Pregenerated sensors for MYOG (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026459Ensembl transcript IDs: ENSMUST00000027730.6
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAAGGTTCCCAAGATCCACTGCAAATGCTTGGCCCCCAGAGGCTTTaGAACCGGATAGCTCCTCCCCCTTCTCTCTCAACTCAGGGCAGG | + |
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Preference number: 1 (lower is better) Translates to: EGSQDPLQMLGPQRL*NRIAPPPSLSTQGR Trigger: CCTGCCCTGAGTTGAGAGAGAAGGGGGAGGAGCTATCCGGTTCCAAAGCCTCTGGGGGCCAAGCATTTGCAGTGGATCTTGGGAACCTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000027730.6 |
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| 3UTR CCA 90 bp | AATACACAAAGCACTGGAAGGTTCCCAAGATCCACTGCAAATGCTTaGCCCCCAGAGGCTTTGGAACCGGATAGCTCCTCCCCCTTCTCT | + |
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Preference number: 1 (lower is better) Translates to: NTQSTGRFPRSTANA*PPEALEPDSSSPFS Trigger: AGAGAAGGGGGAGGAGCTATCCGGTTCCAAAGCCTCTGGGGGCCAAGCATTTGCAGTGGATCTTGGGAACCTTCCAGTGCTTTGTGTATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000027730.6 |
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| 3UTR CCA 90 bp | GCTCCTGAGTTTGCCCCACTGAGGGACATTAACAAGGGGGCTCTCTaGACTCCATCTTTCTCTCCTCAGAAGAGGATGCTCTCTGCTTTA | + |
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Preference number: 1 (lower is better) Translates to: APEFAPLRDINKGAL*TPSFSPQKRMLSAL Trigger: TAAAGCAGAGAGCATCCTCTTCTGAGGAGAGAAAGATGGAGTCCAGAGAGCCCCCTTGTTAATGTCCCTCAGTGGGGCAAACTCAGGAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027730.6 |
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| 3UTR CCA 90 bp | AGCTTTACAAACAACACACAAAACAATAAACAATACACAAAGCACTaGAAGGTTCCCAAGATCCACTGCAAATGCTTGGCCCCCAGAGGC | + |
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Preference number: 1 (lower is better) Translates to: SFTNNTQNNKQYTKH*KVPKIHCKCLAPRG Trigger: GCCTCTGGGGGCCAAGCATTTGCAGTGGATCTTGGGAACCTTCCAGTGCTTTGTGTATTGTTTATTGTTTTGTGTGTTGTTTGTAAAGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027730.6 |
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| 3UTR-3UTR CCA 90 bp | CACAAAGCACTGGAAGGTTCCCAAGATCCACTGCAAATGCTTGGCCCCCAGAGGGGGGAGTGGGGAGTCTaGCTTGTGGCAGCCCAGGGC | + |
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Preference number: 2 (lower is better) Translates to: HKALEGSQDPLQMLGPQRGEWGV*LVAAQG Trigger: GCCCTGGGCTGCCACAAGCCAGACTCCCCACTCCCC...CCTCTGGGGGCCAAGCATTTGCAGTGGATCTTGGGAACCTTCCAGTGCTTTGTG 61% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000027730.6 |
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| 3UTR CAA 90 bp | GGAAGGTTCCCAAGATCCACTGCAAATGCTTGGCCCCCAGAGGCTTaGGAACCGGATAGCTCCTCCCCCTTCTCTCTCAACTCAGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: GRFPRSTANAWPPEA*EPDSSSPFSLNSGQ Trigger: CTGCCCTGAGTTGAGAGAGAAGGGGGAGGAGCTATCCGGTTCCAAAGCCTCTGGGGGCCAAGCATTTGCAGTGGATCTTGGGAACCTTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000027730.6 |
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| 3UTR-3UTR CCA 90 bp | GAGGATGCTCTCTGCTTTAAGGAGTCAGCTAAATTCCCTCGCTGGGCTGGGTGTGGGGAGTCTGGCTTGTaGCAGCCCAGGGCTGTTTTC | + |
