RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MYOM2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000031461

Ensembl transcript IDs: ENSMUST00000033842.4

Found 255 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CATCTGAGCCTCAGTCCACATGCCCATGACCCTGGATGTGCCAGCTaGCCTCTCTCAGCCCACTCTCCACTGCCATTCACTCTCAGCCTC +
Preference number: 1 (lower is better)
Translates to: HLSLSPHAHDPGCAS*PLSAHSPLPFTLSL
Trigger: GAGGCTGAGAGTGAATGGCAGTGGAGAGTGGGCTGAGAGAGGGCAGCTGGCACATCCAGGGTCATGGGCATGTGGACTGAGGCTCAGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
3UTR TCA 90 bp GACTACCACATGCTAGGACCATCTGAGCCTCAGTCCACATGCCCATaGCCCTGGATGTGCCAGCTGCCCTCTCTCAGCCCACTCTCCACT +
Preference number: 1 (lower is better)
Translates to: DYHMLGPSEPQSTCP*PWMCQLPSLSPLST
Trigger: AGTGGAGAGTGGGCTGAGAGAGGGCAGCTGGCACATCCAGGGTCATGGGCATGTGGACTGAGGCTCAGATGGTCCTAGCATGTGGTAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
3UTR TCA 90 bp TGCAAGATCAAAAACCTAGTGTACGGTCGCCAGTCTGGCCACACGTaGCATCACGCCAAACTGGCACCCACTCAGCACAGCATACAACAT +
Preference number: 1 (lower is better)
Translates to: CKIKNLVYGRQSGHT*HHAKLAPTQHSIQH
Trigger: ATGTTGTATGCTGTGCTGAGTGGGTGCCAGTTTGGCGTGATGTCACGTGTGGCCAGACTGGCGACCGTACACTAGGTTTTTGATCTTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
3UTR GCA 90 bp AGAAACATTCGCTTCCCCTCCACACAGATAATTTGCATCGCAAAGTaGAAGATCAAAAACCTAGTGTACGGTCGCCAGTCTGGCCACACG +
Preference number: 1 (lower is better)
Translates to: RNIRFPSTQIICIAK*KIKNLVYGRQSGHT
Trigger: CGTGTGGCCAGACTGGCGACCGTACACTAGGTTTTTGATCTTGCACTTTGCGATGCAAATTATCTGTGTGGAGGGGAAGCGAATGTTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
3UTR-3UTR TCA 90 bp ACATGGTTCATGGTCCACATGCCACAGAAGCATAAAATCCAGAGAAACGGGTTACAGTCCACATGCCCATaGCCCTGGATGTGCCAGCTG +
Preference number: 2 (lower is better)
Translates to: TWFMVHMPQKHKIQRNGLQSTCP*PWMCQL
Trigger: CAGCTGGCACATCCAGGGTCATGGGCATGTGGACTG...TAACCCGTTTCTCTGGATTTTATGCTTCTGTGGCATGTGGACCATGAACCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
3UTR-3UTR GCA 90 bp ACATGGTTCATGGTCCACATGCCACAGAAGCATAAAATCCAGAGAAACGGGTTACCTGGATGTGCCAGCTaGCCTCTCTCAGCCCACTCT +
Preference number: 2 (lower is better)
Translates to: TWFMVHMPQKHKIQRNGLPGCAS*PLSAHS
Trigger: AGAGTGGGCTGAGAGAGGGCAGCTGGCACATCCAGG...TAACCCGTTTCTCTGGATTTTATGCTTCTGTGGCATGTGGACCATGAACCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
3UTR-3UTR GCA 90 bp ACATGGTTCATGGTCCACATGCCACAGAAGCATAAAATCCAGAGAAACGGGTTACAGCCCACTCTCCACTaGCATTCACTCTCAGCCTCA +
Preference number: 2 (lower is better)
Translates to: TWFMVHMPQKHKIQRNGLQPTLH*HSLSAS
Trigger: TGAGGCTGAGAGTGAATGGCAGTGGAGAGTGGGCTG...TAACCCGTTTCTCTGGATTTTATGCTTCTGTGGCATGTGGACCATGAACCATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
3UTR TCA 72 bp ATGCTAGGACCATCTGAGCCTCAGTCCACATGCCCATaGCCCTGGATGTGCCAGCTGCCCTCTCTCAGCCCA +
Preference number: 3 (lower is better)
Translates to: MLGPSEPQSTCP*PWMCQLPSLSP
Trigger: TGGGCTGAGAGAGGGCAGCTGGCACATCCAGGGTCATGGGCATGTGGACTGAGGCTCAGATGGTCCTAGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
3UTR GCA 72 bp TTCAGAAACATTCGCTTCCCCTCCACACAGATAATTTaGATCGCAAAGTGCAAGATCAAAAACCTAGTGTAC +
Preference number: 3 (lower is better)
Translates to: FRNIRFPSTQII*IAKCKIKNLVY
Trigger: GTACACTAGGTTTTTGATCTTGCACTTTGCGATGCAAATTATCTGTGTGGAGGGGAAGCGAATGTTTCTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR CCA 90 bp CCACATGCCCATGACCCTGGATGTGCCAGCTGCCCTCTCTCAGCCCACTCTCCACCTGGCTCCCCTGCCTaGCAGATCAGACTGCCGTCT +
Preference number: 4 (lower is better)
Translates to: PHAHDPGCASCPLSAHSPPGSPA*QIRLPS
Trigger: AGACGGCAGTCTGATCTGCCAGGCAGGGGAGCCAGG...TGGAGAGTGGGCTGAGAGAGGGCAGCTGGCACATCCAGGGTCATGGGCATGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR CCA 90 bp CCACATGCCCATGACCCTGGATGTGCCAGCTGCCCTCTCTCAGCCCACTCTCCACCCCTTCTCCAGGTCTaGCGGTGTCTCCGTTTCGTA +
Preference number: 4 (lower is better)
Translates to: PHAHDPGCASCPLSAHSPPLLQV*RCLRFV
Trigger: TACGAAACGGAGACACCGCCAGACCTGGAGAAGGGG...TGGAGAGTGGGCTGAGAGAGGGCAGCTGGCACATCCAGGGTCATGGGCATGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR CCA 90 bp CCACATGCCCATGACCCTGGATGTGCCAGCTGCCCTCTCTCAGCCCACTCTCCATCATCCTTGTTCAGGTaGCTGAAGGACAGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: PHAHDPGCASCPLSAHSPSSLFR*LKDREA
Trigger: GGCCTCCCTGTCCTTCAGCCACCTGAACAAGGATGA...TGGAGAGTGGGCTGAGAGAGGGCAGCTGGCACATCCAGGGTCATGGGCATGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR CCA 90 bp CAGCACAGCATACAACATCCTAAGACCTCCCTCCCATCTCTCCAGCCCCAGGGCGGCAGGACCAGGTTCTaGATCTGTCCAGGCCTCACA +
Preference number: 4 (lower is better)
Translates to: QHSIQHPKTSLPSLQPQGGRTRF*ICPGLT
Trigger: TGTGAGGCCTGGACAGATCCAGAACCTGGTCCTGCC...GCCCTGGGGCTGGAGAGATGGGAGGGAGGTCTTAGGATGTTGTATGCTGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR TCA 90 bp CAGCACAGCATACAACATCCTAAGACCTCCCTCCCATCTCTCCAGCCCCAGGGCTGGTCACCCTCCGTGTaGACCTCAAATCGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: QHSIQHPKTSLPSLQPQGWSPSV*TSNRSS
Trigger: TGAGGAGCGATTTGAGGTTCACACGGAGGGTGACCA...GCCCTGGGGCTGGAGAGATGGGAGGGAGGTCTTAGGATGTTGTATGCTGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR GCA 90 bp CAGCACAGCATACAACATCCTAAGACCTCCCTCCCATCTCTCCAGCCCCAGGGCAGCTTGGGTTTGGCCTaGTGGGGAGGTGAGATGTCT +
Preference number: 4 (lower is better)
Translates to: QHSIQHPKTSLPSLQPQGSLGLA*WGGEMS
Trigger: AGACATCTCACCTCCCCAGCAGGCCAAACCCAAGCT...GCCCTGGGGCTGGAGAGATGGGAGGGAGGTCTTAGGATGTTGTATGCTGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR CCA 90 bp GATCAAAAACCTAGTGTACGGTCGCCAGTCTGGCCACACGTGACATCACGCCAACTTGCCGCGGGGAGATaGAGGATCCCAGCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: DQKPSVRSPVWPHVTSRQLAAGR*RIPAED
Trigger: GTCCTCAGCTGGGATCCTCCATCTCCCCGCGGCAAG...TTGGCGTGATGTCACGTGTGGCCAGACTGGCGACCGTACACTAGGTTTTTGATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR GCA 90 bp TCAGCCCACTCTCCACTGCCATTCACTCTCAGCCTCACACGAGTCTTAGAGCCTAGGGGAAAGGTGCTCTaGCTGCAGCCAGAATCGGAC +
Preference number: 4 (lower is better)
Translates to: SAHSPLPFTLSLTRVLEPRGKVL*LQPESD
Trigger: GTCCGATTCTGGCTGCAGGCAGAGCACCTTTCCCCT...AGGCTCTAAGACTCGTGTGAGGCTGAGAGTGAATGGCAGTGGAGAGTGGGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR GCA 90 bp TCAGCCCACTCTCCACTGCCATTCACTCTCAGCCTCACACGAGTCTTAGAGCCTACAGATCTGCAGCCATaGCATCTCCTCGCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: SAHSPLPFTLSLTRVLEPTDLQP*HLLAPS
Trigger: GGAGGGAGCGAGGAGATGGCATGGCTGCAGATCTGT...AGGCTCTAAGACTCGTGTGAGGCTGAGAGTGAATGGCAGTGGAGAGTGGGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR CCA 90 bp TCAGCCCACTCTCCACTGCCATTCACTCTCAGCCTCACACGAGTCTTAGAGCCTAATCCGGTACTTGCCTaGCTCCCCTGCCTGGCAGAT +
Preference number: 4 (lower is better)
Translates to: SAHSPLPFTLSLTRVLEPNPVLA*LPCLAD
Trigger: ATCTGCCAGGCAGGGGAGCCAGGCAAGTACCGGATT...AGGCTCTAAGACTCGTGTGAGGCTGAGAGTGAATGGCAGTGGAGAGTGGGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR CCA 90 bp CCACATGCCCATGACCCTGGATGTGCCAGCTGCCCTCTCTCAGCCCACTCTCCATCTTGCCTTCCATTATaGTCACCACGTCTGGTAAGC +
Preference number: 4 (lower is better)
Translates to: PHAHDPGCASCPLSAHSPSCLPL*SPRLVS
Trigger: GCTTACCAGACGTGGTGACCATAATGGAAGGCAAGA...TGGAGAGTGGGCTGAGAGAGGGCAGCTGGCACATCCAGGGTCATGGGCATGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR CCA 90 bp GATCAAAAACCTAGTGTACGGTCGCCAGTCTGGCCACACGTGACATCACGCCAATCGGCCGTCACCCCCTaGATGGTCAGGCTGACATAC +
Preference number: 4 (lower is better)
Translates to: DQKPSVRSPVWPHVTSRQSAVTP*MVRLTY
Trigger: GTATGTCAGCCTGACCATCCAGGGGGTGACGGCCGA...TTGGCGTGATGTCACGTGTGGCCAGACTGGCGACCGTACACTAGGTTTTTGATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR TCA 90 bp CAGCACAGCATACAACATCCTAAGACCTCCCTCCCATCTCTCCAGCCCCAGGGCGGAATCCTTGCACAGTaGAACAGAGCCTCACAGACA +
Preference number: 4 (lower is better)
Translates to: QHSIQHPKTSLPSLQPQGGILAQ*NRASQT
Trigger: TGTCTGTGAGGCTCTGTTTCACTGTGCAAGGATTCC...GCCCTGGGGCTGGAGAGATGGGAGGGAGGTCTTAGGATGTTGTATGCTGTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR TCA 90 bp AGCCCACTCTCCACTGCCATTCACTCTCAGCCTCACACGAGTCTTAGAGCCTTAATGACCTCTGACTCCTaGGAGTTCTCGCTGGTCCCC +
Preference number: 4 (lower is better)
Translates to: SPLSTAIHSQPHTSLRALMTSDS*EFSLVP
Trigger: GGGGACCAGCGAGAACTCTCAGGAGTCAGAGGTCAT...TAAGGCTCTAAGACTCGTGTGAGGCTGAGAGTGAATGGCAGTGGAGAGTGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR GCA 90 bp GATCAAAAACCTAGTGTACGGTCGCCAGTCTGGCCACACGTGACATCACGCCAATTGGCATCATGGCACTaGAGGTCCATGGGTGCCCCA +
Preference number: 4 (lower is better)
Translates to: DQKPSVRSPVWPHVTSRQLASWH*RSMGAP
Trigger: TGGGGCACCCATGGACCTGCAGTGCCATGATGCCAA...TTGGCGTGATGTCACGTGTGGCCAGACTGGCGACCGTACACTAGGTTTTTGATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR TCA 90 bp CACACGAGTCTTAGAGCCTTATGTTCAGAAACATTCGCTTCCCCTCCACACAGACTTGTCCCGAGCCTGTaGCCGGGCCAGGTGGACATT +
Preference number: 4 (lower is better)
Translates to: HTSLRALCSETFASPPHRLVPSL*PGQVDI
Trigger: AATGTCCACCTGGCCCGGTCACAGGCTCGGGACAAG...TCTGTGTGGAGGGGAAGCGAATGTTTCTGAACATAAGGCTCTAAGACTCGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR TCA 90 bp TCAGCCCACTCTCCACTGCCATTCACTCTCAGCCTCACACGAGTCTTAGAGCCTTCGCTTGCAATCTTCTaGGGTCAACAGGGTCAAGGG +
Preference number: 4 (lower is better)
Translates to: SAHSPLPFTLSLTRVLEPSLAIF*GQQGQG
Trigger: CCCTTGACCCTGTTGACCTCAGAAGATTGCAAGCGA...AGGCTCTAAGACTCGTGTGAGGCTGAGAGTGAATGGCAGTGGAGAGTGGGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR CCA 90 bp ATTAGCCTAAAGCAAGACAAAAAGGTAAGCACGTACCATGCTCAAAGGCTCCACGGCACTGCAGGTCCATaGGTGCCCCAGGAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: ISLKQDKKVSTYHAQRLHGTAGP*VPQEPL
Trigger: CAGGGGCTCCTGGGGCACCCATGGACCTGCAGTGCC...GTGGAGCCTTTGAGCATGGTACGTGCTTACCTTTTTGTCTTGCTTTAGGCTAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR CCA 90 bp AGCCCACTCTCCACTGCCATTCACTCTCAGCCTCACACGAGTCTTAGAGCCTTAAAGCCGGATGCCCTCTaGAGTGCAGAGAACCTTCAG +
Preference number: 4 (lower is better)
Translates to: SPLSTAIHSQPHTSLRALKPDAL*SAENLQ
Trigger: CTGAAGGTTCTCTGCACTCCAGAGGGCATCCGGCTT...TAAGGCTCTAAGACTCGTGTGAGGCTGAGAGTGAATGGCAGTGGAGAGTGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR TCA 90 bp GTCCACATGCCACAGAAGCATAAAATCCAGAGAAACGGGTTAAGCCAAGATAGGAAGCGCTGTGGTCGCTaGCTCCACCCCGGGACACAA +
Preference number: 4 (lower is better)
Translates to: VHMPQKHKIQRNGLSQDRKRCGR*LHPGTQ
Trigger: TTGTGTCCCGGGGTGGAGTCAGCGACCACAGCGCTT...CCTATCTTGGCTTAACCCGTTTCTCTGGATTTTATGCTTCTGTGGCATGTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR TCA 90 bp GTCCACATGCCACAGAAGCATAAAATCCAGAGAAACGGGTTAAGCCAAGATAGGCCGCCGTTTGAGCATTaGCCCTCTGCCAGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: VHMPQKHKIQRNGLSQDRPPFEH*PSASCH
Trigger: GTGGCAGCTGGCAGAGGGTCAATGCTCAAACGGCGG...CCTATCTTGGCTTAACCCGTTTCTCTGGATTTTATGCTTCTGTGGCATGTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR TCA 90 bp TCAGCCCACTCTCCACTGCCATTCACTCTCAGCCTCACACGAGTCTTAGAGCCTCAAACACAGTGCAGGTaGGGTTCAAGGTCTTGCCTT +
