Pregenerated sensors for MYOZ2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028116Ensembl transcript IDs: ENSMUST00000029761.14, ENSMUST00000141588.8
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAAAGCCTCCAGGAGCTCCGGATCGCTGCCAATCGCCTGCTCCCATaGAGACCGGTAGTACTTAGGAACGGCCGTCGTGTTAAACCTTTC | + |
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Preference number: 1 (lower is better) Translates to: QSLQELRIAANRLLP*RPVVLRNGRRVKPF Trigger: GAAAGGTTTAACACGACGGCCGTTCCTAAGTACTACCGGTCTCCATGGGAGCAGGCGATTGGCAGCGATCCGGAGCTCCTGGAGGCTTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141588.8 |
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| 3UTR TCA 90 bp | GATTCATACTGGAAATTTTCAAAGGTGTATTTGTCAGATCTTCTTTaGCGCATCTTAAACAGCCTGGCCCCACGATTACTGAAATGGGAC | + |
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Preference number: 1 (lower is better) Translates to: DSYWKFSKVYLSDLL*RILNSLAPRLLKWD Trigger: GTCCCATTTCAGTAATCGTGGGGCCAGGCTGTTTAAGATGCGTCAAAGAAGATCTGACAAATACACCTTTGAAAATTTCCAGTATGAATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141588.8 |
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| 3UTR-3UTR GCA 90 bp | CTGCTCCCATGGAGACCGGTAGTACTTAGGAACGGCCGTCGTGTTAAACCTTTCGGAGTTGAGGGGCCTTaGTGTGAGCCACCTTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: LLPWRPVVLRNGRRVKPFGVEGP*CEPPSR Trigger: CCTGGAAGGTGGCTCACAGCAAGGCCCCTCAACTCC...GAAAGGTTTAACACGACGGCCGTTCCTAAGTACTACCGGTCTCCATGGGAGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141588.8 |
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| 3UTR-3UTR GCA 90 bp | GCCAATCGCCTGCTCCCATGGAGACCGGTAGTACTTAGGAACGGCCGTCGTGTTAGCCACCTTCCAGGTTaGTTCCATCAACTCTCCCAT | + |
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Preference number: 2 (lower is better) Translates to: ANRLLPWRPVVLRNGRRVSHLPG*FHQLSH Trigger: ATGGGAGAGTTGATGGAAGCAACCTGGAAGGTGGCT...AACACGACGGCCGTTCCTAAGTACTACCGGTCTCCATGGGAGCAGGCGATTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141588.8 |
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| 3UTR-3UTR GCA 90 bp | CTGCTCCCATGGAGACCGGTAGTACTTAGGAACGGCCGTCGTGTTAAACCTTTCATCCAGGTTTCCAGATaGCTCACAAGGTTTCATGAC | + |
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Preference number: 2 (lower is better) Translates to: LLPWRPVVLRNGRRVKPFIQVSR*LTRFHD Trigger: GTCATGAAACCTTGTGAGGCATCTGGAAACCTGGAT...GAAAGGTTTAACACGACGGCCGTTCCTAAGTACTACCGGTCTCCATGGGAGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141588.8 |
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| 3UTR-3UTR CCA 90 bp | ACGGCCGTCGTGTTAAACCTTTCAGGAGGAATTTCCTTCAGTGGTCCAGAATATGATGTTCTCTGGATTTaGGGGGCTTCGTGGATCGGG | + |
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Preference number: 2 (lower is better) Translates to: TAVVLNLSGGISFSGPEYDVLWI*GASWIG Trigger: CCCGATCCACGAAGCCCCCCAAATCCAGAGAACATC...ATATTCTGGACCACTGAAGGAAATTCCTCCTGAAAGGTTTAACACGACGGCCGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141588.8 |
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| 3UTR CAA 90 bp | TGGGACAATTCTTCTATCATGATGTCTCTGGGGATGCTAACTTTTTaGCCCAGGTCCATGCCGTCAACATCCTTTCAACATGACTGCGGT | + |
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Preference number: 2 (lower is better) Translates to: WDNSSIMMSLGMLTF*PRSMPSTSFQHDCG Trigger: ACCGCAGTCATGTTGAAAGGATGTTGACGGCATGGACCTGGGCAAAAAAGTTAGCATCCCCAGAGACATCATGATAGAAGAATTGTCCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141588.8 |
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| 3UTR-3UTR GCA 90 bp | AGACCGGTAGTACTTAGGAACGGCCGTCGTGTTAAACCTTTCAGGAGGAATTTCTCCAGAATATCCTGGTaGGATGTTCTCTGGATTTGG | + |
|