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Preference number: 2 (lower is better) Translates to: EDALCFKESAKFPRWAGCGESGL*QPRAVF Trigger: GAAAACAGCCCTGGGCTGCCACAAGCCAGACTCCCC...ACACCCAGCCCAGCGAGGGAATTTAGCTGACTCCTTAAAGCAGAGAGCATCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027730.6 |
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| 3UTR-3UTR GCA 90 bp | ACAGATGTGCACACTTGTCCAGGTCAGGGCACTCATGTCTCTCAAACGGTTTCAACTTGGGGGCTCACATaGACACCCAGCCTGACAGAC | + |
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Preference number: 2 (lower is better) Translates to: TDVHTCPGQGTHVSQTVSTWGLT*TPSLTD Trigger: GTCTGTCAGGCTGGGTGTGCATGTGAGCCCCCAAGT...TGAAACCGTTTGAGAGACATGAGTGCCCTGACCTGGACAAGTGTGCACATCTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027730.6 |
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| 3UTR-3UTR TCA 90 bp | ACTGGAAGGTTCCCAAGATCCACTGCAAATGCTTGGCCCCCAGAGGCTTTGGAACCCCTGCTACAGAAGTaGTGGCTTTTGACACCAACT | + |
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Preference number: 2 (lower is better) Translates to: TGRFPRSTANAWPPEALEPLLQK*WLLTPT Trigger: AGTTGGTGTCAAAAGCCATCACTTCTGTAGCAGGGG...TTCCAAAGCCTCTGGGGGCCAAGCATTTGCAGTGGATCTTGGGAACCTTCCAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027730.6 |
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| 3UTR-3UTR TCA 90 bp | TACACAAAGCACTGGAAGGTTCCCAAGATCCACTGCAAATGCTTGGCCCCCAGAGGTGTTAGCCTTATGTaGATGGGGAGTGGGGAGTCT | + |
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Preference number: 2 (lower is better) Translates to: YTKHWKVPKIHCKCLAPRGVSLM*MGSGES Trigger: AGACTCCCCACTCCCCATTCACATAAGGCTAACACC...TCTGGGGGCCAAGCATTTGCAGTGGATCTTGGGAACCTTCCAGTGCTTTGTGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027730.6 |
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| 3UTR-3UTR TCA 90 bp | ACAGATGTGCACACTTGTCCAGGTCAGGGCACTCATGTCTCTCAAACGGTTTCACTGAGTTTGCCCCACTaGGGGACATTAACAAGGGGG | + |
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Preference number: 2 (lower is better) Translates to: TDVHTCPGQGTHVSQTVSLSLPH*GTLTRG Trigger: CCCCCTTGTTAATGTCCCTCAGTGGGGCAAACTCAG...TGAAACCGTTTGAGAGACATGAGTGCCCTGACCTGGACAAGTGTGCACATCTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027730.6 |
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| 3UTR-3UTR CCA 90 bp | AGACTAGAACAGATGTGCACACTTGTCCAGGTCAGGGCACTCATGTCTCTCAAATTAGCCTTATGTGAATaGGGAGTGGGGAGTCTGGCT | + |
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Preference number: 2 (lower is better) Translates to: RLEQMCTLVQVRALMSLKLALCE*GVGSLA Trigger: AGCCAGACTCCCCACTCCCCATTCACATAAGGCTAA...TTTGAGAGACATGAGTGCCCTGACCTGGACAAGTGTGCACATCTGTTCTAGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027730.6 |
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| 3UTR-3UTR CCA 90 bp | ATAAACAATACACAAAGCACTGGAAGGTTCCCAAGATCCACTGCAAATGCTTGGCTTTTGACACCAACTTaGGGGCTCACATGCACACCC | + |
