Pregenerated sensors for MYOZ1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000068697Ensembl transcript IDs: ENSMUST00000090469.8
Found 54 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCTGAGCTGGTGAGGAGGGATGCTTCGGAGCAGGAACTTGAAGGGTaGAAAGGCAACGGACCCCACCCTTTACCCTCCATTGCCACAAGA | + |
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Preference number: 1 (lower is better) Translates to: SELVRRDASEQELEG*KGNGPHPLPSIATR Trigger: TCTTGTGGCAATGGAGGGTAAAGGGTGGGGTCCGTTGCCTTTCCACCCTTCAAGTTCCTGCTCCGAAGCATCCCTCCTCACCAGCTCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090469.8 |
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| 3UTR TCA 90 bp | AGAGCAGATTCCATATGGTACAGCAGGATGGGAGCTCTGAGCTGGTaGGGAGGGATGCTTCGGAGCAGGAACTTGAAGGGTGGAAAGGCA | + |
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Preference number: 1 (lower is better) Translates to: RADSIWYSRMGALSW*GGMLRSRNLKGGKA Trigger: TGCCTTTCCACCCTTCAAGTTCCTGCTCCGAAGCATCCCTCCTCACCAGCTCAGAGCTCCCATCCTGCTGTACCATATGGAATCTGCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090469.8 |
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| 3UTR CCA 90 bp | AAGGCAACGGACCCCACCCTTTACCCTCCATTGCCACAAGAATACTaGATTAACAGTTGGGGCATCCTGTCCAGCATCCACTCTCAAATT | + |
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Preference number: 1 (lower is better) Translates to: KATDPTLYPPLPQEY*INSWGILSSIHSQI Trigger: AATTTGAGAGTGGATGCTGGACAGGATGCCCCAACTGTTAATCCAGTATTCTTGTGGCAATGGAGGGTAAAGGGTGGGGTCCGTTGCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090469.8 |
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| 3UTR-3UTR TCA 90 bp | ACCGGTGGCAGAGAAAATTCCATAAAAGAGCAGATTCCATATGGTACAGCAGGAGGAGCTCTGAGCTGGTaGGGAGGGATGCTTCGGAGC | + |
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Preference number: 2 (lower is better) Translates to: TGGRENSIKEQIPYGTAGGALSW*GGMLRS Trigger: GCTCCGAAGCATCCCTCCTCACCAGCTCAGAGCTCC...TCCTGCTGTACCATATGGAATCTGCTCTTTTATGGAATTTTCTCTGCCACCGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090469.8 |
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| 3UTR-3UTR CCA 90 bp | AGGGTGGAAAGGCAACGGACCCCACCCTTTACCCTCCATTGCCACAAGAATACTCATCCACTCTCAAATTaGAACCAGAGAAGGGAAATG | + |
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Preference number: 2 (lower is better) Translates to: RVERQRTPPFTLHCHKNTHPLSN*NQRREM Trigger: CATTTCCCTTCTCTGGTTCCAATTTGAGAGTGGATG...AGTATTCTTGTGGCAATGGAGGGTAAAGGGTGGGGTCCGTTGCCTTTCCACCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090469.8 |
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| 3UTR CCA 72 bp | GTGAGGAGGGATGCTTCGGAGCAGGAACTTGAAGGGTaGAAAGGCAACGGACCCCACCCTTTACCCTCCATT | + |
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Preference number: 3 (lower is better) Translates to: VRRDASEQELEG*KGNGPHPLPSI Trigger: AATGGAGGGTAAAGGGTGGGGTCCGTTGCCTTTCCACCCTTCAAGTTCCTGCTCCGAAGCATCCCTCCTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090469.8 |
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| 3UTR TCA 72 bp | GAGCAGATTCCATATGGTACAGCAGGATGGGAGCTCTaGGCTGGTGAGGAGGGATGCTTCGGAGCAGGAACT | + |