Preference number: 2 (lower is better) Translates to: RPVVLRNGRRVKPFRRNFSRISW*DVLWIW Trigger: CCAAATCCAGAGAACATCGCACCAGGATATTCTGGA...GAAATTCCTCCTGAAAGGTTTAACACGACGGCCGTTCCTAAGTACTACCGGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141588.8 |
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| 3UTR-3UTR GCA 90 bp | ACGCATCTTAAACAGCCTGGCCCCACGATTACTGAAATGGGACAATTCTTCTATTTTTGCCCAGGTCCATaGCGTCAACATCCTTTCAAC | + |
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Preference number: 2 (lower is better) Translates to: THLKQPGPTITEMGQFFYFCPGP*RQHPFN Trigger: GTTGAAAGGATGTTGACGGCATGGACCTGGGCAAAA...ATAGAAGAATTGTCCCATTTCAGTAATCGTGGGGCCAGGCTGTTTAAGATGCGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141588.8 |
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| 3UTR-3UTR CCA 90 bp | ACGGCCGTCGTGTTAAACCTTTCAGGAGGAATTTCCTTCAGTGGTCCAGAATATCCACGATTACTGAAATaGGACAATTCTTCTATCATG | + |
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Preference number: 2 (lower is better) Translates to: TAVVLNLSGGISFSGPEYPRLLK*DNSSIM Trigger: CATGATAGAAGAATTGTCCCATTTCAGTAATCGTGG...ATATTCTGGACCACTGAAGGAAATTCCTCCTGAAAGGTTTAACACGACGGCCGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141588.8 |
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| 3UTR-3UTR TCA 90 bp | TTTGTCAGATCTTCTTTGACGCATCTTAAACAGCCTGGCCCCACGATTACTGAAATGGAAAAGATGATGTaGAATACTACACTCATCCAG | + |
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Preference number: 2 (lower is better) Translates to: FVRSSLTHLKQPGPTITEMEKMM*NTTLIQ Trigger: CTGGATGAGTGTAGTATTTCACATCATCTTTTCCAT...TTCAGTAATCGTGGGGCCAGGCTGTTTAAGATGCGTCAAAGAAGATCTGACAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141588.8 |
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| 3UTR CAA 90 bp | AGATTCATACTGGAAATTTTCAAAGGTGTATTTGTCAGATCTTCTTaGACGCATCTTAAACAGCCTGGCCCCACGATTACTGAAATGGGA | + |
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Preference number: 2 (lower is better) Translates to: RFILEIFKGVFVRSS*THLKQPGPTITEMG Trigger: TCCCATTTCAGTAATCGTGGGGCCAGGCTGTTTAAGATGCGTCAAAGAAGATCTGACAAATACACCTTTGAAAATTTCCAGTATGAATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141588.8 |
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| 3UTR GCA 72 bp | CGTGGATCGGGGGTGTTGGGCGGAGTTGAGGGGCCTTaGTGTGAGCCACCTTCCAGGTTGCTTCCATCAACT | + |
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Preference number: 3 (lower is better) Translates to: RGSGVLGGVEGP*CEPPSRLLPST Trigger: AGTTGATGGAAGCAACCTGGAAGGTGGCTCACAGCAAGGCCCCTCAACTCCGCCCAACACCCCCGATCCACG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141588.8 |
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| 3UTR GCA 72 bp | GTTTTGGGTACAAAGCCTCCAGGAGCTCCGGATCGCTaGCAATCGCCTGCTCCCATGGAGACCGGTAGTACT | + |
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Preference number: 3 (lower is better) Translates to: VLGTKPPGAPDR*QSPAPMETGST Trigger: AGTACTACCGGTCTCCATGGGAGCAGGCGATTGGCAGCGATCCGGAGCTCCTGGAGGCTTTGTACCCAAAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141588.8 |
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| 3UTR-3UTR CAA 90 bp | GCCAATCGCCTGCTCCCATGGAGACCGGTAGTACTTAGGAACGGCCGTCGTGTTGGGATGCTAACTTTTTaGCCCAGGTCCATGCCGTCA | + |
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Preference number: 3 (lower is better) Translates to: ANRLLPWRPVVLRNGRRVGMLTF*PRSMPS Trigger: TGACGGCATGGACCTGGGCAAAAAAGTTAGCATCCC...AACACGACGGCCGTTCCTAAGTACTACCGGTCTCCATGGGAGCAGGCGATTGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141588.8 |
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| 3UTR-3UTR CAA 90 bp | AGACCGGTAGTACTTAGGAACGGCCGTCGTGTTAAACCTTTCAGGAGGAATTTCGGGTGTTGGGCGGAGTaGAGGGGCCTTGCTGTGAGC | + |
