACCGCACCACCACCACCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS-3UTR CCA 90 bp | CCCCAGCCAACTTACTTAAAACACTTCTTGCCACGGGTCCCGCAGGATGGAAACCACCGGGGAGCTGGATaGGGACACGGTTGCTGTGGA | + |
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Preference number: 4 (lower is better) Translates to: PQPTYLKHFLPRVPQDGNHRGAG*GHGCCG Trigger: TCCACAGCAACCGTGTCCCCATCCAGCTCCCCGGTG...GTTTCCATCCTGCGGGACCCGTGGCAAGAAGTGTTTTAAGTAAGTTGGCTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS-3UTR TCA 90 bp | ACCAAAAGCTGTGGTGGTGGTGGTGCGGTGTCTTTGGTTTGGGTATATTGTCTACAGAGGCGGCCCTCGTaGGCCACCATATCCCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: TKSCGGGGAVSLVWVYCLQRRPS*ATISPG Trigger: CCCTGGGGATATGGTGGCTCACGAGGGCCGCCTCTG...TAGACAATATACCCAAACCAAAGACACCGCACCACCACCACCACAGCTTTTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS-3UTR GCA 90 bp | GCTCCCTATCCCCCACCAAAAGCTGTGGTGGTGGTGGTGCGGTGTCTTTGGTTTTCAGCTCGTTATCCCTaGTGTCCGCAGGGATGGGAA | + |
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Preference number: 4 (lower is better) Translates to: APYPPPKAVVVVVRCLWFSARYP*CPQGWE Trigger: TTCCCATCCCTGCGGACAGCAGGGATAACGAGCTGA...AAACCAAAGACACCGCACCACCACCACCACAGCTTTTGGTGGGGGATAGGGAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS-3UTR GCA 90 bp | CAAGCCGCTGTGACAACCATCCCCGGGGCCATGTTTGGACAGGCTAAGAACGGTATATCCCCAGGGGCCTaGAGGAAATGTGGTCGGAAA | + |
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Preference number: 4 (lower is better) Translates to: QAAVTTIPGAMFGQAKNGISPGA*RKCGRK Trigger: TTTCCGACCACATTTCCTGCAGGCCCCTGGGGATAT...ACCGTTCTTAGCCTGTCCAAACATGGCCCCGGGGATGGTTGTCACAGCGGCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS-3UTR CCA 90 bp | CATCTTGAAGACGCACAGCCCTCAGCCAAGGCTCAAAAAGCCCCAGCCAACTTACTGCTGCTGGAGGAATaGCTGCAGAGGTGGTGGGAG | + |
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Preference number: 4 (lower is better) Translates to: HLEDAQPSAKAQKAPANLLLLEE*LQRWWE Trigger: CTCCCACCACCTCTGCAGCCATTCCTCCAGCAGCAG...TAAGTTGGCTGGGGCTTTTTGAGCCTTGGCTGAGGGCTGTGCGTCTTCAAGATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS-3UTR CCA 90 bp | TGTGGTGGTGGTGGTGCGGTGTCTTTGGTTTGGGTATATTGTCTACTGGCTGGCCCTTCACCTGCTTGCTaGAGATGGTCACTGCCGGGG | + |
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Preference number: 4 (lower is better) Translates to: CGGGGAVSLVWVYCLLAGPSPAC*RWSLPG Trigger: CCCCGGCAGTGACCATCTCCAGCAAGCAGGTGAAGG...GCCAGCCAGTAGACAATATACCCAAACCAAAGACACCGCACCACCACCACCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS-3UTR CCA 90 bp | GCTCCCTATCCCCCACCAAAAGCTGTGGTGGTGGTGGTGCGGTGTCTTTGGTTTTGGCTCTGCTGGGCTTaGAGGAGCTGGCTCATTTTG | + |
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Preference number: 4 (lower is better) Translates to: APYPPPKAVVVVVRCLWFWLCWA*RSWLIL Trigger: CAAAATGAGCCAGCTCCTCCAAGCCCAGCAGAGCCA...AAACCAAAGACACCGCACCACCACCACCACAGCTTTTGGTGGGGGATAGGGAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS-3UTR TCA 90 bp | TTTGGAAACCACTGCATACGGTCAGTCGTCTTCCTACCCCTCCACAGTCCACCCAGAGGTGGTGGGAGGTaGGGACACCTCATTTGGCTT | + |
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Preference number: 4 (lower is better) Translates to: FGNHCIRSVVFLPLHSPPRGGGR*GHLIWL Trigger: AAGCCAAATGAGGTGTCCTCACCTCCCACCACCTCT...GGGTGGACTGTGGAGGGGTAGGAAGACGACTGACCGTATGCAGTGGTTTCCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS-3UTR TCA 90 bp | GCCCCAGCCAACTTACTTAAAACACTTCTTGCCACGGGTCCCGCAGGATGGAAACTGGACCTTCCTCTGTaGGACAGAGCAGGGCTGAGT | + |
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Preference number: 4 (lower is better) Translates to: APANLLKTLLATGPAGWKLDLPL*DRAGLS Trigger: ACTCAGCCCTGCTCTGTCTCACAGAGGAAGGTCCAG...TTTCCATCCTGCGGGACCCGTGGCAAGAAGTGTTTTAAGTAAGTTGGCTGGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS-3UTR TCA 90 bp | CATCTTGAAGACGCACAGCCCTCAGCCAAGGCTCAAAAAGCCCCAGCCAACTTAGGCTTCGTTCTTGGCTaGCAGTGTGTACCACCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HLEDAQPSAKAQKAPANLGFVLG*QCVPPS Trigger: GCTGGGTGGTACACACTGTCAGCCAAGAACGAAGCC...TAAGTTGGCTGGGGCTTTTTGAGCCTTGGCTGAGGGCTGTGCGTCTTCAAGATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095580.3 ENSMUST00000218978.2 |
||
| CDS-3UTR GCA 90 bp | CACCAAAAGCTGTGGTGGTGGTGGTGCGGTGTCTTTGGTTTGGGTATATTGTCTAGTGGGGAAGGCTGGTaGTCAGCCACAGCCGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: HQKLWWWWCGVFGLGILSSGEGW*SATAGL Trigger: CAACCCGGCTGTGGCTGAGCACCAGCCTTCCCCACT...AGACAATATACCCAAACCAAAGACACCGCACCACCACCACCACAGCTTTTGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR GCA 90 bp | GCTCCCTATCCCCCACCAAAAGCTGTGGTGGTGGTGGTGCGGTGTCTTTGGTTTTCGGGTAGCACAGGTTaGCCATTGAGTAGCCATGTC | + |
|
Preference number: 4 (lower is better) Translates to: APYPPPKAVVVVVRCLWFSGSTG*PLSSHV Trigger: GACATGGCTACTCAATGGGCAACCTGTGCTACCCGA...AAACCAAAGACACCGCACCACCACCACCACAGCTTTTGGTGGGGGATAGGGAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR CCA 90 bp | TTTGGAAACCACTGCATACGGTCAGTCGTCTTCCTACCCCTCCACAGTCCACCCCGAAGGCCTCGGCGATaGTCAGTGAGTGAAGGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FGNHCIRSVVFLPLHSPPRRPRR*SVSEGF Trigger: GAAACCTTCACTCACTGACCATCGCCGAGGCCTTCG...GGGTGGACTGTGGAGGGGTAGGAAGACGACTGACCGTATGCAGTGGTTTCCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR CCA 90 bp | GCCCCAGCCAACTTACTTAAAACACTTCTTGCCACGGGTCCCGCAGGATGGAAAGGGACACGGTTGCTGTaGAAGTGCTTGAAGCGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: APANLLKTLLATGPAGWKGTRLL*KCLKRG Trigger: TCCCCGCTTCAAGCACTTCCACAGCAACCGTGTCCC...TTTCCATCCTGCGGGACCCGTGGCAAGAAGTGTTTTAAGTAAGTTGGCTGGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR CCA 90 bp | CCCCCACCAAAAGCTGTGGTGGTGGTGGTGCGGTGTCTTTGGTTTGGGTATATTCTGACCAGCATCTTGTaGGAGGCGTCGGGTAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: PPPKAVVVVVRCLWFGYILTSIL*EASGST Trigger: TGTGCTACCCGACGCCTCCCACAAGATGCTGGTCAG...AATATACCCAAACCAAAGACACCGCACCACCACCACCACAGCTTTTGGTGGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR CCA 90 bp | TGTGGTGGTGGTGGTGCGGTGTCTTTGGTTTGGGTATATTGTCTACTGGCTGGCGTCGGACTTCTTGGCTaGCTGGATGAGGAGGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: CGGGGAVSLVWVYCLLAGVGLLG*LDEEAD Trigger: GTCTGCCTCCTCATCCAGCCAGCCAAGAAGTCCGAC...GCCAGCCAGTAGACAATATACCCAAACCAAAGACACCGCACCACCACCACCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095580.3 ENSMUST00000218978.2 |
||
| CDS-3UTR TCA 90 bp | GGGTCCCGCAGGATGGAAACTCACTCCAATCCAGTTGTTTGGAAACCACTGCATCAGCCCCAGGACCACTaGAATGGAAAGGGTTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GSRRMETHSNPVVWKPLHQPQDH*NGKGWR Trigger: CCTCCAACCCTTTCCATTTCAGTGGTCCTGGGGCTG...ATGCAGTGGTTTCCAAACAACTGGATTGGAGTGAGTTTCCATCCTGCGGGACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR TCA 90 bp | CATCTTGAAGACGCACAGCCCTCAGCCAAGGCTCAAAAAGCCCCAGCCAACTTAAGACGCTTCCTGGCTTaGGCTTCATCCACTCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HLEDAQPSAKAQKAPANLRRFLA*ASSTLS Trigger: GGAGAGAGTGGATGAAGCTCAAGCCAGGAAGCGTCT...TAAGTTGGCTGGGGCTTTTTGAGCCTTGGCTGAGGGCTGTGCGTCTTCAAGATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR TCA 90 bp | GGGTCCCGCAGGATGGAAACTCACTCCAATCCAGTTGTTTGGAAACCACTGCATCTCGGCGATGGTCAGTaGGTGAAGGTTTCCTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GSRRMETHSNPVVWKPLHLGDGQ*VKVSCL Trigger: CAGGCAGGAAACCTTCACTCACTGACCATCGCCGAG...ATGCAGTGGTTTCCAAACAACTGGATTGGAGTGAGTTTCCATCCTGCGGGACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR TCA 90 bp | TTGAAGACGCACAGCCCTCAGCCAAGGCTCAAAAAGCCCCAGCCAACTTACTTAAATGGCCAGAACAGCTaGTTCTCCCCTGGGGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LKTHSPQPRLKKPQPTYLNGQNS*FSPGGW Trigger: CCAACCCCCAGGGGAGAATCAGCTGTTCTGGCCATT...TAAGTAAGTTGGCTGGGGCTTTTTGAGCCTTGGCTGAGGGCTGTGCGTCTTCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR TCA 90 bp | TTGAAGACGCACAGCCCTCAGCCAAGGCTCAAAAAGCCCCAGCCAACTTACTTATCTTGGCTGGCTGGATaGGGAGGCAGACATAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LKTHSPQPRLKKPQPTYLSWLAG*GGRHSL Trigger: CAGGCTATGTCTGCCTCCTCATCCAGCCAGCCAAGA...TAAGTAAGTTGGCTGGGGCTTTTTGAGCCTTGGCTGAGGGCTGTGCGTCTTCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095580.3 ENSMUST00000218978.2 |
||
| CDS-3UTR GCA 90 bp | ATGCTAAGCAGGGGCTCATTTAATGAATTCACCAGGATGACGGGGATGGATGTAGCGAAGAGCCAGGGGTaGTGTCTCCAGCCGCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: MLSRGSFNEFTRMTGMDVAKSQG*CLQPQP Trigger: AGGCTGCGGCTGGAGACAGCACCCCTGGCTCTTCGC...TACATCCATCCCCGTCATCCTGGTGAATTCATTAAATGAGCCCCTGCTTAGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS-3UTR GCA 90 bp | CATCTTGAAGACGCACAGCCCTCAGCCAAGGCTCAAAAAGCCCCAGCCAACTTAGCAGGACCCTTCACCTaGTTGCTGGAGATGGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: HLEDAQPSAKAQKAPANLAGPFT*LLEMVT Trigger: AGTGACCATCTCCAGCAAGCAGGTGAAGGGTCCTGC...TAAGTTGGCTGGGGCTTTTTGAGCCTTGGCTGAGGGCTGTGCGTCTTCAAGATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR GCA 90 bp | ATGGAAACTCACTCCAATCCAGTTGTTTGGAAACCACTGCATACGGTCAGTCGTTGGCGCTGCTGGCTCTaGTGGGCTTGGAGGAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: METHSNPVVWKPLHTVSRWRCWL*WAWRSW Trigger: CCAGCTCCTCCAAGCCCAGCAGAGCCAGCAGCGCCA...ACGACTGACCGTATGCAGTGGTTTCCAAACAACTGGATTGGAGTGAGTTTCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR GCA 90 bp | AAAGCCCCAGCCAACTTACTTAAAACACTTCTTGCCACGGGTCCCGCAGGATGGCAAAGATGGGCGCGATaGACTTGCCCGTGGGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: KAPANLLKTLLATGPAGWQRWAR*TCPWGF Trigger: AAATCCCCACGGGCAAGTGCATCGCGCCCATCTTTG...CCATCCTGCGGGACCCGTGGCAAGAAGTGTTTTAAGTAAGTTGGCTGGGGCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR CCA 90 bp | GGCTCATTTAATGAATTCACCAGGATGACGGGGATGGATGTAACCCACGAAAGGTGTTGGTGGCGCTGCTaGCTCTGCTGGGCTTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GSFNEFTRMTGMDVTHERCWWRC*LCWAWR Trigger: CCTCCAAGCCCAGCAGAGCCAGCAGCGCCACCAACA...CCTTTCGTGGGTTACATCCATCCCCGTCATCCTGGTGAATTCATTAAATGAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR CCA 90 bp | CCCCCACCAAAAGCTGTGGTGGTGGTGGTGCGGTGTCTTTGGTTTGGGTATATTCATGGCGTTGGTGGGTaGAATGGAAGGGAGAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PPPKAVVVVVRCLWFGYIHGVGG*NGRERR Trigger: CCTTCTCTCCCTTCCATTCCACCCACCAACGCCATG...AATATACCCAAACCAAAGACACCGCACCACCACCACCACAGCTTTTGGTGGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR CCA 90 bp | CCCCCACCAAAAGCTGTGGTGGTGGTGGTGCGGTGTCTTTGGTTTGGGTATATTGCCTTTTGTCAAAGATaGGCGCGATGCACTTGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: PPPKAVVVVVRCLWFGYIAFCQR*ARCTCP Trigger: CGGGCAAGTGCATCGCGCCCATCTTTGACAAAAGGC...AATATACCCAAACCAAAGACACCGCACCACCACCACCACAGCTTTTGGTGGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR CCA 90 bp | GCCCCAGCCAACTTACTTAAAACACTTCTTGCCACGGGTCCCGCAGGATGGAAAGGGACGCCGCTGTTCTaGAGTTTCTCCAGGATCACT | + |
|
Preference number: 4 (lower is better) Translates to: APANLLKTLLATGPAGWKGTPLF*SFSRIT Trigger: AGTGATCCTGGAGAAACTCCAGAACAGCGGCGTCCC...TTTCCATCCTGCGGGACCCGTGGCAAGAAGTGTTTTAAGTAAGTTGGCTGGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095580.3 ENSMUST00000218978.2 |
||
| CDS-3UTR CCA 90 bp | TGGGTATATTGTCTACTGGCTGGCATCTTGAAGACGCACAGCCCTCAGCCAAGGGGGACGCCGCTGTTCTaGAGTTTCTCCAGGATCACT | + |
|
Preference number: 4 (lower is better) Translates to: WVYCLLAGILKTHSPQPRGTPLF*SFSRIT Trigger: AGTGATCCTGGAGAAACTCCAGAACAGCGGCGTCCC...CCTTGGCTGAGGGCTGTGCGTCTTCAAGATGCCAGCCAGTAGACAATATACCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095580.3 ENSMUST00000218978.2 |
||
| CDS-3UTR TCA 90 bp | CTAGCATCCCTAACACACCGGGTGGGGGAGCATGCTAGCTCCCTATCCCCCACCAATCTCAGCGGAAGTTaGATCTGTCCCATAAATGTT | + |
|
Preference number: 4 (lower is better) Translates to: LASLTHRVGEHASSLSPTNLSGS*ICPINV Trigger: AACATTTATGGGACAGATTCAACTTCCGCTGAGATT...GGTGGGGGATAGGGAGCTAGCATGCTCCCCCACCCGGTGTGTTAGGGATGCTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR TCA 90 bp | CGCAGGATGGAAACTCACTCCAATCCAGTTGTTTGGAAACCACTGCATACGGTCTCTTGGCTGGCTGGATaGGGAGGCAGACATAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RRMETHSNPVVWKPLHTVSWLAG*GGRHSL Trigger: CAGGCTATGTCTGCCTCCTCATCCAGCCAGCCAAGA...GACCGTATGCAGTGGTTTCCAAACAACTGGATTGGAGTGAGTTTCCATCCTGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095580.3 ENSMUST00000218978.2 |
