Pregenerated sensors for MYOZ3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049173Ensembl transcript IDs: ENSMUST00000056533.9
Found 131 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCAGACGAAAGCCAGCTGGGTCCTAGTAAGTGGGAAGTCATGGGGTaGACGCCTGTCAATCAGCAGTTGGGAGAGGGAGGCAGAAGTATC | + |
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Preference number: 1 (lower is better) Translates to: ADESQLGPSKWEVMG*TPVNQQLGEGGRSI Trigger: GATACTTCTGCCTCCCTCTCCCAACTGCTGATTGACAGGCGTGCACCCCATGACTTCCCACTTACTAGGACCCAGCTGGCTTTCGTCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| 3UTR CCA 90 bp | AATGTGCAGACGAAAGCCAGCTGGGTCCTAGTAAGTGGGAAGTCATaGGGTGCACGCCTGTCAATCAGCAGTTGGGAGAGGGAGGCAGAA | + |
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Preference number: 1 (lower is better) Translates to: NVQTKASWVLVSGKS*GARLSISSWEREAE Trigger: TTCTGCCTCCCTCTCCCAACTGCTGATTGACAGGCGTGCACCCCATGACTTCCCACTTACTAGGACCCAGCTGGCTTTCGTCTGCACATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| 3UTR CCA 90 bp | GGCAGTCAAACTCCACAGAATAAACATGCAGTGCGCTGTGCAGCCTaGCCAAGGGTTCCTGTCAAAAGGAACCCTTCCATCATCAGCCTC | + |
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Preference number: 1 (lower is better) Translates to: GSQTPQNKHAVRCAA*PRVPVKRNPSIISL Trigger: GAGGCTGATGATGGAAGGGTTCCTTTTGACAGGAACCCTTGGCCAGGCTGCACAGCGCACTGCATGTTTATTCTGTGGAGTTTGACTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| 3UTR CCA 90 bp | CAGTCAGCAGGAATGGAGGAGATAGAGGGGAGAAGGCACGTGGTATaGGCCATGCCGGACAGATGCCAGTCACTATTAGCAAAAATCAGG | + |
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Preference number: 1 (lower is better) Translates to: QSAGMEEIEGRRHVV*AMPDRCQSLLAKIR Trigger: CCTGATTTTTGCTAATAGTGACTGGCATCTGTCCGGCATGGCCCATACCACGTGCCTTCTCCCCTCTATCTCCTCCATTCCTGCTGACTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| 3UTR CCA 90 bp | GATGGACCCTTGCTTCTTCAGTCCTGCTCCTCTTGTTCCAGCGAATaGATAGCCACATCTATGGAACAGGGTATGGAGAGAGCCACCAAG | + |
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Preference number: 1 (lower is better) Translates to: DGPLLLQSCSSCSSE*IATSMEQGMERATK Trigger: CTTGGTGGCTCTCTCCATACCCTGTTCCATAGATGTGGCTATCCATTCGCTGGAACAAGAGGAGCAGGACTGAAGAAGCAAGGGTCCATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| 3UTR GCA 90 bp | TCCTACTTTGGGGTGCTGGACCCTACCTTCCAGCATCTTGTTCTCTaGTTGTCAGGTAGATTTCCTTCCAGAGAGTTGCACAAGCCATCC | + |
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Preference number: 1 (lower is better) Translates to: SYFGVLDPTFQHLVL*LSGRFPSRELHKPS Trigger: GGATGGCTTGTGCAACTCTCTGGAAGGAAATCTACCTGACAAGCAGAGAACAAGATGCTGGAAGGTAGGGTCCAGCACCCCAAAGTAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| 3UTR CCA 90 bp | TTCCAGAGAGTTGCACAAGCCATCCAAGCCCTCCTACCAGCCAGATaGTGTTGGTCTTTAGATTATGGAAACTTGGCCTTGACAGCCCCA | + |
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Preference number: 1 (lower is better) Translates to: FQRVAQAIQALLPAR*CWSLDYGNLALTAP Trigger: TGGGGCTGTCAAGGCCAAGTTTCCATAATCTAAAGACCAACACCATCTGGCTGGTAGGAGGGCTTGGATGGCTTGTGCAACTCTCTGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| 3UTR TCA 90 bp | GTCACTTTGCTCTCAGCCTTACAAATCTCCTCTCTATCATGTCCTTaGGACCTGGGTCTGGCACTGTCTAGCATGGAGCATGTTTCCAGA | + |
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Preference number: 1 (lower is better) Translates to: VTLLSALQISSLSCP*DLGLALSSMEHVSR Trigger: TCTGGAAACATGCTCCATGCTAGACAGTGCCAGACCCAGGTCTCAAGGACATGATAGAGAGGAGATTTGTAAGGCTGAGAGCAAAGTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| 3UTR GCA 90 bp | TGTTCAGTGTGTGAAAACGCTTTGCGAGCTGAAGTCGGCCTCATATaGTCACTTTGTAATCCTAGCACTTGGGAAACAGAGGGAAGGCCA | + |
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Preference number: 1 (lower is better) Translates to: CSVCENALRAEVGLI*SLCNPSTWETEGRP Trigger: TGGCCTTCCCTCTGTTTCCCAAGTGCTAGGATTACAAAGTGAGCATATGAGGCCGACTTCAGCTCGCAAAGCGTTTTCACACACTGAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| 3UTR GCA 90 bp | GGAATCCCACCAACTCACTCAGGGTTCTTCTCTTCGAGGTCACTTTaGTCTCAGCCTTACAAATCTCCTCTCTATCATGTCCTTGAGACC | + |
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Preference number: 1 (lower is better) Translates to: GIPPTHSGFFSSRSL*SQPYKSPLYHVLET Trigger: GGTCTCAAGGACATGATAGAGAGGAGATTTGTAAGGCTGAGAGCAAAGTGACCTCGAAGAGAAGAACCCTGAGTGAGTTGGTGGGATTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| 3UTR CCA 90 bp | TGGTGGGCTCTCGTTCCTTCTCTAAGTTCTCTGGTTCAAGTCTTCTaGGAAGTTTCTGGAATCCCACCAACTCACTCAGGGTTCTTCTCT | + |
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Preference number: 1 (lower is better) Translates to: WWALVPSLSSLVQVF*EVSGIPPTHSGFFS Trigger: AGAGAAGAACCCTGAGTGAGTTGGTGGGATTCCAGAAACTTCCCAGAAGACTTGAACCAGAGAACTTAGAGAAGGAACGAGAGCCCACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| 3UTR CCA 90 bp | ACTATTAGCAAAAATCAGGTCAGGAGAAGGAATGAGGTCCTACTTTaGGGTGCTGGACCCTACCTTCCAGCATCTTGTTCTCTGCTTGTC | + |
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Preference number: 1 (lower is better) Translates to: TISKNQVRRRNEVLL*GAGPYLPASCSLLV Trigger: GACAAGCAGAGAACAAGATGCTGGAAGGTAGGGTCCAGCACCCCAAAGTAGGACCTCATTCCTTCTCCTGACCTGATTTTTGCTAATAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| 3UTR CCA 90 bp | CCAAGAGAAAACACCAACTTCGAGGAATTGCAAGATTCAGGCTACTaGTTCCCTGGAACCAGGAAGGGCAGTCAAACTCCACAGAATAAA | + |
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Preference number: 1 (lower is better) Translates to: PRENTNFEELQDSGY*FPGTRKGSQTPQNK Trigger: TTTATTCTGTGGAGTTTGACTGCCCTTCCTGGTTCCAGGGAACCAGTAGCCTGAATCTTGCAATTCCTCGAAGTTGGTGTTTTCTCTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| 3UTR GCA 90 bp | CCTGAATCCTGCATTCTCACAGCCTGCTTTATAAATGGCATCCACTaGAGATCTATTCCAACAGAGCAAACAGGTGGGGCAAGAAATCTA | + |
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Preference number: 1 (lower is better) Translates to: PESCILTACFINGIH*RSIPTEQTGGARNL Trigger: TAGATTTCTTGCCCCACCTGTTTGCTCTGTTGGAATAGATCTGCAGTGGATGCCATTTATAAAGCAGGCTGTGAGAATGCAGGATTCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| 3UTR TCA 90 bp | CCTCTGTCTCTGCTACAACCTCTTCTCTCTCCCACATGCCACACTTaGACTCCCAGATCAACACATACCAAAAACGACCATAATTATATC | + |