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Preference number: 2 (lower is better) Translates to: INNTQSTGRFPRSTANAWLLTPT*GLTCTP Trigger: GGGTGTGCATGTGAGCCCCCAAGTTGGTGTCAAAAG...CCAAGCATTTGCAGTGGATCTTGGGAACCTTCCAGTGCTTTGTGTATTGTTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027730.6 |
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| 3UTR CCA 72 bp | ATTCCCTCGCTGGGCTGGGTGTTAGCCTTATGTGAATaGGGAGTGGGGAGTCTGGCTTGTGGCAGCCCAGGG | + |
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Preference number: 3 (lower is better) Translates to: IPSLGWVLALCE*GVGSLACGSPG Trigger: CCCTGGGCTGCCACAAGCCAGACTCCCCACTCCCCATTCACATAAGGCTAACACCCAGCCCAGCGAGGGAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027730.6 |
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| 3UTR-3UTR CAA 90 bp | AGTGGGGAGTCTGGCTTGTGGCAGCCCAGGGCTGTTTTCTGGACATCAGGACAGGCTTTTGACACCAACTaGGGGGCTCACATGCACACC | + |
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Preference number: 3 (lower is better) Translates to: SGESGLWQPRAVFWTSGQAFDTN*GAHMHT Trigger: GGTGTGCATGTGAGCCCCCAAGTTGGTGTCAAAAGC...CTGTCCTGATGTCCAGAAAACAGCCCTGGGCTGCCACAAGCCAGACTCCCCACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000027730.6 |
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| 3UTR-3UTR CAA 90 bp | AACAAGGGGGCTCTCTGGACTCCATCTTTCTCTCCTCAGAAGAGGATGCTCTCTAGTGGGGAGTCTGGCTaGTGGCAGCCCAGGGCTGTT | + |
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Preference number: 3 (lower is better) Translates to: NKGALWTPSFSPQKRMLSSGESG*WQPRAV Trigger: AACAGCCCTGGGCTGCCACAAGCCAGACTCCCCACT...AGAGAGCATCCTCTTCTGAGGAGAGAAAGATGGAGTCCAGAGAGCCCCCTTGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027730.6 |
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| 3UTR CCA 72 bp | AGCACTGGAAGGTTCCCAAGATCCACTGCAAATGCTTaGCCCCCAGAGGCTTTGGAACCGGATAGCTCCTCC | + |
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Preference number: 3 (lower is better) Translates to: STGRFPRSTANA*PPEALEPDSSS Trigger: GGAGGAGCTATCCGGTTCCAAAGCCTCTGGGGGCCAAGCATTTGCAGTGGATCTTGGGAACCTTCCAGTGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027730.6 |
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| 3UTR CCA 72 bp | CAAGATCCACTGCAAATGCTTGGCCCCCAGAGGCTTTaGAACCGGATAGCTCCTCCCCCTTCTCTCTCAACT | + |
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Preference number: 3 (lower is better) Translates to: QDPLQMLGPQRL*NRIAPPPSLST Trigger: AGTTGAGAGAGAAGGGGGAGGAGCTATCCGGTTCCAAAGCCTCTGGGGGCCAAGCATTTGCAGTGGATCTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000027730.6 |
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| 3UTR CCA 72 bp | TTTGCCCCACTGAGGGACATTAACAAGGGGGCTCTCTaGACTCCATCTTTCTCTCCTCAGAAGAGGATGCTC | + |
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Preference number: 3 (lower is better) Translates to: FAPLRDINKGAL*TPSFSPQKRML Trigger: GAGCATCCTCTTCTGAGGAGAGAAAGATGGAGTCCAGAGAGCCCCCTTGTTAATGTCCCTCAGTGGGGCAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027730.6 |
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| 3UTR GCA 72 bp | GACTCCATCTTTCTCTCCTCAGAAGAGGATGCTCTCTaGTTTAAGGAGTCAGCTAAATTCCCTCGCTGGGCT | + |