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Preference number: 3 (lower is better) Translates to: EQIPYGTAGWEL*AGEEGCFGAGT Trigger: AGTTCCTGCTCCGAAGCATCCCTCCTCACCAGCTCAGAGCTCCCATCCTGCTGTACCATATGGAATCTGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090469.8 |
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| 3UTR GCA 72 bp | GTGGAAAGGCAACGGACCCCACCCTTTACCCTCCATTaGCACAAGAATACTGGATTAACAGTTGGGGCATCC | + |
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Preference number: 3 (lower is better) Translates to: VERQRTPPFTLH*HKNTGLTVGAS Trigger: GGATGCCCCAACTGTTAATCCAGTATTCTTGTGGCAATGGAGGGTAAAGGGTGGGGTCCGTTGCCTTTCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090469.8 |
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| 3UTR CCA 72 bp | GACCCCACCCTTTACCCTCCATTGCCACAAGAATACTaGATTAACAGTTGGGGCATCCTGTCCAGCATCCAC | + |
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Preference number: 3 (lower is better) Translates to: DPTLYPPLPQEY*INSWGILSSIH Trigger: GTGGATGCTGGACAGGATGCCCCAACTGTTAATCCAGTATTCTTGTGGCAATGGAGGGTAAAGGGTGGGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090469.8 |
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| 3UTR-3UTR CAA 90 bp | GACCCCACCCTTTACCCTCCATTGCCACAAGAATACTGGATTAACAGTTGGGGCGCATCCACTCTCAAATaGGAACCAGAGAAGGGAAAT | + |
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Preference number: 3 (lower is better) Translates to: DPTLYPPLPQEYWINSWGASTLK*EPEKGN Trigger: ATTTCCCTTCTCTGGTTCCAATTTGAGAGTGGATGC...GCCCCAACTGTTAATCCAGTATTCTTGTGGCAATGGAGGGTAAAGGGTGGGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090469.8 |
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| CDS-3UTR GCA 90 bp | TCGGAGCAGGAACTTGAAGGGTGGAAAGGCAACGGACCCCACCCTTTACCCTCCCAGCAGAGCCACTGCTaGCAGCCTGGCCTCCACTGC | + |
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Preference number: 4 (lower is better) Translates to: SEQELEGWKGNGPHPLPSQQSHC*QPGLHC Trigger: GCAGTGGAGGCCAGGCTGGCAGCAGTGGCTCTGCTG...GGAGGGTAAAGGGTGGGGTCCGTTGCCTTTCCACCCTTCAAGTTCCTGCTCCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090469.8 |
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| CDS-3UTR CCA 90 bp | TCGGAGCAGGAACTTGAAGGGTGGAAAGGCAACGGACCCCACCCTTTACCCTCCGAGGATCAACCCCCATaGCCCGATCCCATGGGGAAA | + |
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Preference number: 4 (lower is better) Translates to: SEQELEGWKGNGPHPLPSEDQPP*PDPMGK Trigger: TTTCCCCATGGGATCGGGCCATGGGGGTTGATCCTC...GGAGGGTAAAGGGTGGGGTCCGTTGCCTTTCCACCCTTCAAGTTCCTGCTCCGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090469.8 |
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| CDS-3UTR GCA 90 bp | GGGAGCTCTGAGCTGGTGAGGAGGGATGCTTCGGAGCAGGAACTTGAAGGGTGGTTCTCCACCCGCATCTaGCGTAGCTTGAACATCTTG | + |
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Preference number: 4 (lower is better) Translates to: GSSELVRRDASEQELEGWFSTRI*RSLNIL Trigger: CAAGATGTTCAAGCTACGGCAGATGCGGGTGGAGAA...CCACCCTTCAAGTTCCTGCTCCGAAGCATCCCTCCTCACCAGCTCAGAGCTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090469.8 |