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| CDS-3UTR GCA 90 bp | CACCAAAAGCTGTGGTGGTGGTGGTGCGGTGTCTTTGGTTTGGGTATATTGTCTCAAAGGCTGGGCTTCTaGTGCTGGAGGAATGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HQKLWWWWCGVFGLGILSQRLGF*CWRNGC Trigger: GCAGCCATTCCTCCAGCAGCAGAAGCCCAGCCTTTG...AGACAATATACCCAAACCAAAGACACCGCACCACCACCACCACAGCTTTTGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS-3UTR CCA 90 bp | TGTGGTGGTGGTGGTGCGGTGTCTTTGGTTTGGGTATATTGTCTACTGGCTGGCTCCGTCTTGCTCTTGTaGTTTTTGCAGGCCCGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: CGGGGAVSLVWVYCLLAGSVLLL*FLQARG Trigger: ACCTCGGGCCTGCAAAAACCACAAGAGCAAGACGGA...GCCAGCCAGTAGACAATATACCCAAACCAAAGACACCGCACCACCACCACCACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR CCA 90 bp | ACCAAAAGCTGTGGTGGTGGTGGTGCGGTGTCTTTGGTTTGGGTATATTGTCTATGCTGTCCGCAGGGATaGGAATGGGGACCGATGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TKSCGGGGAVSLVWVYCLCCPQG*EWGPML Trigger: GAGCATCGGTCCCCATTCCCATCCCTGCGGACAGCA...TAGACAATATACCCAAACCAAAGACACCGCACCACCACCACCACAGCTTTTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS-3UTR CCA 90 bp | TGTGGTGGTGGTGGTGCGGTGTCTTTGGTTTGGGTATATTGTCTACTGGCTGGCGAGATCTGCCTTGTGTaGAGGGGTGGGCCATTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: CGGGGAVSLVWVYCLLAGEICLV*RGGPLR Trigger: TCTTAATGGCCCACCCCTCCACACAAGGCAGATCTC...GCCAGCCAGTAGACAATATACCCAAACCAAAGACACCGCACCACCACCACCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS-3UTR CCA 90 bp | AAACACTTCTTGCCACGGGTCCCGCAGGATGGAAACTCACTCCAATCCAGTTGTCTGGCTCATTTTGGATaGAGAGCCCGCCAGGAGATC | + |
|
Preference number: 4 (lower is better) Translates to: KHFLPRVPQDGNSLQSSCLAHFG*RARQEI Trigger: GATCTCCTGGCGGGCTCTCCATCCAAAATGAGCCAG...ACAACTGGATTGGAGTGAGTTTCCATCCTGCGGGACCCGTGGCAAGAAGTGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS-3UTR CCA 90 bp | TTGAAGACGCACAGCCCTCAGCCAAGGCTCAAAAAGCCCCAGCCAACTTACTTATGCCGGCTTCGTTCTTaGCTGACAGTGTGTACCACC | + |
|
Preference number: 4 (lower is better) Translates to: LKTHSPQPRLKKPQPTYLCRLRS*LTVCTT Trigger: GGTGGTACACACTGTCAGCCAAGAACGAAGCCGGCA...TAAGTAAGTTGGCTGGGGCTTTTTGAGCCTTGGCTGAGGGCTGTGCGTCTTCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095580.3 ENSMUST00000218978.2 |
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| 3UTR CAA 72 bp | ACGGGTCCCGCAGGATGGAAACTCACTCCAATCCAGTaGTTTGGAAACCACTGCATACGGTCAGTCGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TGPAGWKLTPIQ*FGNHCIRSVVF Trigger: GAAGACGACTGACCGTATGCAGTGGTTTCCAAACAACTGGATTGGAGTGAGTTTCCATCCTGCGGGACCCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095580.3 ENSMUST00000218978.2 |
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| CDS-3UTR TCA 90 bp | GCCCCAGCCAACTTACTTAAAACACTTCTTGCCACGGGTCCCGCAGGATGGAAAATCCTCTTGGAGCTGTaGGCCTTGAAAAGGGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: APANLLKTLLATGPAGWKILLEL*ALKREE Trigger: TTCCTCCCTTTTCAAGGCTCACAGCTCCAAGAGGAT...TTTCCATCCTGCGGGACCCGTGGCAAGAAGTGTTTTAAGTAAGTTGGCTGGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR TCA 90 bp | GGCTCATTTAATGAATTCACCAGGATGACGGGGATGGATGTAACCCACGAAAGGGCACAGGTTGCCCATTaGGTAGCCATGTCAGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: GSFNEFTRMTGMDVTHERAQVAH*VAMSAP Trigger: CGGAGCTGACATGGCTACTCAATGGGCAACCTGTGC...CCTTTCGTGGGTTACATCCATCCCCGTCATCCTGGTGAATTCATTAAATGAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR TCA 90 bp | GGCTCATTTAATGAATTCACCAGGATGACGGGGATGGATGTAACCCACGAAAGGGGCTTCGTTCTTGGCTaGCAGTGTGTACCACCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GSFNEFTRMTGMDVTHERGFVLG*QCVPPS Trigger: GCTGGGTGGTACACACTGTCAGCCAAGAACGAAGCC...CCTTTCGTGGGTTACATCCATCCCCGTCATCCTGGTGAATTCATTAAATGAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095580.3 ENSMUST00000218978.2 |
||
| CDS-3UTR GCA 90 bp | TTACTTAAAACACTTCTTGCCACGGGTCCCGCAGGATGGAAACTCACTCCAATCAGGCTGGGCTTCTGCTaGTGGAGGAATGGCTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LLKTLLATGPAGWKLTPIRLGFC*WRNGCR Trigger: TCTGCAGCCATTCCTCCAGCAGCAGAAGCCCAGCCT...GATTGGAGTGAGTTTCCATCCTGCGGGACCCGTGGCAAGAAGTGTTTTAAGTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR CCA 90 bp | TATCCTAAGGTTGCTAACTTCTCTCAGCCCTCGCTATGGCTCCTAATTGCTCCTTGGCTGCAGAGGTGGTaGGAGGTGAGGACACCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: YPKVANFSQPSLWLLIAPWLQRW*EVRTPH Trigger: ATGAGGTGTCCTCACCTCCCACCACCTCTGCAGCCA...AGGAGCAATTAGGAGCCATAGCGAGGGCTGAGAGAAGTTAGCAACCTTAGGATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR CCA 90 bp | TTGAAGACGCACAGCCCTCAGCCAAGGCTCAAAAAGCCCCAGCCAACTTACTTACCGTCATCATCGCCGTaGGTGGACTCAATGTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: LKTHSPQPRLKKPQPTYLPSSSP*VDSMCS Trigger: ACTACACATTGAGTCCACCCACGGCGATGATGACGG...TAAGTAAGTTGGCTGGGGCTTTTTGAGCCTTGGCTGAGGGCTGTGCGTCTTCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR CCA 90 bp | CACCAAAAGCTGTGGTGGTGGTGGTGCGGTGTCTTTGGTTTGGGTATATTGTCTTGCCGGCTTCGTTCTTaGCTGACAGTGTGTACCACC | + |
|
Preference number: 4 (lower is better) Translates to: HQKLWWWWCGVFGLGILSCRLRS*LTVCTT Trigger: GGTGGTACACACTGTCAGCCAAGAACGAAGCCGGCA...AGACAATATACCCAAACCAAAGACACCGCACCACCACCACCACAGCTTTTGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095580.3 ENSMUST00000218978.2 |
||
| CDS-3UTR TCA 90 bp | TGTGGTGGTGGTGGTGCGGTGTCTTTGGTTTGGGTATATTGTCTACTGGCTGGCTGGAGCTGTGAGCCTTaGAAAGGGAGGAAAGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: CGGGGAVSLVWVYCLLAGWSCEP*KGRKVL Trigger: AAGAACTTTCCTCCCTTTTCAAGGCTCACAGCTCCA...GCCAGCCAGTAGACAATATACCCAAACCAAAGACACCGCACCACCACCACCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR TCA 90 bp | GAGTTATTACCCAGCAGGTCTATTTCAAAGGTGTCCATTAAGCTCGGTACCCATTGCAGGCCCGAGGTCTaGTCCTCTTGGAGCTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: ELLPSRSISKVSIKLGTHCRPEV*SSWSCE Trigger: CTCACAGCTCCAAGAGGATCAGACCTCGGGCCTGCA...ATGGGTACCGAGCTTAATGGACACCTTTGAAATAGACCTGCTGGGTAATAACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR TCA 90 bp | TATCCTAAGGTTGCTAACTTCTCTCAGCCCTCGCTATGGCTCCTAATTGCTCCTGTTAGGGTCCCCTTCTaGGTCAGAGGAAGAGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: YPKVANFSQPSLWLLIAPVRVPF*VRGRDS Trigger: GGAGTCTCTTCCTCTGACTCAGAAGGGGACCCTAAC...AGGAGCAATTAGGAGCCATAGCGAGGGCTGAGAGAAGTTAGCAACCTTAGGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR TCA 90 bp | TATCCTAAGGTTGCTAACTTCTCTCAGCCCTCGCTATGGCTCCTAATTGCTCCTGGGCTCCTTGATAGGTaGGGAAGGCTCTGGGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: YPKVANFSQPSLWLLIAPGLLDR*GRLWDS Trigger: AGAATCCCAGAGCCTTCCTCACCTATCAAGGAGCCC...AGGAGCAATTAGGAGCCATAGCGAGGGCTGAGAGAAGTTAGCAACCTTAGGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR TCA 90 bp | GCTCCCTATCCCCCACCAAAAGCTGTGGTGGTGGTGGTGCGGTGTCTTTGGTTTATTTGCTGGTGCCACTaGGCATATATATCCAACCTA | + |
|
Preference number: 4 (lower is better) Translates to: APYPPPKAVVVVVRCLWFICWCH*AYISNL Trigger: TAGGTTGGATATATATGCTCAGTGGCACCAGCAAAT...AAACCAAAGACACCGCACCACCACCACCACAGCTTTTGGTGGGGGATAGGGAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095580.3 ENSMUST00000218978.2 |
||
| CDS-3UTR CCA 90 bp | GTAACCAGCGGAGTGGGAAATCTGAGTGTCCTAGGAAACCCTCTCCCGTTTTGTCAATACCACCTTACTTaGGGCGGTGGAATTCCTACC | + |
|
Preference number: 4 (lower is better) Translates to: VTSGVGNLSVLGNPLPFCQYHLT*GGGIPT Trigger: GGTAGGAATTCCACCGCCCCAAGTAAGGTGGTATTG...ACAAAACGGGAGAGGGTTTCCTAGGACACTCAGATTTCCCACTCCGCTGGTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR CCA 90 bp | GGCTCATTTAATGAATTCACCAGGATGACGGGGATGGATGTAACCCACGAAAGGCGTGCAGATCTCCTCTaGTTCTGCCATGGATCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GSFNEFTRMTGMDVTHERRADLL*FCHGSR Trigger: CCTCGATCCATGGCAGAACCAGAGGAGATCTGCACG...CCTTTCGTGGGTTACATCCATCCCCGTCATCCTGGTGAATTCATTAAATGAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR CCA 90 bp | TTACCCAGCAGGTCTATTTCAAAGGTGTCCATTAAGCTCGGTACCCATCCAGGCGACCGGGGCTCATTATaGTTCACCAGAACCCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LPSRSISKVSIKLGTHPGDRGSL*FTRTPS Trigger: TGAAGGGGTTCTGGTGAACCATAATGAGCCCCGGTC...GCCTGGATGGGTACCGAGCTTAATGGACACCTTTGAAATAGACCTGCTGGGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR CCA 90 bp | ATGGAAACTCACTCCAATCCAGTTGTTTGGAAACCACTGCATACGGTCAGTCGTGTCGGACTTCTTGGCTaGCTGGATGAGGAGGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: METHSNPVVWKPLHTVSRVGLLG*LDEEAD Trigger: GTCTGCCTCCTCATCCAGCCAGCCAAGAAGTCCGAC...ACGACTGACCGTATGCAGTGGTTTCCAAACAACTGGATTGGAGTGAGTTTCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095580.3 ENSMUST00000218978.2 |
||
| CDS-3UTR TCA 90 bp | CGCAGGATGGAAACTCACTCCAATCCAGTTGTTTGGAAACCACTGCATACGGTCCTTTCTCTCAGGAGTTaGGAGATGGAAGTGGATGCC | + |
|
Preference number: 4 (lower is better) Translates to: RRMETHSNPVVWKPLHTVLSLRS*EMEVDA Trigger: GGCATCCACTTCCATCTCTCAACTCCTGAGAGAAAG...GACCGTATGCAGTGGTTTCCAAACAACTGGATTGGAGTGAGTTTCCATCCTGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR TCA 90 bp | TGGGTATATTGTCTACTGGCTGGCATCTTGAAGACGCACAGCCCTCAGCCAAGGAAAACACCTCAGCAATaGCTAACGTGCAGATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: WVYCLLAGILKTHSPQPRKTPQQ*LTCRSP Trigger: AGGAGATCTGCACGTTAGTCATTGCTGAGGTGTTTT...CCTTGGCTGAGGGCTGTGCGTCTTCAAGATGCCAGCCAGTAGACAATATACCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR TCA 90 bp | TATCCTAAGGTTGCTAACTTCTCTCAGCCCTCGCTATGGCTCCTAATTGCTCCTTGGCTTCCTGTCCATTaGACCTCTCGGGGAAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: YPKVANFSQPSLWLLIAPWLPVH*TSRGRN Trigger: ATTCCTTCCCCGAGAGGTTCAATGGACAGGAAGCCA...AGGAGCAATTAGGAGCCATAGCGAGGGCTGAGAGAAGTTAGCAACCTTAGGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR TCA 90 bp | TTACTTAAAACACTTCTTGCCACGGGTCCCGCAGGATGGAAACTCACTCCAATCTGCTGTGGAAGTGCTTaGAGCGGGGAAGAAGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLKTLLATGPAGWKLTPICCGSA*SGEEVL Trigger: AAGCACTTCTTCCCCGCTTCAAGCACTTCCACAGCA...GATTGGAGTGAGTTTCCATCCTGCGGGACCCGTGGCAAGAAGTGTTTTAAGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR GCA 90 bp | CCCCCACCAAAAGCTGTGGTGGTGGTGGTGCGGTGTCTTTGGTTTGGGTATATTTTTGGGATTCCGTCTTaGTCTTGTGGTTTTTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PPPKAVVVVVRCLWFGYIFGIPS*SCGFCR Trigger: CCTGCAAAAACCACAAGAGCAAGACGGAATCCCAAA...AATATACCCAAACCAAAGACACCGCACCACCACCACCACAGCTTTTGGTGGGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR GCA 90 bp | GGCTCATTTAATGAATTCACCAGGATGACGGGGATGGATGTAACCCACGAAAGGTCAAAGACAACCAGCTaGCCCTCAGAGGCTGACAAG | + |
|
Preference number: 4 (lower is better) Translates to: GSFNEFTRMTGMDVTHERSKTTS*PSEADK Trigger: CTTGTCAGCCTCTGAGGGGCAGCTGGTTGTCTTTGA...CCTTTCGTGGGTTACATCCATCCCCGTCATCCTGGTGAATTCATTAAATGAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR GCA 90 bp | ACCAAAAGCTGTGGTGGTGGTGGTGCGGTGTCTTTGGTTTGGGTATATTGTCTAGGGCCCCTTTCACTCTaGACTCAAAGACAACCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TKSCGGGGAVSLVWVYCLGPLSL*TQRQPA Trigger: AGCTGGTTGTCTTTGAGTGCAGAGTGAAAGGGGCCC...TAGACAATATACCCAAACCAAAGACACCGCACCACCACCACCACAGCTTTTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR GCA 90 bp | TTACTTAAAACACTTCTTGCCACGGGTCCCGCAGGATGGAAACTCACTCCAATCACCGCTCCCAGAGGATaGCTCCATATCTTTGTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: LLKTLLATGPAGWKLTPITAPRG*LHIFVV Trigger: GACGACAAAGATATGGAGGCATCCTCTGGGAGCGGT...GATTGGAGTGAGTTTCCATCCTGCGGGACCCGTGGCAAGAAGTGTTTTAAGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR CCA 90 bp | AAACACTTCTTGCCACGGGTCCCGCAGGATGGAAACTCACTCCAATCCAGTTGTTGTCCCCACGATGTCTaGTTTCAGCCAGGTAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: KHFLPRVPQDGNSLQSSCCPHDV*FQPGNF Trigger: AAAGTTACCTGGCTGAAACCAGACATCGTGGGGACA...ACAACTGGATTGGAGTGAGTTTCCATCCTGCGGGACCCGTGGCAAGAAGTGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR CCA 90 bp | GTAACCAGCGGAGTGGGAAATCTGAGTGTCCTAGGAAACCCTCTCCCGTTTTGTCCTTACTTGGGGCGGTaGAATTCCTACCACTATACA | + |
|