Preference number: 4 (lower is better)
Translates to: SAHSPLPFTLSLTRVLEPQTQCR*GSRSCL
Trigger: AAGGCAAGACCTTGAACCTCACCTGCACTGTGTTTG...AGGCTCTAAGACTCGTGTGAGGCTGAGAGTGAATGGCAGTGGAGAGTGGGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR TCA 90 bp GATCAAAAACCTAGTGTACGGTCGCCAGTCTGGCCACACGTGACATCACGCCAACCAAGAAGTGCTCGCTaGGCTCAATGTCCTTGTCGT +
Preference number: 4 (lower is better)
Translates to: DQKPSVRSPVWPHVTSRQPRSAR*AQCPCR
Trigger: ACGACAAGGACATTGAGCTCAGCGAGCACTTCTTGG...TTGGCGTGATGTCACGTGTGGCCAGACTGGCGACCGTACACTAGGTTTTTGATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR GCA 90 bp AGCCCACTCTCCACTGCCATTCACTCTCAGCCTCACACGAGTCTTAGAGCCTTAGCCGCGATTCTTCTCTaGAAAAGCAGCAGCCTTGAG +
Preference number: 4 (lower is better)
Translates to: SPLSTAIHSQPHTSLRALAAILL*KSSSLE
Trigger: CTCAAGGCTGCTGCTTTTGCAGAGAAGAATCGCGGC...TAAGGCTCTAAGACTCGTGTGAGGCTGAGAGTGAATGGCAGTGGAGAGTGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR CCA 90 bp AGCCCACTCTCCACTGCCATTCACTCTCAGCCTCACACGAGTCTTAGAGCCTTAAGCCCCTGTGACCAGTaGGTCAGCATCTCTGACAAA +
Preference number: 4 (lower is better)
Translates to: SPLSTAIHSQPHTSLRALSPCDQ*VSISDK
Trigger: TTTGTCAGAGATGCTGACCCACTGGTCACAGGGGCT...TAAGGCTCTAAGACTCGTGTGAGGCTGAGAGTGAATGGCAGTGGAGAGTGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR CCA 90 bp AGCCTCACACGAGTCTTAGAGCCTTATGTTCAGAAACATTCGCTTCCCCTCCACCTGACCTCTGAGGCCTaGACATTAGTGGGAGGCCCT +
Preference number: 4 (lower is better)
Translates to: SLTRVLEPYVQKHSLPLHLTSEA*TLVGGP
Trigger: AGGGCCTCCCACTAATGTCCAGGCCTCAGAGGTCAG...GTGGAGGGGAAGCGAATGTTTCTGAACATAAGGCTCTAAGACTCGTGTGAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR TCA 90 bp AGCCTCACACGAGTCTTAGAGCCTTATGTTCAGAAACATTCGCTTCCCCTCCACATGGAGGATCCCAGCTaGGGACAACGTAGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: SLTRVLEPYVQKHSLPLHMEDPS*GQRSSC
Trigger: GCAGGAACTACGTTGTCCTCAGCTGGGATCCTCCAT...GTGGAGGGGAAGCGAATGTTTCTGAACATAAGGCTCTAAGACTCGTGTGAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR TCA 90 bp AACTATCCAGACTACCACATGCTAGGACCATCTGAGCCTCAGTCCACATGCCCAAGGTGGTGTTATCTCTaGTGGGTCACTCAGGCCATG +
Preference number: 4 (lower is better)
Translates to: NYPDYHMLGPSEPQSTCPRWCYL*WVTQAM
Trigger: CATGGCCTGAGTGACCCATCAGAGATAACACCACCT...TGGGCATGTGGACTGAGGCTCAGATGGTCCTAGCATGTGGTAGTCTGGATAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR TCA 90 bp AACTATCCAGACTACCACATGCTAGGACCATCTGAGCCTCAGTCCACATGCCCAGACCTTGATGACCTCTaGCTCCTGAGAGTTCTCGCT +
Preference number: 4 (lower is better)
Translates to: NYPDYHMLGPSEPQSTCPDLDDL*LLRVLA
Trigger: AGCGAGAACTCTCAGGAGTCAGAGGTCATCAAGGTC...TGGGCATGTGGACTGAGGCTCAGATGGTCCTAGCATGTGGTAGTCTGGATAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR GCA 90 bp AACTATCCAGACTACCACATGCTAGGACCATCTGAGCCTCAGTCCACATGCCCAACATTAAGGGATCCTTaGCGCGGGGAGATGGAGGAT +
Preference number: 4 (lower is better)
Translates to: NYPDYHMLGPSEPQSTCPTLRDP*RGEMED
Trigger: ATCCTCCATCTCCCCGCGGCAAGGATCCCTTAATGT...TGGGCATGTGGACTGAGGCTCAGATGGTCCTAGCATGTGGTAGTCTGGATAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR GCA 90 bp AGCCTCACACGAGTCTTAGAGCCTTATGTTCAGAAACATTCGCTTCCCCTCCACACCCGGAAGATGTACTaGTCACCGGTGGTTAAGCCG +
Preference number: 4 (lower is better)
Translates to: SLTRVLEPYVQKHSLPLHTRKMY*SPVVKP
Trigger: CGGCTTAACCACCGGTGAGCAGTACATCTTCCGGGT...GTGGAGGGGAAGCGAATGTTTCTGAACATAAGGCTCTAAGACTCGTGTGAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR CCA 90 bp AACTATCCAGACTACCACATGCTAGGACCATCTGAGCCTCAGTCCACATGCCCAAAGGACAGGGAGGCCTaGCCTTCTCCAAAGAACATC +
Preference number: 4 (lower is better)
Translates to: NYPDYHMLGPSEPQSTCPKDREA*PSPKNI
Trigger: GATGTTCTTTGGAGAAGGCCAGGCCTCCCTGTCCTT...TGGGCATGTGGACTGAGGCTCAGATGGTCCTAGCATGTGGTAGTCTGGATAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR CCA 90 bp AACTATCCAGACTACCACATGCTAGGACCATCTGAGCCTCAGTCCACATGCCCAATGTCTTTGTATTCCTaGAGGCAAGCACCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: NYPDYHMLGPSEPQSTCPMSLYS*RQAPGQ
Trigger: CTGGCCGGGTGCTTGCCTCCAGGAATACAAAGACAT...TGGGCATGTGGACTGAGGCTCAGATGGTCCTAGCATGTGGTAGTCTGGATAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR CCA 90 bp AGCCTCACACGAGTCTTAGAGCCTTATGTTCAGAAACATTCGCTTCCCCTCCACCCCAGGGTCATGGAGTaGCCATCACAGTTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: SLTRVLEPYVQKHSLPLHPRVME*PSQLRR
Trigger: CCTTCTCAACTGTGATGGCCACTCCATGACCCTGGG...GTGGAGGGGAAGCGAATGTTTCTGAACATAAGGCTCTAAGACTCGTGTGAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR CCA 90 bp ATTAGCCTAAAGCAAGACAAAAAGGTAAGCACGTACCATGCTCAAAGGCTCCACCTCACTGGGATCCGATaGCTGCCCGATCCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: ISLKQDKKVSTYHAQRLHLTGIR*LPDPSQ
Trigger: CTGGCTGGGATCGGGCAGCCATCGGATCCCAGTGAG...GTGGAGCCTTTGAGCATGGTACGTGCTTACCTTTTTGTCTTGCTTTAGGCTAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR CCA 90 bp AGCCTCACACGAGTCTTAGAGCCTTATGTTCAGAAACATTCGCTTCCCCTCCACCCTTGTCCTTCTCTGTaGGCTCACAGATCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: SLTRVLEPYVQKHSLPLHPCPSL*AHRSAA
Trigger: GGCTGCAGATCTGTGAGCCCACAGAGAAGGACAAGG...GTGGAGGGGAAGCGAATGTTTCTGAACATAAGGCTCTAAGACTCGTGTGAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR TCA 90 bp GTCCACATGCCACAGAAGCATAAAATCCAGAGAAACGGGTTAAGCCAAGATAGGGTTCCTGCTGACCTCTaGGGCCTGGACATTAGTGGG +
Preference number: 4 (lower is better)
Translates to: VHMPQKHKIQRNGLSQDRVPADL*GLDISG
Trigger: CCCACTAATGTCCAGGCCTCAGAGGTCAGCAGGAAC...CCTATCTTGGCTTAACCCGTTTCTCTGGATTTTATGCTTCTGTGGCATGTGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR TCA 90 bp CAGATAATTTGCATCGCAAAGTGCAAGATCAAAAACCTAGTGTACGGTCGCCAGGAGAACCTTCAGGGGTaGGGCAGAGGCTCCACACAC +
Preference number: 4 (lower is better)
Translates to: QIICIAKCKIKNLVYGRQENLQG*GRGSTH
Trigger: GTGTGTGGAGCCTCTGCCTCACCCCTGAAGGTTCTC...CTGGCGACCGTACACTAGGTTTTTGATCTTGCACTTTGCGATGCAAATTATCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR TCA 90 bp ATTAGCCTAAAGCAAGACAAAAAGGTAAGCACGTACCATGCTCAAAGGCTCCACGGCCTGCTGGGGAGGTaGGATGTCTGGGATCTTCTC +
Preference number: 4 (lower is better)
Translates to: ISLKQDKKVSTYHAQRLHGLLGR*DVWDLL
Trigger: GAGAAGATCCCAGACATCTCACCTCCCCAGCAGGCC...GTGGAGCCTTTGAGCATGGTACGTGCTTACCTTTTTGTCTTGCTTTAGGCTAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR GCA 90 bp ACATGGTTCATGGTCCACATGCCACAGAAGCATAAAATCCAGAGAAACGGGTTAGCTTTGCACAGAGCCTaGAGGTCATCGCCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: TWFMVHMPQKHKIQRNGLALHRA*RSSPQQ
Trigger: CTGCTGGGGCGATGACCTGCAGGCTCTGTGCAAAGC...TAACCCGTTTCTCTGGATTTTATGCTTCTGTGGCATGTGGACCATGAACCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR GCA 90 bp CAGCACAGCATACAACATCCTAAGACCTCCCTCCCATCTCTCCAGCCCCAGGGCGTCATCTTTCAAGGTTaGTTTGTATTCACCATGGTC +
Preference number: 4 (lower is better)
Translates to: QHSIQHPKTSLPSLQPQGVIFQG*FVFTMV
Trigger: GACCATGGTGAATACAAAGCAACCTTGAAAGATGAC...GCCCTGGGGCTGGAGAGATGGGAGGGAGGTCTTAGGATGTTGTATGCTGTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR CCA 90 bp AGCCCACTCTCCACTGCCATTCACTCTCAGCCTCACACGAGTCTTAGAGCCTTAGGGTTTGTGGTTGCATaGTTCCCACATGTTTGTTCC +
Preference number: 4 (lower is better)
Translates to: SPLSTAIHSQPHTSLRALGFVVA*FPHVCS
Trigger: GGAACAAACATGTGGGAACCATGCAACCACAAACCC...TAAGGCTCTAAGACTCGTGTGAGGCTGAGAGTGAATGGCAGTGGAGAGTGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR TCA 90 bp AGCCTCACACGAGTCTTAGAGCCTTATGTTCAGAAACATTCGCTTCCCCTCCACCTTAAAGTACAGCTTTaGGTGGTCACCCTCCGTGTG +
Preference number: 4 (lower is better)
Translates to: SLTRVLEPYVQKHSLPLHLKVQL*VVTLRV
Trigger: CACACGGAGGGTGACCACTCAAAGCTGTACTTTAAG...GTGGAGGGGAAGCGAATGTTTCTGAACATAAGGCTCTAAGACTCGTGTGAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR TCA 90 bp CAGATAATTTGCATCGCAAAGTGCAAGATCAAAAACCTAGTGTACGGTCGCCAGAGGTGGAAGCTGGGATaGGCTTGGGTTTGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: QIICIAKCKIKNLVYGRQRWKLG*AWVWPA
Trigger: AGCAGGCCAAACCCAAGCTCATCCCAGCTTCCACCT...CTGGCGACCGTACACTAGGTTTTTGATCTTGCACTTTGCGATGCAAATTATCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR CCA 90 bp TCAGCCCACTCTCCACTGCCATTCACTCTCAGCCTCACACGAGTCTTAGAGCCTCTCCAAAGAACATCTTaGTCCACTTGGACTCTTTCA +
Preference number: 4 (lower is better)
Translates to: SAHSPLPFTLSLTRVLEPLQRTS*STWTLS
Trigger: TGAAAGAGTCCAAGTGGACCAAGATGTTCTTTGGAG...AGGCTCTAAGACTCGTGTGAGGCTGAGAGTGAATGGCAGTGGAGAGTGGGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR CCA 90 bp CGCTTCCCCTCCACACAGATAATTTGCATCGCAAAGTGCAAGATCAAAAACCTATTGGGTTTGGCCTGCTaGGGAGGTGAGATGTCTGGG +
Preference number: 4 (lower is better)
Translates to: RFPSTQIICIAKCKIKNLLGLAC*GGEMSG
Trigger: CCCAGACATCTCACCTCCCCAGCAGGCCAAACCCAA...TAGGTTTTTGATCTTGCACTTTGCGATGCAAATTATCTGTGTGGAGGGGAAGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR TCA 90 bp CAGATAATTTGCATCGCAAAGTGCAAGATCAAAAACCTAGTGTACGGTCGCCAGAACTTCCTCCTCTTCTaGTGCGCTCACCCGCTTTGC +
Preference number: 4 (lower is better)
Translates to: QIICIAKCKIKNLVYGRQNFLLF*CAHPLC
Trigger: GCAAAGCGGGTGAGCGCATCAGAAGAGGAGGAAGTT...CTGGCGACCGTACACTAGGTTTTTGATCTTGCACTTTGCGATGCAAATTATCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR TCA 90 bp CGCTTCCCCTCCACACAGATAATTTGCATCGCAAAGTGCAAGATCAAAAACCTACAACGTAGTTCCTGCTaGCCTCTGAGGCCTGGACAT +
Preference number: 4 (lower is better)
Translates to: RFPSTQIICIAKCKIKNLQRSSC*PLRPGH
Trigger: ATGTCCAGGCCTCAGAGGTCAGCAGGAACTACGTTG...TAGGTTTTTGATCTTGCACTTTGCGATGCAAATTATCTGTGTGGAGGGGAAGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR TCA 90 bp CACACGAGTCTTAGAGCCTTATGTTCAGAAACATTCGCTTCCCCTCCACACAGAGAGCTTTCCACAGAATaGCCAGAGAAGTGTCTCGGA +
Preference number: 4 (lower is better)
Translates to: HTSLRALCSETFASPPHRELSTE*PEKCLG
Trigger: TCCGAGACACTTCTCTGGTCATTCTGTGGAAAGCTC...TCTGTGTGGAGGGGAAGCGAATGTTTCTGAACATAAGGCTCTAAGACTCGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR GCA 90 bp GTCCACATGCCACAGAAGCATAAAATCCAGAGAAACGGGTTAAGCCAAGATAGGATCCAGAAACAGGACTaGTGCCCGAGTAAACGGGAG +
Preference number: 4 (lower is better)
Translates to: VHMPQKHKIQRNGLSQDRIQKQD*CPSKRE
Trigger: CTCCCGTTTACTCGGGCAGCAGTCCTGTTTCTGGAT...CCTATCTTGGCTTAACCCGTTTCTCTGGATTTTATGCTTCTGTGGCATGTGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR GCA 90 bp AGCCTCACACGAGTCTTAGAGCCTTATGTTCAGAAACATTCGCTTCCCCTCCACTTACACCAGGTGAACTaGGAGGCATCTGTCATTTCC +
Preference number: 4 (lower is better)
Translates to: SLTRVLEPYVQKHSLPLHLHQVN*EASVIS
Trigger: GGAAATGACAGATGCCTCGCAGTTCACCTGGTGTAA...GTGGAGGGGAAGCGAATGTTTCTGAACATAAGGCTCTAAGACTCGTGTGAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR CCA 90 bp AGCCTCACACGAGTCTTAGAGCCTTATGTTCAGAAACATTCGCTTCCCCTCCACATTAGTGGGAGGCCCTaGAATCTGAACATCACCTTC +
Preference number: 4 (lower is better)
Translates to: SLTRVLEPYVQKHSLPLHISGRP*NLNITF
Trigger: GAAGGTGATGTTCAGATTCCAGGGCCTCCCACTAAT...GTGGAGGGGAAGCGAATGTTTCTGAACATAAGGCTCTAAGACTCGTGTGAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR TCA 90 bp AGCCTCACACGAGTCTTAGAGCCTTATGTTCAGAAACATTCGCTTCCCCTCCACATCTTGGCCTCTTTGTaGTACCAGCTGACCTTCATT +