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| CDS-3UTR GCA 90 bp | AGGAACTTGAAGGGTGGAAAGGCAACGGACCCCACCCTTTACCCTCCATTGCCACCTGGCCTCCACTGCTaGCCTTGCCATATGAGAAGC | + |
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Preference number: 4 (lower is better) Translates to: RNLKGGKATDPTLYPPLPPGLHC*PCHMRS Trigger: GCTTCTCATATGGCAAGGGCAGCAGTGGAGGCCAGG...TGGCAATGGAGGGTAAAGGGTGGGGTCCGTTGCCTTTCCACCCTTCAAGTTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090469.8 |
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| CDS-3UTR GCA 90 bp | GGGTGGAAAGGCAACGGACCCCACCCTTTACCCTCCATTGCCACAAGAATACTGCAGCCTGGCCTCCACTaGTGCCCTTGCCATATGAGA | + |
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Preference number: 4 (lower is better) Translates to: GWKGNGPHPLPSIATRILQPGLH*CPCHMR Trigger: TCTCATATGGCAAGGGCAGCAGTGGAGGCCAGGCTG...CAGTATTCTTGTGGCAATGGAGGGTAAAGGGTGGGGTCCGTTGCCTTTCCACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090469.8 |
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| CDS-3UTR TCA 90 bp | AGGAACTTGAAGGGTGGAAAGGCAACGGACCCCACCCTTTACCCTCCATTGCCACCATATGAGAAGCCCTaGCCAGCTGTCTCCAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: RNLKGGKATDPTLYPPLPPYEKP*PAVSSC Trigger: ACAGCTGGAGACAGCTGGTCAGGGCTTCTCATATGG...TGGCAATGGAGGGTAAAGGGTGGGGTCCGTTGCCTTTCCACCCTTCAAGTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090469.8 |
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| CDS-3UTR TCA 90 bp | AGGGTGGAAAGGCAACGGACCCCACCCTTTACCCTCCATTGCCACAAGAATACTGCTGCCCTTGCCATATaGGAAGCCCTGACCAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RVERQRTPPFTLHCHKNTAALAI*EALTSC Trigger: ACAGCTGGTCAGGGCTTCTCATATGGCAAGGGCAGC...AGTATTCTTGTGGCAATGGAGGGTAAAGGGTGGGGTCCGTTGCCTTTCCACCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090469.8 |
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| CDS-3UTR CCA 90 bp | GAGCAGGAACTTGAAGGGTGGAAAGGCAACGGACCCCACCCTTTACCCTCCATTTGGGGAGTTCAGCTTTaGCACCGTATGCCAGTAGGT | + |
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Preference number: 4 (lower is better) Translates to: EQELEGWKGNGPHPLPSIWGVQL*HRMPVG Trigger: ACCTACTGGCATACGGTGCCAAAGCTGAACTCCCCA...AATGGAGGGTAAAGGGTGGGGTCCGTTGCCTTTCCACCCTTCAAGTTCCTGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090469.8 |
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| CDS-3UTR TCA 90 bp | TCGGAGCAGGAACTTGAAGGGTGGAAAGGCAACGGACCCCACCCTTTACCCTCCGCATTGCTGTCCTGTTaGAGGACTTATATTTGGGGA | + |
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Preference number: 4 (lower is better) Translates to: SEQELEGWKGNGPHPLPSALLSC*RTYIWG Trigger: TCCCCAAATATAAGTCCTTCAACAGGACAGCAATGC...GGAGGGTAAAGGGTGGGGTCCGTTGCCTTTCCACCCTTCAAGTTCCTGCTCCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090469.8 |
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| CDS-3UTR GCA 90 bp | TACCGGTGGCAGAGAAAATTCCATAAAAGAGCAGATTCCATATGGTACAGCAGGGTCCAGCAGAGCCACTaGTGCCAGCCTGGCCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: YRWQRKFHKRADSIWYSRVQQSH*CQPGLH Trigger: GTGGAGGCCAGGCTGGCAGCAGTGGCTCTGCTGGAC...CCTGCTGTACCATATGGAATCTGCTCTTTTATGGAATTTTCTCTGCCACCGGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090469.8 |