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Preference number: 1 (lower is better) Translates to: PLSLLQPLLSPTCHT*TPRSTHTKNDHNYI Trigger: GATATAATTATGGTCGTTTTTGGTATGTGTTGATCTGGGAGTTCAAGTGTGGCATGTGGGAGAGAGAAGAGGTTGTAGCAGAGACAGAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| 3UTR TCA 90 bp | GTCACAGTCCCATCACTTGGGCTAAGATCTGTTCAGAAGGGAGGATaGGATGGTGTCATTACGTGTTCCACTTTGTACCTGTTCTATAAA | + |
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Preference number: 1 (lower is better) Translates to: VTVPSLGLRSVQKGG*DGVITCSTLYLFYK Trigger: TTTATAGAACAGGTACAAAGTGGAACACGTAATGACACCATCTCATCCTCCCTTCTGAACAGATCTTAGCCCAAGTGATGGGACTGTGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| 3UTR CCA 90 bp | AAGACATTGTCACACTTCACTATCAACAGTCACAGTCCCATCACTTaGGCTAAGATCTGTTCAGAAGGGAGGATGAGATGGTGTCATTAC | + |
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Preference number: 1 (lower is better) Translates to: KTLSHFTINSHSPIT*AKICSEGRMRWCHY Trigger: GTAATGACACCATCTCATCCTCCCTTCTGAACAGATCTTAGCCCAAGTGATGGGACTGTGACTGTTGATAGTGAAGTGTGACAATGTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| 3UTR CAA 90 bp | CTGGGCATCAGCTCAGCCAGAGCAATGGGAGCCCTTGATGGACCCTaGCTTCTTCAGTCCTGCTCCTCTTGTTCCAGCGAATGGATAGCC | + |
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Preference number: 2 (lower is better) Translates to: LGISSARAMGALDGP*LLQSCSSCSSEWIA Trigger: GGCTATCCATTCGCTGGAACAAGAGGAGCAGGACTGAAGAAGCAAGGGTCCATCAAGGGCTCCCATTGCTCTGGCTGAGCTGATGCCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| 3UTR-3UTR TCA 90 bp | AATGGAGGAGATAGAGGGGAGAAGGCACGTGGTATGGGCCATGCCGGACAGATGGGTCAGGAGAAGGAATaGGGTCCTACTTTGGGGTGC | + |
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Preference number: 2 (lower is better) Translates to: NGGDRGEKARGMGHAGQMGQEKE*GPTLGC Trigger: GCACCCCAAAGTAGGACCTCATTCCTTCTCCTGACC...CATCTGTCCGGCATGGCCCATACCACGTGCCTTCTCCCCTCTATCTCCTCCATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| 3UTR-3UTR CCA 90 bp | CTGCAGTCAGCAGGAATGGAGGAGATAGAGGGGAGAAGGCACGTGGTATGGGCCTTTATCCCTTCCTGTTaGCAGGCCTTGCCCCTTGTG | + |
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Preference number: 2 (lower is better) Translates to: LQSAGMEEIEGRRHVVWAFIPSC*QALPLV Trigger: CACAAGGGGCAAGGCCTGCCAACAGGAAGGGATAAA...GGCCCATACCACGTGCCTTCTCCCCTCTATCTCCTCCATTCCTGCTGACTGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| 3UTR-3UTR TCA 90 bp | AATGGAGGAGATAGAGGGGAGAAGGCACGTGGTATGGGCCATGCCGGACAGATGTATCCCAGGCCAATCTaGGACTGTGAGTCTAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: NGGDRGEKARGMGHAGQMYPRPI*DCESRA Trigger: TGCCCTAGACTCACAGTCTCAGATTGGCCTGGGATA...CATCTGTCCGGCATGGCCCATACCACGTGCCTTCTCCCCTCTATCTCCTCCATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| 3UTR-3UTR GCA 90 bp | AATCAGGTCAGGAGAAGGAATGAGGTCCTACTTTGGGGTGCTGGACCCTACCTTACATGCAGTGCGCTGTaGAGCCTGGCCAAGGGTTCC | + |
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Preference number: 2 (lower is better) Translates to: NQVRRRNEVLLWGAGPYLTCSAL*SLAKGS Trigger: GGAACCCTTGGCCAGGCTGCACAGCGCACTGCATGT...AAGGTAGGGTCCAGCACCCCAAAGTAGGACCTCATTCCTTCTCCTGACCTGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| 3UTR-3UTR TCA 90 bp | CTACTTTGGGGTGCTGGACCCTACCTTCCAGCATCTTGTTCTCTGCTTGTCAGGAGCCTCCCTCTGACCTaGATCCTGCATTCTCACAGC | + |
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Preference number: 2 (lower is better) Translates to: LLWGAGPYLPASCSLLVRSLPLT*ILHSHS Trigger: GCTGTGAGAATGCAGGATTCAGGTCAGAGGGAGGCT...CCTGACAAGCAGAGAACAAGATGCTGGAAGGTAGGGTCCAGCACCCCAAAGTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| 3UTR-3UTR CCA 90 bp | AATGGAGGAGATAGAGGGGAGAAGGCACGTGGTATGGGCCATGCCGGACAGATGCTGTCAATCAGCAGTTaGGAGAGGGAGGCAGAAGTA | + |
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Preference number: 2 (lower is better) Translates to: NGGDRGEKARGMGHAGQMLSISS*EREAEV Trigger: TACTTCTGCCTCCCTCTCCCAACTGCTGATTGACAG...CATCTGTCCGGCATGGCCCATACCACGTGCCTTCTCCCCTCTATCTCCTCCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| 3UTR-3UTR TCA 90 bp | AATGGAGGAGATAGAGGGGAGAAGGCACGTGGTATGGGCCATGCCGGACAGATGGTTCAGAAGGGAGGATaGGATGGTGTCATTACGTGT | + |
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Preference number: 2 (lower is better) Translates to: NGGDRGEKARGMGHAGQMVQKGG*DGVITC Trigger: ACACGTAATGACACCATCTCATCCTCCCTTCTGAAC...CATCTGTCCGGCATGGCCCATACCACGTGCCTTCTCCCCTCTATCTCCTCCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| 3UTR-3UTR GCA 90 bp | TGCAGTGCGCTGTGCAGCCTGGCCAAGGGTTCCTGTCAAAAGGAACCCTTCCATAAGCTCAGGGCTTTGTaGATGGTAGGCAAGCATTCT | + |
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Preference number: 2 (lower is better) Translates to: CSALCSLAKGSCQKEPFHKLRAL*MVGKHS Trigger: AGAATGCTTGCCTACCATGCACAAAGCCCTGAGCTT...ATGGAAGGGTTCCTTTTGACAGGAACCCTTGGCCAGGCTGCACAGCGCACTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| 3UTR-3UTR TCA 90 bp | TGCAGTGCGCTGTGCAGCCTGGCCAAGGGTTCCTGTCAAAAGGAACCCTTCCATAAGTCAAGACAAGCATaGTGTTTCTTGAGCCTCGAG | + |
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Preference number: 2 (lower is better) Translates to: CSALCSLAKGSCQKEPFHKSRQA*CFLSLE Trigger: CTCGAGGCTCAAGAAACATCATGCTTGTCTTGACTT...ATGGAAGGGTTCCTTTTGACAGGAACCCTTGGCCAGGCTGCACAGCGCACTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| 3UTR-3UTR CCA 90 bp | GGTTCCTGTCAAAAGGAACCCTTCCATCATCAGCCTCCCTCTGACCTGAATCCTCATGTCCTTGAGACCTaGGTCTGGCACTGTCTAGCA | + |
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Preference number: 2 (lower is better) Translates to: GSCQKEPFHHQPPSDLNPHVLET*VWHCLA Trigger: TGCTAGACAGTGCCAGACCCAGGTCTCAAGGACATG...AGGATTCAGGTCAGAGGGAGGCTGATGATGGAAGGGTTCCTTTTGACAGGAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| 3UTR CAA 90 bp | CAGCATCTTGTTCTCTGCTTGTCAGGTAGATTTCCTTCCAGAGAGTaGCACAAGCCATCCAAGCCCTCCTACCAGCCAGATGGTGTTGGT | + |
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Preference number: 2 (lower is better) Translates to: QHLVLCLSGRFPSRE*HKPSKPSYQPDGVG Trigger: ACCAACACCATCTGGCTGGTAGGAGGGCTTGGATGGCTTGTGCAACTCTCTGGAAGGAAATCTACCTGACAAGCAGAGAACAAGATGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| 3UTR CAA 90 bp | TTAGATAACAGCACGTGTAGGGTGGTTCCATTAAAGACCAGGGGTTaGCCTGCAGTCAGCAGGAATGGAGGAGATAGAGGGGAGAAGGCA | + |