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Preference number: 3 (lower is better) Translates to: DSIFLSSEEDAL*FKESAKFPRWA Trigger: AGCCCAGCGAGGGAATTTAGCTGACTCCTTAAAGCAGAGAGCATCCTCTTCTGAGGAGAGAAAGATGGAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027730.6 |
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| CDS-3UTR CCA 90 bp | GCTACAGAAGTGATGGCTTTTGACACCAACTTGGGGGCTCACATGCACACCCAGATTCACTGGGCACCATaGGCTGGGGCCCGCCCCCGC | + |
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Preference number: 4 (lower is better) Translates to: ATEVMAFDTNLGAHMHTQIHWAP*AGARPR Trigger: GCGGGGGCGGGCCCCAGCCCATGGTGCCCAGTGAAT...CTGGGTGTGCATGTGAGCCCCCAAGTTGGTGTCAAAAGCCATCACTTCTGTAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000027730.6 |
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| CDS-3UTR GCA 90 bp | ACACAAAGCACTGGAAGGTTCCCAAGATCCACTGCAAATGCTTGGCCCCCAGAGTGCCCCACTCCGGACTaGAGGAGGCGCTGTGGGAGT | + |
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Preference number: 4 (lower is better) Translates to: TQSTGRFPRSTANAWPPECPTPD*RRRCGS Trigger: ACTCCCACAGCGCCTCCTGCAGTCCGGAGTGGGGCA...CTCTGGGGGCCAAGCATTTGCAGTGGATCTTGGGAACCTTCCAGTGCTTTGTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027730.6 |
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| CDS-3UTR CCA 90 bp | ACTGGAAGGTTCCCAAGATCCACTGCAAATGCTTGGCCCCCAGAGGCTTTGGAACGGCAGGCACTGGCCTaGACAATGCTCAGGGGTCCC | + |
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Preference number: 4 (lower is better) Translates to: TGRFPRSTANAWPPEALERQALA*TMLRGP Trigger: GGGACCCCTGAGCATTGTCCAGGCCAGTGCCTGCCG...TTCCAAAGCCTCTGGGGGCCAAGCATTTGCAGTGGATCTTGGGAACCTTCCAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027730.6 |
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| CDS-3UTR CCA 90 bp | ACACAAAGCACTGGAAGGTTCCCAAGATCCACTGCAAATGCTTGGCCCCCAGAGGCCCACGGCAGGCACTaGCCTGGACAATGCTCAGGG | + |
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Preference number: 4 (lower is better) Translates to: TQSTGRFPRSTANAWPPEAHGRH*PGQCSG Trigger: CCCTGAGCATTGTCCAGGCCAGTGCCTGCCGTGGGC...CTCTGGGGGCCAAGCATTTGCAGTGGATCTTGGGAACCTTCCAGTGCTTTGTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027730.6 |
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| CDS-3UTR CCA 90 bp | CCCAGCCCAGCCACTGGCTTCAGGAAGAGACTAGAACAGATGTGCACACTTGTCGCTTCTCCCTCAGTGTaGCTGCCCTCCTCCGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: PSPATGFRKRLEQMCTLVASPSV*LPSSGP Trigger: TGGACCGGAGGAGGGCAGCCACACTGAGGGAGAAGC...GACAAGTGTGCACATCTGTTCTAGTCTCTTCCTGAAGCCAGTGGCTGGGCTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027730.6 |
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| CDS-3UTR CCA 90 bp | AGTCTGGCTTGTGGCAGCCCAGGGCTGTTTTCTGGACATCAGGACAGCCCCACTAGGGAGTGCAGATTGTaGGCGTCTGTAGGGTCAGCC | + |
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Preference number: 4 (lower is better) Translates to: SLACGSPGLFSGHQDSPTRECRL*ASVGSA Trigger: GGCTGACCCTACAGACGCCCACAATCTGCACTCCCT...AGTGGGGCTGTCCTGATGTCCAGAAAACAGCCCTGGGCTGCCACAAGCCAGACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027730.6 |