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| CDS-3UTR TCA 90 bp | CAGGAACTTGAAGGGTGGAAAGGCAACGGACCCCACCCTTTACCCTCCATTGCCCATAATCAGTTTGCTTaGCTTCCTCCTCTTGTTAGG | + |
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Preference number: 4 (lower is better) Translates to: QELEGWKGNGPHPLPSIAHNQFA*LPPLVR Trigger: CCTAACAAGAGGAGGAAGTCAAGCAAACTGATTATG...GGCAATGGAGGGTAAAGGGTGGGGTCCGTTGCCTTTCCACCCTTCAAGTTCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090469.8 |
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| CDS-3UTR TCA 90 bp | GGGCATCCTGTCCAGCATCCACTCTCAAATTGGAACCAGAGAAGGGAAATGATGAGTTCCACTTTTTGCTaGGGATCAACCCCCATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GHPVQHPLSNWNQRREMMSSTFC*GSTPMA Trigger: GGCCATGGGGGTTGATCCTCAGCAAAAAGTGGAACT...CATCATTTCCCTTCTCTGGTTCCAATTTGAGAGTGGATGCTGGACAGGATGCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000090469.8 |
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| CDS-3UTR GCA 90 bp | GACCCCACCCTTTACCCTCCATTGCCACAAGAATACTGGATTAACAGTTGGGGCGCATCTGGAAGGTCATaGGTTTGGAGGCCTTCTCAT | + |
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Preference number: 4 (lower is better) Translates to: DPTLYPPLPQEYWINSWGASGRS*VWRPSH Trigger: ATGAGAAGGCCTCCAAACGCATGACCTTCCAGATGC...GCCCCAACTGTTAATCCAGTATTCTTGTGGCAATGGAGGGTAAAGGGTGGGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090469.8 |
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| CDS-3UTR CCA 90 bp | AGGGTGGAAAGGCAACGGACCCCACCCTTTACCCTCCATTGCCACAAGAATACTTCAAACTTGGGCATCTaGAAGGTCATGCGTTTGGAG | + |
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Preference number: 4 (lower is better) Translates to: RVERQRTPPFTLHCHKNTSNLGI*KVMRLE Trigger: CTCCAAACGCATGACCTTCCAGATGCCCAAGTTTGA...AGTATTCTTGTGGCAATGGAGGGTAAAGGGTGGGGTCCGTTGCCTTTCCACCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090469.8 |
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| CDS-3UTR TCA 90 bp | ACCGGTGGCAGAGAAAATTCCATAAAAGAGCAGATTCCATATGGTACAGCAGGAGCATCTGCCGTAGCTTaGACATCTTGGAGCCTCGGT | + |
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Preference number: 4 (lower is better) Translates to: TGGRENSIKEQIPYGTAGASAVA*TSWSLG Trigger: ACCGAGGCTCCAAGATGTTCAAGCTACGGCAGATGC...TCCTGCTGTACCATATGGAATCTGCTCTTTTATGGAATTTTCTCTGCCACCGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090469.8 |
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| CDS-3UTR CCA 90 bp | GGGCATCCTGTCCAGCATCCACTCTCAAATTGGAACCAGAGAAGGGAAATGATGCAACATCACATCCCTTaGGACACTGATCTTCTTGCC | + |
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Preference number: 4 (lower is better) Translates to: GHPVQHPLSNWNQRREMMQHHIP*DTDLLA Trigger: GGCAAGAAGATCAGTGTCCCAAGGGATGTGATGTTG...CATCATTTCCCTTCTCTGGTTCCAATTTGAGAGTGGATGCTGGACAGGATGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090469.8 |
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| CDS-3UTR CCA 90 bp | TGTCCAGCATCCACTCTCAAATTGGAACCAGAGAAGGGAAATGATGCACATGACGGAAGGTCATGCGTTTaGAGGCCTTCTCATATCCAC | + |