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Preference number: 2 (lower is better) Translates to: LDNSTCRVVPLKTRG*PAVSRNGGDRGEKA Trigger: TGCCTTCTCCCCTCTATCTCCTCCATTCCTGCTGACTGCAGGCAAACCCCTGGTCTTTAATGGAACCACCCTACACGTGCTGTTATCTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| 3UTR-3UTR CCA 90 bp | ATCCAAGAGAAAACACCAACTTCGAGGAATTGCAAGATTCAGGCTACTGGTTCCGTAAGTGACAGCTGCTaGAGCCAGGCAGAGGCAGGC | + |
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Preference number: 2 (lower is better) Translates to: IQEKTPTSRNCKIQATGSVSDSC*SQAEAG Trigger: GCCTGCCTCTGCCTGGCTCCAGCAGCTGTCACTTAC...GGAACCAGTAGCCTGAATCTTGCAATTCCTCGAAGTTGGTGTTTTCTCTTGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| 3UTR-3UTR CCA 90 bp | CTACTTTGGGGTGCTGGACCCTACCTTCCAGCATCTTGTTCTCTGCTTGTCAGGCTATGGAACAGGGTATaGAGAGAGCCACCAAGACAT | + |
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Preference number: 2 (lower is better) Translates to: LLWGAGPYLPASCSLLVRLWNRV*REPPRH Trigger: ATGTCTTGGTGGCTCTCTCCATACCCTGTTCCATAG...CCTGACAAGCAGAGAACAAGATGCTGGAAGGTAGGGTCCAGCACCCCAAAGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| 3UTR CAA 90 bp | TACTTTGGGGTGCTGGACCCTACCTTCCAGCATCTTGTTCTCTGCTaGTCAGGTAGATTTCCTTCCAGAGAGTTGCACAAGCCATCCAAG | + |
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Preference number: 2 (lower is better) Translates to: YFGVLDPTFQHLVLC*SGRFPSRELHKPSK Trigger: CTTGGATGGCTTGTGCAACTCTCTGGAAGGAAATCTACCTGACAAGCAGAGAACAAGATGCTGGAAGGTAGGGTCCAGCACCCCAAAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| 3UTR-3UTR TCA 90 bp | AATGGAGGAGATAGAGGGGAGAAGGCACGTGGTATGGGCCATGCCGGACAGATGCTAAATCGCAAAACATaGCACTGTTCCACAATTCCA | + |
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Preference number: 2 (lower is better) Translates to: NGGDRGEKARGMGHAGQMLNRKT*HCSTIP Trigger: TGGAATTGTGGAACAGTGTCATGTTTTGCGATTTAG...CATCTGTCCGGCATGGCCCATACCACGTGCCTTCTCCCCTCTATCTCCTCCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| 3UTR-3UTR GCA 90 bp | GCGCTCTCAAGCCCTTCAAAGACCTATACTTTTCCTTGTCTTACGGGTGGAGAACCCTTGATGGACCCTTaGTTCTTCAGTCCTGCTCCT | + |
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Preference number: 2 (lower is better) Translates to: ALSSPSKTYTFPCLTGGEPLMDP*FFSPAP Trigger: AGGAGCAGGACTGAAGAAGCAAGGGTCCATCAAGGG...TTCTCCACCCGTAAGACAAGGAAAAGTATAGGTCTTTGAAGGGCTTGAGAGCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| 3UTR-3UTR CCA 90 bp | GCGCTCTCAAGCCCTTCAAAGACCTATACTTTTCCTTGTCTTACGGGTGGAGAACAGACGAAAGCCAGCTaGGTCCTAGTAAGTGGGAAG | + |
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Preference number: 2 (lower is better) Translates to: ALSSPSKTYTFPCLTGGEQTKAS*VLVSGK Trigger: CTTCCCACTTACTAGGACCCAGCTGGCTTTCGTCTG...TTCTCCACCCGTAAGACAAGGAAAAGTATAGGTCTTTGAAGGGCTTGAGAGCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| 3UTR CAA 90 bp | GCCCTCCTACCAGCCAGATGGTGTTGGTCTTTAGATTATGGAAACTaGGCCTTGACAGCCCCAAATCCAAGAGAAAACACCAACTTCGAG | + |
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Preference number: 2 (lower is better) Translates to: ALLPARWCWSLDYGN*ALTAPNPRENTNFE Trigger: CTCGAAGTTGGTGTTTTCTCTTGGATTTGGGGCTGTCAAGGCCAAGTTTCCATAATCTAAAGACCAACACCATCTGGCTGGTAGGAGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| 3UTR-3UTR CCA 90 bp | CCTACCTTCCAGCATCTTGTTCTCTGCTTGTCAGGTAGATTTCCTTCCAGAGAGACCCTCTTTCCTTGGTaGGCTCTCGTTCCTTCTCTA | + |
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Preference number: 2 (lower is better) Translates to: PTFQHLVLCLSGRFPSRETLFPW*ALVPSL Trigger: TAGAGAAGGAACGAGAGCCCACCAAGGAAAGAGGGT...CTCTCTGGAAGGAAATCTACCTGACAAGCAGAGAACAAGATGCTGGAAGGTAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| 3UTR-3UTR CCA 90 bp | CCTACCTTCCAGCATCTTGTTCTCTGCTTGTCAGGTAGATTTCCTTCCAGAGAGTGGCACTGTCTAGCATaGAGCATGTTTCCAGAACGT | + |
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Preference number: 2 (lower is better) Translates to: PTFQHLVLCLSGRFPSREWHCLA*SMFPER Trigger: ACGTTCTGGAAACATGCTCCATGCTAGACAGTGCCA...CTCTCTGGAAGGAAATCTACCTGACAAGCAGAGAACAAGATGCTGGAAGGTAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| 3UTR-3UTR CCA 90 bp | ATTACGTGTTCCACTTTGTACCTGTTCTATAAAGGACATCACAGGCTGACATCCCTTGAGACCTGGGTCTaGCACTGTCTAGCATGGAGC | + |
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Preference number: 2 (lower is better) Translates to: ITCSTLYLFYKGHHRLTSLETWV*HCLAWS Trigger: GCTCCATGCTAGACAGTGCCAGACCCAGGTCTCAAG...GGATGTCAGCCTGTGATGTCCTTTATAGAACAGGTACAAAGTGGAACACGTAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| 3UTR-3UTR CCA 90 bp | ATCCAAGAGAAAACACCAACTTCGAGGAATTGCAAGATTCAGGCTACTGGTTCCCACACCCTCTTTCCTTaGTGGGCTCTCGTTCCTTCT | + |
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Preference number: 2 (lower is better) Translates to: IQEKTPTSRNCKIQATGSHTLFP*WALVPS Trigger: AGAAGGAACGAGAGCCCACCAAGGAAAGAGGGTGTG...GGAACCAGTAGCCTGAATCTTGCAATTCCTCGAAGTTGGTGTTTTCTCTTGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| 3UTR-3UTR GCA 90 bp | GGTTCCTGTCAAAAGGAACCCTTCCATCATCAGCCTCCCTCTGACCTGAATCCTATAAATGGCATCCACTaGAGATCTATTCCAACAGAG | + |
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Preference number: 2 (lower is better) Translates to: GSCQKEPFHHQPPSDLNPINGIH*RSIPTE Trigger: CTCTGTTGGAATAGATCTGCAGTGGATGCCATTTAT...AGGATTCAGGTCAGAGGGAGGCTGATGATGGAAGGGTTCCTTTTGACAGGAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| 3UTR CAA 90 bp | CTACCAGCCAGATGGTGTTGGTCTTTAGATTATGGAAACTTGGCCTaGACAGCCCCAAATCCAAGAGAAAACACCAACTTCGAGGAATTG | + |
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Preference number: 2 (lower is better) Translates to: LPARWCWSLDYGNLA*TAPNPRENTNFEEL Trigger: CAATTCCTCGAAGTTGGTGTTTTCTCTTGGATTTGGGGCTGTCAAGGCCAAGTTTCCATAATCTAAAGACCAACACCATCTGGCTGGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| 3UTR-3UTR GCA 90 bp | AGATTATGGAAACTTGGCCTTGACAGCCCCAAATCCAAGAGAAAACACCAACTTTTGCTTCTTCAGTCCTaGTCCTCTTGTTCCAGCGAA | + |
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Preference number: 2 (lower is better) Translates to: RLWKLGLDSPKSKRKHQLLLLQS*SSCSSE Trigger: TTCGCTGGAACAAGAGGAGCAGGACTGAAGAAGCAA...AAGTTGGTGTTTTCTCTTGGATTTGGGGCTGTCAAGGCCAAGTTTCCATAATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| 3UTR-3UTR CCA 90 bp | TGTTCAGAAGGGAGGATGAGATGGTGTCATTACGTGTTCCACTTTGTACCTGTTCTGGTTCAAGTCTTCTaGGAAGTTTCTGGAATCCCA | + |