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Preference number: 3 (lower is better) Translates to: RPVVLRNGRRVKPFRRNFGCWAE*RGLAVS Trigger: GCTCACAGCAAGGCCCCTCAACTCCGCCCAACACCC...GAAATTCCTCCTGAAAGGTTTAACACGACGGCCGTTCCTAAGTACTACCGGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141588.8 |
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| 3UTR-3UTR CAA 90 bp | CTTGAAAAGTTTTGGGTACAAAGCCTCCAGGAGCTCCGGATCGCTGCCAATCGCGAGCCACCTTCCAGGTaGCTTCCATCAACTCTCCCA | + |
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Preference number: 3 (lower is better) Translates to: LEKFWVQSLQELRIAANREPPSR*LPSTLP Trigger: TGGGAGAGTTGATGGAAGCAACCTGGAAGGTGGCTC...GCGATTGGCAGCGATCCGGAGCTCCTGGAGGCTTTGTACCCAAAACTTTTCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141588.8 |
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| 3UTR GCA 72 bp | GAGTTGAGGGGCCTTGCTGTGAGCCACCTTCCAGGTTaGTTCCATCAACTCTCCCATTCTGCATGGCGATAT | + |
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Preference number: 3 (lower is better) Translates to: ELRGLAVSHLPG*FHQLSHSAWRY Trigger: ATATCGCCATGCAGAATGGGAGAGTTGATGGAAGCAACCTGGAAGGTGGCTCACAGCAAGGCCCCTCAACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141588.8 |
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| 3UTR-3UTR CAA 90 bp | CGGATCGCTGCCAATCGCCTGCTCCCATGGAGACCGGTAGTACTTAGGAACGGCTTTGTCAGATCTTCTTaGACGCATCTTAAACAGCCT | + |
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Preference number: 3 (lower is better) Translates to: RIAANRLLPWRPVVLRNGFVRSS*THLKQP Trigger: AGGCTGTTTAAGATGCGTCAAAGAAGATCTGACAAA...GCCGTTCCTAAGTACTACCGGTCTCCATGGGAGCAGGCGATTGGCAGCGATCCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141588.8 |
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| 3UTR GCA 72 bp | TCTCCCATTCTGCATGGCGATATTGTGATTAATTTGTaGTCTAGATTCATACTGGAAATTTTCAAAGGTGTA | + |
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Preference number: 3 (lower is better) Translates to: SPILHGDIVINL*SRFILEIFKGV Trigger: TACACCTTTGAAAATTTCCAGTATGAATCTAGAGCACAAATTAATCACAATATCGCCATGCAGAATGGGAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141588.8 |
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| CDS-3UTR GCA 90 bp | GGATCGGGGGTGTTGGGCGGAGTTGAGGGGCCTTGCTGTGAGCCACCTTCCAGGGCTTGCTGTTTCCTTTaGTTCACCATGGCACTATGT | + |
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Preference number: 4 (lower is better) Translates to: GSGVLGGVEGPCCEPPSRACCFL*FTMALC Trigger: ACATAGTGCCATGGTGAAGCAAAGGAAACAGCAAGC...CCTGGAAGGTGGCTCACAGCAAGGCCCCTCAACTCCGCCCAACACCCCCGATCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141588.8 |
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| 3UTR CAA 72 bp | GGAGTTGAGGGGCCTTGCTGTGAGCCACCTTCCAGGTaGCTTCCATCAACTCTCCCATTCTGCATGGCGATA | + |
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Preference number: 4 (lower is better) Translates to: GVEGPCCEPPSR*LPSTLPFCMAI Trigger: TATCGCCATGCAGAATGGGAGAGTTGATGGAAGCAACCTGGAAGGTGGCTCACAGCAAGGCCCCTCAACTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141588.8 |
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| CDS-3UTR GCA 90 bp | CTTTGCCCTAAGCAGACCAACAGCAGCTTCTATGTGCAGAACTTCCTGTGGCATGGAGTTGAGGGGCCTTaGTGTGAGCCACCTTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: LCPKQTNSSFYVQNFLWHGVEGP*CEPPSR Trigger: CCTGGAAGGTGGCTCACAGCAAGGCCCCTCAACTCC...ATGCCACAGGAAGTTCTGCACATAGAAGCTGCTGTTGGTCTGCTTAGGGCAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029761.14 |
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| CDS-3UTR CCA 90 bp | CTTTGCCCTAAGCAGACCAACAGCAGCTTCTATGTGCAGAACTTCCTGTGGCATGATGTTCTCTGGATTTaGGGGGCTTCGTGGATCGGG | + |