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Preference number: 4 (lower is better) Translates to: CPASTLKLEPEKGNDAHDGRSCV*RPSHIH Trigger: GTGGATATGAGAAGGCCTCCAAACGCATGACCTTCC...GTCATGTGCATCATTTCCCTTCTCTGGTTCCAATTTGAGAGTGGATGCTGGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090469.8 |
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| CDS-3UTR GCA 90 bp | TACCGGTGGCAGAGAAAATTCCATAAAAGAGCAGATTCCATATGGTACAGCAGGTCCACCGTAGGGCATTaGTGTCCTGTTGAAGGACTT | + |
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Preference number: 4 (lower is better) Translates to: YRWQRKFHKRADSIWYSRSTVGH*CPVEGL Trigger: AAGTCCTTCAACAGGACAGCAATGCCCTACGGTGGA...CCTGCTGTACCATATGGAATCTGCTCTTTTATGGAATTTTCTCTGCCACCGGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090469.8 |
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| CDS-3UTR TCA 90 bp | AATACTGGATTAACAGTTGGGGCATCCTGTCCAGCATCCACTCTCAAATTGGAACTGGAAGTGATCCATTaGGCTGTCAGAGAAAACATC | + |
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Preference number: 4 (lower is better) Translates to: NTGLTVGASCPASTLKLELEVIH*AVRENI Trigger: GATGTTTTCTCTGACAGCTCAATGGATCACTTCCAG...TTCCAATTTGAGAGTGGATGCTGGACAGGATGCCCCAACTGTTAATCCAGTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090469.8 |
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| CDS TCA 90 bp | CTGCCAGCCTGGCCTCCACTGCTGCCCTTGCCATATGAGAAGCCCTaGCCAGCTGTCTCCAGCTGTCCTCCCACTGTGGGAAGAAACTTC | + |
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Preference number: 5 (lower is better) Translates to: LPAWPPLLPLPYEKP*PAVSSCPPTVGRNF Trigger: GAAGTTTCTTCCCACAGTGGGAGGACAGCTGGAGACAGCTGGTCAGGGCTTCTCATATGGCAAGGGCAGCAGTGGAGGCCAGGCTGGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090469.8 |
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| CDS GCA 90 bp | CACTCAGCAGAGGCCCCAGGTCAAACTTGGGCATCTGGAAGGTCATaGGTTTGGAGGCCTTCTCATATCCACCGTAGGGCATTGCTGTCC | + |
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Preference number: 5 (lower is better) Translates to: HSAEAPGQTWASGRS*VWRPSHIHRRALLS Trigger: GGACAGCAATGCCCTACGGTGGATATGAGAAGGCCTCCAAACGCATGACCTTCCAGATGCCCAAGTTTGACCTGGGGCCTCTGCTGAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090469.8 |
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| CDS-3UTR CAA 90 bp | CAGGAACTTGAAGGGTGGAAAGGCAACGGACCCCACCCTTTACCCTCCATTGCCATCTTGGAGCCTCGGTaGGTAAGAAGGGACAGCTCC | + |
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Preference number: 5 (lower is better) Translates to: QELEGWKGNGPHPLPSIAILEPR*VRRDSS Trigger: GGAGCTGTCCCTTCTTACCAACCGAGGCTCCAAGAT...GGCAATGGAGGGTAAAGGGTGGGGTCCGTTGCCTTTCCACCCTTCAAGTTCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090469.8 |
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| CDS-3UTR CAA 90 bp | GGGTGGAAAGGCAACGGACCCCACCCTTTACCCTCCATTGCCACAAGAATACTGCGCATCTGCCGTAGCTaGAACATCTTGGAGCCTCGG | + |
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Preference number: 5 (lower is better) Translates to: GWKGNGPHPLPSIATRILRICRS*NILEPR Trigger: CCGAGGCTCCAAGATGTTCAAGCTACGGCAGATGCG...CAGTATTCTTGTGGCAATGGAGGGTAAAGGGTGGGGTCCGTTGCCTTTCCACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090469.8 |
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| CDS CCA 90 bp | TGTAGAGGACCAGGGGTTCACTCAGCAGAGGCCCCAGGTCAAACTTaGGCATCTGGAAGGTCATGCGTTTGGAGGCCTTCTCATATCCAC | + |