Preference number: 4 (lower is better)
Translates to: SLTRVLEPYVQKHSLPLHILASL*YQLTFI
Trigger: AATGAAGGTCAGCTGGTATCACAAAGAGGCCAAGAT...GTGGAGGGGAAGCGAATGTTTCTGAACATAAGGCTCTAAGACTCGTGTGAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR GCA 90 bp CGCTTCCCCTCCACACAGATAATTTGCATCGCAAAGTGCAAGATCAAAAACCTAGCCTCACACTTGAAATaGTCACTGGGATCCGATGGC +
Preference number: 4 (lower is better)
Translates to: RFPSTQIICIAKCKIKNLASHLK*SLGSDG
Trigger: GCCATCGGATCCCAGTGAGCATTTCAAGTGTGAGGC...TAGGTTTTTGATCTTGCACTTTGCGATGCAAATTATCTGTGTGGAGGGGAAGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR GCA 90 bp CGCTTCCCCTCCACACAGATAATTTGCATCGCAAAGTGCAAGATCAAAAACCTAACCCAAGGTAGATGTTaGCCTCCTCATCCACACCAG +
Preference number: 4 (lower is better)
Translates to: RFPSTQIICIAKCKIKNLTQGRC*PPHPHQ
Trigger: CTGGTGTGGATGAGGAGGGCAACATCTACCTTGGGT...TAGGTTTTTGATCTTGCACTTTGCGATGCAAATTATCTGTGTGGAGGGGAAGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR GCA 90 bp GATCAAAAACCTAGTGTACGGTCGCCAGTCTGGCCACACGTGACATCACGCCAATCACATTTAATTCTGTaGGTGTCACTGTCAGAAACC +
Preference number: 4 (lower is better)
Translates to: DQKPSVRSPVWPHVTSRQSHLIL*VSLSET
Trigger: GGTTTCTGACAGTGACACGCACAGAATTAAATGTGA...TTGGCGTGATGTCACGTGTGGCCAGACTGGCGACCGTACACTAGGTTTTTGATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR CCA 90 bp CACACGAGTCTTAGAGCCTTATGTTCAGAAACATTCGCTTCCCCTCCACACAGAAGTAGTGGTGTTGGGTaGTTTCCAAGTCACGATGAC +
Preference number: 4 (lower is better)
Translates to: HTSLRALCSETFASPPHRSSGVG*FPSHDD
Trigger: GTCATCGTGACTTGGAAACCACCCAACACCACTACT...TCTGTGTGGAGGGGAAGCGAATGTTTCTGAACATAAGGCTCTAAGACTCGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR CCA 90 bp ACATGGTTCATGGTCCACATGCCACAGAAGCATAAAATCCAGAGAAACGGGTTATCCGCATGTGCTCACTaGAGGAGATCTTGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: TWFMVHMPQKHKIQRNGLSACAH*RRSWPL
Trigger: AAGAGGCCAAGATCTCCTCCAGTGAGCACATGCGGA...TAACCCGTTTCTCTGGATTTTATGCTTCTGTGGCATGTGGACCATGAACCATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR CCA 90 bp CGCTTCCCCTCCACACAGATAATTTGCATCGCAAAGTGCAAGATCAAAAACCTATCCAGCGAGCGTTGGTaGCTGTCTTTGCCATCGAAA +
Preference number: 4 (lower is better)
Translates to: RFPSTQIICIAKCKIKNLSSERW*LSLPSK
Trigger: TTTCGATGGCAAAGACAGCCACCAACGCTCGCTGGA...TAGGTTTTTGATCTTGCACTTTGCGATGCAAATTATCTGTGTGGAGGGGAAGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR CCA 90 bp ATTAGCCTAAAGCAAGACAAAAAGGTAAGCACGTACCATGCTCAAAGGCTCCACCTCTGGGAGGATGACTaGGTGGTTGCTTGCTTTTTC +
Preference number: 4 (lower is better)
Translates to: ISLKQDKKVSTYHAQRLHLWEDD*VVACFF
Trigger: GAAAAAGCAAGCAACCACCCAGTCATCCTCCCAGAG...GTGGAGCCTTTGAGCATGGTACGTGCTTACCTTTTTGTCTTGCTTTAGGCTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR CCA 90 bp ACATGGTTCATGGTCCACATGCCACAGAAGCATAAAATCCAGAGAAACGGGTTACTACTGCTGAATAGGTaGCGGTGTCCTCAAAGTTGG +
Preference number: 4 (lower is better)
Translates to: TWFMVHMPQKHKIQRNGLLLLNR*RCPQSW
Trigger: CCAACTTTGAGGACACCGCCACCTATTCAGCAGTAG...TAACCCGTTTCTCTGGATTTTATGCTTCTGTGGCATGTGGACCATGAACCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR CCA 90 bp CGCTTCCCCTCCACACAGATAATTTGCATCGCAAAGTGCAAGATCAAAAACCTAGTCCTCTTCATGCTTTaGTCTGTCCCACTGGACTAC +
Preference number: 4 (lower is better)
Translates to: RFPSTQIICIAKCKIKNLVLFML*SVPLDY
Trigger: GTAGTCCAGTGGGACAGACCAAAGCATGAAGAGGAC...TAGGTTTTTGATCTTGCACTTTGCGATGCAAATTATCTGTGTGGAGGGGAAGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR CCA 90 bp ATTAGCCTAAAGCAAGACAAAAAGGTAAGCACGTACCATGCTCAAAGGCTCCACTGTACTGCTCACCGGTaGTTAAGCCGTGTACCACAA +
Preference number: 4 (lower is better)
Translates to: ISLKQDKKVSTYHAQRLHCTAHR*LSRVPQ
Trigger: TTGTGGTACACGGCTTAACCACCGGTGAGCAGTACA...GTGGAGCCTTTGAGCATGGTACGTGCTTACCTTTTTGTCTTGCTTTAGGCTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR CCA 90 bp AGCCCACTCTCCACTGCCATTCACTCTCAGCCTCACACGAGTCTTAGAGCCTTAGTGATGACTGATTCTTaGCTTTTCCATCTTGAATCT +
Preference number: 4 (lower is better)
Translates to: SPLSTAIHSQPHTSLRALVMTDS*LFHLES
Trigger: AGATTCAAGATGGAAAAGCCAAGAATCAGTCATCAC...TAAGGCTCTAAGACTCGTGTGAGGCTGAGAGTGAATGGCAGTGGAGAGTGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR TCA 90 bp ATTATTATTAGCCTAAAGCAAGACAAAAAGGTAAGCACGTACCATGCTCAAAGGGCCCCAGCAGAGCTCTaGCTGGAAGCTCTCTTCGAA +
Preference number: 4 (lower is better)
Translates to: IIISLKQDKKVSTYHAQRAPAEL*LEALFE
Trigger: TTCGAAGAGAGCTTCCAGTCAGAGCTCTGCTGGGGC...CCTTTGAGCATGGTACGTGCTTACCTTTTTGTCTTGCTTTAGGCTAATAATAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR TCA 90 bp GTCCACATGCCACAGAAGCATAAAATCCAGAGAAACGGGTTAAGCCAAGATAGGAGCACCAGTGATGACTaGTTCTTGGCTTTTCCATCT +
Preference number: 4 (lower is better)
Translates to: VHMPQKHKIQRNGLSQDRSTSDD*FLAFPS
Trigger: AGATGGAAAAGCCAAGAATCAGTCATCACTGGTGCT...CCTATCTTGGCTTAACCCGTTTCTCTGGATTTTATGCTTCTGTGGCATGTGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR CCA 90 bp AGCCTCACACGAGTCTTAGAGCCTTATGTTCAGAAACATTCGCTTCCCCTCCACTTTTTCAATGCATATTaGTCCAGGAGGTACCTGGTT +
Preference number: 4 (lower is better)
Translates to: SLTRVLEPYVQKHSLPLHFFNAY*SRRYLV
Trigger: AACCAGGTACCTCCTGGACCAATATGCATTGAAAAA...GTGGAGGGGAAGCGAATGTTTCTGAACATAAGGCTCTAAGACTCGTGTGAGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR CCA 90 bp ACATGGTTCATGGTCCACATGCCACAGAAGCATAAAATCCAGAGAAACGGGTTAGGGAGGATGACTGGGTaGTTGCTTGCTTTTTCAATG +
Preference number: 4 (lower is better)
Translates to: TWFMVHMPQKHKIQRNGLGRMTG*LLAFSM
Trigger: CATTGAAAAAGCAAGCAACCACCCAGTCATCCTCCC...TAACCCGTTTCTCTGGATTTTATGCTTCTGTGGCATGTGGACCATGAACCATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR CCA 90 bp ATTATTATTAGCCTAAAGCAAGACAAAAAGGTAAGCACGTACCATGCTCAAAGGAGGTCCAGCGAGCGTTaGTGGCTGTCTTTGCCATCG +
Preference number: 4 (lower is better)
Translates to: IIISLKQDKKVSTYHAQRRSSER*WLSLPS
Trigger: CGATGGCAAAGACAGCCACCAACGCTCGCTGGACCT...CCTTTGAGCATGGTACGTGCTTACCTTTTTGTCTTGCTTTAGGCTAATAATAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR TCA 90 bp CACACGAGTCTTAGAGCCTTATGTTCAGAAACATTCGCTTCCCCTCCACACAGAAAATATTCAGCAAAATaGGGGCCTTGTTTCCGTAGA +
Preference number: 4 (lower is better)
Translates to: HTSLRALCSETFASPPHRKYSAK*GPCFRR
Trigger: TCTACGGAAACAAGGCCCTCATTTTGCTGAATATTT...TCTGTGTGGAGGGGAAGCGAATGTTTCTGAACATAAGGCTCTAAGACTCGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR TCA 90 bp GTCCACATGCCACAGAAGCATAAAATCCAGAGAAACGGGTTAAGCCAAGATAGGCTTCACACTCTTCAGTaGCATCCCAGTGCAAATATT +
Preference number: 4 (lower is better)
Translates to: VHMPQKHKIQRNGLSQDRLHTLQ*HPSANI
Trigger: AATATTTGCACTGGGATGTCACTGAAGAGTGTGAAG...CCTATCTTGGCTTAACCCGTTTCTCTGGATTTTATGCTTCTGTGGCATGTGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR GCA 90 bp ACATGGTTCATGGTCCACATGCCACAGAAGCATAAAATCCAGAGAAACGGGTTATTGTCTTCCACCGTCTaGTCCATGAAGTACTTGTCT +
Preference number: 4 (lower is better)
Translates to: TWFMVHMPQKHKIQRNGLLSSTV*SMKYLS
Trigger: AGACAAGTACTTCATGGAGCAGACGGTGGAAGACAA...TAACCCGTTTCTCTGGATTTTATGCTTCTGTGGCATGTGGACCATGAACCATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR GCA 90 bp CAGATAATTTGCATCGCAAAGTGCAAGATCAAAAACCTAGTGTACGGTCGCCAGGTTGGTGGCTGTCTTTaGCATCGAAAATCTCAAACG +
Preference number: 4 (lower is better)
Translates to: QIICIAKCKIKNLVYGRQVGGCL*HRKSQT
Trigger: CGTTTGAGATTTTCGATGGCAAAGACAGCCACCAAC...CTGGCGACCGTACACTAGGTTTTTGATCTTGCACTTTGCGATGCAAATTATCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR CCA 90 bp ATTAGCCTAAAGCAAGACAAAAAGGTAAGCACGTACCATGCTCAAAGGCTCCACTATCCAATGGGTTTGTaGTTGCATGGTTCCCACATG +
Preference number: 4 (lower is better)
Translates to: ISLKQDKKVSTYHAQRLHYPMGL*LHGSHM
Trigger: CATGTGGGAACCATGCAACCACAAACCCATTGGATA...GTGGAGCCTTTGAGCATGGTACGTGCTTACCTTTTTGTCTTGCTTTAGGCTAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR TCA 90 bp ATTATTATTAGCCTAAAGCAAGACAAAAAGGTAAGCACGTACCATGCTCAAAGGCATTCGGTCTTCAAATaGGTGTCTCTCCCACGCCAG +
Preference number: 4 (lower is better)
Translates to: IIISLKQDKKVSTYHAQRHSVFK*VSLPRQ
Trigger: CTGGCGTGGGAGAGACACTCATTTGAAGACCGAATG...CCTTTGAGCATGGTACGTGCTTACCTTTTTGTCTTGCTTTAGGCTAATAATAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR TCA 90 bp GTCCACATGCCACAGAAGCATAAAATCCAGAGAAACGGGTTAAGCCAAGATAGGAGAAATTCCTTCCTTTaGAATTCAGCCTCTTCTAGG +
Preference number: 4 (lower is better)
Translates to: VHMPQKHKIQRNGLSQDRRNSFL*NSASSR
Trigger: CCTAGAAGAGGCTGAATTTCAAAGGAAGGAATTTCT...CCTATCTTGGCTTAACCCGTTTCTCTGGATTTTATGCTTCTGTGGCATGTGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR GCA 90 bp ACATGGTTCATGGTCCACATGCCACAGAAGCATAAAATCCAGAGAAACGGGTTAGACTGGGTGGTTGCTTaGTTTTTCAATGCATATTGG +
Preference number: 4 (lower is better)
Translates to: TWFMVHMPQKHKIQRNGLDWVVA*FFNAYW
Trigger: CCAATATGCATTGAAAAAGCAAGCAACCACCCAGTC...TAACCCGTTTCTCTGGATTTTATGCTTCTGTGGCATGTGGACCATGAACCATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR GCA 90 bp ATTATTATTAGCCTAAAGCAAGACAAAAAGGTAAGCACGTACCATGCTCAAAGGAGCAGGTCCTCTTCATaGTTTGGTCTGTCCCACTGG +
Preference number: 4 (lower is better)
Translates to: IIISLKQDKKVSTYHAQRSRSSS*FGLSHW
Trigger: CCAGTGGGACAGACCAAAGCATGAAGAGGACCTGCT...CCTTTGAGCATGGTACGTGCTTACCTTTTTGTCTTGCTTTAGGCTAATAATAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR GCA 90 bp ATTAGCCTAAAGCAAGACAAAAAGGTAAGCACGTACCATGCTCAAAGGCTCCACTATCTCATTGCTCAGTaGCATCAAACGCTCAAGTTC +
Preference number: 4 (lower is better)
Translates to: ISLKQDKKVSTYHAQRLHYLIAQ*HQTLKF
Trigger: GAACTTGAGCGTTTGATGGCACTGAGCAATGAGATA...GTGGAGCCTTTGAGCATGGTACGTGCTTACCTTTTTGTCTTGCTTTAGGCTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR CCA 90 bp ATTATTATTAGCCTAAAGCAAGACAAAAAGGTAAGCACGTACCATGCTCAAAGGCAGCAGAGCTCTGACTaGAAGCTCTCTTCGAAGAGG +
Preference number: 4 (lower is better)
Translates to: IIISLKQDKKVSTYHAQRQQSSD*KLSSKR
Trigger: CCTCTTCGAAGAGAGCTTCCAGTCAGAGCTCTGCTG...CCTTTGAGCATGGTACGTGCTTACCTTTTTGTCTTGCTTTAGGCTAATAATAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR GCA 90 bp ATTAGCCTAAAGCAAGACAAAAAGGTAAGCACGTACCATGCTCAAAGGCTCCACTGCTTGCTTTTTCAATaGATATTGGTCCAGGAGGTA +
Preference number: 4 (lower is better)
Translates to: ISLKQDKKVSTYHAQRLHCLLFQ*ILVQEV
Trigger: TACCTCCTGGACCAATATGCATTGAAAAAGCAAGCA...GTGGAGCCTTTGAGCATGGTACGTGCTTACCTTTTTGTCTTGCTTTAGGCTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR CCA 90 bp ATTAGCCTAAAGCAAGACAAAAAGGTAAGCACGTACCATGCTCAAAGGCTCCACAAACAGTTTCCCTCTTaGTGTTTGCAACCTTACAGA +
Preference number: 4 (lower is better)
Translates to: ISLKQDKKVSTYHAQRLHKQFPS*CLQPYR
Trigger: TCTGTAAGGTTGCAAACACCAAGAGGGAAACTGTTT...GTGGAGCCTTTGAGCATGGTACGTGCTTACCTTTTTGTCTTGCTTTAGGCTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR GCA 90 bp ATTATTATTAGCCTAAAGCAAGACAAAAAGGTAAGCACGTACCATGCTCAAAGGATCTTCACCAAGAAGTaGTCGCTGAGCTCAATGTCC +
Preference number: 4 (lower is better)
Translates to: IIISLKQDKKVSTYHAQRIFTKK*SLSSMS