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Preference number: 4 (lower is better) Translates to: LCPKQTNSSFYVQNFLWHDVLWI*GASWIG Trigger: CCCGATCCACGAAGCCCCCCAAATCCAGAGAACATC...ATGCCACAGGAAGTTCTGCACATAGAAGCTGCTGTTGGTCTGCTTAGGGCAAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029761.14 |
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| CDS-3UTR CCA 90 bp | CTTTGCCCTAAGCAGACCAACAGCAGCTTCTATGTGCAGAACTTCCTGTGGCATAATCGCCTGCTCCCATaGAGACCGGTAGTACTTAGG | + |
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Preference number: 4 (lower is better) Translates to: LCPKQTNSSFYVQNFLWHNRLLP*RPVVLR Trigger: CCTAAGTACTACCGGTCTCCATGGGAGCAGGCGATT...ATGCCACAGGAAGTTCTGCACATAGAAGCTGCTGTTGGTCTGCTTAGGGCAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029761.14 |
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| CDS-3UTR CCA 90 bp | CTTTGCCCTAAGCAGACCAACAGCAGCTTCTATGTGCAGAACTTCCTGTGGCATTGCCCGAAAGAGGATTaGCAAAGGCCAAGAACCTGG | + |
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Preference number: 4 (lower is better) Translates to: LCPKQTNSSFYVQNFLWHCPKED*QRPRTW Trigger: CCAGGTTCTTGGCCTTTGCCAATCCTCTTTCGGGCA...ATGCCACAGGAAGTTCTGCACATAGAAGCTGCTGTTGGTCTGCTTAGGGCAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029761.14 |
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| CDS-3UTR GCA 90 bp | CTTTGCCCTAAGCAGACCAACAGCAGCTTCTATGTGCAGAACTTCCTGTGGCATAGCCACCTTCCAGGTTaGTTCCATCAACTCTCCCAT | + |
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Preference number: 4 (lower is better) Translates to: LCPKQTNSSFYVQNFLWHSHLPG*FHQLSH Trigger: ATGGGAGAGTTGATGGAAGCAACCTGGAAGGTGGCT...ATGCCACAGGAAGTTCTGCACATAGAAGCTGCTGTTGGTCTGCTTAGGGCAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029761.14 |
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| CDS-3UTR TCA 90 bp | CTTTGCCCTAAGCAGACCAACAGCAGCTTCTATGTGCAGAACTTCCTGTGGCATTTCCTTCGTGATGGCTaGTGCTTGCTGTTTCCTTTG | + |
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Preference number: 4 (lower is better) Translates to: LCPKQTNSSFYVQNFLWHFLRDG*CLLFPL Trigger: CAAAGGAAACAGCAAGCATCAGCCATCACGAAGGAA...ATGCCACAGGAAGTTCTGCACATAGAAGCTGCTGTTGGTCTGCTTAGGGCAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029761.14 |
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| CDS-3UTR TCA 90 bp | CTTTGCCCTAAGCAGACCAACAGCAGCTTCTATGTGCAGAACTTCCTGTGGCATCATGGATTTCCTTCGTaGTGGCTGATGCTTGCTGTT | + |
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Preference number: 4 (lower is better) Translates to: LCPKQTNSSFYVQNFLWHHGFPS*WLMLAV Trigger: AACAGCAAGCATCAGCCATCACGAAGGAAATCCATG...ATGCCACAGGAAGTTCTGCACATAGAAGCTGCTGTTGGTCTGCTTAGGGCAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029761.14 |
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| CDS-3UTR GCA 90 bp | CTTTGCCCTAAGCAGACCAACAGCAGCTTCTATGTGCAGAACTTCCTGTGGCATGTGATGGCTGATGCTTaGTGTTTCCTTTGCTTCACC | + |
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Preference number: 4 (lower is better) Translates to: LCPKQTNSSFYVQNFLWHVMADA*CFLCFT Trigger: GGTGAAGCAAAGGAAACAGCAAGCATCAGCCATCAC...ATGCCACAGGAAGTTCTGCACATAGAAGCTGCTGTTGGTCTGCTTAGGGCAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029761.14 |
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| CDS-3UTR GCA 90 bp | CTTTGCCCTAAGCAGACCAACAGCAGCTTCTATGTGCAGAACTTCCTGTGGCATTTTTGCCCAGGTCCATaGCGTCAACATCATGTCCAT | + |
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Preference number: 4 (lower is better) Translates to: LCPKQTNSSFYVQNFLWHFCPGP*RQHHVH Trigger: ATGGACATGATGTTGACGGCATGGACCTGGGCAAAA...ATGCCACAGGAAGTTCTGCACATAGAAGCTGCTGTTGGTCTGCTTAGGGCAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029761.14 |