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Preference number: 5 (lower is better) Translates to: CRGPGVHSAEAPGQT*ASGRSCVWRPSHIH Trigger: GTGGATATGAGAAGGCCTCCAAACGCATGACCTTCCAGATGCCCAAGTTTGACCTGGGGCCTCTGCTGAGTGAACCCCTGGTCCTCTACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090469.8 |
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| CDS-3UTR CAA 90 bp | GGGCATCCTGTCCAGCATCCACTCTCAAATTGGAACCAGAGAAGGGAAATGATGCTTGACTTCCTCCTCTaGTTAGGGGCCGGGGTTCCT | + |
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Preference number: 5 (lower is better) Translates to: GHPVQHPLSNWNQRREMMLDFLL*LGAGVP Trigger: AGGAACCCCGGCCCCTAACAAGAGGAGGAAGTCAAG...CATCATTTCCCTTCTCTGGTTCCAATTTGAGAGTGGATGCTGGACAGGATGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090469.8 |
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| CDS-3UTR CAA 90 bp | AAGGCAACGGACCCCACCCTTTACCCTCCATTGCCACAAGAATACTGGATTAACGGGACACTGATCTTCTaGCCCAGGTTCAGGCCTGAG | + |
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Preference number: 5 (lower is better) Translates to: KATDPTLYPPLPQEYWINGTLIF*PRFRPE Trigger: CTCAGGCCTGAACCTGGGCAAGAAGATCAGTGTCCC...GTTAATCCAGTATTCTTGTGGCAATGGAGGGTAAAGGGTGGGGTCCGTTGCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090469.8 |
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| CDS-3UTR CAA 90 bp | AGGAACTTGAAGGGTGGAAAGGCAACGGACCCCACCCTTTACCCTCCATTGCCACGTAGCTTGAACATCTaGGAGCCTCGGTTGGTAAGA | + |
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Preference number: 5 (lower is better) Translates to: RNLKGGKATDPTLYPPLPRSLNI*EPRLVR Trigger: TCTTACCAACCGAGGCTCCAAGATGTTCAAGCTACG...TGGCAATGGAGGGTAAAGGGTGGGGTCCGTTGCCTTTCCACCCTTCAAGTTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090469.8 |
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| CDS-3UTR CAA 90 bp | GGGCATCCTGTCCAGCATCCACTCTCAAATTGGAACCAGAGAAGGGAAATGATGGGCATTGCTGTCCTGTaGAAGGACTTATATTTGGGG | + |
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Preference number: 5 (lower is better) Translates to: GHPVQHPLSNWNQRREMMGIAVL*KDLYLG Trigger: CCCCAAATATAAGTCCTTCAACAGGACAGCAATGCC...CATCATTTCCCTTCTCTGGTTCCAATTTGAGAGTGGATGCTGGACAGGATGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090469.8 |
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| CDS-3UTR CAA 90 bp | AATACTGGATTAACAGTTGGGGCATCCTGTCCAGCATCCACTCTCAAATTGGAAGCCAAGTTCCACTTTTaGCTGAGGATCAACCCCCAT | + |
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Preference number: 5 (lower is better) Translates to: NTGLTVGASCPASTLKLEAKFHF*LRINPH Trigger: ATGGGGGTTGATCCTCAGCAAAAAGTGGAACTTGGC...TTCCAATTTGAGAGTGGATGCTGGACAGGATGCCCCAACTGTTAATCCAGTATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090469.8 |
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| CDS-3UTR CAA 90 bp | TGTCCAGCATCCACTCTCAAATTGGAACCAGAGAAGGGAAATGATGCACATGACTCTGGAAGTGATCCATaGAGCTGTCAGAGAAAACAT | + |
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Preference number: 5 (lower is better) Translates to: CPASTLKLEPEKGNDAHDSGSDP*SCQRKH Trigger: ATGTTTTCTCTGACAGCTCAATGGATCACTTCCAGA...GTCATGTGCATCATTTCCCTTCTCTGGTTCCAATTTGAGAGTGGATGCTGGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090469.8 |