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Preference number: 2 (lower is better) Translates to: CSEGRMRWCHYVFHFVPVLVQVF*EVSGIP Trigger: TGGGATTCCAGAAACTTCCCAGAAGACTTGAACCAG...AACAGGTACAAAGTGGAACACGTAATGACACCATCTCATCCTCCCTTCTGAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| 3UTR-3UTR GCA 90 bp | AGATTATGGAAACTTGGCCTTGACAGCCCCAAATCCAAGAGAAAACACCAACTTTCTTCGAGGTCACTTTaGTCTCAGCCTTACAAATCT | + |
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Preference number: 2 (lower is better) Translates to: RLWKLGLDSPKSKRKHQLSSRSL*SQPYKS Trigger: AGATTTGTAAGGCTGAGAGCAAAGTGACCTCGAAGA...AAGTTGGTGTTTTCTCTTGGATTTGGGGCTGTCAAGGCCAAGTTTCCATAATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| 3UTR-3UTR CCA 90 bp | TGTTCAGAAGGGAGGATGAGATGGTGTCATTACGTGTTCCACTTTGTACCTGTTCAATCTATACGTAGATaGACTACTACTGAGCATTCT | + |
|
Preference number: 2 (lower is better) Translates to: CSEGRMRWCHYVFHFVPVQSIRR*TTTEHS Trigger: AGAATGCTCAGTAGTAGTCCATCTACGTATAGATTG...AACAGGTACAAAGTGGAACACGTAATGACACCATCTCATCCTCCCTTCTGAACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
||
| 3UTR GCA 72 bp | AGCCAGCTGGGTCCTAGTAAGTGGGAAGTCATGGGGTaGACGCCTGTCAATCAGCAGTTGGGAGAGGGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: SQLGPSKWEVMG*TPVNQQLGEGG Trigger: GCCTCCCTCTCCCAACTGCTGATTGACAGGCGTGCACCCCATGACTTCCCACTTACTAGGACCCAGCTGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
||
| 3UTR TCA 72 bp | CATCATAGGCAGGTGACACGGGCCACCTGGAGTACTTaGTGCCAGCTCCTATCCCAGGCCAATCTGAGACTG | + |
|
Preference number: 3 (lower is better) Translates to: HHRQVTRATWST*CQLLSQANLRL Trigger: CAGTCTCAGATTGGCCTGGGATAGGAGCTGGCATCAAGTACTCCAGGTGGCCCGTGTCACCTGCCTATGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
||
| 3UTR CCA 72 bp | ACGAAAGCCAGCTGGGTCCTAGTAAGTGGGAAGTCATaGGGTGCACGCCTGTCAATCAGCAGTTGGGAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: TKASWVLVSGKS*GARLSISSWER Trigger: CCTCTCCCAACTGCTGATTGACAGGCGTGCACCCCATGACTTCCCACTTACTAGGACCCAGCTGGCTTTCGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
||
| 3UTR CCA 72 bp | GGAATGGAGGAGATAGAGGGGAGAAGGCACGTGGTATaGGCCATGCCGGACAGATGCCAGTCACTATTAGCA | + |
|
Preference number: 3 (lower is better) Translates to: GMEEIEGRRHVV*AMPDRCQSLLA Trigger: TGCTAATAGTGACTGGCATCTGTCCGGCATGGCCCATACCACGTGCCTTCTCCCCTCTATCTCCTCCATTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
||
| 3UTR CCA 72 bp | TTCCAGATTGACTGGGCATCAGCTCAGCCAGAGCAATaGGAGCCCTTGATGGACCCTTGCTTCTTCAGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: FQIDWASAQPEQ*EPLMDPCFFSP Trigger: AGGACTGAAGAAGCAAGGGTCCATCAAGGGCTCCCATTGCTCTGGCTGAGCTGATGCCCAGTCAATCTGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
||
| 3UTR-3UTR CAA 90 bp | CTACTTTGGGGTGCTGGACCCTACCTTCCAGCATCTTGTTCTCTGCTTGTCAGGTCAGTCCTGCTCCTCTaGTTCCAGCGAATGGATAGC | + |
|
Preference number: 3 (lower is better) Translates to: LLWGAGPYLPASCSLLVRSVLLL*FQRMDS Trigger: GCTATCCATTCGCTGGAACAAGAGGAGCAGGACTGA...CCTGACAAGCAGAGAACAAGATGCTGGAAGGTAGGGTCCAGCACCCCAAAGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
||
| 3UTR TCA 72 bp | GGAGTACTTGATGCCAGCTCCTATCCCAGGCCAATCTaGGACTGTGAGTCTAGGGCAGGTTCCAAATCCACA | + |
|
Preference number: 3 (lower is better) Translates to: GVLDASSYPRPI*DCESRAGSKST Trigger: TGTGGATTTGGAACCTGCCCTAGACTCACAGTCTCAGATTGGCCTGGGATAGGAGCTGGCATCAAGTACTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
||
| 3UTR GCA 72 bp | ATGGGAGCCCTTGATGGACCCTTGCTTCTTCAGTCCTaGTCCTCTTGTTCCAGCGAATGGATAGCCACATCT | + |
|
Preference number: 3 (lower is better) Translates to: MGALDGPLLLQS*SSCSSEWIATS Trigger: AGATGTGGCTATCCATTCGCTGGAACAAGAGGAGCAGGACTGAAGAAGCAAGGGTCCATCAAGGGCTCCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
||
| 3UTR GCA 72 bp | GGAAGGGCAGTCAAACTCCACAGAATAAACATGCAGTaGGCTGTGCAGCCTGGCCAAGGGTTCCTGTCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: GRAVKLHRINMQ*AVQPGQGFLSK Trigger: TTTTGACAGGAACCCTTGGCCAGGCTGCACAGCGCACTGCATGTTTATTCTGTGGAGTTTGACTGCCCTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
||
| 3UTR GCA 72 bp | GGGGTGCTGGACCCTACCTTCCAGCATCTTGTTCTCTaGTTGTCAGGTAGATTTCCTTCCAGAGAGTTGCAC | + |
|
Preference number: 3 (lower is better) Translates to: GVLDPTFQHLVL*LSGRFPSRELH Trigger: GTGCAACTCTCTGGAAGGAAATCTACCTGACAAGCAGAGAACAAGATGCTGGAAGGTAGGGTCCAGCACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
||
| 3UTR CCA 72 bp | GGGAAGTCATGGGGTGCACGCCTGTCAATCAGCAGTTaGGAGAGGGAGGCAGAAGTATCAGAGCAAGATTAT | + |
|
Preference number: 3 (lower is better) Translates to: GKSWGARLSISS*EREAEVSEQDY Trigger: ATAATCTTGCTCTGATACTTCTGCCTCCCTCTCCCAACTGCTGATTGACAGGCGTGCACCCCATGACTTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
||
| 3UTR CCA 72 bp | ACTCCACAGAATAAACATGCAGTGCGCTGTGCAGCCTaGCCAAGGGTTCCTGTCAAAAGGAACCCTTCCATC | + |
|
Preference number: 3 (lower is better) Translates to: TPQNKHAVRCAA*PRVPVKRNPSI Trigger: GATGGAAGGGTTCCTTTTGACAGGAACCCTTGGCCAGGCTGCACAGCGCACTGCATGTTTATTCTGTGGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
||
| 3UTR-3UTR CAA 90 bp | GGTTCCTGTCAAAAGGAACCCTTCCATCATCAGCCTCCCTCTGACCTGAATCCTCAGCCAATGAGGCCATaGCTAACTCTGCCCCTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: GSCQKEPFHHQPPSDLNPQPMRP*LTLPLL Trigger: CAAAAGGGGCAGAGTTAGCAATGGCCTCATTGGCTG...AGGATTCAGGTCAGAGGGAGGCTGATGATGGAAGGGTTCCTTTTGACAGGAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
||
| 3UTR CCA 72 bp | GCAAAACATGACACTGTTCCACAATTCCAGATTGACTaGGCATCAGCTCAGCCAGAGCAATGGGAGCCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: AKHDTVPQFQID*ASAQPEQWEPL Trigger: CAAGGGCTCCCATTGCTCTGGCTGAGCTGATGCCCAGTCAATCTGGAATTGTGGAACAGTGTCATGTTTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
||
| 3UTR CCA 72 bp | CAAGCCATCCAAGCCCTCCTACCAGCCAGATGGTGTTaGTCTTTAGATTATGGAAACTTGGCCTTGACAGCC | + |
|
Preference number: 3 (lower is better) Translates to: QAIQALLPARWC*SLDYGNLALTA Trigger: GGCTGTCAAGGCCAAGTTTCCATAATCTAAAGACCAACACCATCTGGCTGGTAGGAGGGCTTGGATGGCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
||
| 3UTR-3UTR CAA 90 bp | GTTCTTCTCTTCGAGGTCACTTTGCTCTCAGCCTTACAAATCTCCTCTCTATCAGGCCACCTGGAGTACTaGATGCCAGCTCCTATCCCA | + |
|