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| CDS-3UTR TCA 90 bp | CCAGAGGCTTTGGAACCGGATAGCTCCTCCCCCTTCTCTCTCAACTCAGGGCAGACATATCCTCCACCGTaGTGCTGTCCACGATGGACG | + |
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Preference number: 4 (lower is better) Translates to: PEALEPDSSSPFSLNSGQTYPPP*CCPRWT Trigger: CGTCCATCGTGGACAGCATCACGGTGGAGGATATGT...CTGCCCTGAGTTGAGAGAGAAGGGGGAGGAGCTATCCGGTTCCAAAGCCTCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027730.6 |
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| CDS-3UTR GCA 90 bp | CACAAAGCACTGGAAGGTTCCCAAGATCCACTGCAAATGCTTGGCCCCCAGAGGGGGACCGAACTCCAGTaGATTGCCCCACTCCGGACT | + |
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Preference number: 4 (lower is better) Translates to: HKALEGSQDPLQMLGPQRGTELQ*IAPLRT Trigger: AGTCCGGAGTGGGGCAATGCACTGGAGTTCGGTCCC...CCTCTGGGGGCCAAGCATTTGCAGTGGATCTTGGGAACCTTCCAGTGCTTTGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000027730.6 |
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| CDS-3UTR GCA 90 bp | TGCACACTTGTCCAGGTCAGGGCACTCATGTCTCTCAAACGGTTTCATTTTGGGCTCCCTCAGTGTGGCTaGCCTCCTCCGGTCCACCGA | + |
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Preference number: 4 (lower is better) Translates to: CTLVQVRALMSLKRFHFGLPQCG*PPPVHR Trigger: TCGGTGGACCGGAGGAGGGCAGCCACACTGAGGGAG...CCCAAAATGAAACCGTTTGAGAGACATGAGTGCCCTGACCTGGACAAGTGTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027730.6 |
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| 3UTR CAA 72 bp | CCAAGATCCACTGCAAATGCTTGGCCCCCAGAGGCTTaGGAACCGGATAGCTCCTCCCCCTTCTCTCTCAAC | + |
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Preference number: 4 (lower is better) Translates to: PRSTANAWPPEA*EPDSSSPFSLN Trigger: GTTGAGAGAGAAGGGGGAGGAGCTATCCGGTTCCAAAGCCTCTGGGGGCCAAGCATTTGCAGTGGATCTTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000027730.6 |
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| CDS-3UTR TCA 90 bp | TGCACACTTGTCCAGGTCAGGGCACTCATGTCTCTCAAACGGTTTCATTTTGGGGCCGCTGGTTGGGGTTaGGCAGGGTGCTCCTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: CTLVQVRALMSLKRFHFGAAGWG*AGCSSS Trigger: TGAAGAGGAGCACCCTGCTCAACCCCAACCAGCGGC...CCCAAAATGAAACCGTTTGAGAGACATGAGTGCCCTGACCTGGACAAGTGTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027730.6 |
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| CDS-3UTR GCA 90 bp | ACTAGAACAGATGTGCACACTTGTCCAGGTCAGGGCACTCATGTCTCTCAAACGCACTGGCCTGGACAATaGTCAGGGGTCCCCAGTCCC | + |
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Preference number: 4 (lower is better) Translates to: TRTDVHTCPGQGTHVSQTHWPGQ*SGVPSP Trigger: GGGACTGGGGACCCCTGAGCATTGTCCAGGCCAGTG...CGTTTGAGAGACATGAGTGCCCTGACCTGGACAAGTGTGCACATCTGTTCTAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027730.6 |
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| CDS-3UTR GCA 90 bp | ACTGGAAGGTTCCCAAGATCCACTGCAAATGCTTGGCCCCCAGAGGCTTTGGAACTTACACACCTTACATaGCCACGGCAGGCACTGGCC | + |