Trigger: GGACATTGAGCTCAGCGAGCACTTCTTGGTGAAGAT...CCTTTGAGCATGGTACGTGCTTACCTTTTTGTCTTGCTTTAGGCTAATAATAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR TCA 90 bp ATTATTATTAGCCTAAAGCAAGACAAAAAGGTAAGCACGTACCATGCTCAAAGGATTTATTCTTCACGTTaGTGCTGTACTTGCCCGAGT +
Preference number: 4 (lower is better)
Translates to: IIISLKQDKKVSTYHAQRIYSSR*CCTCPS
Trigger: ACTCGGGCAAGTACAGCATCAACGTGAAGAATAAAT...CCTTTGAGCATGGTACGTGCTTACCTTTTTGTCTTGCTTTAGGCTAATAATAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR CAA 90 bp CCACATGCCCATGACCCTGGATGTGCCAGCTGCCCTCTCTCAGCCCACTCTCCAAGATCTCACCGCCGTTaGAGCATTGACCCTCTGCCA +
Preference number: 5 (lower is better)
Translates to: PHAHDPGCASCPLSAHSPRSHRR*SIDPLP
Trigger: TGGCAGAGGGTCAATGCTCAAACGGCGGTGAGATCT...TGGAGAGTGGGCTGAGAGAGGGCAGCTGGCACATCCAGGGTCATGGGCATGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR CAA 90 bp CAGCACAGCATACAACATCCTAAGACCTCCCTCCCATCTCTCCAGCCCCAGGGCGAGGTCCAGCGAGCGTaGGTGGCTGTCTTTGCCATC +
Preference number: 5 (lower is better)
Translates to: QHSIQHPKTSLPSLQPQGEVQRA*VAVFAI
Trigger: GATGGCAAAGACAGCCACCAACGCTCGCTGGACCTC...GCCCTGGGGCTGGAGAGATGGGAGGGAGGTCTTAGGATGTTGTATGCTGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR CAA 90 bp CAGCACAGCATACAACATCCTAAGACCTCCCTCCCATCTCTCCAGCCCCAGGGCGAAGCTGGGATGAGCTaGGGTTTGGCCTGCTGGGGA +
Preference number: 5 (lower is better)
Translates to: QHSIQHPKTSLPSLQPQGEAGMS*GLACWG
Trigger: TCCCCAGCAGGCCAAACCCAAGCTCATCCCAGCTTC...GCCCTGGGGCTGGAGAGATGGGAGGGAGGTCTTAGGATGTTGTATGCTGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS TCA 90 bp GGTCATAGGCAGGACCAGGTTCTGGATCTGTCCAGGCCTCACACTTaGAATGCTCACTGGGATCCGATGGCTGCCCGATCCCAGCCAGGT +
Preference number: 5 (lower is better)
Translates to: GHRQDQVLDLSRPHT*NAHWDPMAARSQPG
Trigger: ACCTGGCTGGGATCGGGCAGCCATCGGATCCCAGTGAGCATTTCAAGTGTGAGGCCTGGACAGATCCAGAACCTGGTCCTGCCTATGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS TCA 90 bp AGTCAAACCCAAGGTAGATGTTGCCCTCCTCATCCACACCAGCGCTaGTCTCCTTTGTGCCTGGCCGGGCCTCCACCAACACAGGCTCAG +
Preference number: 5 (lower is better)
Translates to: SQTQGRCCPPHPHQR*SPLCLAGPPPTQAQ
Trigger: CTGAGCCTGTGTTGGTGGAGGCCCGGCCAGGCACAAAGGAGATCAGCGCTGGTGTGGATGAGGAGGGCAACATCTACCTTGGGTTTGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS GCA 90 bp GTGCACTCCGTACCTGCTCTCAATCCGGTACTTGCCTGGCTCCCCTaGCTGGCAGATCAGACTGCCGTCTTTGTACCATTGCACCACAGG +
Preference number: 5 (lower is better)
Translates to: VHSVPALNPVLAWLP*LADQTAVFVPLHHR
Trigger: CCTGTGGTGCAATGGTACAAAGACGGCAGTCTGATCTGCCAGGCAGGGGAGCCAGGCAAGTACCGGATTGAGAGCAGGTACGGAGTGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS GCA 90 bp TCTCAATCCGGTACTTGCCTGGCTCCCCTGCCTGGCAGATCAGACTaGCGTCTTTGTACCATTGCACCACAGGCGTGGGGAATCCTTGCA +
Preference number: 5 (lower is better)
Translates to: SQSGTCLAPLPGRSD*RLCTIAPQAWGILA
Trigger: TGCAAGGATTCCCCACGCCTGTGGTGCAATGGTACAAAGACGGCAGTCTGATCTGCCAGGCAGGGGAGCCAGGCAAGTACCGGATTGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS GCA 90 bp GTATTTCCCCTTGTCCTTCTCTGTGGGCTCACAGATCTGCAGCCATaGCATCTCCTCGCTCCCTCCGATCCGCATGTGCTCACTGGAGGA +
Preference number: 5 (lower is better)
Translates to: VFPLVLLCGLTDLQP*HLLAPSDPHVLTGG
Trigger: TCCTCCAGTGAGCACATGCGGATCGGAGGGAGCGAGGAGATGGCATGGCTGCAGATCTGTGAGCCCACAGAGAAGGACAAGGGGAAATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS CCA 90 bp CTCCAGAGTGTGCACTCCGTACCTGCTCTCAATCCGGTACTTGCCTaGCTCCCCTGCCTGGCAGATCAGACTGCCGTCTTTGTACCATTG +
Preference number: 5 (lower is better)
Translates to: LQSVHSVPALNPVLA*LPCLADQTAVFVPL
Trigger: CAATGGTACAAAGACGGCAGTCTGATCTGCCAGGCAGGGGAGCCAGGCAAGTACCGGATTGAGAGCAGGTACGGAGTGCACACTCTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS TCA 90 bp ATGAGTGTCTCTCCCACGCCAGATTGTCTTCCACCGTCTGCTCCATaGAGTACTTGTCTAGCTTGTCCCGAGCCTGTGACCGGGCCAGGT +
Preference number: 5 (lower is better)
Translates to: MSVSPTPDCLPPSAP*STCLACPEPVTGPG
Trigger: ACCTGGCCCGGTCACAGGCTCGGGACAAGCTAGACAAGTACTTCATGGAGCAGACGGTGGAAGACAATCTGGCGTGGGAGAGACACTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS TCA 90 bp CGTCTTTGTACCATTGCACCACAGGCGTGGGGAATCCTTGCACAGTaGAACAGAGCCTCACAGACATCCGCTCCCAGATGGTGTGGGACC +
Preference number: 5 (lower is better)
Translates to: RLCTIAPQAWGILAQ*NRASQTSAPRWCGT
Trigger: GGTCCCACACCATCTGGGAGCGGATGTCTGTGAGGCTCTGTTTCACTGTGCAAGGATTCCCCACGCCTGTGGTGCAATGGTACAAAGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS GCA 90 bp TCCTCGGCCGTCACCCCCTGGATGGTCAGGCTGACATACTTGGACTaGTCCATCTTCACCAAGAAGTGCTCGCTGAGCTCAATGTCCTTG +
Preference number: 5 (lower is better)
Translates to: SSAVTPWMVRLTYLD*SIFTKKCSLSSMSL
Trigger: CAAGGACATTGAGCTCAGCGAGCACTTCTTGGTGAAGATGGAGCAGTCCAAGTATGTCAGCCTGACCATCCAGGGGGTGACGGCCGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR CAA 90 bp CCACATGCCCATGACCCTGGATGTGCCAGCTGCCCTCTCTCAGCCCACTCTCCACCAATGGGTTTGTGGTaGCATGGTTCCCACATGTTT +
Preference number: 5 (lower is better)
Translates to: PHAHDPGCASCPLSAHSPPMGLW*HGSHMF
Trigger: AAACATGTGGGAACCATGCAACCACAAACCCATTGG...TGGAGAGTGGGCTGAGAGAGGGCAGCTGGCACATCCAGGGTCATGGGCATGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR CAA 90 bp CCACATGCCCATGACCCTGGATGTGCCAGCTGCCCTCTCTCAGCCCACTCTCCAATCTTCTCCCCGTGTTaGTACACACTGACAGTGACA +
Preference number: 5 (lower is better)
Translates to: PHAHDPGCASCPLSAHSPIFSPC*YTLTVT
Trigger: TGTCACTGTCAGTGTGTACAAACACGGGGAGAAGAT...TGGAGAGTGGGCTGAGAGAGGGCAGCTGGCACATCCAGGGTCATGGGCATGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS TCA 90 bp AGATGGAGGATCCCAGCTGAGGACAACGTAGTTCCTGCTGACCTCTaGGGCCTGGACATTAGTGGGAGGCCCTGGAATCTGAACATCACC +
Preference number: 5 (lower is better)
Translates to: RWRIPAEDNVVPADL*GLDISGRPWNLNIT
Trigger: GGTGATGTTCAGATTCCAGGGCCTCCCACTAATGTCCAGGCCTCAGAGGTCAGCAGGAACTACGTTGTCCTCAGCTGGGATCCTCCATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS GCA 90 bp CCCAGATGGTGTGGGACCTTAACCTCACCAGGATCTCAGGGGCCCTaGTCATTCGGTCTTCAAATGAGTGTCTCTCCCACGCCAGATTGT +
Preference number: 5 (lower is better)
Translates to: PRWCGTLTSPGSQGP*SFGLQMSVSPTPDC
Trigger: ACAATCTGGCGTGGGAGAGACACTCATTTGAAGACCGAATGAGCAGGGCCCCTGAGATCCTGGTGAGGTTAAGGTCCCACACCATCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS CCA 90 bp CCTGTGACCAGTGGGTCAGCATCTCTGACAAACATGAAAGCGCTGTaGTCGCTGACTCCACCCCGGGACACAATCCTCAAAGTGTACAGC +
Preference number: 5 (lower is better)
Translates to: PVTSGSASLTNMKAL*SLTPPRDTILKVYS
Trigger: GCTGTACACTTTGAGGATTGTGTCCCGGGGTGGAGTCAGCGACCACAGCGCTTTCATGTTTGTCAGAGATGCTGACCCACTGGTCACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR CAA 90 bp CCACATGCCCATGACCCTGGATGTGCCAGCTGCCCTCTCTCAGCCCACTCTCCACTTTTTCAATGCATATaGGTCCAGGAGGTACCTGGT +
Preference number: 5 (lower is better)
Translates to: PHAHDPGCASCPLSAHSPLFQCI*VQEVPG
Trigger: ACCAGGTACCTCCTGGACCAATATGCATTGAAAAAG...TGGAGAGTGGGCTGAGAGAGGGCAGCTGGCACATCCAGGGTCATGGGCATGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR CAA 90 bp CAGCACAGCATACAACATCCTAAGACCTCCCTCCCATCTCTCCAGCCCCAGGGCAACGTGTATTTCCCCTaGTCCTTCTCTGTGGGCTCA +
Preference number: 5 (lower is better)
Translates to: QHSIQHPKTSLPSLQPQGNVYFP*SFSVGS
Trigger: TGAGCCCACAGAGAAGGACAAGGGGAAATACACGTT...GCCCTGGGGCTGGAGAGATGGGAGGGAGGTCTTAGGATGTTGTATGCTGTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR CAA 90 bp AACTATCCAGACTACCACATGCTAGGACCATCTGAGCCTCAGTCCACATGCCCAACGTTGATGCTGTACTaGCCCGAGTCCTCGGCCGTC +
Preference number: 5 (lower is better)
Translates to: NYPDYHMLGPSEPQSTCPTLMLY*PESSAV
Trigger: GACGGCCGAGGACTCGGGCAAGTACAGCATCAACGT...TGGGCATGTGGACTGAGGCTCAGATGGTCCTAGCATGTGGTAGTCTGGATAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS TCA 90 bp AGCACCCGGCCAGGAGCAGAGGGGACCACAATCATGTCCTGTGCCTaGATAGGTGGTGTTATCTCTGATGGGTCACTCAGGCCATGTTTA +
Preference number: 5 (lower is better)
Translates to: STRPGAEGTTIMSCA*IGGVISDGSLRPCL
Trigger: TAAACATGGCCTGAGTGACCCATCAGAGATAACACCACCTATTCAGGCACAGGACATGATTGTGGTCCCCTCTGCTCCTGGCCGGGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS TCA 90 bp CGCCAATCACCTTGCCGCGATTCTTCTCTGCAAAAGCAGCAGCCTTaGGCTGCTGGAACTCAGCGTAGGCTTCGTCAAAAGCTTGTCCAG +
Preference number: 5 (lower is better)
Translates to: RQSPCRDSSLQKQQP*AAGTQRRLRQKLVQ
Trigger: CTGGACAAGCTTTTGACGAAGCCTACGCTGAGTTCCAGCAGCTCAAGGCTGCTGCTTTTGCAGAGAAGAATCGCGGCAAGGTGATTGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS GCA 90 bp TCGCTGGTCCCCACGGCATTGACAGCCTTGACCCGGAAGATGTACTaGTCACCGGTGGTTAAGCCGTGTACCACAAACCTGTTATATCCA +
Preference number: 5 (lower is better)
Translates to: SLVPTALTALTRKMY*SPVVKPCTTNLLYP
Trigger: TGGATATAACAGGTTTGTGGTACACGGCTTAACCACCGGTGAGCAGTACATCTTCCGGGTCAAGGCTGTCAATGCCGTGGGGACCAGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS CCA 90 bp TGGATCTGTCCAGGCCTCACACTTGAAATGCTCACTGGGATCCGATaGCTGCCCGATCCCAGCCAGGTTGGTAGCAGCAATTTTGAACTC +
Preference number: 5 (lower is better)
Translates to: WICPGLTLEMLTGIR*LPDPSQVGSSNFEL
Trigger: GAGTTCAAAATTGCTGCTACCAACCTGGCTGGGATCGGGCAGCCATCGGATCCCAGTGAGCATTTCAAGTGTGAGGCCTGGACAGATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS TCA 90 bp TTGCTACTGCTGAATAGGTGGCGGTGTCCTCAAAGTTGGCCCTGTTaGTCTCCAGAGTGTGCACTCCGTACCTGCTCTCAATCCGGTACT +
Preference number: 5 (lower is better)
Translates to: LLLLNRWRCPQSWPC*SPECALRTCSQSGT
Trigger: AGTACCGGATTGAGAGCAGGTACGGAGTGCACACTCTGGAGATCAACAGGGCCAACTTTGAGGACACCGCCACCTATTCAGCAGTAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS TCA 90 bp CAGAAACAGGACTGCTGCCCGAGTAAACGGGAGCTTTCCACAGAATaGCCAGAGAAGTGTCTCGGACCTCACAGAACGTCAGGTCATAGG +
Preference number: 5 (lower is better)
Translates to: QKQDCCPSKRELSTE*PEKCLGPHRTSGHR
Trigger: CCTATGACCTGACGTTCTGTGAGGTCCGAGACACTTCTCTGGTCATTCTGTGGAAAGCTCCCGTTTACTCGGGCAGCAGTCCTGTTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS TCA 90 bp CAAATCGCTCCTCATCAGCGATCTCCTCGTAGGCCTTACACCAGGTaGACTGCGAGGCATCTGTCATTTCCTGGCAGTCAAACCCAAGGT +
Preference number: 5 (lower is better)
Translates to: QIAPHQRSPRRPYTR*TARHLSFPGSQTQG
Trigger: ACCTTGGGTTTGACTGCCAGGAAATGACAGATGCCTCGCAGTTCACCTGGTGTAAGGCCTACGAGGAGATCGCTGATGAGGAGCGATTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS GCA 90 bp TCTTCAAATGAGTGTCTCTCCCACGCCAGATTGTCTTCCACCGTCTaGTCCATGAAGTACTTGTCTAGCTTGTCCCGAGCCTGTGACCGG +
Preference number: 5 (lower is better)
Translates to: SSNECLSHARLSSTV*SMKYLSSLSRACDR
Trigger: CCGGTCACAGGCTCGGGACAAGCTAGACAAGTACTTCATGGAGCAGACGGTGGAAGACAATCTGGCGTGGGAGAGACACTCATTTGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS GCA 90 bp TCTGTCCAGGCCTCACACTTGAAATGCTCACTGGGATCCGATGGCTaGCCGATCCCAGCCAGGTTGGTAGCAGCAATTTTGAACTCATAC +
Preference number: 5 (lower is better)
Translates to: SVQASHLKCSLGSDG*PIPARLVAAILNSY
Trigger: GTATGAGTTCAAAATTGCTGCTACCAACCTGGCTGGGATCGGGCAGCCATCGGATCCCAGTGAGCATTTCAAGTGTGAGGCCTGGACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS CCA 90 bp GGGATCACAGATGAAAGGGGCAATCCAATTGGGAGTCCTACTGAGTaGAAAGGTTCCTCTTCTCCTCGGTACCTTCTCACCACCACCGCA +
Preference number: 5 (lower is better)
Translates to: GITDERGNPIGSPTE*KGSSSPRYLLTTTA