Preference number: 3 (lower is better) Translates to: VLLFEVTLLSALQISSLSGHLEY*MPAPIP Trigger: TGGGATAGGAGCTGGCATCAAGTACTCCAGGTGGCC...TGATAGAGAGGAGATTTGTAAGGCTGAGAGCAAAGTGACCTCGAAGAGAAGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
||
| 3UTR TCA 72 bp | GCAAGCAAGCAAAGTCAAGACAAGCATGATGTTTCTTaGGCCTCGAGCCCAGGGAATTGTAGCTTCAGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: ASKQSQDKHDVS*ASSPGNCSFRL Trigger: CAGCCTGAAGCTACAATTCCCTGGGCTCGAGGCTCAAGAAACATCATGCTTGTCTTGACTTTGCTTGCTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
||
| 3UTR CCA 72 bp | AACACCAACTTCGAGGAATTGCAAGATTCAGGCTACTaGTTCCCTGGAACCAGGAAGGGCAGTCAAACTCCA | + |
|
Preference number: 3 (lower is better) Translates to: NTNFEELQDSGY*FPGTRKGSQTP Trigger: TGGAGTTTGACTGCCCTTCCTGGTTCCAGGGAACCAGTAGCCTGAATCTTGCAATTCCTCGAAGTTGGTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
||
| 3UTR CCA 72 bp | GTTGCACAAGCCATCCAAGCCCTCCTACCAGCCAGATaGTGTTGGTCTTTAGATTATGGAAACTTGGCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: VAQAIQALLPAR*CWSLDYGNLAL Trigger: CAAGGCCAAGTTTCCATAATCTAAAGACCAACACCATCTGGCTGGTAGGAGGGCTTGGATGGCTTGTGCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
||
| 3UTR GCA 72 bp | CCAATGATGACCTCAAATCTGCCTCTATCTCCCAAGTaGTGGGATTTTAGGCGTACCCCACTATGTCTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: PMMTSNLPLSPK*WDFRRTPLCLV Trigger: AACCAGACATAGTGGGGTACGCCTAAAATCCCAGCACTTGGGAGATAGAGGCAGATTTGAGGTCATCATTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
||
| 3UTR CCA 72 bp | CTCGTTCCTTCTCTAAGTTCTCTGGTTCAAGTCTTCTaGGAAGTTTCTGGAATCCCACCAACTCACTCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: LVPSLSSLVQVF*EVSGIPPTHSG Trigger: CCCTGAGTGAGTTGGTGGGATTCCAGAAACTTCCCAGAAGACTTGAACCAGAGAACTTAGAGAAGGAACGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
||
| 3UTR CCA 72 bp | CCTCCTACCAGCCAGATGGTGTTGGTCTTTAGATTATaGAAACTTGGCCTTGACAGCCCCAAATCCAAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: PPTSQMVLVFRL*KLGLDSPKSKR Trigger: TCTCTTGGATTTGGGGCTGTCAAGGCCAAGTTTCCATAATCTAAAGACCAACACCATCTGGCTGGTAGGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
||
| 3UTR CCA 72 bp | AAAAATCAGGTCAGGAGAAGGAATGAGGTCCTACTTTaGGGTGCTGGACCCTACCTTCCAGCATCTTGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: KNQVRRRNEVLL*GAGPYLPASCS Trigger: AGAACAAGATGCTGGAAGGTAGGGTCCAGCACCCCAAAGTAGGACCTCATTCCTTCTCCTGACCTGATTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
||
| 3UTR-3UTR CAA 90 bp | ATTACGTGTTCCACTTTGTACCTGTTCTATAAAGGACATCACAGGCTGACATCCCCTGTCAATCAGCAGTaGGGAGAGGGAGGCAGAAGT | + |
|
Preference number: 3 (lower is better) Translates to: ITCSTLYLFYKGHHRLTSPVNQQ*GEGGRS Trigger: ACTTCTGCCTCCCTCTCCCAACTGCTGATTGACAGG...GGATGTCAGCCTGTGATGTCCTTTATAGAACAGGTACAAAGTGGAACACGTAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
||
| 3UTR TCA 72 bp | CTGCTACAACCTCTTCTCTCTCCCACATGCCACACTTaGACTCCCAGATCAACACATACCAAAAACGACCAT | + |
|
Preference number: 3 (lower is better) Translates to: LLQPLLSPTCHT*TPRSTHTKNDH Trigger: ATGGTCGTTTTTGGTATGTGTTGATCTGGGAGTTCAAGTGTGGCATGTGGGAGAGAGAAGAGGTTGTAGCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
||
| 3UTR TCA 72 bp | CCATCACTTGGGCTAAGATCTGTTCAGAAGGGAGGATaGGATGGTGTCATTACGTGTTCCACTTTGTACCTG | + |
|
Preference number: 3 (lower is better) Translates to: PSLGLRSVQKGG*DGVITCSTLYL Trigger: CAGGTACAAAGTGGAACACGTAATGACACCATCTCATCCTCCCTTCTGAACAGATCTTAGCCCAAGTGATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
||
| 3UTR GCA 72 bp | TGTGAAAACGCTTTGCGAGCTGAAGTCGGCCTCATATaGTCACTTTGTAATCCTAGCACTTGGGAAACAGAG | + |
|
Preference number: 3 (lower is better) Translates to: CENALRAEVGLI*SLCNPSTWETE Trigger: CTCTGTTTCCCAAGTGCTAGGATTACAAAGTGAGCATATGAGGCCGACTTCAGCTCGCAAAGCGTTTTCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
||
| 3UTR CCA 72 bp | ATGATGACCTCAAATCTGCCTCTATCTCCCAAGTGCTaGGATTTTAGGCGTACCCCACTATGTCTGGTTAAC | + |
|
Preference number: 3 (lower is better) Translates to: MMTSNLPLSPKC*DFRRTPLCLVN Trigger: GTTAACCAGACATAGTGGGGTACGCCTAAAATCCCAGCACTTGGGAGATAGAGGCAGATTTGAGGTCATCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
||
| 3UTR CCA 72 bp | TCACACTTCACTATCAACAGTCACAGTCCCATCACTTaGGCTAAGATCTGTTCAGAAGGGAGGATGAGATGG | + |
|
Preference number: 3 (lower is better) Translates to: SHFTINSHSPIT*AKICSEGRMRW Trigger: CCATCTCATCCTCCCTTCTGAACAGATCTTAGCCCAAGTGATGGGACTGTGACTGTTGATAGTGAAGTGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
||
| 3UTR CCA 72 bp | TCTAAGTTCTCTGGTTCAAGTCTTCTGGGAAGTTTCTaGAATCCCACCAACTCACTCAGGGTTCTTCTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: SKFSGSSLLGSF*NPTNSLRVLLF Trigger: GAAGAGAAGAACCCTGAGTGAGTTGGTGGGATTCCAGAAACTTCCCAGAAGACTTGAACCAGAGAACTTAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
||
| 3UTR-3UTR CAA 90 bp | GTTCTTCTCTTCGAGGTCACTTTGCTCTCAGCCTTACAAATCTCCTCTCTATCATCTTTTAAGATAGTCTaGTATAGCCCAGGCTGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: VLLFEVTLLSALQISSLSSFKIV*YSPGWP Trigger: AGGCCAGCCTGGGCTATACAAGACTATCTTAAAAGA...TGATAGAGAGGAGATTTGTAAGGCTGAGAGCAAAGTGACCTCGAAGAGAAGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
||
| 3UTR GCA 72 bp | GCTTTGTGCATGGTAGGCAAGCATTCTACAAACAGCTaGATTCCCAAGTTACTCCTTCCTAATACAACAATC | + |
|
Preference number: 3 (lower is better) Translates to: ALCMVGKHSTNS*IPKLLLPNTTI Trigger: GATTGTTGTATTAGGAAGGAGTAACTTGGGAATGCAGCTGTTTGTAGAATGCTTGCCTACCATGCACAAAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
||
| 3UTR GCA 72 bp | GCTATATCTAATAATGTTCAGTGTGTGAAAACGCTTTaGGAGCTGAAGTCGGCCTCATATGCTCACTTTGTA | + |
|
Preference number: 3 (lower is better) Translates to: AISNNVQCVKTL*ELKSASYAHFV Trigger: TACAAAGTGAGCATATGAGGCCGACTTCAGCTCGCAAAGCGTTTTCACACACTGAACATTATTAGATATAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
||
| 3UTR TCA 72 bp | ACATCTGCTTCGAGGATTAATGAACTCATTGACCTCTaGACTGCTATATCTAATAATGTTCAGTGTGTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: TSASRINELIDL*TAISNNVQCVK Trigger: TTTCACACACTGAACATTATTAGATATAGCAGTTCAGAGGTCAATGAGTTCATTAATCCTCGAAGCAGATGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
||
| CDS-3UTR TCA 90 bp | TGCAGTGCGCTGTGCAGCCTGGCCAAGGGTTCCTGTCAAAAGGAACCCTTCCATCGGGGGATGGGAGTGTaGCTTCTGCTGCCACTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: CSALCSLAKGSCQKEPFHRGMGV*LLLPLE Trigger: CTCGAGTGGCAGCAGAAGTCACACTCCCATCCCCCG...ATGGAAGGGTTCCTTTTGACAGGAACCCTTGGCCAGGCTGCACAGCGCACTGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