Preference number: 4 (lower is better) Translates to: VTSGVGNLSVLGNPLPFCPYLGR*NSYHYT Trigger: TGTATAGTGGTAGGAATTCCACCGCCCCAAGTAAGG...ACAAAACGGGAGAGGGTTTCCTAGGACACTCAGATTTCCCACTCCGCTGGTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR CCA 90 bp | TTACTTAAAACACTTCTTGCCACGGGTCCCGCAGGATGGAAACTCACTCCAATCCAGCCACAGCCGGGTTaGTGGTTGAATTTGCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LLKTLLATGPAGWKLTPIQPQPG*WLNLLS Trigger: ACTCAGCAAATTCAACCACCAACCCGGCTGTGGCTG...GATTGGAGTGAGTTTCCATCCTGCGGGACCCGTGGCAAGAAGTGTTTTAAGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR CCA 90 bp | GGGTCCCGCAGGATGGAAACTCACTCCAATCCAGTTGTTTGGAAACCACTGCATTTCTTCATTAGACCCTaGGATGGTACAGATGGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: GSRRMETHSNPVVWKPLHFFIRP*DGTDGA Trigger: CGCACCATCTGTACCATCCCAGGGTCTAATGAAGAA...ATGCAGTGGTTTCCAAACAACTGGATTGGAGTGAGTTTCCATCCTGCGGGACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR CCA 90 bp | GTAACCAGCGGAGTGGGAAATCTGAGTGTCCTAGGAAACCCTCTCCCGTTTTGTCTCTTTCCTGCATTCTaGACCTTCCTCTGTGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: VTSGVGNLSVLGNPLPFCLFPAF*TFLCET Trigger: TGTCTCACAGAGGAAGGTCCAGAATGCAGGAAAGAG...ACAAAACGGGAGAGGGTTTCCTAGGACACTCAGATTTCCCACTCCGCTGGTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR CCA 90 bp | ATGGAAACTCACTCCAATCCAGTTGTTTGGAAACCACTGCATACGGTCAGTCGTTCGATGAGCAGAGAGTaGACTCCCGTCTCTCTGACC | + |
|
Preference number: 4 (lower is better) Translates to: METHSNPVVWKPLHTVSRSMSRE*TPVSLT Trigger: GGTCAGAGAGACGGGAGTCCACTCTCTGCTCATCGA...ACGACTGACCGTATGCAGTGGTTTCCAAACAACTGGATTGGAGTGAGTTTCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095580.3 ENSMUST00000218978.2 |
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| CDS-3UTR TCA 90 bp | TATCCTAAGGTTGCTAACTTCTCTCAGCCCTCGCTATGGCTCCTAATTGCTCCTGTTGGAAGCAAAGCATaGGTATCGTCCTGTGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: YPKVANFSQPSLWLLIAPVGSKA*VSSCVL Trigger: GAGGACACAGGACGATACTCATGCTTTGCTTCCAAC...AGGAGCAATTAGGAGCCATAGCGAGGGCTGAGAGAAGTTAGCAACCTTAGGATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR TCA 90 bp | GAGTTATTACCCAGCAGGTCTATTTCAAAGGTGTCCATTAAGCTCGGTACCCATCTGCCCCTCAGAGGCTaGCAAGTTCTGCAGCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: ELLPSRSISKVSIKLGTHLPLRG*QVLQHL Trigger: AAGATGCTGCAGAACTTGTCAGCCTCTGAGGGGCAG...ATGGGTACCGAGCTTAATGGACACCTTTGAAATAGACCTGCTGGGTAATAACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR TCA 90 bp | TGGGTATATTGTCTACTGGCTGGCATCTTGAAGACGCACAGCCCTCAGCCAAGGAGAGGCTTTCTTTGCTaGCTGTCCTCTGAATTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: WVYCLLAGILKTHSPQPRRGFLC*LSSELF Trigger: AAACAATTCAGAGGACAGTCAGCAAAGAAAGCCTCT...CCTTGGCTGAGGGCTGTGCGTCTTCAAGATGCCAGCCAGTAGACAATATACCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR GCA 90 bp | GCTCCCTATCCCCCACCAAAAGCTGTGGTGGTGGTGGTGCGGTGTCTTTGGTTTTTTCTCTTAGAAATCTaGTTCCCGTCTTTGAACCAA | + |
|
Preference number: 4 (lower is better) Translates to: APYPPPKAVVVVVRCLWFFLLEI*FPSLNQ Trigger: TTGGTTCAAAGACGGGAAGCAGATTTCTAAGAGAAA...AAACCAAAGACACCGCACCACCACCACCACAGCTTTTGGTGGGGGATAGGGAGC 49% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR CCA 90 bp | TTTCACGCCTTTCTAAGCAATTACTATCTCCAGCTAAAACCACTTGAGAAGGATGGAATAGGCGGCTGTTaGTGGCGCTGCTGGCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FHAFLSNYYLQLKPLEKDGIGGC*WRCWLC Trigger: GCAGAGCCAGCAGCGCCACCAACAGCCGCCTATTCC...ATCCTTCTCAAGTGGTTTTAGCTGGAGATAGTAATTGCTTAGAAAGGCGTGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR CCA 90 bp | CGCAGGATGGAAACTCACTCCAATCCAGTTGTTTGGAAACCACTGCATACGGTCCCCTGTACCATCAAATaGCCAGAACAGCTGATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RRMETHSNPVVWKPLHTVPCTIK*PEQLIL Trigger: GAGAATCAGCTGTTCTGGCCATTTGATGGTACAGGG...GACCGTATGCAGTGGTTTCCAAACAACTGGATTGGAGTGAGTTTCCATCCTGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR CCA 90 bp | ATGCTAAGCAGGGGCTCATTTAATGAATTCACCAGGATGACGGGGATGGATGTAGGCCTGCAGGAAATGTaGTCGGAAAAAGCGTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: MLSRGSFNEFTRMTGMDVGLQEM*SEKAFL Trigger: CAGGAACGCTTTTTCCGACCACATTTCCTGCAGGCC...TACATCCATCCCCGTCATCCTGGTGAATTCATTAAATGAGCCCCTGCTTAGCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| 3UTR CAA 72 bp | TCTTTGGTTTGGGTATATTGTCTACTGGCTGGCATCTaGAAGACGCACAGCCCTCAGCCAAGGCTCAAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SLVWVYCLLAGI*KTHSPQPRLKK Trigger: CTTTTTGAGCCTTGGCTGAGGGCTGTGCGTCTTCAAGATGCCAGCCAGTAGACAATATACCCAAACCAAAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095580.3 ENSMUST00000218978.2 |
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| CDS-3UTR TCA 90 bp | ACCAAAAGCTGTGGTGGTGGTGGTGCGGTGTCTTTGGTTTGGGTATATTGTCTATTCAAGGCACTCATGTaGAGAGACTCCTTGGGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: TKSCGGGGAVSLVWVYCLFKALM*RDSLGD Trigger: ATCACCCAAGGAGTCTCTTCACATGAGTGCCTTGAA...TAGACAATATACCCAAACCAAAGACACCGCACCACCACCACCACAGCTTTTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS-3UTR GCA 90 bp | AAAGCCCCAGCCAACTTACTTAAAACACTTCTTGCCACGGGTCCCGCAGGATGGAGTTTTCAAGCTCCTTaGCTTCACAATACCACCTTA | + |
|
Preference number: 4 (lower is better) Translates to: KAPANLLKTLLATGPAGWSFQAP*LHNTTL Trigger: TAAGGTGGTATTGTGAAGGCAAGGAGCTTGAAAACT...CCATCCTGCGGGACCCGTGGCAAGAAGTGTTTTAAGTAAGTTGGCTGGGGCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS-3UTR CCA 90 bp | TATCCTAAGGTTGCTAACTTCTCTCAGCCCTCGCTATGGCTCCTAATTGCTCCTTCATCTAACTCCTCTTaGCTCAGGAAGGCAGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: YPKVANFSQPSLWLLIAPSSNSS*LRKAER Trigger: CCTTTCTGCCTTCCTGAGCCAAGAGGAGTTAGATGA...AGGAGCAATTAGGAGCCATAGCGAGGGCTGAGAGAAGTTAGCAACCTTAGGATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS-3UTR CCA 90 bp | CACCAAAAGCTGTGGTGGTGGTGGTGCGGTGTCTTTGGTTTGGGTATATTGTCTCCTGCCTGCACAATGTaGATATCTGGAGAGTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: HQKLWWWWCGVFGLGILSPACTM*ISGEFS Trigger: TGAAAACTCTCCAGATATCCACATTGTGCAGGCAGG...AGACAATATACCCAAACCAAAGACACCGCACCACCACCACCACAGCTTTTGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR CCA 90 bp | GCCCCAGCCAACTTACTTAAAACACTTCTTGCCACGGGTCCCGCAGGATGGAAAGCCTCTGCTCAAAGCTaGAAATTTTATATTCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: APANLLKTLLATGPAGWKASAQS*KFYIPA Trigger: AGCAGGAATATAAAATTTCCAGCTTTGAGCAGAGGC...TTTCCATCCTGCGGGACCCGTGGCAAGAAGTGTTTTAAGTAAGTTGGCTGGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS-3UTR TCA 90 bp | ACCAAAAGCTGTGGTGGTGGTGGTGCGGTGTCTTTGGTTTGGGTATATTGTCTAATATTCCTGCTGGTGTaGTCTGACGTCACCGAAATT | + |
|
Preference number: 4 (lower is better) Translates to: TKSCGGGGAVSLVWVYCLIFLLV*SDVTEI Trigger: AATTTCGGTGACGTCAGATCACACCAGCAGGAATAT...TAGACAATATACCCAAACCAAAGACACCGCACCACCACCACCACAGCTTTTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR GCA 90 bp | GGCTCATTTAATGAATTCACCAGGATGACGGGGATGGATGTAACCCACGAAAGGAGAGATGGAAGTGGATaGCTCTATGCTGTCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GSFNEFTRMTGMDVTHERRDGSG*LYAVFL Trigger: CAAGAAGACAGCATAGAGGCATCCACTTCCATCTCT...CCTTTCGTGGGTTACATCCATCCCCGTCATCCTGGTGAATTCATTAAATGAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR GCA 90 bp | TATCCTAAGGTTGCTAACTTCTCTCAGCCCTCGCTATGGCTCCTAATTGCTCCTGAGGCTGACAAGTTCTaGAGCATCTTCGTAAACACT | + |
|
Preference number: 4 (lower is better) Translates to: YPKVANFSQPSLWLLIAPEADKF*SIFVNT Trigger: AGTGTTTACGAAGATGCTGCAGAACTTGTCAGCCTC...AGGAGCAATTAGGAGCCATAGCGAGGGCTGAGAGAAGTTAGCAACCTTAGGATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR GCA 90 bp | TTTCACGCCTTTCTAAGCAATTACTATCTCCAGCTAAAACCACTTGAGAAGGATGACCCTTCACCTGCTTaGTGGAGATGGTCACTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: FHAFLSNYYLQLKPLEKDDPSPA*WRWSLP Trigger: CGGCAGTGACCATCTCCAGCAAGCAGGTGAAGGGTC...ATCCTTCTCAAGTGGTTTTAGCTGGAGATAGTAATTGCTTAGAAAGGCGTGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR GCA 90 bp | TATCCTAAGGTTGCTAACTTCTCTCAGCCCTCGCTATGGCTCCTAATTGCTCCTAGACTAAAGGAATTCTaGCCGGTTTTGTTGGTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: YPKVANFSQPSLWLLIAPRLKEF*PVLLVA Trigger: GGCTACCAACAAAACCGGGCAGAATTCCTTTAGTCT...AGGAGCAATTAGGAGCCATAGCGAGGGCTGAGAGAAGTTAGCAACCTTAGGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095580.3 ENSMUST00000218978.2 |
||
| CDS-3UTR CCA 90 bp | TTACTTAAAACACTTCTTGCCACGGGTCCCGCAGGATGGAAACTCACTCCAATCTGTGAAGAGACTCCTTaGGTGATGAAGGAGATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLKTLLATGPAGWKLTPICEETP*VMKEMC Trigger: ACACATCTCCTTCATCACCCAAGGAGTCTCTTCACA...GATTGGAGTGAGTTTCCATCCTGCGGGACCCGTGGCAAGAAGTGTTTTAAGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR CCA 90 bp | ATGCTAAGCAGGGGCTCATTTAATGAATTCACCAGGATGACGGGGATGGATGTACCTGAGGGGCCTTTGTaGTTTTCTTCATTAGACCCT | + |
|
Preference number: 4 (lower is better) Translates to: MLSRGSFNEFTRMTGMDVPEGPL*FSSLDP Trigger: AGGGTCTAATGAAGAAAACCACAAAGGCCCCTCAGG...TACATCCATCCCCGTCATCCTGGTGAATTCATTAAATGAGCCCCTGCTTAGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR CCA 90 bp | GCCCCAGCCAACTTACTTAAAACACTTCTTGCCACGGGTCCCGCAGGATGGAAAGAACCAATAAACCTTTaGAACAGGTATCCCAACAAT | + |
|
Preference number: 4 (lower is better) Translates to: APANLLKTLLATGPAGWKEPINL*NRYPNN Trigger: ATTGTTGGGATACCTGTTCCAAAGGTTTATTGGTTC...TTTCCATCCTGCGGGACCCGTGGCAAGAAGTGTTTTAAGTAAGTTGGCTGGGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR CCA 90 bp | ACCAAAAGCTGTGGTGGTGGTGGTGCGGTGTCTTTGGTTTGGGTATATTGTCTATTTCTCCAGGATCACTaGCGCCTTCTTTACCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: TKSCGGGGAVSLVWVYCLFLQDH*RLLYLF Trigger: AAAGAGGTAAAGAAGGCGCCAGTGATCCTGGAGAAA...TAGACAATATACCCAAACCAAAGACACCGCACCACCACCACCACAGCTTTTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095580.3 ENSMUST00000218978.2 |
||
| CDS-3UTR TCA 90 bp | GGCTCATTTAATGAATTCACCAGGATGACGGGGATGGATGTAACCCACGAAAGGGTTGAATTTGCTGAGTaGAGAGCTCCATTATCACTG | + |
|
Preference number: 4 (lower is better) Translates to: GSFNEFTRMTGMDVTHERVEFAE*RAPLSL Trigger: CAGTGATAATGGAGCTCTTCACTCAGCAAATTCAAC...CCTTTCGTGGGTTACATCCATCCCCGTCATCCTGGTGAATTCATTAAATGAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR TCA 90 bp | TATCCTAAGGTTGCTAACTTCTCTCAGCCCTCGCTATGGCTCCTAATTGCTCCTATTTGCTGGTGCCACTaGGCATATATATCCAACCTA | + |
|
Preference number: 4 (lower is better) Translates to: YPKVANFSQPSLWLLIAPICWCH*AYISNL Trigger: TAGGTTGGATATATATGCTCAGTGGCACCAGCAAAT...AGGAGCAATTAGGAGCCATAGCGAGGGCTGAGAGAAGTTAGCAACCTTAGGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095580.3 ENSMUST00000218978.2 |
||
| CDS-3UTR GCA 90 bp | TTTCACGCCTTTCTAAGCAATTACTATCTCCAGCTAAAACCACTTGAGAAGGATTCCGGTAGGTTGAAGTaGACCCGTAGCCCAATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: FHAFLSNYYLQLKPLEKDSGRLK*TRSPIL Trigger: CAGGATTGGGCTACGGGTGCACTTCAACCTACCGGA...ATCCTTCTCAAGTGGTTTTAGCTGGAGATAGTAATTGCTTAGAAAGGCGTGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR GCA 90 bp | ATGCTAAGCAGGGGCTCATTTAATGAATTCACCAGGATGACGGGGATGGATGTAAGACTAAAGGAATTCTaGCCGGTTTTGTTGGTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: MLSRGSFNEFTRMTGMDVRLKEF*PVLLVA Trigger: GGCTACCAACAAAACCGGGCAGAATTCCTTTAGTCT...TACATCCATCCCCGTCATCCTGGTGAATTCATTAAATGAGCCCCTGCTTAGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000095580.3 ENSMUST00000218978.2 |
||
| CDS-3UTR CCA 90 bp | TTTCACGCCTTTCTAAGCAATTACTATCTCCAGCTAAAACCACTTGAGAAGGATCCAGGACCACTGAAATaGAAAGGGTTGGAGGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: FHAFLSNYYLQLKPLEKDPGPLK*KGLEEG Trigger: GCCCTCCTCCAACCCTTTCCATTTCAGTGGTCCTGG...ATCCTTCTCAAGTGGTTTTAGCTGGAGATAGTAATTGCTTAGAAAGGCGTGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR CCA 90 bp | TTTCACGCCTTTCTAAGCAATTACTATCTCCAGCTAAAACCACTTGAGAAGGATTCGATGAGCAGAGAGTaGACTCCCGTCTCTCTGACC | + |
|
Preference number: 4 (lower is better) Translates to: FHAFLSNYYLQLKPLEKDSMSRE*TPVSLT Trigger: GGTCAGAGAGACGGGAGTCCACTCTCTGCTCATCGA...ATCCTTCTCAAGTGGTTTTAGCTGGAGATAGTAATTGCTTAGAAAGGCGTGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR CCA 90 bp | ATGGAAACTCACTCCAATCCAGTTGTTTGGAAACCACTGCATACGGTCAGTCGTTTTCTCCAGGATCACTaGCGCCTTCTTTACCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: METHSNPVVWKPLHTVSRFLQDH*RLLYLF Trigger: AAAGAGGTAAAGAAGGCGCCAGTGATCCTGGAGAAA...ACGACTGACCGTATGCAGTGGTTTCCAAACAACTGGATTGGAGTGAGTTTCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095580.3 ENSMUST00000218978.2 |
||