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| CDS-3UTR CAA 90 bp | AATACTGGATTAACAGTTGGGGCATCCTGTCCAGCATCCACTCTCAAATTGGAATTGAAGGACTTATATTaGGGGAGTTCAGCTTTGGCA | + |
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Preference number: 5 (lower is better) Translates to: NTGLTVGASCPASTLKLELKDLY*GSSALA Trigger: TGCCAAAGCTGAACTCCCCAAATATAAGTCCTTCAA...TTCCAATTTGAGAGTGGATGCTGGACAGGATGCCCCAACTGTTAATCCAGTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090469.8 |
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| CDS TCA 72 bp | TGGCCTCCACTGCTGCCCTTGCCATATGAGAAGCCCTaGCCAGCTGTCTCCAGCTGTCCTCCCACTGTGGGA | + |
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Preference number: 6 (lower is better) Translates to: WPPLLPLPYEKP*PAVSSCPPTVG Trigger: TCCCACAGTGGGAGGACAGCTGGAGACAGCTGGTCAGGGCTTCTCATATGGCAAGGGCAGCAGTGGAGGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090469.8 |
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| CDS CAA 90 bp | AGGCCTGAGCTCTCCCGGCCACCTCCAGTGAGCTCCATAATCAGTTaGCTTGACTTCCTCCTCTTGTTAGGGGCCGGGGTTCCTGAGAGT | + |
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Preference number: 6 (lower is better) Translates to: RPELSRPPPVSSIIS*LDFLLLLGAGVPES Trigger: ACTCTCAGGAACCCCGGCCCCTAACAAGAGGAGGAAGTCAAGCAAACTGATTATGGAGCTCACTGGAGGTGGCCGGGAGAGCTCAGGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090469.8 |
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| CDS TCA 72 bp | AGTGACATGTTTTCCATCTCCACCTGCCTGGTCACCTaGTCCGGGCTCTCCAAGCCCTACTGTGCCAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: SDMFSISTCLVT*SGLSKPYCARS Trigger: GCTCCTGGCACAGTAGGGCTTGGAGAGCCCGGATCAGGTGACCAGGCAGGTGGAGATGGAAAACATGTCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090469.8 |
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| CDS GCA 72 bp | GAGGCCCCAGGTCAAACTTGGGCATCTGGAAGGTCATaGGTTTGGAGGCCTTCTCATATCCACCGTAGGGCA | + |
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Preference number: 6 (lower is better) Translates to: EAPGQTWASGRS*VWRPSHIHRRA Trigger: TGCCCTACGGTGGATATGAGAAGGCCTCCAAACGCATGACCTTCCAGATGCCCAAGTTTGACCTGGGGCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090469.8 |
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| CDS CAA 72 bp | CTCTCCCGGCCACCTCCAGTGAGCTCCATAATCAGTTaGCTTGACTTCCTCCTCTTGTTAGGGGCCGGGGTT | + |
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Preference number: 6 (lower is better) Translates to: LSRPPPVSSIIS*LDFLLLLGAGV Trigger: AACCCCGGCCCCTAACAAGAGGAGGAAGTCAAGCAAACTGATTATGGAGCTCACTGGAGGTGGCCGGGAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090469.8 |
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| CDS CCA 72 bp | TTGAACACAGTGACATGTTTTCCATCTCCACCTGCCTaGTCACCTGATCCGGGCTCTCCAAGCCCTACTGTG | + |
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Preference number: 6 (lower is better) Translates to: LNTVTCFPSPPA*SPDPGSPSPTV Trigger: CACAGTAGGGCTTGGAGAGCCCGGATCAGGTGACCAGGCAGGTGGAGATGGAAAACATGTCACTGTGTTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090469.8 |