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| CDS-3UTR TCA 90 bp | AGACCGGTAGTACTTAGGAACGGCCGTCGTGTTAAACCTTTCAGGAGGAATTTCTTCCTTCGTGATGGCTaGTGCTTGCTGTTTCCTTTG | + |
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Preference number: 4 (lower is better) Translates to: RPVVLRNGRRVKPFRRNFFLRDG*CLLFPL Trigger: CAAAGGAAACAGCAAGCATCAGCCATCACGAAGGAA...GAAATTCCTCCTGAAAGGTTTAACACGACGGCCGTTCCTAAGTACTACCGGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141588.8 |
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| CDS-3UTR GCA 90 bp | CTTTGCCCTAAGCAGACCAACAGCAGCTTCTATGTGCAGAACTTCCTGTGGCATGCTTGCTGTTTCCTTTaGTTCACCATGGCACTATGT | + |
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Preference number: 4 (lower is better) Translates to: LCPKQTNSSFYVQNFLWHACCFL*FTMALC Trigger: ACATAGTGCCATGGTGAAGCAAAGGAAACAGCAAGC...ATGCCACAGGAAGTTCTGCACATAGAAGCTGCTGTTGGTCTGCTTAGGGCAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029761.14 |
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| CDS-3UTR GCA 90 bp | CTTTGCCCTAAGCAGACCAACAGCAGCTTCTATGTGCAGAACTTCCTGTGGCATTCCAGAATATCCTGGTaGGATGTTCTCTGGATTTGG | + |
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Preference number: 4 (lower is better) Translates to: LCPKQTNSSFYVQNFLWHSRISW*DVLWIW Trigger: CCAAATCCAGAGAACATCGCACCAGGATATTCTGGA...ATGCCACAGGAAGTTCTGCACATAGAAGCTGCTGTTGGTCTGCTTAGGGCAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029761.14 |
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| CDS-3UTR GCA 90 bp | CTTTGCCCTAAGCAGACCAACAGCAGCTTCTATGTGCAGAACTTCCTGTGGCATGTAATCCCGCAGTTCTaGTTTTCCTTCAGGCTTGAA | + |
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Preference number: 4 (lower is better) Translates to: LCPKQTNSSFYVQNFLWHVIPQF*FSFRLE Trigger: TTCAAGCCTGAAGGAAAAGCAGAACTGCGGGATTAC...ATGCCACAGGAAGTTCTGCACATAGAAGCTGCTGTTGGTCTGCTTAGGGCAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029761.14 |
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| CDS-3UTR CCA 90 bp | CTTTGCCCTAAGCAGACCAACAGCAGCTTCTATGTGCAGAACTTCCTGTGGCATTGGTCCAGAATATCCTaGTGCGATGTTCTCTGGATT | + |
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Preference number: 4 (lower is better) Translates to: LCPKQTNSSFYVQNFLWHWSRIS*CDVLWI Trigger: AATCCAGAGAACATCGCACCAGGATATTCTGGACCA...ATGCCACAGGAAGTTCTGCACATAGAAGCTGCTGTTGGTCTGCTTAGGGCAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029761.14 |
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| CDS-3UTR CCA 90 bp | CTTTGCCCTAAGCAGACCAACAGCAGCTTCTATGTGCAGAACTTCCTGTGGCATAGGAATTTCCTTCAGTaGTCCAGAATATCCTGGTGC | + |
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Preference number: 4 (lower is better) Translates to: LCPKQTNSSFYVQNFLWHRNFLQ*SRISWC Trigger: GCACCAGGATATTCTGGACCACTGAAGGAAATTCCT...ATGCCACAGGAAGTTCTGCACATAGAAGCTGCTGTTGGTCTGCTTAGGGCAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029761.14 |
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| CDS-3UTR TCA 90 bp | CGGTATGTGGCCGGTATGCAAGACACTTTGATTGGTAGAACAGCTTGCTTTATGCATGGATTTCCTTCGTaGTGGCTGATGCTTGCTGTT | + |
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Preference number: 4 (lower is better) Translates to: RYVAGMQDTLIGRTACFMHGFPS*WLMLAV Trigger: AACAGCAAGCATCAGCCATCACGAAGGAAATCCATG...CATAAAGCAAGCTGTTCTACCAATCAAAGTGTCTTGCATACCGGCCACATACCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141588.8 |
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| CDS-3UTR TCA 90 bp | CTTTGCCCTAAGCAGACCAACAGCAGCTTCTATGTGCAGAACTTCCTGTGGCATTTGTCAGATCTTCTTTaGCGCATCTTAAACAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: LCPKQTNSSFYVQNFLWHLSDLL*RILNSL Trigger: CAGGCTGTTTAAGATGCGTCAAAGAAGATCTGACAA...ATGCCACAGGAAGTTCTGCACATAGAAGCTGCTGTTGGTCTGCTTAGGGCAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029761.14 |