| CDS-3UTR CCA 90 bp | GAGTTATTACCCAGCAGGTCTATTTCAAAGGTGTCCATTAAGCTCGGTACCCATGTTGAGAGATGGAAGTaGATGCCTCTATGCTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ELLPSRSISKVSIKLGTHVERWK*MPLCCL Trigger: AAGACAGCATAGAGGCATCCACTTCCATCTCTCAAC...ATGGGTACCGAGCTTAATGGACACCTTTGAAATAGACCTGCTGGGTAATAACTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR CCA 90 bp | ATGGAAACTCACTCCAATCCAGTTGTTTGGAAACCACTGCATACGGTCAGTCGTTTAGATCTGAGAAAGTaGGGCTGTTTTCCTGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: METHSNPVVWKPLHTVSRLDLRK*GCFPAE Trigger: TTCTGCAGGAAAACAGCCCCACTTTCTCAGATCTAA...ACGACTGACCGTATGCAGTGGTTTCCAAACAACTGGATTGGAGTGAGTTTCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS-3UTR CCA 90 bp | ATGCTAAGCAGGGGCTCATTTAATGAATTCACCAGGATGACGGGGATGGATGTAACCTCATTTGGCTTCTaGATTCGATTCATCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: MLSRGSFNEFTRMTGMDVTSFGF*IRFISS Trigger: AGAAGAGATGAATCGAATCCAGAAGCCAAATGAGGT...TACATCCATCCCCGTCATCCTGGTGAATTCATTAAATGAGCCCCTGCTTAGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS-3UTR GCA 90 bp | ATGGAAACTCACTCCAATCCAGTTGTTTGGAAACCACTGCATACGGTCAGTCGTGAAATTTTATATTCCTaGTGGTGTGATCTGACGTCA | + |
|
Preference number: 4 (lower is better) Translates to: METHSNPVVWKPLHTVSREILYS*WCDLTS Trigger: TGACGTCAGATCACACCAGCAGGAATATAAAATTTC...ACGACTGACCGTATGCAGTGGTTTCCAAACAACTGGATTGGAGTGAGTTTCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS-3UTR CCA 90 bp | GAGTTATTACCCAGCAGGTCTATTTCAAAGGTGTCCATTAAGCTCGGTACCCATAAAACTTTCTTGGACTaGGTTTCAGAACTGTACTGC | + |
|
Preference number: 4 (lower is better) Translates to: ELLPSRSISKVSIKLGTHKTFLD*VSELYC Trigger: GCAGTACAGTTCTGAAACCCAGTCCAAGAAAGTTTT...ATGGGTACCGAGCTTAATGGACACCTTTGAAATAGACCTGCTGGGTAATAACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS CCA 90 bp | ACAGGCGGGGGCATGCCTATGACCCGGCCCTCCAGTCGCACCGGGTaGCCCTCAGGGACGCCGCTGTTCTGGAGTTTCTCCAGGATCACT | + |
|
Preference number: 5 (lower is better) Translates to: TGGGMPMTRPSSRTG*PSGTPLFWSFSRIT Trigger: AGTGATCCTGGAGAAACTCCAGAACAGCGGCGTCCCTGAGGGCCACCCGGTGCGACTGGAGGGCCGGGTCATAGGCATGCCCCCGCCTGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095580.3 ENSMUST00000218978.2 |
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| CDS TCA 90 bp | TCTCGTTGTCTTTCTTCCAGTAGAACACAGGCGGGGGCATGCCTATaGCCCGGCCCTCCAGTCGCACCGGGTGGCCCTCAGGGACGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: SRCLSSSRTQAGACL*PGPPVAPGGPQGRR Trigger: GCGGCGTCCCTGAGGGCCACCCGGTGCGACTGGAGGGCCGGGTCATAGGCATGCCCCCGCCTGTGTTCTACTGGAAGAAAGACAACGAGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095580.3 ENSMUST00000218978.2 |
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| CDS CCA 90 bp | GCGCTGCTGGCTCTGCTGGGCTTGGAGGAGCTGGCTCATTTTGGATaGAGAGCCCGCCAGGAGATCTGCCTTGTGTGGAGGGGTGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: ALLALLGLEELAHFG*RARQEICLVWRGGP Trigger: TGGCCCACCCCTCCACACAAGGCAGATCTCCTGGCGGGCTCTCCATCCAAAATGAGCCAGCTCCTCCAAGCCCAGCAGAGCCAGCAGCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS CCA 90 bp | GGTGGCGCTGCTGGCTCTGCTGGGCTTGGAGGAGCTGGCTCATTTTaGATGGAGAGCCCGCCAGGAGATCTGCCTTGTGTGGAGGGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GGAAGSAGLGGAGSF*MESPPGDLPCVEGW Trigger: CCACCCCTCCACACAAGGCAGATCTCCTGGCGGGCTCTCCATCCAAAATGAGCCAGCTCCTCCAAGCCCAGCAGAGCCAGCAGCGCCACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS GCA 90 bp | TCCGCTAGGGATGGAATAGGCGGCTGTTGGTGGCGCTGCTGGCTCTaGTGGGCTTGGAGGAGCTGGCTCATTTTGGATGGAGAGCCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: SARDGIGGCWWRCWL*WAWRSWLILDGEPA Trigger: GGCGGGCTCTCCATCCAAAATGAGCCAGCTCCTCCAAGCCCAGCAGAGCCAGCAGCGCCACCAACAGCCGCCTATTCCATCCCTAGCGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS-3UTR CAA 90 bp | TTGCCTGCAGCAAGCCGCTGTGACAACCATCCCCGGGGCCATGTTTGGACAGGCTGGAATAGGCGGCTGTaGGTGGCGCTGCTGGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LPAASRCDNHPRGHVWTGWNRRL*VALLAL Trigger: CAGAGCCAGCAGCGCCACCAACAGCCGCCTATTCCA...GCCTGTCCAAACATGGCCCCGGGGATGGTTGTCACAGCGGCTTGCTGCAGGCAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS-3UTR CAA 90 bp | TTGCCTGCAGCAAGCCGCTGTGACAACCATCCCCGGGGCCATGTTTGGACAGGCGGACCCTTCACCTGCTaGCTGGAGATGGTCACTGCC | + |
|
Preference number: 5 (lower is better) Translates to: LPAASRCDNHPRGHVWTGGPFTC*LEMVTA Trigger: GGCAGTGACCATCTCCAGCAAGCAGGTGAAGGGTCC...GCCTGTCCAAACATGGCCCCGGGGATGGTTGTCACAGCGGCTTGCTGCAGGCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS-3UTR CAA 90 bp | CAAGCCGCTGTGACAACCATCCCCGGGGCCATGTTTGGACAGGCTAAGAACGGTGGCAGCCCCATGGCGTaGGTGGGTGGAATGGAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: QAAVTTIPGAMFGQAKNGGSPMA*VGGMEG Trigger: CCCTTCCATTCCACCCACCAACGCCATGGGGCTGCC...ACCGTTCTTAGCCTGTCCAAACATGGCCCCGGGGATGGTTGTCACAGCGGCTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS TCA 90 bp | CTTGAAGCGGGGAAGAAGTGCTTCGGCCGGGCCAGGTTGAACATCTaGGGCGCAGGACCCTTCACCTGCTTGCTGGAGATGGTCACTGCC | + |
|
Preference number: 5 (lower is better) Translates to: LEAGKKCFGRARLNI*GAGPFTCLLEMVTA Trigger: GGCAGTGACCATCTCCAGCAAGCAGGTGAAGGGTCCTGCGCCTCAGATGTTCAACCTGGCCCGGCCGAAGCACTTCTTCCCCGCTTCAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS TCA 90 bp | GGTAAGCCACTCACCTTACAGTCCAGCCGACAGAGGCGGCCCTCGTaGGCCACCATATCCCCAGGGGCCTGCAGGAAATGTGGTCGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: GKPLTLQSSRQRRPS*ATISPGACRKCGRK Trigger: TTTCCGACCACATTTCCTGCAGGCCCCTGGGGATATGGTGGCTCACGAGGGCCGCCTCTGTCGGCTGGACTGTAAGGTGAGTGGCTTACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS TCA 90 bp | TGGAAGTGCTTGAAGCGGGGAAGAAGTGCTTCGGCCGGGCCAGGTTaGACATCTGAGGCGCAGGACCCTTCACCTGCTTGCTGGAGATGG | + |
|
Preference number: 5 (lower is better) Translates to: WKCLKRGRSASAGPG*TSEAQDPSPACWRW Trigger: CCATCTCCAGCAAGCAGGTGAAGGGTCCTGCGCCTCAGATGTTCAACCTGGCCCGGCCGAAGCACTTCTTCCCCGCTTCAAGCACTTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS GCA 90 bp | TCGGGAGCTGTCCTGGTGGAAGGCAGGTTCGAAGCTTGGCTTGGATaGATGCTTCGTCTGGTCGGAAGACAGACGCTTCCTGGCTTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SGAVLVEGRFEAWLG*MLRLVGRQTLPGLS Trigger: GCTCAAGCCAGGAAGCGTCTGTCTTCCGACCAGACGAAGCATGCATCCAAGCCAAGCTTCGAACCTGCCTTCCACCAGGACAGCTCCCGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS GCA 90 bp | CATCTGAGGCGCAGGACCCTTCACCTGCTTGCTGGAGATGGTCACTaGCGGGGGAGCCGAGTTCAAGGCACTCATGTGAAGAGACTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: HLRRRTLHLLAGDGH*RGSRVQGTHVKRLL Trigger: AAGGAGTCTCTTCACATGAGTGCCTTGAACTCGGCTCCCCCGGCAGTGACCATCTCCAGCAAGCAGGTGAAGGGTCCTGCGCCTCAGATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS CCA 90 bp | GACCTCGGGAGCTGTCCTGGTGGAAGGCAGGTTCGAAGCTTGGCTTaGATGCATGCTTCGTCTGGTCGGAAGACAGACGCTTCCTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: DLGSCPGGRQVRSLA*MHASSGRKTDASWL Trigger: AAGCCAGGAAGCGTCTGTCTTCCGACCAGACGAAGCATGCATCCAAGCCAAGCTTCGAACCTGCCTTCCACCAGGACAGCTCCCGAGGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS-3UTR CAA 90 bp | AAAGCCCCAGCCAACTTACTTAAAACACTTCTTGCCACGGGTCCCGCAGGATGGGGTCCCTGCGTCTCGTaGGGTGAGCGGGTCGATGAG | + |
|
Preference number: 5 (lower is better) Translates to: KAPANLLKTLLATGPAGWGPCVS*GERVDE Trigger: CTCATCGACCCGCTCACCCAACGAGACGCAGGGACC...CCATCCTGCGGGACCCGTGGCAAGAAGTGTTTTAAGTAAGTTGGCTGGGGCTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000095580.3 ENSMUST00000218978.2 |
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| CDS GCA 90 bp | AAACTGGTTTCCGCTAGGGATGGAATAGGCGGCTGTTGGTGGCGCTaGTGGCTCTGCTGGGCTTGGAGGAGCTGGCTCATTTTGGATGGA | + |
|
Preference number: 5 (lower is better) Translates to: KLVSARDGIGGCWWR*WLCWAWRSWLILDG Trigger: TCCATCCAAAATGAGCCAGCTCCTCCAAGCCCAGCAGAGCCAGCAGCGCCACCAACAGCCGCCTATTCCATCCCTAGCGGAAACCAGTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS CCA 90 bp | GTGGCCCTCAGGGACGCCGCTGTTCTGGAGTTTCTCCAGGATCACTaGCGCCTTCTTTACCTCTTTGGCTACCACAGTGAGCTCCAGACT | + |
|
Preference number: 5 (lower is better) Translates to: VALRDAAVLEFLQDH*RLLYLFGYHSELQT Trigger: AGTCTGGAGCTCACTGTGGTAGCCAAAGAGGTAAAGAAGGCGCCAGTGATCCTGGAGAAACTCCAGAACAGCGGCGTCCCTGAGGGCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095580.3 ENSMUST00000218978.2 |
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| CDS-3UTR CAA 90 bp | CTAGCATCCCTAACACACCGGGTGGGGGAGCATGCTAGCTCCCTATCCCCCACCCTTCAAGTTTGGGTTTaGGGGGCTGCTCCTCTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: LASLTHRVGEHASSLSPTLQVWV*GAAPLK Trigger: TTTCAGAGGAGCAGCCCCCAAAACCCAAACTTGAAG...GGTGGGGGATAGGGAGCTAGCATGCTCCCCCACCCGGTGTGTTAGGGATGCTAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS-3UTR CAA 90 bp | CTAGCATCCCTAACACACCGGGTGGGGGAGCATGCTAGCTCCCTATCCCCCACCAAGTGCTTGAGCCTTTaGTCAAAGATGGGCGCGATG | + |
|
Preference number: 5 (lower is better) Translates to: LASLTHRVGEHASSLSPTKCLSL*SKMGAM Trigger: CATCGCGCCCATCTTTGACAAAAGGCTCAAGCACTT...GGTGGGGGATAGGGAGCTAGCATGCTCCCCCACCCGGTGTGTTAGGGATGCTAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS-3UTR CAA 90 bp | CAAGCCGCTGTGACAACCATCCCCGGGGCCATGTTTGGACAGGCTAAGAACGGTAGCACAGGTTGCCCATaGAGTAGCCATGTCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: QAAVTTIPGAMFGQAKNGSTGCP*SSHVSS Trigger: GGAGCTGACATGGCTACTCAATGGGCAACCTGTGCT...ACCGTTCTTAGCCTGTCCAAACATGGCCCCGGGGATGGTTGTCACAGCGGCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS TCA 90 bp | GTCAAGTTTGGGTTTGGCCAGGACCGGAGGGGGCTCCTTGATAGGTaGGGAAGGCTCTGGGATTCTGGCTTCCTGTCCATTGAACCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: VKFGFGQDRRGLLDR*GRLWDSGFLSIEPL Trigger: GAGAGGTTCAATGGACAGGAAGCCAGAATCCCAGAGCCTTCCTCACCTATCAAGGAGCCCCCTCCGGTCCTGGCCAAACCCAAACTTGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS CCA 90 bp | GCTTCCTGTCCATTGAACCTCTCGGGGAAGGAATTCGGTCTAGTCTaGCTGGTATTGGCCGCACCGCTCCCAGAGGATGCCTCCATATCT | + |
|
Preference number: 5 (lower is better) Translates to: ASCPLNLSGKEFGLV*LVLAAPLPEDASIS Trigger: AGATATGGAGGCATCCTCTGGGAGCGGTGCGGCCAATACCAGCCAGACTAGACCGAATTCCTTCCCCGAGAGGTTCAATGGACAGGAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS-3UTR CAA 90 bp | GCTCCCTATCCCCCACCAAAAGCTGTGGTGGTGGTGGTGCGGTGTCTTTGGTTTCTGAAATGGAAAGGGTaGGAGGAGGGCTCAGCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: APYPPPKAVVVVVRCLWFLKWKG*EEGSAR Trigger: TCGAGCTGAGCCCTCCTCCAACCCTTTCCATTTCAG...AAACCAAAGACACCGCACCACCACCACCACAGCTTTTGGTGGGGGATAGGGAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS-3UTR CAA 90 bp | TTTGGAAACCACTGCATACGGTCAGTCGTCTTCCTACCCCTCCACAGTCCACCCCTGGCTCTGCTGGGCTaGGAGGAGCTGGCTCATTTT | + |
|
Preference number: 5 (lower is better) Translates to: FGNHCIRSVVFLPLHSPPLALLG*EELAHF Trigger: AAAATGAGCCAGCTCCTCCAAGCCCAGCAGAGCCAG...GGGTGGACTGTGGAGGGGTAGGAAGACGACTGACCGTATGCAGTGGTTTCCAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS-3UTR CAA 90 bp | ATATTGTCTACTGGCTGGCATCTTGAAGACGCACAGCCCTCAGCCAAGGCTCAAATGGGCGCGATGCACTaGCCCGTGGGGATTTCGTCG | + |
|
Preference number: 5 (lower is better) Translates to: ILSTGWHLEDAQPSAKAQMGAMH*PVGISS Trigger: CGACGAAATCCCCACGGGCAAGTGCATCGCGCCCAT...TTGAGCCTTGGCTGAGGGCTGTGCGTCTTCAAGATGCCAGCCAGTAGACAATAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS-3UTR CAA 90 bp | GCTCCCTATCCCCCACCAAAAGCTGTGGTGGTGGTGGTGCGGTGTCTTTGGTTTGAATTCTGCCCGGTTTaGTTGGTAGCCACGCACGTG | + |
|
Preference number: 5 (lower is better) Translates to: APYPPPKAVVVVVRCLWFEFCPV*LVATHV Trigger: CACGTGCGTGGCTACCAACAAAACCGGGCAGAATTC...AAACCAAAGACACCGCACCACCACCACCACAGCTTTTGGTGGGGGATAGGGAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095580.3 ENSMUST00000218978.2 |
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| CDS CCA 90 bp | TTGATGGCCAGCCTCGCCAGATTGACACTTTCATCTAACTCCTCTTaGCTCAGGAAGGCAGAAAGGTCCGGAAGGTCCTCTGGGCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LMASLARLTLSSNSS*LRKAERSGRSSGPP Trigger: AGGAGGCCCAGAGGACCTTCCGGACCTTTCTGCCTTCCTGAGCCAAGAGGAGTTAGATGAAAGTGTCAATCTGGCGAGGCTGGCCATCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS CCA 90 bp | GAGAGACCCGTAGCGGCTGCCGCTGGGCCGGATAGATATGGGTGTTaGGATTTGCTGGTGCCACTGAGCATATATATCCAACCTAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: ERPVAAAAGPDRYGC*DLLVPLSIYIQPSC Trigger: ACAGCTAGGTTGGATATATATGCTCAGTGGCACCAGCAAATCCCAACACCCATATCTATCCGGCCCAGCGGCAGCCGCTACGGGTCTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095580.3 ENSMUST00000218978.2 |
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| CDS-3UTR CAA 90 bp | TTGAAGACGCACAGCCCTCAGCCAAGGCTCAAAAAGCCCCAGCCAACTTACTTATCTCTGACCAGCATCTaGTGGGAGGCGTCGGGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: LKTHSPQPRLKKPQPTYLSLTSI*WEASGS Trigger: GCTACCCGACGCCTCCCACAAGATGCTGGTCAGAGA...TAAGTAAGTTGGCTGGGGCTTTTTGAGCCTTGGCTGAGGGCTGTGCGTCTTCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS-3UTR CAA 90 bp | GGCTCATTTAATGAATTCACCAGGATGACGGGGATGGATGTAACCCACGAAAGGGGTCCCTGCGTCTCGTaGGGTGAGCGGGTCGATGAG | + |