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| CDS CCA 72 bp | CCAGGTCAAACTTGGGCATCTGGAAGGTCATGCGTTTaGAGGCCTTCTCATATCCACCGTAGGGCATTGCTG | + |
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Preference number: 6 (lower is better) Translates to: PGQTWASGRSCV*RPSHIHRRALL Trigger: CAGCAATGCCCTACGGTGGATATGAGAAGGCCTCCAAACGCATGACCTTCCAGATGCCCAAGTTTGACCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090469.8 |
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| CDS CCA 72 bp | TCACTCAGCAGAGGCCCCAGGTCAAACTTGGGCATCTaGAAGGTCATGCGTTTGGAGGCCTTCTCATATCCA | + |
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Preference number: 6 (lower is better) Translates to: SLSRGPRSNLGI*KVMRLEAFSYP Trigger: TGGATATGAGAAGGCCTCCAAACGCATGACCTTCCAGATGCCCAAGTTTGACCTGGGGCCTCTGCTGAGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090469.8 |
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| CDS CAA 72 bp | AATTTCTCCACCCGCATCTGCCGTAGCTTGAACATCTaGGAGCCTCGGTTGGTAAGAAGGGACAGCTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: NFSTRICRSLNI*EPRLVRRDSSS Trigger: GGAGGAGCTGTCCCTTCTTACCAACCGAGGCTCCAAGATGTTCAAGCTACGGCAGATGCGGGTGGAGAAATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090469.8 |
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| CDS GCA 72 bp | GGAGTTCAGCTTTGGCACCGTATGCCAGTAGGTCAATaGCAAGTTCCACTTTTTGCTGAGGATCAACCCCCA | + |
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Preference number: 6 (lower is better) Translates to: GVQLWHRMPVGQ*QVPLFAEDQPP Trigger: TGGGGGTTGATCCTCAGCAAAAAGTGGAACTTGGCATTGACCTACTGGCATACGGTGCCAAAGCTGAACTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000090469.8 |
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| CDS CAA 72 bp | GTCCTGTTGAAGGACTTATATTTGGGGAGTTCAGCTTaGGCACCGTATGCCAGTAGGTCAATGCCAAGTTCC | + |
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Preference number: 6 (lower is better) Translates to: VLLKDLYLGSSA*APYASRSMPSS Trigger: GGAACTTGGCATTGACCTACTGGCATACGGTGCCAAAGCTGAACTCCCCAAATATAAGTCCTTCAACAGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090469.8 |
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| CDS CAA 90 bp | GGCATTGCTGTCCTGTTGAAGGACTTATATTTGGGGAGTTCAGCTTaGGCACCGTATGCCAGTAGGTCAATGCCAAGTTCCACTTTTTGC | + |
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Preference number: 6 (lower is better) Translates to: GIAVLLKDLYLGSSA*APYASRSMPSSTFC Trigger: GCAAAAAGTGGAACTTGGCATTGACCTACTGGCATACGGTGCCAAAGCTGAACTCCCCAAATATAAGTCCTTCAACAGGACAGCAATGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090469.8 |
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| CDS CCA 72 bp | TTTTTGCTGAGGATCAACCCCCATGGCCCGATCCCATaGGGAAATATAAGTCTTGAACACAGTGACATGTTT | + |
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Preference number: 6 (lower is better) Translates to: FLLRINPHGPIP*GNISLEHSDMF Trigger: AAACATGTCACTGTGTTCAAGACTTATATTTCCCCATGGGATCGGGCCATGGGGGTTGATCCTCAGCAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000090469.8 |
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