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| CDS-3UTR CCA 90 bp | CTTTGCCCTAAGCAGACCAACAGCAGCTTCTATGTGCAGAACTTCCTGTGGCATTCAACATCATGTCCATaGATTTCCTTCGTGATGGCT | + |
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Preference number: 4 (lower is better) Translates to: LCPKQTNSSFYVQNFLWHSTSCP*ISFVMA Trigger: AGCCATCACGAAGGAAATCCATGGACATGATGTTGA...ATGCCACAGGAAGTTCTGCACATAGAAGCTGCTGTTGGTCTGCTTAGGGCAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029761.14 |
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| CDS-3UTR TCA 90 bp | CTTTGCCCTAAGCAGACCAACAGCAGCTTCTATGTGCAGAACTTCCTGTGGCATCTTTTCCTTCAGGCTTaGAAAGTTTTGGGTACAAAG | + |
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Preference number: 4 (lower is better) Translates to: LCPKQTNSSFYVQNFLWHLFLQA*KVLGTK Trigger: CTTTGTACCCAAAACTTTTCAAGCCTGAAGGAAAAG...ATGCCACAGGAAGTTCTGCACATAGAAGCTGCTGTTGGTCTGCTTAGGGCAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029761.14 |
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| CDS-3UTR GCA 90 bp | TTTGTCAGATCTTCTTTGACGCATCTTAAACAGCCTGGCCCCACGATTACTGAAGTGATGGCTGATGCTTaGTGTTTCCTTTGCTTCACC | + |
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Preference number: 4 (lower is better) Translates to: FVRSSLTHLKQPGPTITEVMADA*CFLCFT Trigger: GGTGAAGCAAAGGAAACAGCAAGCATCAGCCATCAC...TTCAGTAATCGTGGGGCCAGGCTGTTTAAGATGCGTCAAAGAAGATCTGACAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141588.8 |
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| CDS-3UTR CCA 90 bp | CTTTGCCCTAAGCAGACCAACAGCAGCTTCTATGTGCAGAACTTCCTGTGGCATTTCAAAACCTCCAAATaGAGTGGCAACCCTGTTAAA | + |
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Preference number: 4 (lower is better) Translates to: LCPKQTNSSFYVQNFLWHFKTSK*SGNPVK Trigger: TTTAACAGGGTTGCCACTCCATTTGGAGGTTTTGAA...ATGCCACAGGAAGTTCTGCACATAGAAGCTGCTGTTGGTCTGCTTAGGGCAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029761.14 |
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| CDS-3UTR GCA 90 bp | ACGGCCGTCGTGTTAAACCTTTCAGGAGGAATTTCCTTCAGTGGTCCAGAATATGTGCAAGGCTTCATTTaGATGTCCATGGATTTCCTT | + |
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Preference number: 4 (lower is better) Translates to: TAVVLNLSGGISFSGPEYVQGFI*MSMDFL Trigger: AAGGAAATCCATGGACATGCAAATGAAGCCTTGCAC...ATATTCTGGACCACTGAAGGAAATTCCTCCTGAAAGGTTTAACACGACGGCCGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141588.8 |
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| CDS-3UTR CCA 90 bp | CTTTGCCCTAAGCAGACCAACAGCAGCTTCTATGTGCAGAACTTCCTGTGGCATCCACGATTACTGAAATaGGACAATTCTTCTATCATG | + |
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Preference number: 4 (lower is better) Translates to: LCPKQTNSSFYVQNFLWHPRLLK*DNSSIM Trigger: CATGATAGAAGAATTGTCCCATTTCAGTAATCGTGG...ATGCCACAGGAAGTTCTGCACATAGAAGCTGCTGTTGGTCTGCTTAGGGCAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029761.14 |
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| 3UTR CAA 72 bp | AACTCTCCCATTCTGCATGGCGATATTGTGATTAATTaGTGCTCTAGATTCATACTGGAAATTTTCAAAGGT | + |
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Preference number: 4 (lower is better) Translates to: NSPILHGDIVIN*CSRFILEIFKG Trigger: ACCTTTGAAAATTTCCAGTATGAATCTAGAGCACAAATTAATCACAATATCGCCATGCAGAATGGGAGAGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141588.8 |
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| CDS-3UTR CAA 90 bp | CTTTGCCCTAAGCAGACCAACAGCAGCTTCTATGTGCAGAACTTCCTGTGGCATGGGTGTTGGGCGGAGTaGAGGGGCCTTGCTGTGAGC | + |