||
| CDS-3UTR GCA 90 bp | CTGCCTCTATCTCCCAAGTGCTGGGATTTTAGGCGTACCCCACTATGTCTGGTTTTGCCTGCGCCGCTCTaGCAGCCACTTTCCCTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LPLSPKCWDFRRTPLCLVLPAPL*QPLSLG Trigger: CCCGAGGGAAAGTGGCTGGCAGAGCGGCGCAGGCAA...AACCAGACATAGTGGGGTACGCCTAAAATCCCAGCACTTGGGAGATAGAGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
||
| CDS-3UTR CCA 90 bp | TGCAGTGCGCTGTGCAGCCTGGCCAAGGGTTCCTGTCAAAAGGAACCCTTCCATGATAGTCTCGGGGGATaGGAGTGTGACTTCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CSALCSLAKGSCQKEPFHDSLGG*ECDFCC Trigger: GCAGCAGAAGTCACACTCCCATCCCCCGAGACTATC...ATGGAAGGGTTCCTTTTGACAGGAACCCTTGGCCAGGCTGCACAGCGCACTGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
||
| CDS-3UTR CCA 90 bp | CTACTTTGGGGTGCTGGACCCTACCTTCCAGCATCTTGTTCTCTGCTTGTCAGGATGGCCTCCCTCACGTaGGGTCCTCCAAATGGCACG | + |
|
Preference number: 4 (lower is better) Translates to: LLWGAGPYLPASCSLLVRMASLT*GPPNGT Trigger: CGTGCCATTTGGAGGACCCCACGTGAGGGAGGCCAT...CCTGACAAGCAGAGAACAAGATGCTGGAAGGTAGGGTCCAGCACCCCAAAGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
||
| 3UTR CAA 72 bp | GACTGGGCATCAGCTCAGCCAGAGCAATGGGAGCCCTaGATGGACCCTTGCTTCTTCAGTCCTGCTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: DWASAQPEQWEP*MDPCFFSPAPL Trigger: AAGAGGAGCAGGACTGAAGAAGCAAGGGTCCATCAAGGGCTCCCATTGCTCTGGCTGAGCTGATGCCCAGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
||
| CDS-3UTR CCA 90 bp | AATCAGGTCAGGAGAAGGAATGAGGTCCTACTTTGGGGTGCTGGACCCTACCTTGTTGAACTTCTCCGGTaGGACGCCCTTCAGGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: NQVRRRNEVLLWGAGPYLVELLR*DALQGL Trigger: GAGCCCCTGAAGGGCGTCCCACCGGAGAAGTTCAAC...AAGGTAGGGTCCAGCACCCCAAAGTAGGACCTCATTCCTTCTCCTGACCTGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
||
| CDS-3UTR TCA 90 bp | CTGCCTCTATCTCCCAAGTGCTGGGATTTTAGGCGTACCCCACTATGTCTGGTTAGTCTTGGTAGCTGGTaGACTCCTGCCAAGGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: LPLSPKCWDFRRTPLCLVSLGSW*TPAKGT Trigger: GGTGCCCTTGGCAGGAGTTCACCAGCTACCAAGACT...AACCAGACATAGTGGGGTACGCCTAAAATCCCAGCACTTGGGAGATAGAGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
||
| CDS-3UTR TCA 90 bp | CTACTTTGGGGTGCTGGACCCTACCTTCCAGCATCTTGTTCTCTGCTTGTCAGGGAAGTTCCAAGCCACTaGAGGACTCCGGGACAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLWGAGPYLPASCSLLVREVPSH*RTPGQR Trigger: CCTTTGTCCCGGAGTCCTTCAGTGGCTTGGAACTTC...CCTGACAAGCAGAGAACAAGATGCTGGAAGGTAGGGTCCAGCACCCCAAAGTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
||
| CDS-3UTR CCA 90 bp | CTGCCTCTATCTCCCAAGTGCTGGGATTTTAGGCGTACCCCACTATGTCTGGTTACGTGCGTCTCGGAGTaGTGGTTCTGCTCCTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LPLSPKCWDFRRTPLCLVTCVSE*WFCSSK Trigger: CTTGGAGGAGCAGAACCACCACTCCGAGACGCACGT...AACCAGACATAGTGGGGTACGCCTAAAATCCCAGCACTTGGGAGATAGAGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
||
| CDS-3UTR TCA 90 bp | ATCCAAGAGAAAACACCAACTTCGAGGAATTGCAAGATTCAGGCTACTGGTTCCCGGCGCTGCCTCTTCTaGAAGAGGAGGGATCCGCGG | + |
|
Preference number: 4 (lower is better) Translates to: IQEKTPTSRNCKIQATGSRRCLF*KRRDPR Trigger: CCGCGGATCCCTCCTCTTTCAGAAGAGGCAGCGCCG...GGAACCAGTAGCCTGAATCTTGCAATTCCTCGAAGTTGGTGTTTTCTCTTGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
||
| CDS-3UTR TCA 90 bp | TGTTCAGAAGGGAGGATGAGATGGTGTCATTACGTGTTCCACTTTGTACCTGTTGCCCTTCAGGGGCTCTaGATAGCCTGGTGCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: CSEGRMRWCHYVFHFVPVALQGL*IAWCQG Trigger: GCCCTGGCACCAGGCTATTCAGAGCCCCTGAAGGGC...AACAGGTACAAAGTGGAACACGTAATGACACCATCTCATCCTCCCTTCTGAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
||
| CDS-3UTR TCA 90 bp | AATCAGGTCAGGAGAAGGAATGAGGTCCTACTTTGGGGTGCTGGACCCTACCTTTTCCGGACCCAGCCCTaGGCAACCCTGTTGAAATTG | + |
|
Preference number: 4 (lower is better) Translates to: NQVRRRNEVLLWGAGPYLFRTQP*ATLLKL Trigger: CAATTTCAACAGGGTTGCTCAGGGCTGGGTCCGGAA...AAGGTAGGGTCCAGCACCCCAAAGTAGGACCTCATTCCTTCTCCTGACCTGATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
||
| 3UTR CAA 72 bp | TGGGAAGTCATGGGGTGCACGCCTGTCAATCAGCAGTaGGGAGAGGGAGGCAGAAGTATCAGAGCAAGATTA | + |
|
Preference number: 4 (lower is better) Translates to: WEVMGCTPVNQQ*GEGGRSIRARL Trigger: TAATCTTGCTCTGATACTTCTGCCTCCCTCTCCCAACTGCTGATTGACAGGCGTGCACCCCATGACTTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
||
| CDS-3UTR GCA 90 bp | AATCAGGTCAGGAGAAGGAATGAGGTCCTACTTTGGGGTGCTGGACCCTACCTTTCAAAGGTAAACTTCTaGACCCGGCGCTGCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NQVRRRNEVLLWGAGPYLSKVNF*TRRCLF Trigger: GAAGAGGCAGCGCCGGGTGCAGAAGTTTACCTTTGA...AAGGTAGGGTCCAGCACCCCAAAGTAGGACCTCATTCCTTCTCCTGACCTGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
||
| CDS-3UTR CCA 90 bp | GAGCTGAAGTCGGCCTCATATGCTCACTTTGTAATCCTAGCACTTGGGAAACAGTTGGGGATGGCCGTGTaGTTGAACTTCTCCGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ELKSASYAHFVILALGKQLGMAV*LNFSGG Trigger: CCCACCGGAGAAGTTCAACCACACGGCCATCCCCAA...CTGTTTCCCAAGTGCTAGGATTACAAAGTGAGCATATGAGGCCGACTTCAGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| CDS-3UTR TCA 90 bp | GGTTCCTGTCAAAAGGAACCCTTCCATCATCAGCCTCCCTCTGACCTGAATCCTTCTATCATTAGGTCCTaGGGCACGCTCAGCTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: GSCQKEPFHHQPPSDLNPSIIRS*GTLSFF Trigger: GAAGAAGCTGAGCGTGCCTCAGGACCTAATGATAGA...AGGATTCAGGTCAGAGGGAGGCTGATGATGGAAGGGTTCCTTTTGACAGGAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| CDS-3UTR GCA 90 bp | ATTACGTGTTCCACTTTGTACCTGTTCTATAAAGGACATCACAGGCTGACATCCTTGGGAACCGTTGCCTaGGCCGCTCTGCCAGCCACT | + |
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Preference number: 4 (lower is better) Translates to: ITCSTLYLFYKGHHRLTSLGTVA*AALPAT Trigger: AGTGGCTGGCAGAGCGGCGCAGGCAACGGTTCCCAA...GGATGTCAGCCTGTGATGTCCTTTATAGAACAGGTACAAAGTGGAACACGTAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| CDS-3UTR GCA 90 bp | TTTCCTTGGTGGGCTCTCGTTCCTTCTCTAAGTTCTCTGGTTCAAGTCTTCTGGTCGGAGTGGTGGTTCTaGTCCTCCAAGCCATTGGGA | + |
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Preference number: 4 (lower is better) Translates to: FPWWALVPSLSSLVQVFWSEWWF*SSKPLG Trigger: TCCCAATGGCTTGGAGGAGCAGAACCACCACTCCGA...CCAGAAGACTTGAACCAGAGAACTTAGAGAAGGAACGAGAGCCCACCAAGGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| CDS-3UTR CCA 90 bp | TGTTCAGAAGGGAGGATGAGATGGTGTCATTACGTGTTCCACTTTGTACCTGTTTGCCTGCGTGGAAAATaGCCTCCCTCACGTGGGGTC | + |