|
Preference number: 5 (lower is better) Translates to: GSFNEFTRMTGMDVTHERGPCVS*GERVDE Trigger: CTCATCGACCCGCTCACCCAACGAGACGCAGGGACC...CCTTTCGTGGGTTACATCCATCCCCGTCATCCTGGTGAATTCATTAAATGAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095580.3 ENSMUST00000218978.2 |
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| CDS TCA 90 bp | CTCTTTCCTGCATTCTGGACCTTCCTCTGTGAGACAGAGCAGGGCTaGGTCGGCTTCGAATGGGCAAACCCTGTACCATCAAATGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LFPAFWTFLCETEQG*VGFEWANPVPSNGQ Trigger: CTGGCCATTTGATGGTACAGGGTTTGCCCATTCGAAGCCGACTCAGCCCTGCTCTGTCTCACAGAGGAAGGTCCAGAATGCAGGAAAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS TCA 90 bp | TGTAGCGGCTCTTTGTCTCTTTCCTGCATTCTGGACCTTCCTCTGTaGGACAGAGCAGGGCTGAGTCGGCTTCGAATGGGCAAACCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: CSGSLSLSCILDLPL*DRAGLSRLRMGKPC Trigger: ACAGGGTTTGCCCATTCGAAGCCGACTCAGCCCTGCTCTGTCTCACAGAGGAAGGTCCAGAATGCAGGAAAGAGACAAAGAGCCGCTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS TCA 90 bp | CCGCTGGGCCGGATAGATATGGGTGTTGGGATTTGCTGGTGCCACTaGGCATATATATCCAACCTAGCTGTGCACGATACGATGCCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PLGRIDMGVGICWCH*AYISNLAVHDTMPA Trigger: AGCCGGCATCGTATCGTGCACAGCTAGGTTGGATATATATGCTCAGTGGCACCAGCAAATCCCAACACCCATATCTATCCGGCCCAGCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095580.3 ENSMUST00000218978.2 |
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| CDS GCA 90 bp | ATTTTGCAGGTGAAGGTGACTGGTGAGCCTTCGGTAACCCGGAAGTaGTTGAGCCTTTTGTCAAAGATGGGCGCGATGCACTTGCCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: ILQVKVTGEPSVTRK*LSLLSKMGAMHLPV Trigger: CACGGGCAAGTGCATCGCGCCCATCTTTGACAAAAGGCTCAAGCACTTCCGGGTTACCGAAGGCTCACCAGTCACCTTCACCTGCAAAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS CCA 90 bp | TGGAGGAGGGCTCAGCTCGACTTCGCTCGTTGTCCCCACGATGTCTaGTTTCAGCCAGGTAACTTTCTCTCAGGAGTTGAGAGATGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: WRRAQLDFARCPHDV*FQPGNFLSGVERWK Trigger: CTTCCATCTCTCAACTCCTGAGAGAAAGTTACCTGGCTGAAACCAGACATCGTGGGGACAACGAGCGAAGTCGAGCTGAGCCCTCCTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS-3UTR CAA 90 bp | CCCCAGCCAACTTACTTAAAACACTTCTTGCCACGGGTCCCGCAGGATGGAAACTCAGCCACAGCCGGGTaGGTGGTTGAATTTGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: PQPTYLKHFLPRVPQDGNSATAG*VVEFAE Trigger: CTCAGCAAATTCAACCACCAACCCGGCTGTGGCTGA...GTTTCCATCCTGCGGGACCCGTGGCAAGAAGTGTTTTAAGTAAGTTGGCTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS-3UTR CAA 90 bp | TTACCCAGCAGGTCTATTTCAAAGGTGTCCATTAAGCTCGGTACCCATCCAGGCAGGAGCTGGCTCATTTaGGATGGAGAGCCCGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LPSRSISKVSIKLGTHPGRSWLI*DGEPAR Trigger: CCTGGCGGGCTCTCCATCCAAAATGAGCCAGCTCCT...GCCTGGATGGGTACCGAGCTTAATGGACACCTTTGAAATAGACCTGCTGGGTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS-3UTR CAA 90 bp | CAAGCCGCTGTGACAACCATCCCCGGGGCCATGTTTGGACAGGCTAAGAACGGTGTAACCCGGAAGTGCTaGAGCCTTTTGTCAAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: QAAVTTIPGAMFGQAKNGVTRKC*SLLSKM Trigger: CATCTTTGACAAAAGGCTCAAGCACTTCCGGGTTAC...ACCGTTCTTAGCCTGTCCAAACATGGCCCCGGGGATGGTTGTCACAGCGGCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS CCA 90 bp | CTGCCGGGGGAGCCGAGTTCAAGGCACTCATGTGAAGAGACTCCTTaGGTGATGAAGGAGATGTGTTTTGCAGTTGCTGCTGTTCCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: LPGEPSSRHSCEETP*VMKEMCFAVAAVPV Trigger: TACTGGAACAGCAGCAACTGCAAAACACATCTCCTTCATCACCCAAGGAGTCTCTTCACATGAGTGCCTTGAACTCGGCTCCCCCGGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS-3UTR CAA 90 bp | TGGGTATATTGTCTACTGGCTGGCATCTTGAAGACGCACAGCCCTCAGCCAAGGTTGCTCTTGTGGTTTTaGCAGGCCCGAGGTCTGATC | + |
|
Preference number: 5 (lower is better) Translates to: WVYCLLAGILKTHSPQPRLLLWF*QARGLI Trigger: GATCAGACCTCGGGCCTGCAAAAACCACAAGAGCAA...CCTTGGCTGAGGGCTGTGCGTCTTCAAGATGCCAGCCAGTAGACAATATACCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR CAA 90 bp | TGGGTATATTGTCTACTGGCTGGCATCTTGAAGACGCACAGCCCTCAGCCAAGGGATTCCGTCTTGCTCTaGTGGTTTTTGCAGGCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: WVYCLLAGILKTHSPQPRDSVLL*WFLQAR Trigger: TCGGGCCTGCAAAAACCACAAGAGCAAGACGGAATC...CCTTGGCTGAGGGCTGTGCGTCTTCAAGATGCCAGCCAGTAGACAATATACCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS-3UTR CAA 90 bp | CCCCCACCAAAAGCTGTGGTGGTGGTGGTGCGGTGTCTTTGGTTTGGGTATATTCAGCCGGGTTGGTGGTaGAATTTGCTGAGTGAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: PPPKAVVVVVRCLWFGYIQPGWW*NLLSEE Trigger: CTCTTCACTCAGCAAATTCAACCACCAACCCGGCTG...AATATACCCAAACCAAAGACACCGCACCACCACCACCACAGCTTTTGGTGGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS TCA 90 bp | CTCTTGTGGTTTTTGCAGGCCCGAGGTCTGATCCTCTTGGAGCTGTaGGCCTTGAAAAGGGAGGAAAGTTCTTCGATGAAATCGGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LLWFLQARGLILLEL*ALKREESSSMKSAA Trigger: GGCTGCCGATTTCATCGAAGAACTTTCCTCCCTTTTCAAGGCTCACAGCTCCAAGAGGATCAGACCTCGGGCCTGCAAAAACCACAAGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS TCA 90 bp | CCCTTTCACTCTGCACTCAAAGACAACCAGCTGCCCCTCAGAGGCTaGCAAGTTCTGCAGCATCTTCGTAAACACTGGCGCTGCAATGAT | + |
|
Preference number: 5 (lower is better) Translates to: PFHSALKDNQLPLRG*QVLQHLRKHWRCND Trigger: ATCATTGCAGCGCCAGTGTTTACGAAGATGCTGCAGAACTTGTCAGCCTCTGAGGGGCAGCTGGTTGTCTTTGAGTGCAGAGTGAAAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS GCA 90 bp | CATCGCTCTCCACTACACTCCGAGAAGTACAGGAATACAGCATCGTaGTTTCCACGGAGGAGAAGGCAGAAAAGATGTCGAGGCCTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: HRSPLHSEKYRNTAS*FPRRRRQKRCRGLC Trigger: GCAAAGGCCTCGACATCTTTTCTGCCTTCTCCTCCGTGGAAAGCACGATGCTGTATTCCTGTACTTCTCGGAGTGTAGTGGAGAGCGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095580.3 ENSMUST00000218978.2 |
||
| CDS CCA 90 bp | TCTTCGATGAAATCGGCAGCCTTGTTCAGGAAAACTTTCTTGGACTaGGTTTCAGAACTGTACTGCGGCCTCTTGGTCTCTGGCGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SSMKSAALFRKTFLD*VSELYCGLLVSGGL Trigger: CAGCCCGCCAGAGACCAAGAGGCCGCAGTACAGTTCTGAAACCCAGTCCAAGAAAGTTTTCCTGAACAAGGCTGCCGATTTCATCGAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS CCA 90 bp | CACCTTACTTGGGGCGGTGGAATTCCTACCACTATACAATCCAACTaGACTCGGCTGCCTTCCGGAACTTCTCGGCTCCGTAACTTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: HLTWGGGIPTTIQSN*TRLPSGTSRLRNFC Trigger: ACAAAAGTTACGGAGCCGAGAAGTTCCGGAAGGCAGCCGAGTCCAGTTGGATTGTATAGTGGTAGGAATTCCACCGCCCCAAGTAAGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS CCA 90 bp | CAAAGCATGAGTATCGTCCTGTGTCCTCTTCGAAGGCCTCGGCGATaGTCAGTGAGTGAAGGTTTCCTGCCTGCACAATGTGGATATCTG | + |
|
Preference number: 5 (lower is better) Translates to: QSMSIVLCPLRRPRR*SVSEGFLPAQCGYL Trigger: CAGATATCCACATTGTGCAGGCAGGAAACCTTCACTCACTGACCATCGCCGAGGCCTTCGAAGAGGACACAGGACGATACTCATGCTTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS CCA 90 bp | TCGTCTCTCGGATGTAGTCGTCACTCACTGCCTGAGGGGCCTTTGTaGTTTTCTTCATTAGACCCTGGGATGGTACAGATGGTGCGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: SSLGCSRHSLPEGPL*FSSLDPGMVQMVRF Trigger: AAAGCGCACCATCTGTACCATCCCAGGGTCTAATGAAGAAAACCACAAAGGCCCCTCAGGCAGTGAGTGACGACTACATCCGAGAGACGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR CAA 90 bp | CACCAAAAGCTGTGGTGGTGGTGGTGCGGTGTCTTTGGTTTGGGTATATTGTCTCAGACGCTTCCTGGCTaGAGCTTCATCCACTCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: HQKLWWWWCGVFGLGILSQTLPG*SFIHSL Trigger: GAGAGAGTGGATGAAGCTCAAGCCAGGAAGCGTCTG...AGACAATATACCCAAACCAAAGACACCGCACCACCACCACCACAGCTTTTGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR CAA 90 bp | GCTCCCTATCCCCCACCAAAAGCTGTGGTGGTGGTGGTGCGGTGTCTTTGGTTTGAGTTTTCAAGCTCCTaGCCTTCACAATACCACCTT | + |
|
Preference number: 5 (lower is better) Translates to: APYPPPKAVVVVVRCLWFEFSSS*PSQYHL Trigger: AAGGTGGTATTGTGAAGGCAAGGAGCTTGAAAACTC...AAACCAAAGACACCGCACCACCACCACCACAGCTTTTGGTGGGGGATAGGGAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR CAA 90 bp | TGGGTATATTGTCTACTGGCTGGCATCTTGAAGACGCACAGCCCTCAGCCAAGGTCCTGTAGCGGCTCTTaGTCTCTTTCCTGCATTCTG | + |
|
Preference number: 5 (lower is better) Translates to: WVYCLLAGILKTHSPQPRSCSGS*SLSCIL Trigger: CAGAATGCAGGAAAGAGACAAAGAGCCGCTACAGGA...CCTTGGCTGAGGGCTGTGCGTCTTCAAGATGCCAGCCAGTAGACAATATACCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR CAA 90 bp | TCCAATCCAGTTGTTTGGAAACCACTGCATACGGTCAGTCGTCTTCCTACCCCTGAATTCTGCCCGGTTTaGTTGGTAGCCACGCACGTG | + |
|
Preference number: 5 (lower is better) Translates to: SNPVVWKPLHTVSRLPTPEFCPV*LVATHV Trigger: CACGTGCGTGGCTACCAACAAAACCGGGCAGAATTC...AGGGGTAGGAAGACGACTGACCGTATGCAGTGGTTTCCAAACAACTGGATTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095580.3 ENSMUST00000218978.2 |
||
| CDS-3UTR CAA 90 bp | CCCCCACCAAAAGCTGTGGTGGTGGTGGTGCGGTGTCTTTGGTTTGGGTATATTTATGGGTGTTGGGATTaGCTGGTGCCACTGAGCATA | + |
|
Preference number: 5 (lower is better) Translates to: PPPKAVVVVVRCLWFGYIYGCWD*LVPLSI Trigger: TATGCTCAGTGGCACCAGCAAATCCCAACACCCATA...AATATACCCAAACCAAAGACACCGCACCACCACCACCACAGCTTTTGGTGGGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095580.3 ENSMUST00000218978.2 |
||
| CDS TCA 90 bp | TATCGTCCTGTGTCCTCTTCGAAGGCCTCGGCGATGGTCAGTGAGTaGAGGTTTCCTGCCTGCACAATGTGGATATCTGGAGAGTTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: YRPVSSSKASAMVSE*RFPACTMWISGEFS Trigger: TGAAAACTCTCCAGATATCCACATTGTGCAGGCAGGAAACCTTCACTCACTGACCATCGCCGAGGCCTTCGAAGAGGACACAGGACGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR CAA 90 bp | TCCAATCCAGTTGTTTGGAAACCACTGCATACGGTCAGTCGTCTTCCTACCCCTTCGGCTTCCCTCCTCTaGGCTTCTCGCTGTTCAATA | + |
|
Preference number: 5 (lower is better) Translates to: SNPVVWKPLHTVSRLPTPSASLL*ASRCSI Trigger: TATTGAACAGCGAGAAGCCAAGAGGAGGGAAGCCGA...AGGGGTAGGAAGACGACTGACCGTATGCAGTGGTTTCCAAACAACTGGATTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR CAA 90 bp | CCCCCACCAAAAGCTGTGGTGGTGGTGGTGCGGTGTCTTTGGTTTGGGTATATTCGATTCATCTCTTCTTaGTTAGGGTCCCCTTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: PPPKAVVVVVRCLWFGYIRFISS*LGSPSE Trigger: CTCAGAAGGGGACCCTAACAAAGAAGAGATGAATCG...AATATACCCAAACCAAAGACACCGCACCACCACCACCACAGCTTTTGGTGGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR CAA 90 bp | AAAGCCCCAGCCAACTTACTTAAAACACTTCTTGCCACGGGTCCCGCAGGATGGGGTTGGTGGTTGAATTaGCTGAGTGAAGAGCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: KAPANLLKTLLATGPAGWGWWLN*LSEELH Trigger: ATGGAGCTCTTCACTCAGCAAATTCAACCACCAACC...CCATCCTGCGGGACCCGTGGCAAGAAGTGTTTTAAGTAAGTTGGCTGGGGCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR CAA 90 bp | ACCAAAAGCTGTGGTGGTGGTGGTGCGGTGTCTTTGGTTTGGGTATATTGTCTAATGCCGGCTTCGTTCTaGGCTGACAGTGTGTACCAC | + |
|
Preference number: 5 (lower is better) Translates to: TKSCGGGGAVSLVWVYCLMPASF*ADSVYH Trigger: GTGGTACACACTGTCAGCCAAGAACGAAGCCGGCAT...TAGACAATATACCCAAACCAAAGACACCGCACCACCACCACCACAGCTTTTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095580.3 ENSMUST00000218978.2 |
||
| CDS-3UTR CAA 90 bp | GTAACCAGCGGAGTGGGAAATCTGAGTGTCCTAGGAAACCCTCTCCCGTTTTGTACTTTCTCTCAGGAGTaGAGAGATGGAAGTGGATGC | + |
|
Preference number: 5 (lower is better) Translates to: VTSGVGNLSVLGNPLPFCTFSQE*RDGSGC Trigger: GCATCCACTTCCATCTCTCAACTCCTGAGAGAAAGT...ACAAAACGGGAGAGGGTTTCCTAGGACACTCAGATTTCCCACTCCGCTGGTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR CAA 90 bp | CACCAAAAGCTGTGGTGGTGGTGGTGCGGTGTCTTTGGTTTGGGTATATTGTCTACAATACCACCTTACTaGGGGCGGTGGAATTCCTAC | + |
|
Preference number: 5 (lower is better) Translates to: HQKLWWWWCGVFGLGILSTIPPY*GRWNSY Trigger: GTAGGAATTCCACCGCCCCAAGTAAGGTGGTATTGT...AGACAATATACCCAAACCAAAGACACCGCACCACCACCACCACAGCTTTTGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR CAA 90 bp | AAACACTTCTTGCCACGGGTCCCGCAGGATGGAAACTCACTCCAATCCAGTTGTGGTATCCCAACAATTTaGCAGGTGAAGGTGACTGGT | + |
|
Preference number: 5 (lower is better) Translates to: KHFLPRVPQDGNSLQSSCGIPTI*QVKVTG Trigger: ACCAGTCACCTTCACCTGCAAAATTGTTGGGATACC...ACAACTGGATTGGAGTGAGTTTCCATCCTGCGGGACCCGTGGCAAGAAGTGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR CAA 90 bp | ATGGAAACTCACTCCAATCCAGTTGTTTGGAAACCACTGCATACGGTCAGTCGTATGCCGGCTTCGTTCTaGGCTGACAGTGTGTACCAC | + |