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Preference number: 5 (lower is better) Translates to: LCPKQTNSSFYVQNFLWHGCWAE*RGLAVS Trigger: GCTCACAGCAAGGCCCCTCAACTCCGCCCAACACCC...ATGCCACAGGAAGTTCTGCACATAGAAGCTGCTGTTGGTCTGCTTAGGGCAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029761.14 |
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| CDS CCA 90 bp | CTCAGTTGTGATCACGACGGGGATATTCTCAGATACCCACCCCTTTaGCGCCCTGTTAAAGCATCGTCTGCCCGAAAGAGGATTGGCAAA | + |
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Preference number: 5 (lower is better) Translates to: LSCDHDGDILRYPPL*RPVKASSARKRIGK Trigger: TTTGCCAATCCTCTTTCGGGCAGACGATGCTTTAACAGGGCGCCAAAGGGGTGGGTATCTGAGAATATCCCCGTCGTGATCACAACTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029761.14 |
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| CDS-3UTR CAA 90 bp | CTTTGCCCTAAGCAGACCAACAGCAGCTTCTATGTGCAGAACTTCCTGTGGCATGAGCCACCTTCCAGGTaGCTTCCATCAACTCTCCCA | + |
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Preference number: 5 (lower is better) Translates to: LCPKQTNSSFYVQNFLWHEPPSR*LPSTLP Trigger: TGGGAGAGTTGATGGAAGCAACCTGGAAGGTGGCTC...ATGCCACAGGAAGTTCTGCACATAGAAGCTGCTGTTGGTCTGCTTAGGGCAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029761.14 |
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| CDS-3UTR CAA 90 bp | CCTTGCTGTGAGCCACCTTCCAGGTTGCTTCCATCAACTCTCCCATTCTGCATGTGCTTGCTGTTTCCTTaGCTTCACCATGGCACTATG | + |
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Preference number: 5 (lower is better) Translates to: PCCEPPSRLLPSTLPFCMCLLFP*LHHGTM Trigger: CATAGTGCCATGGTGAAGCAAAGGAAACAGCAAGCA...CATGCAGAATGGGAGAGTTGATGGAAGCAACCTGGAAGGTGGCTCACAGCAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141588.8 |
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| CDS-3UTR CAA 90 bp | CTTTGCCCTAAGCAGACCAACAGCAGCTTCTATGTGCAGAACTTCCTGTGGCATGGGATGCTAACTTTTTaGCCCAGGTCCATGCCGTCA | + |
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Preference number: 5 (lower is better) Translates to: LCPKQTNSSFYVQNFLWHGMLTF*PRSMPS Trigger: TGACGGCATGGACCTGGGCAAAAAAGTTAGCATCCC...ATGCCACAGGAAGTTCTGCACATAGAAGCTGCTGTTGGTCTGCTTAGGGCAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029761.14 |
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| CDS-3UTR CAA 90 bp | CTTTGCCCTAAGCAGACCAACAGCAGCTTCTATGTGCAGAACTTCCTGTGGCATTGCTTGCTGTTTCCTTaGCTTCACCATGGCACTATG | + |
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Preference number: 5 (lower is better) Translates to: LCPKQTNSSFYVQNFLWHCLLFP*LHHGTM Trigger: CATAGTGCCATGGTGAAGCAAAGGAAACAGCAAGCA...ATGCCACAGGAAGTTCTGCACATAGAAGCTGCTGTTGGTCTGCTTAGGGCAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029761.14 |
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| CDS-3UTR CAA 90 bp | CTTTGCCCTAAGCAGACCAACAGCAGCTTCTATGTGCAGAACTTCCTGTGGCATTTTGTCAGATCTTCTTaGACGCATCTTAAACAGCCT | + |
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Preference number: 5 (lower is better) Translates to: LCPKQTNSSFYVQNFLWHFVRSS*THLKQP Trigger: AGGCTGTTTAAGATGCGTCAAAGAAGATCTGACAAA...ATGCCACAGGAAGTTCTGCACATAGAAGCTGCTGTTGGTCTGCTTAGGGCAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029761.14 |
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| CDS CAA 72 bp | GGCGCCCTGTTAAAGCATCGTCTGCCCGAAAGAGGATaGGCAAAGGCCAAGAACCTGGGATCTGTCAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: GALLKHRLPERG*AKAKNLGSVSS Trigger: GCTGCTGACAGATCCCAGGTTCTTGGCCTTTGCCAATCCTCTTTCGGGCAGACGATGCTTTAACAGGGCGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029761.14 |
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| CDS CCA 72 bp | GATCACGACGGGGATATTCTCAGATACCCACCCCTTTaGCGCCCTGTTAAAGCATCGTCTGCCCGAAAGAGG | + |