Trigger: TGCGGTGGTGGTGAGAAGGTACCGAGGAGAAGAGGAACCTTTCCACTCAGTAGGACTCCCAATTGGATTGCCCCTTTCATCTGTGATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS TCA 90 bp CAGCCCTCACGCGGAACACATACGATCTTCCTTCGAAAAGTCCGGTaGCGGGGTACTTGCAGATCTTTACTGGTGCATCGTTACACTGGA +
Preference number: 5 (lower is better)
Translates to: QPSRGTHTIFLRKVR*RGTCRSLLVHRYTG
Trigger: TCCAGTGTAACGATGCACCAGTAAAGATCTGCAAGTACCCCGTCACCGGACTTTTCGAAGGAAGATCGTATGTGTTCCGCGTGAGGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS TCA 90 bp TACCAGCTGACCTTCATTTCCTCTGTGAAGTACTTCATGAAGCACTaGAGCCGGATGCCCTCTGGAGTGCAGAGAACCTTCAGGGGTGAG +
Preference number: 5 (lower is better)
Translates to: YQLTFISSVKYFMKH*SRMPSGVQRTFRGE
Trigger: CTCACCCCTGAAGGTTCTCTGCACTCCAGAGGGCATCCGGCTTCAGTGCTTCATGAAGTACTTCACAGAGGAAATGAAGGTCAGCTGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS GCA 90 bp TCTCTGTCATTAATGATGAACCGGAAGCTGGCATCAGGGGAAAGGTaGTCTGCCTGCAGCCAGAATCGGACCTGGCCCTTATCGAAAATC +
Preference number: 5 (lower is better)
Translates to: SLSLMMNRKLASGER*SACSQNRTWPLSKI
Trigger: GATTTTCGATAAGGGCCAGGTCCGATTCTGGCTGCAGGCAGAGCACCTTTCCCCTGATGCCAGCTTCCGGTTCATCATTAATGACAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS CCA 90 bp CACACAGCAGTCCACATAGTAGCCCAGCAGGTCCTCTTCATGCTTTaGTCTGTCCCACTGGACTACGACGGATGTCTTTGTATTCCTGGA +
Preference number: 5 (lower is better)
Translates to: HTAVHIVAQQVLFML*SVPLDYDGCLCIPG
Trigger: TCCAGGAATACAAAGACATCCGTCGTAGTCCAGTGGGACAGACCAAAGCATGAAGAGGACCTGCTGGGCTACTATGTGGACTGCTGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR CAA 90 bp ATTAGCCTAAAGCAAGACAAAAAGGTAAGCACGTACCATGCTCAAAGGCTCCACCTCTCAATCCGGTACTaGCCTGGCTCCCCTGCCTGG +
Preference number: 5 (lower is better)
Translates to: ISLKQDKKVSTYHAQRLHLSIRY*PGSPAW
Trigger: CCAGGCAGGGGAGCCAGGCAAGTACCGGATTGAGAG...GTGGAGCCTTTGAGCATGGTACGTGCTTACCTTTTTGTCTTGCTTTAGGCTAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR CAA 90 bp AGCCTCACACGAGTCTTAGAGCCTTATGTTCAGAAACATTCGCTTCCCCTCCACGCGGTGTCCTCAAAGTaGGCCCTGTTGATCTCCAGA +
Preference number: 5 (lower is better)
Translates to: SLTRVLEPYVQKHSLPLHAVSSK*ALLISR
Trigger: TCTGGAGATCAACAGGGCCAACTTTGAGGACACCGC...GTGGAGGGGAAGCGAATGTTTCTGAACATAAGGCTCTAAGACTCGTGTGAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS TCA 90 bp CGCAGCATTGGTAGACACTTGTCCATGGGAATTAGTTGCTACTGCTaGATAGGTGGCGGTGTCCTCAAAGTTGGCCCTGTTGATCTCCAG +
Preference number: 5 (lower is better)
Translates to: RSIGRHLSMGISCYC*IGGGVLKVGPVDLQ
Trigger: CTGGAGATCAACAGGGCCAACTTTGAGGACACCGCCACCTATTCAGCAGTAGCAACTAATTCCCATGGACAAGTGTCTACCAATGCTGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS CCA 90 bp AGACAACTTGGGTATAAGCAGCTCACAGACCCCCTTCTCCAGGTCTaGCGGTGTCTCCGTTTCGTAAAGAACATCGTCCTTGAGCCATTT +
Preference number: 5 (lower is better)
Translates to: RQLGYKQLTDPLLQV*RCLRFVKNIVLEPF
Trigger: AAATGGCTCAAGGACGATGTTCTTTACGAAACGGAGACACCGCCAGACCTGGAGAAGGGGGTCTGTGAGCTGCTTATACCCAAGTTGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR CAA 90 bp GTCCACATGCCACAGAAGCATAAAATCCAGAGAAACGGGTTAAGCCAAGATAGGAGCCCCTCGTCATCCTaGTTCAGGTGGCTGAAGGAC +
Preference number: 5 (lower is better)
Translates to: VHMPQKHKIQRNGLSQDRSPSSS*FRWLKD
Trigger: GTCCTTCAGCCACCTGAACAAGGATGACGAGGGGCT...CCTATCTTGGCTTAACCCGTTTCTCTGGATTTTATGCTTCTGTGGCATGTGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS GCA 90 bp ATGGTCAGGCTGACATACTTGGACTGCTCCATCTTCACCAAGAAGTaGTCGCTGAGCTCAATGTCCTTGTCGTTCTTAAACCAGACCACC +
Preference number: 5 (lower is better)
Translates to: MVRLTYLDCSIFTKK*SLSSMSLSFLNQTT
Trigger: GGTGGTCTGGTTTAAGAACGACAAGGACATTGAGCTCAGCGAGCACTTCTTGGTGAAGATGGAGCAGTCCAAGTATGTCAGCCTGACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS CCA 90 bp CTCTTCGAAGAGGACCTCTCTGTAAGAGACCTCTGGGAGGATGACTaGGTGGTTGCTTGCTTTTTCAATGCATATTGGTCCAGGAGGTAC +
Preference number: 5 (lower is better)
Translates to: LFEEDLSVRDLWEDD*VVACFFNAYWSRRY
Trigger: GTACCTCCTGGACCAATATGCATTGAAAAAGCAAGCAACCACCCAGTCATCCTCCCAGAGGTCTCTTACAGAGAGGTCCTCTTCGAAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS CCA 90 bp TCTTCCTTCGAAAAGTCCGGTGACGGGGTACTTGCAGATCTTTACTaGTGCATCGTTACACTGGACCCAGTTGTTAGTTCCCACCTCACA +
Preference number: 5 (lower is better)
Translates to: SSFEKSGDGVLADLY*CIVTLDPVVSSHLT
Trigger: TGTGAGGTGGGAACTAACAACTGGGTCCAGTGTAACGATGCACCAGTAAAGATCTGCAAGTACCCCGTCACCGGACTTTTCGAAGGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR CAA 90 bp GTCCACATGCCACAGAAGCATAAAATCCAGAGAAACGGGTTAAGCCAAGATAGGACCACCACCGCAGCATaGGTAGACACTTGTCCATGG +
Preference number: 5 (lower is better)
Translates to: VHMPQKHKIQRNGLSQDRTTTAA*VDTCPW
Trigger: CCATGGACAAGTGTCTACCAATGCTGCGGTGGTGGT...CCTATCTTGGCTTAACCCGTTTCTCTGGATTTTATGCTTCTGTGGCATGTGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS TCA 90 bp TGTCTGACGGCTTTCCTGGTCCACTGGCATTCACTGCTCGAATTCTaGATACATAGGTCTTACCCTGCTGCAGGTCACAGACCTTTAAGT +
Preference number: 5 (lower is better)
Translates to: CLTAFLVHWHSLLEF*IHRSYPAAGHRPLS
Trigger: ACTTAAAGGTCTGTGACCTGCAGCAGGGTAAGACCTATGTATTCAGAATTCGAGCAGTGAATGCCAGTGGACCAGGAAAGCCGTCAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS GCA 90 bp TCCTTCGAAAAGTCCGGTGACGGGGTACTTGCAGATCTTTACTGGTaGATCGTTACACTGGACCCAGTTGTTAGTTCCCACCTCACATTT +
Preference number: 5 (lower is better)
Translates to: SFEKSGDGVLADLYW*IVTLDPVVSSHLTF
Trigger: AAATGTGAGGTGGGAACTAACAACTGGGTCCAGTGTAACGATGCACCAGTAAAGATCTGCAAGTACCCCGTCACCGGACTTTTCGAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS GCA 90 bp CTCCACACACACGACTCATGGCTAAGATCATGTCCTCGTACACTTTaGCACCTACTTCCAGGACAGATACATCCTGACCTCTGTCATCTT +
Preference number: 5 (lower is better)
Translates to: LHTHDSWLRSCPRTL*HLLPGQIHPDLCHL
Trigger: AAGATGACAGAGGTCAGGATGTATCTGTCCTGGAAGTAGGTGGCAAAGTGTACGAGGACATGATCTTAGCCATGAGTCGTGTGTGTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR CAA 90 bp ACATGGTTCATGGTCCACATGCCACAGAAGCATAAAATCCAGAGAAACGGGTTACCGGTGACGGGGTACTaGCAGATCTTTACTGGTGCA +
Preference number: 5 (lower is better)
Translates to: TWFMVHMPQKHKIQRNGLPVTGY*QIFTGA
Trigger: TGCACCAGTAAAGATCTGCAAGTACCCCGTCACCGG...TAACCCGTTTCTCTGGATTTTATGCTTCTGTGGCATGTGGACCATGAACCATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR CAA 90 bp CGCTTCCCCTCCACACAGATAATTTGCATCGCAAAGTGCAAGATCAAAAACCTAGTCCAGGCCTCACACTaGAAATGCTCACTGGGATCC +
Preference number: 5 (lower is better)
Translates to: RFPSTQIICIAKCKIKNLVQASH*KCSLGS
Trigger: GGATCCCAGTGAGCATTTCAAGTGTGAGGCCTGGAC...TAGGTTTTTGATCTTGCACTTTGCGATGCAAATTATCTGTGTGGAGGGGAAGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR CAA 90 bp ACATGGTTCATGGTCCACATGCCACAGAAGCATAAAATCCAGAGAAACGGGTTAAGTAGCGATTTGGAGTaGCTGCCTCGCTGGTGGTCT +
Preference number: 5 (lower is better)
Translates to: TWFMVHMPQKHKIQRNGLSSDLE*LPRWWS
Trigger: AGACCACCAGCGAGGCAGCAACTCCAAATCGCTACT...TAACCCGTTTCTCTGGATTTTATGCTTCTGTGGCATGTGGACCATGAACCATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR CAA 90 bp AGCCTCACACGAGTCTTAGAGCCTTATGTTCAGAAACATTCGCTTCCCCTCCACGGGTTCTTTATCTCATaGCTCAGTGCCATCAAACGC +
Preference number: 5 (lower is better)
Translates to: SLTRVLEPYVQKHSLPLHGFFIS*LSAIKR
Trigger: GCGTTTGATGGCACTGAGCAATGAGATAAAGAACCC...GTGGAGGGGAAGCGAATGTTTCTGAACATAAGGCTCTAAGACTCGTGTGAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR CAA 90 bp AGCCTCACACGAGTCTTAGAGCCTTATGTTCAGAAACATTCGCTTCCCCTCCACTCTTCTAGGACAGCCTaGAATGCATCTCCAATGAGC +
Preference number: 5 (lower is better)
Translates to: SLTRVLEPYVQKHSLPLHSSRTA*NASPMS
Trigger: GCTCATTGGAGATGCATTCAAGGCTGTCCTAGAAGA...GTGGAGGGGAAGCGAATGTTTCTGAACATAAGGCTCTAAGACTCGTGTGAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR CAA 90 bp AGCCCACTCTCCACTGCCATTCACTCTCAGCCTCACACGAGTCTTAGAGCCTTATATTTATTCTTCACGTaGATGCTGTACTTGCCCGAG +
Preference number: 5 (lower is better)
Translates to: SPLSTAIHSQPHTSLRALYLFFT*MLYLPE
Trigger: CTCGGGCAAGTACAGCATCAACGTGAAGAATAAATA...TAAGGCTCTAAGACTCGTGTGAGGCTGAGAGTGAATGGCAGTGGAGAGTGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS CCA 90 bp CTCTGGGAGGATGACTGGGTGGTTGCTTGCTTTTTCAATGCATATTaGTCCAGGAGGTACCTGGTTTGGATGTTTCGATATGACTGGTCA +
Preference number: 5 (lower is better)
Translates to: LWEDDWVVACFFNAY*SRRYLVWMFRYDWS
Trigger: TGACCAGTCATATCGAAACATCCAAACCAGGTACCTCCTGGACCAATATGCATTGAAAAAGCAAGCAACCACCCAGTCATCCTCCCAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR CAA 90 bp ACATGGTTCATGGTCCACATGCCACAGAAGCATAAAATCCAGAGAAACGGGTTAATGGTTCCCACATGTTaGTTCCCGCCACACAGCAGT +
Preference number: 5 (lower is better)
Translates to: TWFMVHMPQKHKIQRNGLMVPTC*FPPHSS
Trigger: ACTGCTGTGTGGCGGGAACAAACATGTGGGAACCAT...TAACCCGTTTCTCTGGATTTTATGCTTCTGTGGCATGTGGACCATGAACCATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR CAA 90 bp AGCCTCACACGAGTCTTAGAGCCTTATGTTCAGAAACATTCGCTTCCCCTCCACTTATATCCAATGGGTTaGTGGTTGCATGGTTCCCAC +
Preference number: 5 (lower is better)
Translates to: SLTRVLEPYVQKHSLPLHLYPMG*WLHGSH
Trigger: GTGGGAACCATGCAACCACAAACCCATTGGATATAA...GTGGAGGGGAAGCGAATGTTTCTGAACATAAGGCTCTAAGACTCGTGTGAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR CAA 90 bp CAGATAATTTGCATCGCAAAGTGCAAGATCAAAAACCTAGTGTACGGTCGCCAGCCGATCCCAGCCAGGTaGGTAGCAGCAATTTTGAAC +
Preference number: 5 (lower is better)
Translates to: QIICIAKCKIKNLVYGRQPIPAR*VAAILN
Trigger: GTTCAAAATTGCTGCTACCAACCTGGCTGGGATCGG...CTGGCGACCGTACACTAGGTTTTTGATCTTGCACTTTGCGATGCAAATTATCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR CAA 90 bp ACATGGTTCATGGTCCACATGCCACAGAAGCATAAAATCCAGAGAAACGGGTTAAAAGGGGCAATCCAATaGGGAGTCCTACTGAGTGGA +
Preference number: 5 (lower is better)
Translates to: TWFMVHMPQKHKIQRNGLKGAIQ*GVLLSG
Trigger: TCCACTCAGTAGGACTCCCAATTGGATTGCCCCTTT...TAACCCGTTTCTCTGGATTTTATGCTTCTGTGGCATGTGGACCATGAACCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR CAA 90 bp AGCCTCACACGAGTCTTAGAGCCTTATGTTCAGAAACATTCGCTTCCCCTCCACTTGGTAGCAGCAATTTaGAACTCATACAAGGAGCCT +
Preference number: 5 (lower is better)
Translates to: SLTRVLEPYVQKHSLPLHLVAAI*NSYKEP
Trigger: AGGCTCCTTGTATGAGTTCAAAATTGCTGCTACCAA...GTGGAGGGGAAGCGAATGTTTCTGAACATAAGGCTCTAAGACTCGTGTGAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR CAA 90 bp ACATGGTTCATGGTCCACATGCCACAGAAGCATAAAATCCAGAGAAACGGGTTAGTGAGGTTCAAGGTCTaGCCTTCCATTATGGTCACC +
Preference number: 5 (lower is better)
Translates to: TWFMVHMPQKHKIQRNGLVRFKV*PSIMVT
Trigger: GGTGACCATAATGGAAGGCAAGACCTTGAACCTCAC...TAACCCGTTTCTCTGGATTTTATGCTTCTGTGGCATGTGGACCATGAACCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS TCA 90 bp CAATGCATATTGGTCCAGGAGGTACCTGGTTTGGATGTTTCGATATaGCTGGTCAAAGTGCTTGTGTCTTTTCTGGTAGAAAGGCACTGC +
Preference number: 5 (lower is better)
Translates to: QCILVQEVPGLDVSI*LVKVLVSFLVERHC
Trigger: GCAGTGCCTTTCTACCAGAAAAGACACAAGCACTTTGACCAGTCATATCGAAACATCCAAACCAGGTACCTCCTGGACCAATATGCATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS TCA 90 bp TGGTGTTTGCAACCTTACAGACAAGCCGAACTTCACACTCTTCAGTaGCATCCCAGTGCAAATATTCAGCAAAATGAGGGCCTTGTTTCC +
Preference number: 5 (lower is better)