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Preference number: 4 (lower is better) Translates to: CSEGRMRWCHYVFHFVPVCLRGK*PPSRGV Trigger: GACCCCACGTGAGGGAGGCCATTTTCCACGCAGGCA...AACAGGTACAAAGTGGAACACGTAATGACACCATCTCATCCTCCCTTCTGAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| 3UTR CAA 72 bp | GTTCTCTGCTTGTCAGGTAGATTTCCTTCCAGAGAGTaGCACAAGCCATCCAAGCCCTCCTACCAGCCAGAT | + |
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Preference number: 4 (lower is better) Translates to: VLCLSGRFPSRE*HKPSKPSYQPD Trigger: ATCTGGCTGGTAGGAGGGCTTGGATGGCTTGTGCAACTCTCTGGAAGGAAATCTACCTGACAAGCAGAGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| CDS-3UTR CCA 90 bp | AGCCAGATGGTGTTGGTCTTTAGATTATGGAAACTTGGCCTTGACAGCCCCAAAGTGGGGTCCTCCAAATaGCACGGGGGTCTTGTTGAA | + |
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Preference number: 4 (lower is better) Translates to: SQMVLVFRLWKLGLDSPKVGSSK*HGGLVE Trigger: TTCAACAAGACCCCCGTGCCATTTGGAGGACCCCAC...TTTGGGGCTGTCAAGGCCAAGTTTCCATAATCTAAAGACCAACACCATCTGGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| 3UTR CAA 72 bp | GCCCCAAATCCAAGAGAAAACACCAACTTCGAGGAATaGCAAGATTCAGGCTACTGGTTCCCTGGAACCAGG | + |
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Preference number: 4 (lower is better) Translates to: APNPRENTNFEE*QDSGYWFPGTR Trigger: CCTGGTTCCAGGGAACCAGTAGCCTGAATCTTGCAATTCCTCGAAGTTGGTGTTTTCTCTTGGATTTGGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| 3UTR CAA 72 bp | ACAAGCCATCCAAGCCCTCCTACCAGCCAGATGGTGTaGGTCTTTAGATTATGGAAACTTGGCCTTGACAGC | + |
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Preference number: 4 (lower is better) Translates to: TSHPSPPTSQMV*VFRLWKLGLDS Trigger: GCTGTCAAGGCCAAGTTTCCATAATCTAAAGACCAACACCATCTGGCTGGTAGGAGGGCTTGGATGGCTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| 3UTR CAA 72 bp | GTGCTGGACCCTACCTTCCAGCATCTTGTTCTCTGCTaGTCAGGTAGATTTCCTTCCAGAGAGTTGCACAAG | + |
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Preference number: 4 (lower is better) Translates to: VLDPTFQHLVLC*SGRFPSRELHK Trigger: CTTGTGCAACTCTCTGGAAGGAAATCTACCTGACAAGCAGAGAACAAGATGCTGGAAGGTAGGGTCCAGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| 3UTR CAA 72 bp | AAATCGCAAAACATGACACTGTTCCACAATTCCAGATaGACTGGGCATCAGCTCAGCCAGAGCAATGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: KSQNMTLFHNSR*TGHQLSQSNGS Trigger: GCTCCCATTGCTCTGGCTGAGCTGATGCCCAGTCAATCTGGAATTGTGGAACAGTGTCATGTTTTGCGATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| CDS-3UTR GCA 90 bp | ATCCAAGAGAAAACACCAACTTCGAGGAATTGCAAGATTCAGGCTACTGGTTCCCTCGCCAGGATGGCCTaGAAACTTTCTGATAGCTCA | + |
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Preference number: 4 (lower is better) Translates to: IQEKTPTSRNCKIQATGSLARMA*KLSDSS Trigger: TGAGCTATCAGAAAGTTTGCAGGCCATCCTGGCGAG...GGAACCAGTAGCCTGAATCTTGCAATTCCTCGAAGTTGGTGTTTTCTCTTGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| 3UTR CAA 72 bp | CCAGCCAGATGGTGTTGGTCTTTAGATTATGGAAACTaGGCCTTGACAGCCCCAAATCCAAGAGAAAACACC | + |
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Preference number: 4 (lower is better) Translates to: PARWCWSLDYGN*ALTAPNPRENT Trigger: GGTGTTTTCTCTTGGATTTGGGGCTGTCAAGGCCAAGTTTCCATAATCTAAAGACCAACACCATCTGGCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| 3UTR CAA 72 bp | CCAAAAACGACCATAATTATATCACACCCTCTTTCCTaGGTGGGCTCTCGTTCCTTCTCTAAGTTCTCTGGT | + |
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Preference number: 4 (lower is better) Translates to: PKTTIIISHPLS*VGSRSFSKFSG Trigger: ACCAGAGAACTTAGAGAAGGAACGAGAGCCCACCAAGGAAAGAGGGTGTGATATAATTATGGTCGTTTTTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| 3UTR CAA 72 bp | AGATGGTGTTGGTCTTTAGATTATGGAAACTTGGCCTaGACAGCCCCAAATCCAAGAGAAAACACCAACTTC | + |
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Preference number: 4 (lower is better) Translates to: RWCWSLDYGNLA*TAPNPRENTNF Trigger: GAAGTTGGTGTTTTCTCTTGGATTTGGGGCTGTCAAGGCCAAGTTTCCATAATCTAAAGACCAACACCATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| 3UTR CAA 72 bp | TTTGATGCACATCTGCTTCGAGGATTAATGAACTCATaGACCTCTGAACTGCTATATCTAATAATGTTCAGT | + |
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Preference number: 4 (lower is better) Translates to: FDAHLLRGLMNS*TSELLYLIMFS Trigger: ACTGAACATTATTAGATATAGCAGTTCAGAGGTCAATGAGTTCATTAATCCTCGAAGCAGATGTGCATCAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| CDS TCA 90 bp | GGCCGTGTGGTTGAACTTCTCCGGTGGGACGCCCTTCAGGGGCTCTaGATAGCCTGGTGCCAGGGCGCTTGGACTATGGACCGACCCAGT | + |
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Preference number: 5 (lower is better) Translates to: GRVVELLRWDALQGL*IAWCQGAWTMDRPS Trigger: ACTGGGTCGGTCCATAGTCCAAGCGCCCTGGCACCAGGCTATTCAGAGCCCCTGAAGGGCGTCCCACCGGAGAAGTTCAACCACACGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| CDS TCA 90 bp | ACTCCTGCCAAGGGCACCGGTAGCCTTTGGGGATGGCCGTGTGGTTaGACTTCTCCGGTGGGACGCCCTTCAGGGGCTCTGAATAGCCTG | + |
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Preference number: 5 (lower is better) Translates to: TPAKGTGSLWGWPCG*TSPVGRPSGALNSL Trigger: CAGGCTATTCAGAGCCCCTGAAGGGCGTCCCACCGGAGAAGTTCAACCACACGGCCATCCCCAAAGGCTACCGGTGCCCTTGGCAGGAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| CDS TCA 90 bp | TGGGAGTGTGACTTCTGCTGCCACTCGAGTAGTCTTGGTAGCTGGTaGACTCCTGCCAAGGGCACCGGTAGCCTTTGGGGATGGCCGTGT | + |
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Preference number: 5 (lower is better) Translates to: WECDFCCHSSSLGSW*TPAKGTGSLWGWPC Trigger: ACACGGCCATCCCCAAAGGCTACCGGTGCCCTTGGCAGGAGTTCACCAGCTACCAAGACTACTCGAGTGGCAGCAGAAGTCACACTCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| CDS TCA 90 bp | GATCCGCGGTTGTTTCGTAGAGACAGCTCCTCTATCATTAGGTCCTaGGGCACGCTCAGCTTCTTCCCCAGGTCCAGCGAAGGGACTGGT | + |
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Preference number: 5 (lower is better) Translates to: DPRLFRRDSSSIIRS*GTLSFFPRSSEGTG Trigger: ACCAGTCCCTTCGCTGGACCTGGGGAAGAAGCTGAGCGTGCCTCAGGACCTAATGATAGAGGAGCTGTCTCTACGAAACAACCGCGGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| CDS TCA 90 bp | TCTGATAGCTCAAAGGTAAACTTCTGCACCCGGCGCTGCCTCTTCTaGAAGAGGAGGGATCCGCGGTTGTTTCGTAGAGACAGCTCCTCT | + |