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Preference number: 6 (lower is better) Translates to: DHDGDILRYPPL*RPVKASSARKR Trigger: CCTCTTTCGGGCAGACGATGCTTTAACAGGGCGCCAAAGGGGTGGGTATCTGAGAATATCCCCGTCGTGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029761.14 |
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| CDS CAA 90 bp | CACCCCTTTGGCGCCCTGTTAAAGCATCGTCTGCCCGAAAGAGGATaGGCAAAGGCCAAGAACCTGGGATCTGTCAGCAGCAGTAGTTCA | + |
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Preference number: 6 (lower is better) Translates to: HPFGALLKHRLPERG*AKAKNLGSVSSSSS Trigger: TGAACTACTGCTGCTGACAGATCCCAGGTTCTTGGCCTTTGCCAATCCTCTTTCGGGCAGACGATGCTTTAACAGGGCGCCAAAGGGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029761.14 |
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| CDS CCA 72 bp | GTCTGCCCGAAAGAGGATTGGCAAAGGCCAAGAACCTaGGATCTGTCAGCAGCAGTAGTTCAAAATCTGGAA | + |
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Preference number: 6 (lower is better) Translates to: VCPKEDWQRPRT*DLSAAVVQNLE Trigger: TTCCAGATTTTGAACTACTGCTGCTGACAGATCCCAGGTTCTTGGCCTTTGCCAATCCTCTTTCGGGCAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029761.14 |
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| CDS TCA 72 bp | GTCAACATCATGTCCATGGATTTCCTTCGTGATGGCTaGTGCTTGCTGTTTCCTTTGCTTCACCATGGCACT | + |
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Preference number: 6 (lower is better) Translates to: VNIMSMDFLRDG*CLLFPLLHHGT Trigger: AGTGCCATGGTGAAGCAAAGGAAACAGCAAGCATCAGCCATCACGAAGGAAATCCATGGACATGATGTTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029761.14 |
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| CDS GCA 72 bp | GCATGTCCATGGATTTCCTTCGTGATGGCTGATGCTTaGTGTTTCCTTTGCTTCACCATGGCACTATGTGAT | + |
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Preference number: 6 (lower is better) Translates to: ACPWISFVMADA*CFLCFTMALCD Trigger: ATCACATAGTGCCATGGTGAAGCAAAGGAAACAGCAAGCATCAGCCATCACGAAGGAAATCCATGGACATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141588.8 |
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| CDS CAA 72 bp | TCTTCTATCATGATGTCTCTGGGGATGCTAACTTTTTaGCCCAGGTCCATGCCGTCAACATCATGTCCATGG | + |
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Preference number: 6 (lower is better) Translates to: SSIMMSLGMLTF*PRSMPSTSCPW Trigger: CCATGGACATGATGTTGACGGCATGGACCTGGGCAAAAAAGTTAGCATCCCCAGAGACATCATGATAGAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029761.14 |
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| CDS CAA 90 bp | TGGGACAATTCTTCTATCATGATGTCTCTGGGGATGCTAACTTTTTaGCCCAGGTCCATGCCGTCAACATCATGTCCATGGATTTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: WDNSSIMMSLGMLTF*PRSMPSTSCPWISF Trigger: GAAGGAAATCCATGGACATGATGTTGACGGCATGGACCTGGGCAAAAAAGTTAGCATCCCCAGAGACATCATGATAGAAGAATTGTCCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029761.14 |
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| CDS GCA 72 bp | TCATGTCCATGGATTTCCTTCGTGATGGCTGATGCTTaGTGTTTCCTTTGCTTCACCATGGCACTATGTGAT | + |
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Preference number: 6 (lower is better) Translates to: SCPWISFVMADA*CFLCFTMALCD Trigger: ATCACATAGTGCCATGGTGAAGCAAAGGAAACAGCAAGCATCAGCCATCACGAAGGAAATCCATGGACATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029761.14 |
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| CDS CCA 72 bp | ATATTTTCATGGTGCAAGGCTTCATTTGCATGTCCATaGATTTCCTTCGTGATGGCTGATGCTTGCTGTTTC | + |
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Preference number: 6 (lower is better) Translates to: IFSWCKASFACP*ISFVMADACCF Trigger: GAAACAGCAAGCATCAGCCATCACGAAGGAAATCCATGGACATGCAAATGAAGCCTTGCACCATGAAAATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141588.8 |
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