Translates to: WCLQPYRQAELHTLQ*HPSANIQQNEGLVS
Trigger: GGAAACAAGGCCCTCATTTTGCTGAATATTTGCACTGGGATGTCACTGAAGAGTGTGAAGTTCGGCTTGTCTGTAAGGTTGCAAACACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR CAA 90 bp ATTAGCCTAAAGCAAGACAAAAAGGTAAGCACGTACCATGCTCAAAGGCTCCACAACATCTTGGTCCACTaGGACTCTTTCAGCAGCACA +
Preference number: 5 (lower is better)
Translates to: ISLKQDKKVSTYHAQRLHNILVH*DSFSST
Trigger: TGTGCTGCTGAAAGAGTCCAAGTGGACCAAGATGTT...GTGGAGCCTTTGAGCATGGTACGTGCTTACCTTTTTGTCTTGCTTTAGGCTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR CAA 90 bp GTCCACATGCCACAGAAGCATAAAATCCAGAGAAACGGGTTAAGCCAAGATAGGTCTCCAAAGAACATCTaGGTCCACTTGGACTCTTTC +
Preference number: 5 (lower is better)
Translates to: VHMPQKHKIQRNGLSQDRSPKNI*VHLDSF
Trigger: GAAAGAGTCCAAGTGGACCAAGATGTTCTTTGGAGA...CCTATCTTGGCTTAACCCGTTTCTCTGGATTTTATGCTTCTGTGGCATGTGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR CAA 90 bp GTCCACATGCCACAGAAGCATAAAATCCAGAGAAACGGGTTAAGCCAAGATAGGTCCTTCTTAGACAACTaGGGTATAAGCAGCTCACAG +
Preference number: 5 (lower is better)
Translates to: VHMPQKHKIQRNGLSQDRSFLDN*GISSSQ
Trigger: CTGTGAGCTGCTTATACCCAAGTTGTCTAAGAAGGA...CCTATCTTGGCTTAACCCGTTTCTCTGGATTTTATGCTTCTGTGGCATGTGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR CAA 90 bp CGCTTCCCCTCCACACAGATAATTTGCATCGCAAAGTGCAAGATCAAAAACCTACGTTGGTGGCTGTCTTaGCCATCGAAAATCTCAAAC +
Preference number: 5 (lower is better)
Translates to: RFPSTQIICIAKCKIKNLRWWLS*PSKISN
Trigger: GTTTGAGATTTTCGATGGCAAAGACAGCCACCAACG...TAGGTTTTTGATCTTGCACTTTGCGATGCAAATTATCTGTGTGGAGGGGAAGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS CCA 90 bp GGGTGGTTGCTTGCTTTTTCAATGCATATTGGTCCAGGAGGTACCTaGTTTGGATGTTTCGATATGACTGGTCAAAGTGCTTGTGTCTTT +
Preference number: 5 (lower is better)
Translates to: GWLLAFSMHIGPGGT*FGCFDMTGQSACVF
Trigger: AAAGACACAAGCACTTTGACCAGTCATATCGAAACATCCAAACCAGGTACCTCCTGGACCAATATGCATTGAAAAAGCAAGCAACCACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR CAA 90 bp ATTATTATTAGCCTAAAGCAAGACAAAAAGGTAAGCACGTACCATGCTCAAAGGAGGCGTGGGGAATCCTaGCACAGTGAAACAGAGCCT +
Preference number: 5 (lower is better)
Translates to: IIISLKQDKKVSTYHAQRRRGES*HSETEP
Trigger: AGGCTCTGTTTCACTGTGCAAGGATTCCCCACGCCT...CCTTTGAGCATGGTACGTGCTTACCTTTTTGTCTTGCTTTAGGCTAATAATAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR CAA 90 bp ACATGGTTCATGGTCCACATGCCACAGAAGCATAAAATCCAGAGAAACGGGTTATCGTCCTTGAGCCATTaGAAAACAGTTTCCCTCTTG +
Preference number: 5 (lower is better)
Translates to: TWFMVHMPQKHKIQRNGLSSLSH*KTVSLL
Trigger: CAAGAGGGAAACTGTTTTCAAATGGCTCAAGGACGA...TAACCCGTTTCTCTGGATTTTATGCTTCTGTGGCATGTGGACCATGAACCATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS GCA 90 bp ATGACCATCTCAATCATGCCTGTCGATCTGTCACATTTAATTCTGTaGGTGTCACTGTCAGAAACCTCTCTGTCATTAATGATGAACCGG +
Preference number: 5 (lower is better)
Translates to: MTISIMPVDLSHLIL*VSLSETSLSLMMNR
Trigger: CCGGTTCATCATTAATGACAGAGAGGTTTCTGACAGTGACACGCACAGAATTAAATGTGACAGATCGACAGGCATGATTGAGATGGTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS CCA 90 bp GTTGCTTGCTTTTTCAATGCATATTGGTCCAGGAGGTACCTGGTTTaGATGTTTCGATATGACTGGTCAAAGTGCTTGTGTCTTTTCTGG +
Preference number: 5 (lower is better)
Translates to: VACFFNAYWSRRYLV*MFRYDWSKCLCLFW
Trigger: CCAGAAAAGACACAAGCACTTTGACCAGTCATATCGAAACATCCAAACCAGGTACCTCCTGGACCAATATGCATTGAAAAAGCAAGCAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR CAA 90 bp ATTAGCCTAAAGCAAGACAAAAAGGTAAGCACGTACCATGCTCAAAGGCTCCACCTGACTTCAGTGGAATaGTGGGGTTCTTTATCTCAT +
Preference number: 5 (lower is better)
Translates to: ISLKQDKKVSTYHAQRLHLTSVE*WGSLSH
Trigger: ATGAGATAAAGAACCCCACAATTCCACTGAAGTCAG...GTGGAGCCTTTGAGCATGGTACGTGCTTACCTTTTTGTCTTGCTTTAGGCTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR CAA 90 bp ATTATTATTAGCCTAAAGCAAGACAAAAAGGTAAGCACGTACCATGCTCAAAGGTTGACAGGTGAAGAGTaGACCTCGTGCCAGTTCTTG +
Preference number: 5 (lower is better)
Translates to: IIISLKQDKKVSTYHAQRLTGEE*TSCQFL
Trigger: CAAGAACTGGCACGAGGTCAACTCTTCACCTGTCAA...CCTTTGAGCATGGTACGTGCTTACCTTTTTGTCTTGCTTTAGGCTAATAATAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR CAA 90 bp ATTATTATTAGCCTAAAGCAAGACAAAAAGGTAAGCACGTACCATGCTCAAAGGAAAACAGTTTCCCTCTaGGTGTTTGCAACCTTACAG +
Preference number: 5 (lower is better)
Translates to: IIISLKQDKKVSTYHAQRKTVSL*VFATLQ
Trigger: CTGTAAGGTTGCAAACACCAAGAGGGAAACTGTTTT...CCTTTGAGCATGGTACGTGCTTACCTTTTTGTCTTGCTTTAGGCTAATAATAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS-3UTR CAA 90 bp ATTATTATTAGCCTAAAGCAAGACAAAAAGGTAAGCACGTACCATGCTCAAAGGTGTCATCTTTCAAGGTaGCTTTGTATTCACCATGGT +
Preference number: 5 (lower is better)
Translates to: IIISLKQDKKVSTYHAQRCHLSR*LCIHHG
Trigger: ACCATGGTGAATACAAAGCAACCTTGAAAGATGACA...CCTTTGAGCATGGTACGTGCTTACCTTTTTGTCTTGCTTTAGGCTAATAATAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS TCA 72 bp GTGAGGGCCGCCTGGACCTTGATGACCTCTGACTCCTaGGAGTTCTCGCTGGTCCCCACGGCATTGACAGCC +
Preference number: 6 (lower is better)
Translates to: VRAAWTLMTSDS*EFSLVPTALTA
Trigger: GGCTGTCAATGCCGTGGGGACCAGCGAGAACTCTCAGGAGTCAGAGGTCATCAAGGTCCAGGCGGCCCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS TCA 72 bp GGGGACAGTGAGGGCCGCCTGGACCTTGATGACCTCTaGCTCCTGAGAGTTCTCGCTGGTCCCCACGGCATT +
Preference number: 6 (lower is better)
Translates to: GDSEGRLDLDDL*LLRVLAGPHGI
Trigger: AATGCCGTGGGGACCAGCGAGAACTCTCAGGAGTCAGAGGTCATCAAGGTCCAGGCGGCCCTCACTGTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS CCA 72 bp TTGTCTAGCTTGTCCCGAGCCTGTGACCGGGCCAGGTaGACATTCTCCTCCAGCTGGGCCAGCTCACTGAGG +
Preference number: 6 (lower is better)
Translates to: LSSLSRACDRAR*TFSSSWASSLR
Trigger: CCTCAGTGAGCTGGCCCAGCTGGAGGAGAATGTCCACCTGGCCCGGTCACAGGCTCGGGACAAGCTAGACAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS GCA 72 bp CCTCTTCTGATGCGCTCACCCGCTTTGCACAGAGCCTaGAGGTCATCGCCCCAGCAGAGCTCTGACTGGAAG +
Preference number: 6 (lower is better)
Translates to: PLLMRSPALHRA*RSSPQQSSDWK
Trigger: CTTCCAGTCAGAGCTCTGCTGGGGCGATGACCTGCAGGCTCTGTGCAAAGCGGGTGAGCGCATCAGAAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS GCA 72 bp GGTACTTGCCTGGCTCCCCTGCCTGGCAGATCAGACTaGCGTCTTTGTACCATTGCACCACAGGCGTGGGGA +
Preference number: 6 (lower is better)
Translates to: GTCLAPLPGRSD*RLCTIAPQAWG
Trigger: TCCCCACGCCTGTGGTGCAATGGTACAAAGACGGCAGTCTGATCTGCCAGGCAGGGGAGCCAGGCAAGTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS CAA 72 bp CCTGGCTCCCCTGCCTGGCAGATCAGACTGCCGTCTTaGTACCATTGCACCACAGGCGTGGGGAATCCTTGC +
Preference number: 6 (lower is better)
Translates to: PGSPAWQIRLPS*YHCTTGVGNPC
Trigger: GCAAGGATTCCCCACGCCTGTGGTGCAATGGTACAAAGACGGCAGTCTGATCTGCCAGGCAGGGGAGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS CCA 72 bp TGTCCCACTGGACTACGACGGATGTCTTTGTATTCCTaGAGGCAAGCACCCGGCCAGGAGCAGAGGGGACCA +
Preference number: 6 (lower is better)
Translates to: CPTGLRRMSLYS*RQAPGQEQRGP
Trigger: TGGTCCCCTCTGCTCCTGGCCGGGTGCTTGCCTCCAGGAATACAAAGACATCCGTCGTAGTCCAGTGGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS CAA 90 bp CCCGAGTCCTCGGCCGTCACCCCCTGGATGGTCAGGCTGACATACTaGGACTGCTCCATCTTCACCAAGAAGTGCTCGCTGAGCTCAATG +
Preference number: 6 (lower is better)
Translates to: PESSAVTPWMVRLTY*DCSIFTKKCSLSSM
Trigger: CATTGAGCTCAGCGAGCACTTCTTGGTGAAGATGGAGCAGTCCAAGTATGTCAGCCTGACCATCCAGGGGGTGACGGCCGAGGACTCGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS CAA 90 bp GCCAGATTGTCTTCCACCGTCTGCTCCATGAAGTACTTGTCTAGCTaGTCCCGAGCCTGTGACCGGGCCAGGTGGACATTCTCCTCCAGC +
Preference number: 6 (lower is better)
Translates to: ARLSSTVCSMKYLSS*SRACDRARWTFSSS
Trigger: GCTGGAGGAGAATGTCCACCTGGCCCGGTCACAGGCTCGGGACAAGCTAGACAAGTACTTCATGGAGCAGACGGTGGAAGACAATCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS CAA 90 bp CTCTCCCACGCCAGATTGTCTTCCACCGTCTGCTCCATGAAGTACTaGTCTAGCTTGTCCCGAGCCTGTGACCGGGCCAGGTGGACATTC +
Preference number: 6 (lower is better)
Translates to: LSHARLSSTVCSMKY*SSLSRACDRARWTF
Trigger: GAATGTCCACCTGGCCCGGTCACAGGCTCGGGACAAGCTAGACAAGTACTTCATGGAGCAGACGGTGGAAGACAATCTGGCGTGGGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS TCA 72 bp CAGGACCAGGTTCTGGATCTGTCCAGGCCTCACACTTaGAATGCTCACTGGGATCCGATGGCTGCCCGATCC +
Preference number: 6 (lower is better)
Translates to: QDQVLDLSRPHT*NAHWDPMAARS
Trigger: GGATCGGGCAGCCATCGGATCCCAGTGAGCATTTCAAGTGTGAGGCCTGGACAGATCCAGAACCTGGTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS TCA 72 bp CCGAGTCCTCGGCCGTCACCCCCTGGATGGTCAGGCTaGCATACTTGGACTGCTCCATCTTCACCAAGAAGT +
Preference number: 6 (lower is better)
Translates to: PSPRPSPPGWSG*HTWTAPSSPRS
Trigger: ACTTCTTGGTGAAGATGGAGCAGTCCAAGTATGTCAGCCTGACCATCCAGGGGGTGACGGCCGAGGACTCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS GCA 72 bp GATGAACCGGAAGCTGGCATCAGGGGAAAGGTGCTCTaGCTGCAGCCAGAATCGGACCTGGCCCTTATCGAA +
Preference number: 6 (lower is better)
Translates to: DEPEAGIRGKVL*LQPESDLALIE
Trigger: TTCGATAAGGGCCAGGTCCGATTCTGGCTGCAGGCAGAGCACCTTTCCCCTGATGCCAGCTTCCGGTTCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS GCA 72 bp TATTTCCCCTTGTCCTTCTCTGTGGGCTCACAGATCTaGAGCCATGCCATCTCCTCGCTCCCTCCGATCCGC +
Preference number: 6 (lower is better)
Translates to: YFPLSFSVGSQI*SHAISSLPPIR
Trigger: GCGGATCGGAGGGAGCGAGGAGATGGCATGGCTGCAGATCTGTGAGCCCACAGAGAAGGACAAGGGGAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS CCA 72 bp CCAGGCCTCACACTTGAAATGCTCACTGGGATCCGATaGCTGCCCGATCCCAGCCAGGTTGGTAGCAGCAAT +
Preference number: 6 (lower is better)
Translates to: PGLTLEMLTGIR*LPDPSQVGSSN
Trigger: ATTGCTGCTACCAACCTGGCTGGGATCGGGCAGCCATCGGATCCCAGTGAGCATTTCAAGTGTGAGGCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS CAA 72 bp GCCAGATTGTCTTCCACCGTCTGCTCCATGAAGTACTaGTCTAGCTTGTCCCGAGCCTGTGACCGGGCCAGG +
Preference number: 6 (lower is better)
Translates to: ARLSSTVCSMKY*SSLSRACDRAR
Trigger: CCTGGCCCGGTCACAGGCTCGGGACAAGCTAGACAAGTACTTCATGGAGCAGACGGTGGAAGACAATCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS CAA 72 bp GCTTTGGTCTGTCCCACTGGACTACGACGGATGTCTTaGTATTCCTGGAGGCAAGCACCCGGCCAGGAGCAG +
Preference number: 6 (lower is better)
Translates to: ALVCPTGLRRMS*YSWRQAPGQEQ
Trigger: CTGCTCCTGGCCGGGTGCTTGCCTCCAGGAATACAAAGACATCCGTCGTAGTCCAGTGGGACAGACCAAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS CAA 72 bp GCAGGACCAGGTTCTGGATCTGTCCAGGCCTCACACTaGAAATGCTCACTGGGATCCGATGGCTGCCCGATC +
Preference number: 6 (lower is better)
Translates to: AGPGSGSVQASH*KCSLGSDGCPI
Trigger: GATCGGGCAGCCATCGGATCCCAGTGAGCATTTCAAGTGTGAGGCCTGGACAGATCCAGAACCTGGTCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS CAA 72 bp TCGGCCGTCACCCCCTGGATGGTCAGGCTGACATACTaGGACTGCTCCATCTTCACCAAGAAGTGCTCGCTG +
Preference number: 6 (lower is better)
Translates to: SAVTPWMVRLTY*DCSIFTKKCSL
Trigger: CAGCGAGCACTTCTTGGTGAAGATGGAGCAGTCCAAGTATGTCAGCCTGACCATCCAGGGGGTGACGGCCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS CAA 90 bp TTGATCTCCAGAGTGTGCACTCCGTACCTGCTCTCAATCCGGTACTaGCCTGGCTCCCCTGCCTGGCAGATCAGACTGCCGTCTTTGTAC +