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Preference number: 5 (lower is better) Translates to: SDSSKVNFCTRRCLF*KRRDPRLFRRDSSS Trigger: AGAGGAGCTGTCTCTACGAAACAACCGCGGATCCCTCCTCTTTCAGAAGAGGCAGCGCCGGGTGCAGAAGTTTACCTTTGAGCTATCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| CDS-3UTR CAA 90 bp | TGTTCAGAAGGGAGGATGAGATGGTGTCATTACGTGTTCCACTTTGTACCTGTTGCAACCCTGTTGAAATaGGGTCTGAGGCGGAGAAGT | + |
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Preference number: 5 (lower is better) Translates to: CSEGRMRWCHYVFHFVPVATLLK*GLRRRS Trigger: ACTTCTCCGCCTCAGACCCAATTTCAACAGGGTTGC...AACAGGTACAAAGTGGAACACGTAATGACACCATCTCATCCTCCCTTCTGAACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| CDS GCA 72 bp | CCTCCAAGCCATTGGGAACCGTTGCCTGCGCCGCTCTaGCAGCCACTTTCCCTCGGGCACTACTCGCCAGGA | + |
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Preference number: 6 (lower is better) Translates to: PPSHWEPLPAPL*QPLSLGHYSPG Trigger: TCCTGGCGAGTAGTGCCCGAGGGAAAGTGGCTGGCAGAGCGGCGCAGGCAACGGTTCCCAATGGCTTGGAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| CDS CAA 72 bp | CCTTCAGGGGCTCTGAATAGCCTGGTGCCAGGGCGCTaGGACTATGGACCGACCCAGTCCCCGCTGCTCCCA | + |
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Preference number: 6 (lower is better) Translates to: PSGALNSLVPGR*DYGPTQSPLLP Trigger: TGGGAGCAGCGGGGACTGGGTCGGTCCATAGTCCAAGCGCCCTGGCACCAGGCTATTCAGAGCCCCTGAAGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| CDS CAA 90 bp | GCGTCTCGGAGTGGTGGTTCTGCTCCTCCAAGCCATTGGGAACCGTaGCCTGCGCCGCTCTGCCAGCCACTTTCCCTCGGGCACTACTCG | + |
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Preference number: 6 (lower is better) Translates to: ASRSGGSAPPSHWEP*PAPLCQPLSLGHYS Trigger: CGAGTAGTGCCCGAGGGAAAGTGGCTGGCAGAGCGGCGCAGGCAACGGTTCCCAATGGCTTGGAGGAGCAGAACCACCACTCCGAGACGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| CDS TCA 72 bp | AAGGGCACCGGTAGCCTTTGGGGATGGCCGTGTGGTTaGACTTCTCCGGTGGGACGCCCTTCAGGGGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: KGTGSLWGWPCG*TSPVGRPSGAL Trigger: CAGAGCCCCTGAAGGGCGTCCCACCGGAGAAGTTCAACCACACGGCCATCCCCAAAGGCTACCGGTGCCCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| CDS CCA 72 bp | GCGTCTCGGAGTGGTGGTTCTGCTCCTCCAAGCCATTaGGAACCGTTGCCTGCGCCGCTCTGCCAGCCACTT | + |
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Preference number: 6 (lower is better) Translates to: ASRSGGSAPPSH*EPLPAPLCQPL Trigger: AAGTGGCTGGCAGAGCGGCGCAGGCAACGGTTCCCAATGGCTTGGAGGAGCAGAACCACCACTCCGAGACGC 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| CDS CAA 72 bp | AGTGGTGGTTCTGCTCCTCCAAGCCATTGGGAACCGTaGCCTGCGCCGCTCTGCCAGCCACTTTCCCTCGGG | + |
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Preference number: 6 (lower is better) Translates to: SGGSAPPSHWEP*PAPLCQPLSLG Trigger: CCCGAGGGAAAGTGGCTGGCAGAGCGGCGCAGGCAACGGTTCCCAATGGCTTGGAGGAGCAGAACCACCACT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| CDS CAA 72 bp | TGCGTCTCGGAGTGGTGGTTCTGCTCCTCCAAGCCATaGGGAACCGTTGCCTGCGCCGCTCTGCCAGCCACT | + |
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Preference number: 6 (lower is better) Translates to: CVSEWWFCSSKP*GTVACAALPAT Trigger: AGTGGCTGGCAGAGCGGCGCAGGCAACGGTTCCCAATGGCTTGGAGGAGCAGAACCACCACTCCGAGACGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| CDS GCA 72 bp | TGGTTCTGCTCCTCCAAGCCATTGGGAACCGTTGCCTaGGCCGCTCTGCCAGCCACTTTCCCTCGGGCACTA | + |
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Preference number: 6 (lower is better) Translates to: WFCSSKPLGTVA*AALPATFPRAL Trigger: TAGTGCCCGAGGGAAAGTGGCTGGCAGAGCGGCGCAGGCAACGGTTCCCAATGGCTTGGAGGAGCAGAACCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| CDS TCA 72 bp | GTTGAACTTCTCCGGTGGGACGCCCTTCAGGGGCTCTaGATAGCCTGGTGCCAGGGCGCTTGGACTATGGAC | + |
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Preference number: 6 (lower is better) Translates to: VELLRWDALQGL*IAWCQGAWTMD Trigger: GTCCATAGTCCAAGCGCCCTGGCACCAGGCTATTCAGAGCCCCTGAAGGGCGTCCCACCGGAGAAGTTCAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| CDS TCA 72 bp | AGCTCCTCAGACTCCGGGAGCTTCCGGACCCAGCCCTaGGCAACCCTGTTGAAATTGGGTCTGAGGCGGAGA | + |
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Preference number: 6 (lower is better) Translates to: SSSDSGSFRTQP*ATLLKLGLRRR Trigger: TCTCCGCCTCAGACCCAATTTCAACAGGGTTGCTCAGGGCTGGGTCCGGAAGCTCCCGGAGTCTGAGGAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| CDS CAA 90 bp | GTCTCGGGGGATGGGAGTGTGACTTCTGCTGCCACTCGAGTAGTCTaGGTAGCTGGTGAACTCCTGCCAAGGGCACCGGTAGCCTTTGGG | + |
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Preference number: 6 (lower is better) Translates to: VSGDGSVTSAATRVV*VAGELLPRAPVAFG Trigger: CCCAAAGGCTACCGGTGCCCTTGGCAGGAGTTCACCAGCTACCAAGACTACTCGAGTGGCAGCAGAAGTCACACTCCCATCCCCCGAGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| CDS TCA 72 bp | GACTTCTGCTGCCACTCGAGTAGTCTTGGTAGCTGGTaGACTCCTGCCAAGGGCACCGGTAGCCTTTGGGGA | + |
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Preference number: 6 (lower is better) Translates to: DFCCHSSSLGSW*TPAKGTGSLWG Trigger: TCCCCAAAGGCTACCGGTGCCCTTGGCAGGAGTTCACCAGCTACCAAGACTACTCGAGTGGCAGCAGAAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| CDS CAA 72 bp | GATGGGAGTGTGACTTCTGCTGCCACTCGAGTAGTCTaGGTAGCTGGTGAACTCCTGCCAAGGGCACCGGTA | + |
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Preference number: 6 (lower is better) Translates to: DGSVTSAATRVV*VAGELLPRAPV Trigger: TACCGGTGCCCTTGGCAGGAGTTCACCAGCTACCAAGACTACTCGAGTGGCAGCAGAAGTCACACTCCCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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| CDS TCA 72 bp | TTGTTTCGTAGAGACAGCTCCTCTATCATTAGGTCCTaGGGCACGCTCAGCTTCTTCCCCAGGTCCAGCGAA | + |
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Preference number: 6 (lower is better) Translates to: LFRRDSSSIIRS*GTLSFFPRSSE Trigger: TTCGCTGGACCTGGGGAAGAAGCTGAGCGTGCCTCAGGACCTAATGATAGAGGAGCTGTCTCTACGAAACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056533.9 |
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