|
Preference number: 5 (lower is better) Translates to: METHSNPVVWKPLHTVSRMPASF*ADSVYH Trigger: GTGGTACACACTGTCAGCCAAGAACGAAGCCGGCAT...ACGACTGACCGTATGCAGTGGTTTCCAAACAACTGGATTGGAGTGAGTTTCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095580.3 ENSMUST00000218978.2 |
||
| CDS-3UTR CAA 90 bp | CACCAAAAGCTGTGGTGGTGGTGGTGCGGTGTCTTTGGTTTGGGTATATTGTCTTATGGGTGTTGGGATTaGCTGGTGCCACTGAGCATA | + |
|
Preference number: 5 (lower is better) Translates to: HQKLWWWWCGVFGLGILSYGCWD*LVPLSI Trigger: TATGCTCAGTGGCACCAGCAAATCCCAACACCCATA...AGACAATATACCCAAACCAAAGACACCGCACCACCACCACCACAGCTTTTGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095580.3 ENSMUST00000218978.2 |
||
| CDS-3UTR CAA 90 bp | TGGGTATATTGTCTACTGGCTGGCATCTTGAAGACGCACAGCCCTCAGCCAAGGTTTTCCTGCAGAACTTaGTTTTGGGATTCCGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: WVYCLLAGILKTHSPQPRFSCRT*FWDSVL Trigger: CAAGACGGAATCCCAAAACAAAGTTCTGCAGGAAAA...CCTTGGCTGAGGGCTGTGCGTCTTCAAGATGCCAGCCAGTAGACAATATACCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR CAA 90 bp | CCCCCACCAAAAGCTGTGGTGGTGGTGGTGCGGTGTCTTTGGTTTGGGTATATTTGTCCTCTGAATTGTTaGAGGAGTATTGCTCAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: PPPKAVVVVVRCLWFGYICPLNC*RSIAQG Trigger: ACCTTGAGCAATACTCCTCAAACAATTCAGAGGACA...AATATACCCAAACCAAAGACACCGCACCACCACCACCACAGCTTTTGGTGGGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR CAA 90 bp | GAGTTATTACCCAGCAGGTCTATTTCAAAGGTGTCCATTAAGCTCGGTACCCATGCCAGCCTCGCCAGATaGACACTTTCATCTAACTCC | + |
|
Preference number: 5 (lower is better) Translates to: ELLPSRSISKVSIKLGTHASLAR*TLSSNS Trigger: GGAGTTAGATGAAAGTGTCAATCTGGCGAGGCTGGC...ATGGGTACCGAGCTTAATGGACACCTTTGAAATAGACCTGCTGGGTAATAACTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR CAA 90 bp | GGGTCCCGCAGGATGGAAACTCACTCCAATCCAGTTGTTTGGAAACCACTGCATATGAAATCGGCAGCCTaGTTCAGGAAAACTTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GSRRMETHSNPVVWKPLHMKSAA*FRKTFL Trigger: CAAGAAAGTTTTCCTGAACAAGGCTGCCGATTTCAT...ATGCAGTGGTTTCCAAACAACTGGATTGGAGTGAGTTTCCATCCTGCGGGACCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR CAA 90 bp | CGCAGGATGGAAACTCACTCCAATCCAGTTGTTTGGAAACCACTGCATACGGTCTTTTGGGATTCCGTCTaGCTCTTGTGGTTTTTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: RRMETHSNPVVWKPLHTVFWDSV*LLWFLQ Trigger: CTGCAAAAACCACAAGAGCAAGACGGAATCCCAAAA...GACCGTATGCAGTGGTTTCCAAACAACTGGATTGGAGTGAGTTTCCATCCTGCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR CAA 90 bp | TATCCTAAGGTTGCTAACTTCTCTCAGCCCTCGCTATGGCTCCTAATTGCTCCTGTGAGGACACCTCATTaGGCTTCTGGATTCGATTCA | + |
|
Preference number: 5 (lower is better) Translates to: YPKVANFSQPSLWLLIAPVRTPH*ASGFDS Trigger: TGAATCGAATCCAGAAGCCAAATGAGGTGTCCTCAC...AGGAGCAATTAGGAGCCATAGCGAGGGCTGAGAGAAGTTAGCAACCTTAGGATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR CAA 90 bp | ATGCTAAGCAGGGGCTCATTTAATGAATTCACCAGGATGACGGGGATGGATGTACTGCCTGAGGGGCCTTaGTGGTTTTCTTCATTAGAC | + |
|
Preference number: 5 (lower is better) Translates to: MLSRGSFNEFTRMTGMDVLPEGP*WFSSLD Trigger: GTCTAATGAAGAAAACCACAAAGGCCCCTCAGGCAG...TACATCCATCCCCGTCATCCTGGTGAATTCATTAAATGAGCCCCTGCTTAGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS TCA 90 bp | TCTCCTCTGGTTCTGCCATGGATCGAGGTTTCTTCTGTAAGATCCTaGAGTCGGGAGAGTCTTCTATTAATGTCCCTTCTCTGTACCACT | + |
|
Preference number: 5 (lower is better) Translates to: SPLVLPWIEVSSVRS*SRESLLLMSLLCTT Trigger: AGTGGTACAGAGAAGGGACATTAATAGAAGACTCTCCCGACTTCAGGATCTTACAGAAGAAACCTCGATCCATGGCAGAACCAGAGGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS-3UTR CAA 90 bp | TTGAAGACGCACAGCCCTCAGCCAAGGCTCAAAAAGCCCCAGCCAACTTACTTAAAATCTCAGCGGAAGTaGAATCTGTCCCATAAATGT | + |
|
Preference number: 5 (lower is better) Translates to: LKTHSPQPRLKKPQPTYLKSQRK*NLSHKC Trigger: ACATTTATGGGACAGATTCAACTTCCGCTGAGATTT...TAAGTAAGTTGGCTGGGGCTTTTTGAGCCTTGGCTGAGGGCTGTGCGTCTTCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS TCA 90 bp | TGGCTTCTGGATTCGATTCATCTCTTCTTTGTTAGGGTCCCCTTCTaGGTCAGAGGAAGAGACTCCTTCTATGTAAATCTCAGCGGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: WLLDSIHLFFVRVPF*VRGRDSFYVNLSGS Trigger: ACTTCCGCTGAGATTTACATAGAAGGAGTCTCTTCCTCTGACTCAGAAGGGGACCCTAACAAAGAAGAGATGAATCGAATCCAGAAGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS GCA 90 bp | ATCTCGTTCATCAGCCTCTGCTCAAAGCTGGAAATTTTATATTCCTaGTGGTGTGATCTGACGTCACCGAAATTCACTTTCTTCCCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: ISFISLCSKLEILYS*WCDLTSPKFTFFPK Trigger: CTTGGGGAAGAAAGTGAATTTCGGTGACGTCAGATCACACCAGCAGGAATATAAAATTTCCAGCTTTGAGCAGAGGCTGATGAACGAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS CCA 90 bp | CTTCTATGTAAATCTCAGCGGAAGTTGAATCTGTCCCATAAATGTTaGAAGCAAAGCATGAGTATCGTCCTGTGTCCTCTTCGAAGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LLCKSQRKLNLSHKC*KQSMSIVLCPLRRP Trigger: AGGCCTTCGAAGAGGACACAGGACGATACTCATGCTTTGCTTCCAACATTTATGGGACAGATTCAACTTCCGCTGAGATTTACATAGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS CCA 72 bp | GGCATGCCTATGACCCGGCCCTCCAGTCGCACCGGGTaGCCCTCAGGGACGCCGCTGTTCTGGAGTTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: GMPMTRPSSRTG*PSGTPLFWSFS Trigger: GGAGAAACTCCAGAACAGCGGCGTCCCTGAGGGCCACCCGGTGCGACTGGAGGGCCGGGTCATAGGCATGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095580.3 ENSMUST00000218978.2 |
||
| CDS TCA 72 bp | CTTTCTTCCAGTAGAACACAGGCGGGGGCATGCCTATaGCCCGGCCCTCCAGTCGCACCGGGTGGCCCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: LSSSRTQAGACL*PGPPVAPGGPQ Trigger: CTGAGGGCCACCCGGTGCGACTGGAGGGCCGGGTCATAGGCATGCCCCCGCCTGTGTTCTACTGGAAGAAAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095580.3 ENSMUST00000218978.2 |
||
| CDS CAA 72 bp | GGGAGCTGGATGGGGACACGGTTGCTGTGGAAGTGCTaGAAGCGGGGAAGAAGTGCTTCGGCCGGGCCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: GSWMGTRLLWKC*KRGRSASAGPG Trigger: ACCTGGCCCGGCCGAAGCACTTCTTCCCCGCTTCAAGCACTTCCACAGCAACCGTGTCCCCATCCAGCTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS CAA 90 bp | TGGTGGCGCTGCTGGCTCTGCTGGGCTTGGAGGAGCTGGCTCATTTaGGATGGAGAGCCCGCCAGGAGATCTGCCTTGTGTGGAGGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: WWRCWLCWAWRSWLI*DGEPARRSALCGGV Trigger: CACCCCTCCACACAAGGCAGATCTCCTGGCGGGCTCTCCATCCAAAATGAGCCAGCTCCTCCAAGCCCAGCAGAGCCAGCAGCGCCACCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS CCA 72 bp | TCTGAGGCGCAGGACCCTTCACCTGCTTGCTGGAGATaGTCACTGCCGGGGGAGCCGAGTTCAAGGCACTCA | + |
|
Preference number: 6 (lower is better) Translates to: SEAQDPSPACWR*SLPGEPSSRHS Trigger: TGAGTGCCTTGAACTCGGCTCCCCCGGCAGTGACCATCTCCAGCAAGCAGGTGAAGGGTCCTGCGCCTCAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS TCA 72 bp | GGGAAGAAGTGCTTCGGCCGGGCCAGGTTGAACATCTaGGGCGCAGGACCCTTCACCTGCTTGCTGGAGATG | + |
|
Preference number: 6 (lower is better) Translates to: GKKCFGRARLNI*GAGPFTCLLEM Trigger: CATCTCCAGCAAGCAGGTGAAGGGTCCTGCGCCTCAGATGTTCAACCTGGCCCGGCCGAAGCACTTCTTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS TCA 72 bp | TCTTGTGGGAGGCGTCGGGTAGCACAGGTTGCCCATTaGGTAGCCATGTCAGCTCCGGGGGTGGTAAGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: SCGRRRVAQVAH*VAMSAPGVVSH Trigger: GTGGCTTACCACCCCCGGAGCTGACATGGCTACTCAATGGGCAACCTGTGCTACCCGACGCCTCCCACAAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS GCA 72 bp | CGCAGGACCCTTCACCTGCTTGCTGGAGATGGTCACTaGCGGGGGAGCCGAGTTCAAGGCACTCATGTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: RRTLHLLAGDGH*RGSRVQGTHVK Trigger: CTTCACATGAGTGCCTTGAACTCGGCTCCCCCGGCAGTGACCATCTCCAGCAAGCAGGTGAAGGGTCCTGCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS GCA 72 bp | ACCAGCATCTTGTGGGAGGCGTCGGGTAGCACAGGTTaGCCATTGAGTAGCCATGTCAGCTCCGGGGGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: TSILWEASGSTG*PLSSHVSSGGG Trigger: ACCACCCCCGGAGCTGACATGGCTACTCAATGGGCAACCTGTGCTACCCGACGCCTCCCACAAGATGCTGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS CCA 72 bp | CTGGGTTTCAGAACTGTACTGCGGCCTCTTGGTCTCTaGCGGGCTGTCTTTAGGACTGGCCGGACCTCGGGA | + |
|
Preference number: 6 (lower is better) Translates to: LGFRTVLRPLGL*RAVFRTGRTSG Trigger: TCCCGAGGTCCGGCCAGTCCTAAAGACAGCCCGCCAGAGACCAAGAGGCCGCAGTACAGTTCTGAAACCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS CCA 72 bp | GCTCTGCTGGGCTTGGAGGAGCTGGCTCATTTTGGATaGAGAGCCCGCCAGGAGATCTGCCTTGTGTGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: ALLGLEELAHFG*RARQEICLVWR Trigger: CCTCCACACAAGGCAGATCTCCTGGCGGGCTCTCCATCCAAAATGAGCCAGCTCCTCCAAGCCCAGCAGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS CCA 72 bp | GCTGGCTCTGCTGGGCTTGGAGGAGCTGGCTCATTTTaGATGGAGAGCCCGCCAGGAGATCTGCCTTGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: AGSAGLGGAGSF*MESPPGDLPCV Trigger: CACACAAGGCAGATCTCCTGGCGGGCTCTCCATCCAAAATGAGCCAGCTCCTCCAAGCCCAGCAGAGCCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS CCA 72 bp | GGAATAGGCGGCTGTTGGTGGCGCTGCTGGCTCTGCTaGGCTTGGAGGAGCTGGCTCATTTTGGATGGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: GIGGCWWRCWLC*AWRSWLILDGE Trigger: CTCTCCATCCAAAATGAGCCAGCTCCTCCAAGCCCAGCAGAGCCAGCAGCGCCACCAACAGCCGCCTATTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS CCA 72 bp | GCTAGGGATGGAATAGGCGGCTGTTGGTGGCGCTGCTaGCTCTGCTGGGCTTGGAGGAGCTGGCTCATTTTG | + |
|
Preference number: 6 (lower is better) Translates to: ARDGIGGCWWRC*LCWAWRSWLIL Trigger: CAAAATGAGCCAGCTCCTCCAAGCCCAGCAGAGCCAGCAGCGCCACCAACAGCCGCCTATTCCATCCCTAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS CCA 72 bp | AAACTGGTTTCCGCTAGGGATGGAATAGGCGGCTGTTaGTGGCGCTGCTGGCTCTGCTGGGCTTGGAGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: KLVSARDGIGGC*WRCWLCWAWRS Trigger: GCTCCTCCAAGCCCAGCAGAGCCAGCAGCGCCACCAACAGCCGCCTATTCCATCCCTAGCGGAAACCAGTTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS CAA 90 bp | GGACCTCGGGAGCTGTCCTGGTGGAAGGCAGGTTCGAAGCTTGGCTaGGATGCATGCTTCGTCTGGTCGGAAGACAGACGCTTCCTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: GPRELSWWKAGSKLG*DACFVWSEDRRFLA Trigger: AGCCAGGAAGCGTCTGTCTTCCGACCAGACGAAGCATGCATCCAAGCCAAGCTTCGAACCTGCCTTCCACCAGGACAGCTCCCGAGGTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS TCA 72 bp | GGGTTTGGCCAGGACCGGAGGGGGCTCCTTGATAGGTaGGGAAGGCTCTGGGATTCTGGCTTCCTGTCCATT | + |
|
Preference number: 6 (lower is better) Translates to: GFGQDRRGLLDR*GRLWDSGFLSI Trigger: AATGGACAGGAAGCCAGAATCCCAGAGCCTTCCTCACCTATCAAGGAGCCCCCTCCGGTCCTGGCCAAACCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS GCA 72 bp | GCCTCCATATCTTTGTCGTCTTCCGGTAGGTTGAAGTaGACCCGTAGCCCAATCCTGGAGCTGGACCGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: ASISLSSSGRLK*TRSPILELDRG Trigger: GCCCCGGTCCAGCTCCAGGATTGGGCTACGGGTGCACTTCAACCTACCGGAAGACGACAAAGATATGGAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS CCA 72 bp | CTGTCTTTAGGACTGGCCGGACCTCGGGAGCTGTCCTaGTGGAAGGCAGGTTCGAAGCTTGGCTTGGATGCA | + |
|
Preference number: 6 (lower is better) Translates to: LSLGLAGPRELS*WKAGSKLGLDA Trigger: TGCATCCAAGCCAAGCTTCGAACCTGCCTTCCACCAGGACAGCTCCCGAGGTCCGGCCAGTCCTAAAGACAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS CCA 72 bp | CGTGGTTCAGCTCGTTATCCCTGCTGTCCGCAGGGATaGGAATGGGGACCGATGCTCTCTCTCGCCTTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: RGSARYPCCPQG*EWGPMLSLAFL Trigger: CAGAAAGGCGAGAGAGAGCATCGGTCCCCATTCCCATCCCTGCGGACAGCAGGGATAACGAGCTGAACCACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS CCA 72 bp | CCATTGAACCTCTCGGGGAAGGAATTCGGTCTAGTCTaGCTGGTATTGGCCGCACCGCTCCCAGAGGATGCC | + |
|
Preference number: 6 (lower is better) Translates to: PLNLSGKEFGLV*LVLAAPLPEDA Trigger: GGCATCCTCTGGGAGCGGTGCGGCCAATACCAGCCAGACTAGACCGAATTCCTTCCCCGAGAGGTTCAATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS CAA 72 bp | TGCTGGCTCTGCTGGGCTTGGAGGAGCTGGCTCATTTaGGATGGAGAGCCCGCCAGGAGATCTGCCTTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: CWLCWAWRSWLI*DGEPARRSALC Trigger: ACACAAGGCAGATCTCCTGGCGGGCTCTCCATCCAAAATGAGCCAGCTCCTCCAAGCCCAGCAGAGCCAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS CAA 72 bp | GGTGAGCCTTCGGTAACCCGGAAGTGCTTGAGCCTTTaGTCAAAGATGGGCGCGATGCACTTGCCCGTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: GEPSVTRKCLSL*SKMGAMHLPVG Trigger: CCCCACGGGCAAGTGCATCGCGCCCATCTTTGACAAAAGGCTCAAGCACTTCCGGGTTACCGAAGGCTCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS CAA 72 bp | ATCTTGTGGGAGGCGTCGGGTAGCACAGGTTGCCCATaGAGTAGCCATGTCAGCTCCGGGGGTGGTAAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: ILWEASGSTGCP*SSHVSSGGGKP Trigger: TGGCTTACCACCCCCGGAGCTGACATGGCTACTCAATGGGCAACCTGTGCTACCCGACGCCTCCCACAAGAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS CAA 72 bp | AGCAGAGAGTGGACTCCCGTCTCTCTGACCAGCATCTaGTGGGAGGCGTCGGGTAGCACAGGTTGCCCATTG | + |