Preference number: 6 (lower is better)
Translates to: LISRVCTPYLLSIRY*PGSPAWQIRLPSLY
Trigger: GTACAAAGACGGCAGTCTGATCTGCCAGGCAGGGGAGCCAGGCAAGTACCGGATTGAGAGCAGGTACGGAGTGCACACTCTGGAGATCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS CAA 90 bp AGCAGCCTTGAGCTGCTGGAACTCAGCGTAGGCTTCGTCAAAAGCTaGTCCAGAGAGGTCCAGCGAGCGTTGGTGGCTGTCTTTGCCATC +
Preference number: 6 (lower is better)
Translates to: SSLELLELSVGFVKS*SREVQRALVAVFAI
Trigger: GATGGCAAAGACAGCCACCAACGCTCGCTGGACCTCTCTGGACAAGCTTTTGACGAAGCCTACGCTGAGTTCCAGCAGCTCAAGGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS GCA 72 bp GTACCTGCTCTCAATCCGGTACTTGCCTGGCTCCCCTaGCTGGCAGATCAGACTGCCGTCTTTGTACCATTG +
Preference number: 6 (lower is better)
Translates to: VPALNPVLAWLP*LADQTAVFVPL
Trigger: CAATGGTACAAAGACGGCAGTCTGATCTGCCAGGCAGGGGAGCCAGGCAAGTACCGGATTGAGAGCAGGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS GCA 72 bp CCCACGGCATTGACAGCCTTGACCCGGAAGATGTACTaGTCACCGGTGGTTAAGCCGTGTACCACAAACCTG +
Preference number: 6 (lower is better)
Translates to: PTALTALTRKMY*SPVVKPCTTNL
Trigger: CAGGTTTGTGGTACACGGCTTAACCACCGGTGAGCAGTACATCTTCCGGGTCAAGGCTGTCAATGCCGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS CAA 72 bp TCTTCCACCGTCTGCTCCATGAAGTACTTGTCTAGCTaGTCCCGAGCCTGTGACCGGGCCAGGTGGACATTC +
Preference number: 6 (lower is better)
Translates to: SSTVCSMKYLSS*SRACDRARWTF
Trigger: GAATGTCCACCTGGCCCGGTCACAGGCTCGGGACAAGCTAGACAAGTACTTCATGGAGCAGACGGTGGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS CAA 72 bp GTCAAAGACAGCATACCGAGGAGATCTCACCGCCGTTaGAGCATTGACCCTCTGCCAGCTGCCACTCCCAAC +
Preference number: 6 (lower is better)
Translates to: VKDSIPRRSHRR*SIDPLPAATPN
Trigger: GTTGGGAGTGGCAGCTGGCAGAGGGTCAATGCTCAAACGGCGGTGAGATCTCCTCGGTATGCTGTCTTTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS TCA 72 bp CAGGATCTCAGGGGCCCTGCTCATTCGGTCTTCAAATaGGTGTCTCTCCCACGCCAGATTGTCTTCCACCGT +
Preference number: 6 (lower is better)
Translates to: QDLRGPAHSVFK*VSLPRQIVFHR
Trigger: ACGGTGGAAGACAATCTGGCGTGGGAGAGACACTCATTTGAAGACCGAATGAGCAGGGCCCCTGAGATCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS TCA 72 bp TCTGCCAGCTGCCACTCCCAACTGCAGACTTCTCGATaGAGTACATTAAGGGATCCTTGCCGCGGGGAGATG +
Preference number: 6 (lower is better)
Translates to: SASCHSQLQTSR*STLRDPCRGEM
Trigger: CATCTCCCCGCGGCAAGGATCCCTTAATGTACTTCATCGAGAAGTCTGCAGTTGGGAGTGGCAGCTGGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS TCA 72 bp TCAAAGACAGCATACCGAGGAGATCTCACCGCCGTTTaGGCATTGACCCTCTGCCAGCTGCCACTCCCAACT +
Preference number: 6 (lower is better)
Translates to: SKTAYRGDLTAV*ALTLCQLPLPT
Trigger: AGTTGGGAGTGGCAGCTGGCAGAGGGTCAATGCTCAAACGGCGGTGAGATCTCCTCGGTATGCTGTCTTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS GCA 72 bp GAGTGTCTCTCCCACGCCAGATTGTCTTCCACCGTCTaGTCCATGAAGTACTTGTCTAGCTTGTCCCGAGCC +
Preference number: 6 (lower is better)
Translates to: ECLSHARLSSTV*SMKYLSSLSRA
Trigger: GGCTCGGGACAAGCTAGACAAGTACTTCATGGAGCAGACGGTGGAAGACAATCTGGCGTGGGAGAGACACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS GCA 72 bp TGTGGGACCTTAACCTCACCAGGATCTCAGGGGCCCTaGTCATTCGGTCTTCAAATGAGTGTCTCTCCCACG +
Preference number: 6 (lower is better)
Translates to: CGTLTSPGSQGP*SFGLQMSVSPT
Trigger: CGTGGGAGAGACACTCATTTGAAGACCGAATGAGCAGGGCCCCTGAGATCCTGGTGAGGTTAAGGTCCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS GCA 72 bp GCCTCACACTTGAAATGCTCACTGGGATCCGATGGCTaGCCGATCCCAGCCAGGTTGGTAGCAGCAATTTTG +
Preference number: 6 (lower is better)
Translates to: ASHLKCSLGSDG*PIPARLVAAIL
Trigger: CAAAATTGCTGCTACCAACCTGGCTGGGATCGGGCAGCCATCGGATCCCAGTGAGCATTTCAAGTGTGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS GCA 72 bp TTAATGATGAACCGGAAGCTGGCATCAGGGGAAAGGTaGTCTGCCTGCAGCCAGAATCGGACCTGGCCCTTA +
Preference number: 6 (lower is better)
Translates to: LMMNRKLASGER*SACSQNRTWPL
Trigger: TAAGGGCCAGGTCCGATTCTGGCTGCAGGCAGAGCACCTTTCCCCTGATGCCAGCTTCCGGTTCATCATTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS GCA 72 bp GTCACCCCCTGGATGGTCAGGCTGACATACTTGGACTaGTCCATCTTCACCAAGAAGTGCTCGCTGAGCTCA +
Preference number: 6 (lower is better)
Translates to: VTPWMVRLTYLD*SIFTKKCSLSS
Trigger: TGAGCTCAGCGAGCACTTCTTGGTGAAGATGGAGCAGTCCAAGTATGTCAGCCTGACCATCCAGGGGGTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS CAA 72 bp TCTCCTCCGTATTTATTCTTCACGTTGATGCTGTACTaGCCCGAGTCCTCGGCCGTCACCCCCTGGATGGTC +
Preference number: 6 (lower is better)
Translates to: SPPYLFFTLMLY*PESSAVTPWMV
Trigger: GACCATCCAGGGGGTGACGGCCGAGGACTCGGGCAAGTACAGCATCAACGTGAAGAATAAATACGGAGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS CAA 90 bp CGTGGCTGTACTCTCTTCAGATCTGGCGTCACCAATAGCGTGCACTaGAGTGTGACTGTCTCGCCCTCTCTTCTGAAGGTGACCCCGAAT +
Preference number: 6 (lower is better)
Translates to: RGCTLFRSGVTNSVH*SVTVSPSLLKVTPN
Trigger: ATTCGGGGTCACCTTCAGAAGAGAGGGCGAGACAGTCACACTCAAGTGCACGCTATTGGTGACGCCAGATCTGAAGAGAGTACAGCCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS CAA 90 bp TTGCCTTCCATTATGGTCACCACGTCTGGTAAGCCGCCAATCACCTaGCCGCGATTCTTCTCTGCAAAAGCAGCAGCCTTGAGCTGCTGG +
Preference number: 6 (lower is better)
Translates to: LPSIMVTTSGKPPIT*PRFFSAKAAALSCW
Trigger: CCAGCAGCTCAAGGCTGCTGCTTTTGCAGAGAAGAATCGCGGCAAGGTGATTGGCGGCTTACCAGACGTGGTGACCATAATGGAAGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS CAA 90 bp TCGATCTTCTCTCCTCCGTATTTATTCTTCACGTTGATGCTGTACTaGCCCGAGTCCTCGGCCGTCACCCCCTGGATGGTCAGGCTGACA +
Preference number: 6 (lower is better)
Translates to: SIFSPPYLFFTLMLY*PESSAVTPWMVRLT
Trigger: TGTCAGCCTGACCATCCAGGGGGTGACGGCCGAGGACTCGGGCAAGTACAGCATCAACGTGAAGAATAAATACGGAGGAGAGAAGATCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS TCA 72 bp GACTGCTGCCCGAGTAAACGGGAGCTTTCCACAGAATaGCCAGAGAAGTGTCTCGGACCTCACAGAACGTCA +
Preference number: 6 (lower is better)
Translates to: DCCPSKRELSTE*PEKCLGPHRTS
Trigger: TGACGTTCTGTGAGGTCCGAGACACTTCTCTGGTCATTCTGTGGAAAGCTCCCGTTTACTCGGGCAGCAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS TCA 72 bp CCTCATCAGCGATCTCCTCGTAGGCCTTACACCAGGTaGACTGCGAGGCATCTGTCATTTCCTGGCAGTCAA +
Preference number: 6 (lower is better)
Translates to: PHQRSPRRPYTR*TARHLSFPGSQ
Trigger: TTGACTGCCAGGAAATGACAGATGCCTCGCAGTTCACCTGGTGTAAGGCCTACGAGGAGATCGCTGATGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS TCA 72 bp CCTTGCCGCGATTCTTCTCTGCAAAAGCAGCAGCCTTaGGCTGCTGGAACTCAGCGTAGGCTTCGTCAAAAG +
Preference number: 6 (lower is better)
Translates to: PCRDSSLQKQQP*AAGTQRRLRQK
Trigger: CTTTTGACGAAGCCTACGCTGAGTTCCAGCAGCTCAAGGCTGCTGCTTTTGCAGAGAAGAATCGCGGCAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS GCA 72 bp TCTTTGTACCATTGCACCACAGGCGTGGGGAATCCTTaGACAGTGAAACAGAGCCTCACAGACATCCGCTCC +
Preference number: 6 (lower is better)
Translates to: SLYHCTTGVGNP*TVKQSLTDIRS
Trigger: GGAGCGGATGTCTGTGAGGCTCTGTTTCACTGTGCAAGGATTCCCCACGCCTGTGGTGCAATGGTACAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS GCA 72 bp GTGTCCTCAAAGTTGGCCCTGTTGATCTCCAGAGTGTaGACTCCGTACCTGCTCTCAATCCGGTACTTGCCT +
Preference number: 6 (lower is better)
Translates to: VSSKLALLISRV*TPYLLSIRYLP
Trigger: AGGCAAGTACCGGATTGAGAGCAGGTACGGAGTGCACACTCTGGAGATCAACAGGGCCAACTTTGAGGACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS CCA 72 bp AGTGGGTCAGCATCTCTGACAAACATGAAAGCGCTGTaGTCGCTGACTCCACCCCGGGACACAATCCTCAAA +
Preference number: 6 (lower is better)
Translates to: SGSASLTNMKAL*SLTPPRDTILK
Trigger: TTTGAGGATTGTGTCCCGGGGTGGAGTCAGCGACCACAGCGCTTTCATGTTTGTCAGAGATGCTGACCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS CCA 72 bp CCCAGCAGGTCCTCTTCATGCTTTGGTCTGTCCCACTaGACTACGACGGATGTCTTTGTATTCCTGGAGGCA +
Preference number: 6 (lower is better)
Translates to: PSRSSSCFGLSH*TTTDVFVFLEA
Trigger: TGCCTCCAGGAATACAAAGACATCCGTCGTAGTCCAGTGGGACAGACCAAAGCATGAAGAGGACCTGCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS CAA 72 bp GTCTTTGTACCATTGCACCACAGGCGTGGGGAATCCTaGCACAGTGAAACAGAGCCTCACAGACATCCGCTC +
Preference number: 6 (lower is better)
Translates to: VFVPLHHRRGES*HSETEPHRHPL
Trigger: GAGCGGATGTCTGTGAGGCTCTGTTTCACTGTGCAAGGATTCCCCACGCCTGTGGTGCAATGGTACAAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS CAA 72 bp GAGGCCTGGCCTTCTCCAAAGAACATCTTGGTCCACTaGGACTCTTTCAGCAGCACATCATCCCGGTACCAC +
Preference number: 6 (lower is better)
Translates to: EAWPSPKNILVH*DSFSSTSSRYH
Trigger: GTGGTACCGGGATGATGTGCTGCTGAAAGAGTCCAAGTGGACCAAGATGTTCTTTGGAGAAGGCCAGGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS CAA 72 bp ACTGCAGACTTCTCGATGAAGTACATTAAGGGATCCTaGCCGCGGGGAGATGGAGGATCCCAGCTGAGGACA +
Preference number: 6 (lower is better)
Translates to: TADFSMKYIKGS*PRGDGGSQLRT
Trigger: TGTCCTCAGCTGGGATCCTCCATCTCCCCGCGGCAAGGATCCCTTAATGTACTTCATCGAGAAGTCTGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS CAA 72 bp TCACTGGGATCCGATGGCTGCCCGATCCCAGCCAGGTaGGTAGCAGCAATTTTGAACTCATACAAGGAGCCT +
Preference number: 6 (lower is better)
Translates to: SLGSDGCPIPAR*VAAILNSYKEP
Trigger: AGGCTCCTTGTATGAGTTCAAAATTGCTGCTACCAACCTGGCTGGGATCGGGCAGCCATCGGATCCCAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS CAA 72 bp GCTGCAGGTCACAGACCTTTAAGTAGCGATTTGGAGTaGCTGCCTCGCTGGTGGTCTTCCACTCCCCAGAAT +
Preference number: 6 (lower is better)
Translates to: AAGHRPLSSDLE*LPRWWSSTPQN
Trigger: ATTCTGGGGAGTGGAAGACCACCAGCGAGGCAGCAACTCCAAATCGCTACTTAAAGGTCTGTGACCTGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS CAA 90 bp CTGACAGTGACATCGATCTTCTCTCCTCCGTATTTATTCTTCACGTaGATGCTGTACTTGCCCGAGTCCTCGGCCGTCACCCCCTGGATG +
Preference number: 6 (lower is better)
Translates to: LTVTSIFSPPYLFFT*MLYLPESSAVTPWM
Trigger: CATCCAGGGGGTGACGGCCGAGGACTCGGGCAAGTACAGCATCAACGTGAAGAATAAATACGGAGGAGAGAAGATCGATGTCACTGTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS CCA 72 bp AGGCCTGGCCTTCTCCAAAGAACATCTTGGTCCACTTaGACTCTTTCAGCAGCACATCATCCCGGTACCACT +
Preference number: 6 (lower is better)
Translates to: RPGLLQRTSWST*TLSAAHHPGTT
Trigger: AGTGGTACCGGGATGATGTGCTGCTGAAAGAGTCCAAGTGGACCAAGATGTTCTTTGGAGAAGGCCAGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS CCA 72 bp GTCCACATAGTAGCCCAGCAGGTCCTCTTCATGCTTTaGTCTGTCCCACTGGACTACGACGGATGTCTTTGT +
Preference number: 6 (lower is better)
Translates to: VHIVAQQVLFML*SVPLDYDGCLC
Trigger: ACAAAGACATCCGTCGTAGTCCAGTGGGACAGACCAAAGCATGAAGAGGACCTGCTGGGCTACTATGTGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS CAA 72 bp GGCTGCCCGATCCCAGCCAGGTTGGTAGCAGCAATTTaGAACTCATACAAGGAGCCTTCAGTCAAACCTTCC +
Preference number: 6 (lower is better)
Translates to: GCPIPARLVAAI*NSYKEPSVKPS
Trigger: GGAAGGTTTGACTGAAGGCTCCTTGTATGAGTTCAAAATTGCTGCTACCAACCTGGCTGGGATCGGGCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS CAA 72 bp ATTATGGTCACCACGTCTGGTAAGCCGCCAATCACCTaGCCGCGATTCTTCTCTGCAAAAGCAGCAGCCTTG +
Preference number: 6 (lower is better)
Translates to: IMVTTSGKPPIT*PRFFSAKAAAL