|
Preference number: 6 (lower is better) Translates to: SREWTPVSLTSI*WEASGSTGCPL Trigger: CAATGGGCAACCTGTGCTACCCGACGCCTCCCACAAGATGCTGGTCAGAGAGACGGGAGTCCACTCTCTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS CAA 90 bp | GGGTCGATGAGCAGAGAGTGGACTCCCGTCTCTCTGACCAGCATCTaGTGGGAGGCGTCGGGTAGCACAGGTTGCCCATTGAGTAGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: GSMSREWTPVSLTSI*WEASGSTGCPLSSH Trigger: ATGGCTACTCAATGGGCAACCTGTGCTACCCGACGCCTCCCACAAGATGCTGGTCAGAGAGACGGGAGTCCACTCTCTGCTCATCGACCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS CAA 90 bp | TGGCTGGTATTGGCCGCACCGCTCCCAGAGGATGCCTCCATATCTTaGTCGTCTTCCGGTAGGTTGAAGTGCACCCGTAGCCCAATCCTG | + |
|
Preference number: 6 (lower is better) Translates to: WLVLAAPLPEDASIS*SSSGRLKCTRSPIL Trigger: CAGGATTGGGCTACGGGTGCACTTCAACCTACCGGAAGACGACAAAGATATGGAGGCATCCTCTGGGAGCGGTGCGGCCAATACCAGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS CAA 90 bp | TTGCAGGTGAAGGTGACTGGTGAGCCTTCGGTAACCCGGAAGTGCTaGAGCCTTTTGTCAAAGATGGGCGCGATGCACTTGCCCGTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: LQVKVTGEPSVTRKC*SLLSKMGAMHLPVG Trigger: CCCCACGGGCAAGTGCATCGCGCCCATCTTTGACAAAAGGCTCAAGCACTTCCGGGTTACCGAAGGCTCACCAGTCACCTTCACCTGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS CAA 72 bp | GAGCTGTCCTGGTGGAAGGCAGGTTCGAAGCTTGGCTaGGATGCATGCTTCGTCTGGTCGGAAGACAGACGC | + |
|
Preference number: 6 (lower is better) Translates to: ELSWWKAGSKLG*DACFVWSEDRR Trigger: GCGTCTGTCTTCCGACCAGACGAAGCATGCATCCAAGCCAAGCTTCGAACCTGCCTTCCACCAGGACAGCTC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS CAA 72 bp | TTGGCCGCACCGCTCCCAGAGGATGCCTCCATATCTTaGTCGTCTTCCGGTAGGTTGAAGTGCACCCGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: LAAPLPEDASIS*SSSGRLKCTRS Trigger: GCTACGGGTGCACTTCAACCTACCGGAAGACGACAAAGATATGGAGGCATCCTCTGGGAGCGGTGCGGCCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS CAA 72 bp | CTCTCGGGGAAGGAATTCGGTCTAGTCTGGCTGGTATaGGCCGCACCGCTCCCAGAGGATGCCTCCATATCT | + |
|
Preference number: 6 (lower is better) Translates to: LSGKEFGLVWLV*AAPLPEDASIS Trigger: AGATATGGAGGCATCCTCTGGGAGCGGTGCGGCCAATACCAGCCAGACTAGACCGAATTCCTTCCCCGAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS CAA 72 bp | TCAAGTTTGGGTTTGGCCAGGACCGGAGGGGGCTCCTaGATAGGTGAGGAAGGCTCTGGGATTCTGGCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: SSLGLARTGGGS*IGEEGSGILAS Trigger: GGAAGCCAGAATCCCAGAGCCTTCCTCACCTATCAAGGAGCCCCCTCCGGTCCTGGCCAAACCCAAACTTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS CAA 90 bp | CTTGGATGCATGCTTCGTCTGGTCGGAAGACAGACGCTTCCTGGCTaGAGCTTCATCCACTCTCTCCAAGGGGTCGTGGTTGATGGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: LGCMLRLVGRQTLPG*SFIHSLQGVVVDGQ Trigger: CTGGCCATCAACCACGACCCCTTGGAGAGAGTGGATGAAGCTCAAGCCAGGAAGCGTCTGTCTTCCGACCAGACGAAGCATGCATCCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS CAA 90 bp | AAGGTGACTGGTGAGCCTTCGGTAACCCGGAAGTGCTTGAGCCTTTaGTCAAAGATGGGCGCGATGCACTTGCCCGTGGGGATTTCGTCG | + |
|
Preference number: 6 (lower is better) Translates to: KVTGEPSVTRKCLSL*SKMGAMHLPVGISS Trigger: CGACGAAATCCCCACGGGCAAGTGCATCGCGCCCATCTTTGACAAAAGGCTCAAGCACTTCCGGGTTACCGAAGGCTCACCAGTCACCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS CAA 90 bp | CCCGTAGCGGCTGCCGCTGGGCCGGATAGATATGGGTGTTGGGATTaGCTGGTGCCACTGAGCATATATATCCAACCTAGCTGTGCACGA | + |
|
Preference number: 6 (lower is better) Translates to: PVAAAAGPDRYGCWD*LVPLSIYIQPSCAR Trigger: TCGTGCACAGCTAGGTTGGATATATATGCTCAGTGGCACCAGCAAATCCCAACACCCATATCTATCCGGCCCAGCGGCAGCCGCTACGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095580.3 ENSMUST00000218978.2 |
||
| CDS TCA 72 bp | TGCTTCGTCTGGTCGGAAGACAGACGCTTCCTGGCTTaGGCTTCATCCACTCTCTCCAAGGGGTCGTGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: CFVWSEDRRFLA*ASSTLSKGSWL Trigger: CAACCACGACCCCTTGGAGAGAGTGGATGAAGCTCAAGCCAGGAAGCGTCTGTCTTCCGACCAGACGAAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS TCA 72 bp | TGTACCACCCAGCGTCGGACTTCTTGGCTGGCTGGATaGGGAGGCAGACATAGCCTGTTGTATCCTGGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: CTTQRRTSWLAG*GGRHSLLYPGA Trigger: TGCACCAGGATACAACAGGCTATGTCTGCCTCCTCATCCAGCCAGCCAAGAAGTCCGACGCTGGGTGGTACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095580.3 ENSMUST00000218978.2 |
||
| CDS GCA 72 bp | TGGTGGAAGGCAGGTTCGAAGCTTGGCTTGGATGCATaGTTCGTCTGGTCGGAAGACAGACGCTTCCTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: WWKAGSKLGLDA*FVWSEDRRFLA Trigger: AGCCAGGAAGCGTCTGTCTTCCGACCAGACGAAGCATGCATCCAAGCCAAGCTTCGAACCTGCCTTCCACCA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS GCA 72 bp | GTCCTGGTGGAAGGCAGGTTCGAAGCTTGGCTTGGATaGATGCTTCGTCTGGTCGGAAGACAGACGCTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: VLVEGRFEAWLG*MLRLVGRQTLP Trigger: AGGAAGCGTCTGTCTTCCGACCAGACGAAGCATGCATCCAAGCCAAGCTTCGAACCTGCCTTCCACCAGGAC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS GCA 72 bp | CTGGCTCATTTTGGATGGAGAGCCCGCCAGGAGATCTaGCTTGTGTGGAGGGGTGGGCCATTAAGAGGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: LAHFGWRARQEI*LVWRGGPLRGF Trigger: AAAGCCTCTTAATGGCCCACCCCTCCACACAAGGCAGATCTCCTGGCGGGCTCTCCATCCAAAATGAGCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS CCA 72 bp | AGCTGTCCTGGTGGAAGGCAGGTTCGAAGCTTGGCTTaGATGCATGCTTCGTCTGGTCGGAAGACAGACGCT | + |
|
Preference number: 6 (lower is better) Translates to: SCPGGRQVRSLA*MHASSGRKTDA Trigger: AGCGTCTGTCTTCCGACCAGACGAAGCATGCATCCAAGCCAAGCTTCGAACCTGCCTTCCACCAGGACAGCT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS CCA 72 bp | TGGGGCGGTGGAATTCCTACCACTATACAATCCAACTaGACTCGGCTGCCTTCCGGAACTTCTCGGCTCCGT | + |
|
Preference number: 6 (lower is better) Translates to: WGGGIPTTIQSN*TRLPSGTSRLR Trigger: ACGGAGCCGAGAAGTTCCGGAAGGCAGCCGAGTCCAGTTGGATTGTATAGTGGTAGGAATTCCACCGCCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS CCA 72 bp | TCCTCTGAAAGAGGCTGTGGGTTGAGTGGGGAAGGCTaGTGCTCAGCCACAGCCGGGTTGGTGGTTGAATTT | + |
|
Preference number: 6 (lower is better) Translates to: SSERGCGLSGEG*CSATAGLVVEF Trigger: AAATTCAACCACCAACCCGGCTGTGGCTGAGCACCAGCCTTCCCCACTCAACCCACAGCCTCTTTCAGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS CAA 90 bp | CCATTGAACCTCTCGGGGAAGGAATTCGGTCTAGTCTGGCTGGTATaGGCCGCACCGCTCCCAGAGGATGCCTCCATATCTTTGTCGTCT | + |
|
Preference number: 6 (lower is better) Translates to: PLNLSGKEFGLVWLV*AAPLPEDASISLSS Trigger: AGACGACAAAGATATGGAGGCATCCTCTGGGAGCGGTGCGGCCAATACCAGCCAGACTAGACCGAATTCCTTCCCCGAGAGGTTCAATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS TCA 72 bp | AGGATGCCTCCATATCTTTGTCGTCTTCCGGTAGGTTaGAGTGCACCCGTAGCCCAATCCTGGAGCTGGACC | + |
|
Preference number: 6 (lower is better) Translates to: RMPPYLCRLPVG*SAPVAQSWSWT Trigger: GGTCCAGCTCCAGGATTGGGCTACGGGTGCACTTCAACCTACCGGAAGACGACAAAGATATGGAGGCATCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS TCA 72 bp | GCATTCTGGACCTTCCTCTGTGAGACAGAGCAGGGCTaGGTCGGCTTCGAATGGGCAAACCCTGTACCATCA | + |
|
Preference number: 6 (lower is better) Translates to: AFWTFLCETEQG*VGFEWANPVPS Trigger: TGATGGTACAGGGTTTGCCCATTCGAAGCCGACTCAGCCCTGCTCTGTCTCACAGAGGAAGGTCCAGAATGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS GCA 72 bp | GTGAAGGTGACTGGTGAGCCTTCGGTAACCCGGAAGTaGTTGAGCCTTTTGTCAAAGATGGGCGCGATGCAC | + |
|
Preference number: 6 (lower is better) Translates to: VKVTGEPSVTRK*LSLLSKMGAMH Trigger: GTGCATCGCGCCCATCTTTGACAAAAGGCTCAAGCACTTCCGGGTTACCGAAGGCTCACCAGTCACCTTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS CCA 72 bp | ATGCATGCTTCGTCTGGTCGGAAGACAGACGCTTCCTaGCTTGAGCTTCATCCACTCTCTCCAAGGGGTCGT | + |
|
Preference number: 6 (lower is better) Translates to: MHASSGRKTDAS*LELHPLSPRGR Trigger: ACGACCCCTTGGAGAGAGTGGATGAAGCTCAAGCCAGGAAGCGTCTGTCTTCCGACCAGACGAAGCATGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS CCA 72 bp | TCAGCTCGTTATCCCTGCTGTCCGCAGGGATGGGAATaGGGACCGATGCTCTCTCTCGCCTTTCTGTTAGAT | + |
|
Preference number: 6 (lower is better) Translates to: SARYPCCPQGWE*GPMLSLAFLLD Trigger: ATCTAACAGAAAGGCGAGAGAGAGCATCGGTCCCCATTCCCATCCCTGCGGACAGCAGGGATAACGAGCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS CCA 72 bp | GTGGGGAAGGCTGGTGCTCAGCCACAGCCGGGTTGGTaGTTGAATTTGCTGAGTGAAGAGCTCCATTATCAC | + |
|
Preference number: 6 (lower is better) Translates to: VGKAGAQPQPGW*LNLLSEELHYH Trigger: GTGATAATGGAGCTCTTCACTCAGCAAATTCAACCACCAACCCGGCTGTGGCTGAGCACCAGCCTTCCCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS CCA 72 bp | AGGGACGCCGCTGTTCTGGAGTTTCTCCAGGATCACTaGCGCCTTCTTTACCTCTTTGGCTACCACAGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: RDAAVLEFLQDH*RLLYLFGYHSE Trigger: CTCACTGTGGTAGCCAAAGAGGTAAAGAAGGCGCCAGTGATCCTGGAGAAACTCCAGAACAGCGGCGTCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095580.3 ENSMUST00000218978.2 |
||
| CDS CAA 72 bp | CACTGGCGCTGCAATGATGGGCTTCCCGTTCAGGCCTaGCAAATAGTTGGTAGGACTCTGACACTGCTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: HWRCNDGLPVQA*QIVGRTLTLLD Trigger: GTCCAGCAGTGTCAGAGTCCTACCAACTATTTGCAAGGCCTGAACGGGAAGCCCATCATTGCAGCGCCAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS CAA 72 bp | GAGGATGCCTCCATATCTTTGTCGTCTTCCGGTAGGTaGAAGTGCACCCGTAGCCCAATCCTGGAGCTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: EDASISLSSSGR*KCTRSPILELD Trigger: GTCCAGCTCCAGGATTGGGCTACGGGTGCACTTCAACCTACCGGAAGACGACAAAGATATGGAGGCATCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS CAA 90 bp | TCCACTCTCTCCAAGGGGTCGTGGTTGATGGCCAGCCTCGCCAGATaGACACTTTCATCTAACTCCTCTTGGCTCAGGAAGGCAGAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: STLSKGSWLMASLAR*TLSSNSSWLRKAER Trigger: CCTTTCTGCCTTCCTGAGCCAAGAGGAGTTAGATGAAAGTGTCAATCTGGCGAGGCTGGCCATCAACCACGACCCCTTGGAGAGAGTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS CAA 90 bp | CTTCGTAAACACTGGCGCTGCAATGATGGGCTTCCCGTTCAGGCCTaGCAAATAGTTGGTAGGACTCTGACACTGCTGGACGGTGGACAC | + |
|
Preference number: 6 (lower is better) Translates to: LRKHWRCNDGLPVQA*QIVGRTLTLLDGGH Trigger: GTGTCCACCGTCCAGCAGTGTCAGAGTCCTACCAACTATTTGCAAGGCCTGAACGGGAAGCCCATCATTGCAGCGCCAGTGTTTACGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS TCA 72 bp | GTGTCCTCTTCGAAGGCCTCGGCGATGGTCAGTGAGTaGAGGTTTCCTGCCTGCACAATGTGGATATCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: VSSSKASAMVSE*RFPACTMWISG Trigger: TCCAGATATCCACATTGTGCAGGCAGGAAACCTTCACTCACTGACCATCGCCGAGGCCTTCGAAGAGGACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS TCA 72 bp | TCCTGTGTCCTCTTCGAAGGCCTCGGCGATGGTCAGTaGGTGAAGGTTTCCTGCCTGCACAATGTGGATATC | + |
|
Preference number: 6 (lower is better) Translates to: SCVLFEGLGDGQ*VKVSCLHNVDI Trigger: GATATCCACATTGTGCAGGCAGGAAACCTTCACTCACTGACCATCGCCGAGGCCTTCGAAGAGGACACAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS TCA 72 bp | TCTGCACTCAAAGACAACCAGCTGCCCCTCAGAGGCTaGCAAGTTCTGCAGCATCTTCGTAAACACTGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: SALKDNQLPLRG*QVLQHLRKHWR Trigger: GCGCCAGTGTTTACGAAGATGCTGCAGAACTTGTCAGCCTCTGAGGGGCAGCTGGTTGTCTTTGAGTGCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS TCA 72 bp | GTCACTGCCGGGGGAGCCGAGTTCAAGGCACTCATGTaGAGAGACTCCTTGGGTGATGAAGGAGATGTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: VTAGGAEFKALM*RDSLGDEGDVF Trigger: AAACACATCTCCTTCATCACCCAAGGAGTCTCTTCACATGAGTGCCTTGAACTCGGCTCCCCCGGCAGTGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS TCA 72 bp | TCTTTGTCTCTTTCCTGCATTCTGGACCTTCCTCTGTaGGACAGAGCAGGGCTGAGTCGGCTTCGAATGGGC | + |
|
Preference number: 6 (lower is better) Translates to: SLSLSCILDLPL*DRAGLSRLRMG Trigger: GCCCATTCGAAGCCGACTCAGCCCTGCTCTGTCTCACAGAGGAAGGTCCAGAATGCAGGAAAGAGACAAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS CCA 72 bp | AGTATCGTCCTGTGTCCTCTTCGAAGGCCTCGGCGATaGTCAGTGAGTGAAGGTTTCCTGCCTGCACAATGT | + |
|