Trigger: CAAGGCTGCTGCTTTTGCAGAGAAGAATCGCGGCAAGGTGATTGGCGGCTTACCAGACGTGGTGACCATAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS CAA 72 bp ATCTTCACCAAGAAGTGCTCGCTGAGCTCAATGTCCTaGTCGTTCTTAAACCAGACCACCTCAGGGTCGGGG +
Preference number: 6 (lower is better)
Translates to: IFTKKCSLSSMS*SFLNQTTSGSG
Trigger: CCCCGACCCTGAGGTGGTCTGGTTTAAGAACGACAAGGACATTGAGCTCAGCGAGCACTTCTTGGTGAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS CAA 90 bp GCCCTGCTCATTCGGTCTTCAAATGAGTGTCTCTCCCACGCCAGATaGTCTTCCACCGTCTGCTCCATGAAGTACTTGTCTAGCTTGTCC +
Preference number: 6 (lower is better)
Translates to: ALLIRSSNECLSHAR*SSTVCSMKYLSSLS
Trigger: GGACAAGCTAGACAAGTACTTCATGGAGCAGACGGTGGAAGACAATCTGGCGTGGGAGAGACACTCATTTGAAGACCGAATGAGCAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS CAA 90 bp GGATCCGATGGCTGCCCGATCCCAGCCAGGTTGGTAGCAGCAATTTaGAACTCATACAAGGAGCCTTCAGTCAAACCTTCCACCGTTAAG +
Preference number: 6 (lower is better)
Translates to: GSDGCPIPARLVAAI*NSYKEPSVKPSTVK
Trigger: CTTAACGGTGGAAGGTTTGACTGAAGGCTCCTTGTATGAGTTCAAAATTGCTGCTACCAACCTGGCTGGGATCGGGCAGCCATCGGATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS CAA 90 bp GACTGCTCCATCTTCACCAAGAAGTGCTCGCTGAGCTCAATGTCCTaGTCGTTCTTAAACCAGACCACCTCAGGGTCGGGGTTTCCAAAC +
Preference number: 6 (lower is better)
Translates to: DCSIFTKKCSLSSMS*SFLNQTTSGSGFPN
Trigger: GTTTGGAAACCCCGACCCTGAGGTGGTCTGGTTTAAGAACGACAAGGACATTGAGCTCAGCGAGCACTTCTTGGTGAAGATGGAGCAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS CAA 90 bp TGGTGGCTGTCTTTGCCATCGAAAATCTCAAACGTGTATTTCCCCTaGTCCTTCTCTGTGGGCTCACAGATCTGCAGCCATGCCATCTCC +
Preference number: 6 (lower is better)
Translates to: WWLSLPSKISNVYFP*SFSVGSQICSHAIS
Trigger: GGAGATGGCATGGCTGCAGATCTGTGAGCCCACAGAGAAGGACAAGGGGAAATACACGTTTGAGATTTTCGATGGCAAAGACAGCCACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS CAA 90 bp TTGGCCTGCTGGGGAGGTGAGATGTCTGGGATCTTCTCCCCGTGTTaGTACACACTGACAGTGACATCGATCTTCTCTCCTCCGTATTTA +
Preference number: 6 (lower is better)
Translates to: LACWGGEMSGIFSPC*YTLTVTSIFSPPYL
Trigger: TAAATACGGAGGAGAGAAGATCGATGTCACTGTCAGTGTGTACAAACACGGGGAGAAGATCCCAGACATCTCACCTCCCCAGCAGGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS GCA 72 bp AAGTCCGGTGACGGGGTACTTGCAGATCTTTACTGGTaGATCGTTACACTGGACCCAGTTGTTAGTTCCCAC +
Preference number: 6 (lower is better)
Translates to: KSGDGVLADLYW*IVTLDPVVSSH
Trigger: GTGGGAACTAACAACTGGGTCCAGTGTAACGATGCACCAGTAAAGATCTGCAAGTACCCCGTCACCGGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS CCA 72 bp TCGTCAAAAGCTTGTCCAGAGAGGTCCAGCGAGCGTTaGTGGCTGTCTTTGCCATCGAAAATCTCAAACGTG +
Preference number: 6 (lower is better)
Translates to: SSKACPERSSER*WLSLPSKISNV
Trigger: CACGTTTGAGATTTTCGATGGCAAAGACAGCCACCAACGCTCGCTGGACCTCTCTGGACAAGCTTTTGACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS CAA 72 bp TGTCCAGAGAGGTCCAGCGAGCGTTGGTGGCTGTCTTaGCCATCGAAAATCTCAAACGTGTATTTCCCCTTG +
Preference number: 6 (lower is better)
Translates to: CPERSSERWWLS*PSKISNVYFPL
Trigger: CAAGGGGAAATACACGTTTGAGATTTTCGATGGCAAAGACAGCCACCAACGCTCGCTGGACCTCTCTGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS CAA 72 bp ACATCGATCTTCTCTCCTCCGTATTTATTCTTCACGTaGATGCTGTACTTGCCCGAGTCCTCGGCCGTCACC +
Preference number: 6 (lower is better)
Translates to: TSIFSPPYLFFT*MLYLPESSAVT
Trigger: GGTGACGGCCGAGGACTCGGGCAAGTACAGCATCAACGTGAAGAATAAATACGGAGGAGAGAAGATCGATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS CAA 72 bp TGGGGAGGTGAGATGTCTGGGATCTTCTCCCCGTGTTaGTACACACTGACAGTGACATCGATCTTCTCTCCT +
Preference number: 6 (lower is better)
Translates to: WGGEMSGIFSPC*YTLTVTSIFSP
Trigger: AGGAGAGAAGATCGATGTCACTGTCAGTGTGTACAAACACGGGGAGAAGATCCCAGACATCTCACCTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS CAA 90 bp TTGAAATGCTCACTGGGATCCGATGGCTGCCCGATCCCAGCCAGGTaGGTAGCAGCAATTTTGAACTCATACAAGGAGCCTTCAGTCAAA +
Preference number: 6 (lower is better)
Translates to: LKCSLGSDGCPIPAR*VAAILNSYKEPSVK
Trigger: TTTGACTGAAGGCTCCTTGTATGAGTTCAAAATTGCTGCTACCAACCTGGCTGGGATCGGGCAGCCATCGGATCCCAGTGAGCATTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS TCA 72 bp GGTAGACACTTGTCCATGGGAATTAGTTGCTACTGCTaGATAGGTGGCGGTGTCCTCAAAGTTGGCCCTGTT +
Preference number: 6 (lower is better)
Translates to: GRHLSMGISCYC*IGGGVLKVGPV
Trigger: AACAGGGCCAACTTTGAGGACACCGCCACCTATTCAGCAGTAGCAACTAATTCCCATGGACAAGTGTCTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS TCA 72 bp GCTTTCCTGGTCCACTGGCATTCACTGCTCGAATTCTaGATACATAGGTCTTACCCTGCTGCAGGTCACAGA +
Preference number: 6 (lower is better)
Translates to: AFLVHWHSLLEF*IHRSYPAAGHR
Trigger: TCTGTGACCTGCAGCAGGGTAAGACCTATGTATTCAGAATTCGAGCAGTGAATGCCAGTGGACCAGGAAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS TCA 72 bp TTCTTAAAGTACAGCTTTGAGTGGTCACCCTCCGTGTaGACCTCAAATCGCTCCTCATCAGCGATCTCCTCG +
Preference number: 6 (lower is better)
Translates to: FLKYSFEWSPSV*TSNRSSSAISS
Trigger: CGAGGAGATCGCTGATGAGGAGCGATTTGAGGTTCACACGGAGGGTGACCACTCAAAGCTGTACTTTAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS CCA 72 bp GCTCTCTTCGAAGAGGACCTCTCTGTAAGAGACCTCTaGGAGGATGACTGGGTGGTTGCTTGCTTTTTCAAT +
Preference number: 6 (lower is better)
Translates to: ALFEEDLSVRDL*EDDWVVACFFN
Trigger: ATTGAAAAAGCAAGCAACCACCCAGTCATCCTCCCAGAGGTCTCTTACAGAGAGGTCCTCTTCGAAGAGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS CCA 72 bp GAAAAGTCCGGTGACGGGGTACTTGCAGATCTTTACTaGTGCATCGTTACACTGGACCCAGTTGTTAGTTCC +
Preference number: 6 (lower is better)
Translates to: EKSGDGVLADLY*CIVTLDPVVSS
Trigger: GGAACTAACAACTGGGTCCAGTGTAACGATGCACCAGTAAAGATCTGCAAGTACCCCGTCACCGGACTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS CAA 72 bp TCTTCTCCTCGGTACCTTCTCACCACCACCGCAGCATaGGTAGACACTTGTCCATGGGAATTAGTTGCTACT +
Preference number: 6 (lower is better)
Translates to: SSPRYLLTTTAA*VDTCPWELVAT
Trigger: AGTAGCAACTAATTCCCATGGACAAGTGTCTACCAATGCTGCGGTGGTGGTGAGAAGGTACCGAGGAGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS CAA 72 bp GTGTGTACGGGATCACAGATGAAAGGGGCAATCCAATaGGGAGTCCTACTGAGTGGAAAGGTTCCTCTTCTC +
Preference number: 6 (lower is better)
Translates to: VCTGSQMKGAIQ*GVLLSGKVPLL
Trigger: GAGAAGAGGAACCTTTCCACTCAGTAGGACTCCCAATTGGATTGCCCCTTTCATCTGTGATCCCGTACACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS CAA 90 bp ATCCTGGTAGATGACGATTTCTTTCTCTCCTTCCAAATGAATCGCTaGCAATCTTCTGAGGTCAACAGGGTCAAGGGCGGCCACAGCATC +
Preference number: 6 (lower is better)
Translates to: ILVDDDFFLSFQMNR*QSSEVNRVKGGHSI
Trigger: GATGCTGTGGCCGCCCTTGACCCTGTTGACCTCAGAAGATTGCAAGCGATTCATTTGGAAGGAGAGAAAGAAATCGTCATCTACCAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS GCA 72 bp GTACCACAAACCTGTTATATCCAATGGGTTTGTGGTTaGATGGTTCCCACATGTTTGTTCCCGCCACACAGC +
Preference number: 6 (lower is better)
Translates to: VPQTCYIQWVCG*MVPTCLFPPHS
Trigger: GCTGTGTGGCGGGAACAAACATGTGGGAACCATGCAACCACAAACCCATTGGATATAACAGGTTTGTGGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS CCA 72 bp GTGTTATCTCTGATGGGTCACTCAGGCCATGTTTATTaGCTGACAAAACCCGGAACACGTAGGACTTCCCTT +
Preference number: 6 (lower is better)
Translates to: VLSLMGHSGHVY*LTKPGTRRTSL
Trigger: AAGGGAAGTCCTACGTGTTCCGGGTTTTGTCAGCCAATAAACATGGCCTGAGTGACCCATCAGAGATAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS CCA 72 bp TCAAAAGCTTGTCCAGAGAGGTCCAGCGAGCGTTGGTaGCTGTCTTTGCCATCGAAAATCTCAAACGTGTAT +
Preference number: 6 (lower is better)
Translates to: SKACPERSSERW*LSLPSKISNVY
Trigger: ATACACGTTTGAGATTTTCGATGGCAAAGACAGCCACCAACGCTCGCTGGACCTCTCTGGACAAGCTTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS CAA 72 bp ATTCGGTCTTCAAATGAGTGTCTCTCCCACGCCAGATaGTCTTCCACCGTCTGCTCCATGAAGTACTTGTCT +
Preference number: 6 (lower is better)
Translates to: IRSSNECLSHAR*SSTVCSMKYLS
Trigger: AGACAAGTACTTCATGGAGCAGACGGTGGAAGACAATCTGGCGTGGGAGAGACACTCATTTGAAGACCGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS CAA 72 bp AAGCCGTGTACCACAAACCTGTTATATCCAATGGGTTaGTGGTTGCATGGTTCCCACATGTTTGTTCCCGCC +
Preference number: 6 (lower is better)
Translates to: KPCTTNLLYPMG*WLHGSHMFVPA
Trigger: GGCGGGAACAAACATGTGGGAACCATGCAACCACAAACCCATTGGATATAACAGGTTTGTGGTACACGGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS CAA 72 bp CCTTCAGTCAAACCTTCCACCGTTAAGATCCTCTCTTaGACAGGTGAAGAGTTGACCTCGTGCCAGTTCTTG +
Preference number: 6 (lower is better)
Translates to: PSVKPSTVKILS*TGEELTSCQFL
Trigger: CAAGAACTGGCACGAGGTCAACTCTTCACCTGTCAAAGAGAGGATCTTAACGGTGGAAGGTTTGACTGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS GCA 72 bp CTGACATACTTGGACTGCTCCATCTTCACCAAGAAGTaGTCGCTGAGCTCAATGTCCTTGTCGTTCTTAAAC +
Preference number: 6 (lower is better)
Translates to: LTYLDCSIFTKK*SLSSMSLSFLN
Trigger: GTTTAAGAACGACAAGGACATTGAGCTCAGCGAGCACTTCTTGGTGAAGATGGAGCAGTCCAAGTATGTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS CAA 72 bp TCTTTGCCATCGAAAATCTCAAACGTGTATTTCCCCTaGTCCTTCTCTGTGGGCTCACAGATCTGCAGCCAT +
Preference number: 6 (lower is better)
Translates to: SLPSKISNVYFP*SFSVGSQICSH
Trigger: ATGGCTGCAGATCTGTGAGCCCACAGAGAAGGACAAGGGGAAATACACGTTTGAGATTTTCGATGGCAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS TCA 72 bp CAACCTTACAGACAAGCCGAACTTCACACTCTTCAGTaGCATCCCAGTGCAAATATTCAGCAAAATGAGGGC +
Preference number: 6 (lower is better)
Translates to: QPYRQAELHTLQ*HPSANIQQNEG
Trigger: GCCCTCATTTTGCTGAATATTTGCACTGGGATGTCACTGAAGAGTGTGAAGTTCGGCTTGTCTGTAAGGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS TCA 72 bp TTGGTCCAGGAGGTACCTGGTTTGGATGTTTCGATATaGCTGGTCAAAGTGCTTGTGTCTTTTCTGGTAGAA +
Preference number: 6 (lower is better)
Translates to: LVQEVPGLDVSI*LVKVLVSFLVE
Trigger: TTCTACCAGAAAAGACACAAGCACTTTGACCAGTCATATCGAAACATCCAAACCAGGTACCTCCTGGACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS CCA 72 bp GATGACTGGGTGGTTGCTTGCTTTTTCAATGCATATTaGTCCAGGAGGTACCTGGTTTGGATGTTTCGATAT +
Preference number: 6 (lower is better)
Translates to: DDWVVACFFNAY*SRRYLVWMFRY
Trigger: ATATCGAAACATCCAAACCAGGTACCTCCTGGACCAATATGCATTGAAAAAGCAAGCAACCACCCAGTCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS CAA 72 bp ACATCGTCCTTGAGCCATTTGAAAACAGTTTCCCTCTaGGTGTTTGCAACCTTACAGACAAGCCGAACTTCA +
Preference number: 6 (lower is better)
Translates to: TSSLSHLKTVSL*VFATLQTSRTS
Trigger: TGAAGTTCGGCTTGTCTGTAAGGTTGCAAACACCAAGAGGGAAACTGTTTTCAAATGGCTCAAGGACGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS CCA 72 bp CTTGCTTTTTCAATGCATATTGGTCCAGGAGGTACCTaGTTTGGATGTTTCGATATGACTGGTCAAAGTGCT +
Preference number: 6 (lower is better)
Translates to: LAFSMHIGPGGT*FGCFDMTGQSA
Trigger: AGCACTTTGACCAGTCATATCGAAACATCCAAACCAGGTACCTCCTGGACCAATATGCATTGAAAAAGCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4
CDS CCA 72 bp TTTTTCAATGCATATTGGTCCAGGAGGTACCTGGTTTaGATGTTTCGATATGACTGGTCAAAGTGCTTGTGT +
Preference number: 6 (lower is better)
Translates to: FFNAYWSRRYLV*MFRYDWSKCLC
Trigger: ACACAAGCACTTTGACCAGTCATATCGAAACATCCAAACCAGGTACCTCCTGGACCAATATGCATTGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033842.4