Preference number: 6 (lower is better) Translates to: SIVLCPLRRPRR*SVSEGFLPAQC Trigger: ACATTGTGCAGGCAGGAAACCTTCACTCACTGACCATCGCCGAGGCCTTCGAAGAGGACACAGGACGATACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS CCA 72 bp | GTAGCGGCTGCCGCTGGGCCGGATAGATATGGGTGTTaGGATTTGCTGGTGCCACTGAGCATATATATCCAA | + |
|
Preference number: 6 (lower is better) Translates to: VAAAAGPDRYGC*DLLVPLSIYIQ Trigger: TTGGATATATATGCTCAGTGGCACCAGCAAATCCCAACACCCATATCTATCCGGCCCAGCGGCAGCCGCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095580.3 ENSMUST00000218978.2 |
||
| CDS CAA 72 bp | TCCAAGGGGTCGTGGTTGATGGCCAGCCTCGCCAGATaGACACTTTCATCTAACTCCTCTTGGCTCAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: SKGSWLMASLAR*TLSSNSSWLRK Trigger: CTTCCTGAGCCAAGAGGAGTTAGATGAAAGTGTCAATCTGGCGAGGCTGGCCATCAACCACGACCCCTTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
||
| CDS CAA 72 bp | AAGGTGACTGGTGAGCCTTCGGTAACCCGGAAGTGCTaGAGCCTTTTGTCAAAGATGGGCGCGATGCACTTG | + |
|
Preference number: 6 (lower is better) Translates to: KVTGEPSVTRKC*SLLSKMGAMHL Trigger: CAAGTGCATCGCGCCCATCTTTGACAAAAGGCTCAAGCACTTCCGGGTTACCGAAGGCTCACCAGTCACCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS CAA 72 bp | GCTGCCGCTGGGCCGGATAGATATGGGTGTTGGGATTaGCTGGTGCCACTGAGCATATATATCCAACCTAGC | + |
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Preference number: 6 (lower is better) Translates to: AAAGPDRYGCWD*LVPLSIYIQPS Trigger: GCTAGGTTGGATATATATGCTCAGTGGCACCAGCAAATCCCAACACCCATATCTATCCGGCCCAGCGGCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095580.3 ENSMUST00000218978.2 |
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| CDS CAA 90 bp | TCTTCGTCTCTCGGATGTAGTCGTCACTCACTGCCTGAGGGGCCTTaGTGGTTTTCTTCATTAGACCCTGGGATGGTACAGATGGTGCGC | + |
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Preference number: 6 (lower is better) Translates to: SSSLGCSRHSLPEGP*WFSSLDPGMVQMVR Trigger: GCGCACCATCTGTACCATCCCAGGGTCTAATGAAGAAAACCACAAAGGCCCCTCAGGCAGTGAGTGACGACTACATCCGAGAGACGAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS CAA 90 bp | ACCCGGAAGTGCTTGAGCCTTTTGTCAAAGATGGGCGCGATGCACTaGCCCGTGGGGATTTCGTCGTGTTCTATCTCGTCATCAGATTCG | + |
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Preference number: 6 (lower is better) Translates to: TRKCLSLLSKMGAMH*PVGISSCSISSSDS Trigger: CGAATCTGATGACGAGATAGAACACGACGAAATCCCCACGGGCAAGTGCATCGCGCCCATCTTTGACAAAAGGCTCAAGCACTTCCGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS GCA 72 bp | AAGACAACCAGCTGCCCCTCAGAGGCTGACAAGTTCTaGAGCATCTTCGTAAACACTGGCGCTGCAATGATG | + |
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Preference number: 6 (lower is better) Translates to: KTTSCPSEADKF*SIFVNTGAAMM Trigger: CATCATTGCAGCGCCAGTGTTTACGAAGATGCTGCAGAACTTGTCAGCCTCTGAGGGGCAGCTGGTTGTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS GCA 72 bp | CTGTGCGATGCTAGACACGGTGCCATATTTGTTGCTTaGGGTGCACGTGAAGCATCCCGAGTCTTCCGAAAA | + |
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Preference number: 6 (lower is better) Translates to: LCDARHGAIFVA*GAREASRVFRK Trigger: TTTTCGGAAGACTCGGGATGCTTCACGTGCACCGCAAGCAACAAATATGGCACCGTGTCTAGCATCGCACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS CCA 72 bp | AGCCTCGCCAGATTGACACTTTCATCTAACTCCTCTTaGCTCAGGAAGGCAGAAAGGTCCGGAAGGTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: SLARLTLSSNSS*LRKAERSGRSS Trigger: AGAGGACCTTCCGGACCTTTCTGCCTTCCTGAGCCAAGAGGAGTTAGATGAAAGTGTCAATCTGGCGAGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS CAA 72 bp | TGCTTGAGCCTTTTGTCAAAGATGGGCGCGATGCACTaGCCCGTGGGGATTTCGTCGTGTTCTATCTCGTCA | + |
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Preference number: 6 (lower is better) Translates to: CLSLLSKMGAMH*PVGISSCSISS Trigger: TGACGAGATAGAACACGACGAAATCCCCACGGGCAAGTGCATCGCGCCCATCTTTGACAAAAGGCTCAAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS CAA 90 bp | TCCTTGATAGGTGAGGAAGGCTCTGGGATTCTGGCTTCCTGTCCATaGAACCTCTCGGGGAAGGAATTCGGTCTAGTCTGGCTGGTATTG | + |
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Preference number: 6 (lower is better) Translates to: SLIGEEGSGILASCP*NLSGKEFGLVWLVL Trigger: CAATACCAGCCAGACTAGACCGAATTCCTTCCCCGAGAGGTTCAATGGACAGGAAGCCAGAATCCCAGAGCCTTCCTCACCTATCAAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS CCA 72 bp | GGATGTAGTCGTCACTCACTGCCTGAGGGGCCTTTGTaGTTTTCTTCATTAGACCCTGGGATGGTACAGATG | + |
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Preference number: 6 (lower is better) Translates to: GCSRHSLPEGPL*FSSLDPGMVQM Trigger: CATCTGTACCATCCCAGGGTCTAATGAAGAAAACCACAAAGGCCCCTCAGGCAGTGAGTGACGACTACATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS CCA 72 bp | GCCTTTTGTCAAAGATGGGCGCGATGCACTTGCCCGTaGGGATTTCGTCGTGTTCTATCTCGTCATCAGATT | + |
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Preference number: 6 (lower is better) Translates to: AFCQRWARCTCP*GFRRVLSRHQI Trigger: AATCTGATGACGAGATAGAACACGACGAAATCCCCACGGGCAAGTGCATCGCGCCCATCTTTGACAAAAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS GCA 72 bp | GAATTCCTACCACTATACAATCCAACTGGACTCGGCTaGCTTCCGGAACTTCTCGGCTCCGTAACTTTTGTG | + |
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Preference number: 6 (lower is better) Translates to: EFLPLYNPTGLG*LPELLGSVTFV Trigger: CACAAAAGTTACGGAGCCGAGAAGTTCCGGAAGGCAGCCGAGTCCAGTTGGATTGTATAGTGGTAGGAATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS GCA 72 bp | CCACTACACTCCGAGAAGTACAGGAATACAGCATCGTaGTTTCCACGGAGGAGAAGGCAGAAAAGATGTCGA | + |
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Preference number: 6 (lower is better) Translates to: PLHSEKYRNTAS*FPRRRRQKRCR Trigger: TCGACATCTTTTCTGCCTTCTCCTCCGTGGAAAGCACGATGCTGTATTCCTGTACTTCTCGGAGTGTAGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095580.3 ENSMUST00000218978.2 |
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| CDS CCA 72 bp | CTCCTTGCCTTCACAATACCACCTTACTTGGGGCGGTaGAATTCCTACCACTATACAATCCAACTGGACTCG | + |
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Preference number: 6 (lower is better) Translates to: LLAFTIPPYLGR*NSYHYTIQLDS Trigger: CGAGTCCAGTTGGATTGTATAGTGGTAGGAATTCCACCGCCCCAAGTAAGGTGGTATTGTGAAGGCAAGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS CCA 72 bp | GAGCCGAGTTCAAGGCACTCATGTGAAGAGACTCCTTaGGTGATGAAGGAGATGTGTTTTGCAGTTGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: EPSSRHSCEETP*VMKEMCFAVAA Trigger: AGCAGCAACTGCAAAACACATCTCCTTCATCACCCAAGGAGTCTCTTCACATGAGTGCCTTGAACTCGGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS CAA 72 bp | TCCTGCAGAACTTTGTTTTGGGATTCCGTCTTGCTCTaGTGGTTTTTGCAGGCCCGAGGTCTGATCCTCTTG | + |
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Preference number: 6 (lower is better) Translates to: SCRTLFWDSVLL*WFLQARGLILL Trigger: CAAGAGGATCAGACCTCGGGCCTGCAAAAACCACAAGAGCAAGACGGAATCCCAAAACAAAGTTCTGCAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS CAA 90 bp | GAAAGTTCTTCGATGAAATCGGCAGCCTTGTTCAGGAAAACTTTCTaGGACTGGGTTTCAGAACTGTACTGCGGCCTCTTGGTCTCTGGC | + |
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Preference number: 6 (lower is better) Translates to: ESSSMKSAALFRKTF*DWVSELYCGLLVSG Trigger: GCCAGAGACCAAGAGGCCGCAGTACAGTTCTGAAACCCAGTCCAAGAAAGTTTTCCTGAACAAGGCTGCCGATTTCATCGAAGAACTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS TCA 72 bp | GTGTGGAGGGGTGGGCCATTAAGAGGCTTTCTTTGCTaGCTGTCCTCTGAATTGTTTGAGGAGTATTGCTCA | + |
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Preference number: 6 (lower is better) Translates to: VWRGGPLRGFLC*LSSELFEEYCS Trigger: TGAGCAATACTCCTCAAACAATTCAGAGGACAGTCAGCAAAGAAAGCCTCTTAATGGCCCACCCCTCCACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS TCA 72 bp | CGGATAGATATGGGTGTTGGGATTTGCTGGTGCCACTaGGCATATATATCCAACCTAGCTGTGCACGATACG | + |
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Preference number: 6 (lower is better) Translates to: RIDMGVGICWCH*AYISNLAVHDT Trigger: CGTATCGTGCACAGCTAGGTTGGATATATATGCTCAGTGGCACCAGCAAATCCCAACACCCATATCTATCCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095580.3 ENSMUST00000218978.2 |
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| CDS GCA 72 bp | GCACAATGTGGATATCTGGAGAGTTTTCAAGCTCCTTaGCTTCACAATACCACCTTACTTGGGGCGGTGGAA | + |
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Preference number: 6 (lower is better) Translates to: AQCGYLESFQAP*LHNTTLLGAVE Trigger: TTCCACCGCCCCAAGTAAGGTGGTATTGTGAAGGCAAGGAGCTTGAAAACTCTCCAGATATCCACATTGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS CCA 72 bp | AAATCGGCAGCCTTGTTCAGGAAAACTTTCTTGGACTaGGTTTCAGAACTGTACTGCGGCCTCTTGGTCTCT | + |
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Preference number: 6 (lower is better) Translates to: KSAALFRKTFLD*VSELYCGLLVS Trigger: AGAGACCAAGAGGCCGCAGTACAGTTCTGAAACCCAGTCCAAGAAAGTTTTCCTGAACAAGGCTGCCGATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS CAA 72 bp | TCGATGAAATCGGCAGCCTTGTTCAGGAAAACTTTCTaGGACTGGGTTTCAGAACTGTACTGCGGCCTCTTG | + |
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Preference number: 6 (lower is better) Translates to: SMKSAALFRKTF*DWVSELYCGLL Trigger: CAAGAGGCCGCAGTACAGTTCTGAAACCCAGTCCAAGAAAGTTTTCCTGAACAAGGCTGCCGATTTCATCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS CAA 72 bp | TGCACAATGTGGATATCTGGAGAGTTTTCAAGCTCCTaGCCTTCACAATACCACCTTACTTGGGGCGGTGGA | + |
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Preference number: 6 (lower is better) Translates to: CTMWISGEFSSS*PSQYHLTWGGG Trigger: TCCACCGCCCCAAGTAAGGTGGTATTGTGAAGGCAAGGAGCTTGAAAACTCTCCAGATATCCACATTGTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS TCA 72 bp | GTTCTGCCATGGATCGAGGTTTCTTCTGTAAGATCCTaGAGTCGGGAGAGTCTTCTATTAATGTCCCTTCTC | + |
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Preference number: 6 (lower is better) Translates to: VLPWIEVSSVRS*SRESLLLMSLL Trigger: GAGAAGGGACATTAATAGAAGACTCTCCCGACTTCAGGATCTTACAGAAGAAACCTCGATCCATGGCAGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS CAA 72 bp | ACCTCATTTGGCTTCTGGATTCGATTCATCTCTTCTTaGTTAGGGTCCCCTTCTGAGTCAGAGGAAGAGACT | + |
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Preference number: 6 (lower is better) Translates to: TSFGFWIRFISS*LGSPSESEEET Trigger: AGTCTCTTCCTCTGACTCAGAAGGGGACCCTAACAAAGAAGAGATGAATCGAATCCAGAAGCCAAATGAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS CAA 90 bp | CTGAGTCAGAGGAAGAGACTCCTTCTATGTAAATCTCAGCGGAAGTaGAATCTGTCCCATAAATGTTGGAAGCAAAGCATGAGTATCGTC | + |
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Preference number: 6 (lower is better) Translates to: LSQRKRLLLCKSQRK*NLSHKCWKQSMSIV Trigger: GACGATACTCATGCTTTGCTTCCAACATTTATGGGACAGATTCAACTTCCGCTGAGATTTACATAGAAGGAGTCTCTTCCTCTGACTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS TCA 72 bp | GATTCGATTCATCTCTTCTTTGTTAGGGTCCCCTTCTaGGTCAGAGGAAGAGACTCCTTCTATGTAAATCTC | + |
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Preference number: 6 (lower is better) Translates to: DSIHLFFVRVPF*VRGRDSFYVNL Trigger: GAGATTTACATAGAAGGAGTCTCTTCCTCTGACTCAGAAGGGGACCCTAACAAAGAAGAGATGAATCGAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS CCA 72 bp | AGCCTCTGCTCAAAGCTGGAAATTTTATATTCCTGCTaGTGTGATCTGACGTCACCGAAATTCACTTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: SLCSKLEILYSC*CDLTSPKFTFF Trigger: GAAGAAAGTGAATTTCGGTGACGTCAGATCACACCAGCAGGAATATAAAATTTCCAGCTTTGAGCAGAGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS CAA 72 bp | AAAAGGGAGGAAAGTTCTTCGATGAAATCGGCAGCCTaGTTCAGGAAAACTTTCTTGGACTGGGTTTCAGAA | + |
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Preference number: 6 (lower is better) Translates to: KREESSSMKSAA*FRKTFLDWVSE Trigger: TTCTGAAACCCAGTCCAAGAAAGTTTTCCTGAACAAGGCTGCCGATTTCATCGAAGAACTTTCCTCCCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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| CDS CAA 72 bp | AGGAAGAGACTCCTTCTATGTAAATCTCAGCGGAAGTaGAATCTGTCCCATAAATGTTGGAAGCAAAGCATG | + |
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Preference number: 6 (lower is better) Translates to: RKRLLLCKSQRK*NLSHKCWKQSM Trigger: CATGCTTTGCTTCCAACATTTATGGGACAGATTCAACTTCCGCTGAGATTTACATAGAAGGAGTCTCTTCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095580.3 |
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