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Preference number: 4 (lower is better) Translates to: TGRFPRSTANAWPPEALELTHLT*PRQALA Trigger: GGCCAGTGCCTGCCGTGGGCATGTAAGGTGTGTAAG...TTCCAAAGCCTCTGGGGGCCAAGCATTTGCAGTGGATCTTGGGAACCTTCCAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027730.6 |
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| CDS-3UTR GCA 90 bp | AACAAGGGGGCTCTCTGGACTCCATCTTTCTCTCCTCAGAAGAGGATGCTCTCTCGAACTCCAGTGCATTaGCCCACTCCGGACTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: NKGALWTPSFSPQKRMLSRTPVH*PTPDCR Trigger: CCTGCAGTCCGGAGTGGGGCAATGCACTGGAGTTCG...AGAGAGCATCCTCTTCTGAGGAGAGAAAGATGGAGTCCAGAGAGCCCCCTTGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027730.6 |
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| CDS-3UTR CCA 90 bp | CCACTGAGGGACATTAACAAGGGGGCTCTCTGGACTCCATCTTTCTCTCCTCAGAGGCGCTCAATGTACTaGATGGCGCTGCGCAGGATC | + |
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Preference number: 4 (lower is better) Translates to: PLRDINKGALWTPSFSPQRRSMY*MALRRI Trigger: GATCCTGCGCAGCGCCATCCAGTACATTGAGCGCCT...CTGAGGAGAGAAAGATGGAGTCCAGAGAGCCCCCTTGTTAATGTCCCTCAGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027730.6 |
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| CDS-3UTR CCA 90 bp | CCAGCCACTGGCTTCAGGAAGAGACTAGAACAGATGTGCACACTTGTCCAGGTCAGATCGCGCTCCTCCTaGTTGAGGGAGCTGAGCAAG | + |
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Preference number: 4 (lower is better) Translates to: PATGFRKRLEQMCTLVQVRSRSS*LRELSK Trigger: CTTGCTCAGCTCCCTCAACCAGGAGGAGCGCGATCT...GACCTGGACAAGTGTGCACATCTGTTCTAGTCTCTTCCTGAAGCCAGTGGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027730.6 |
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| CDS-3UTR CCA 90 bp | CTTGGCCCCCAGAGGCTTTGGAACCGGATAGCTCCTCCCCCTTCTCTCTCAACTGGGCATGGTTTCGTCTaGGAAGGCAACAGACATATC | + |
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Preference number: 4 (lower is better) Translates to: LGPQRLWNRIAPPPSLSTGHGFV*EGNRHI Trigger: GATATGTCTGTTGCCTTCCCAGACGAAACCATGCCC...AGTTGAGAGAGAAGGGGGAGGAGCTATCCGGTTCCAAAGCCTCTGGGGGCCAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000027730.6 |
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| CDS-3UTR CCA 90 bp | ACAGATGTGCACACTTGTCCAGGTCAGGGCACTCATGTCTCTCAAACGGTTTCAACTTTAGGCAGCCGCTaGTTGGGGTTGAGCAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: TDVHTCPGQGTHVSQTVSTLGSR*LGLSRV Trigger: CACCCTGCTCAACCCCAACCAGCGGCTGCCTAAAGT...TGAAACCGTTTGAGAGACATGAGTGCCCTGACCTGGACAAGTGTGCACATCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027730.6 |
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| CDS-3UTR CCA 90 bp | AGACTAGAACAGATGTGCACACTTGTCCAGGTCAGGGCACTCATGTCTCTCAAACTGCAGGAGGCGCTGTaGGAGTTGCATTCACTGGGC | + |
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Preference number: 4 (lower is better) Translates to: RLEQMCTLVQVRALMSLKLQEAL*ELHSLG Trigger: GCCCAGTGAATGCAACTCCCACAGCGCCTCCTGCAG...TTTGAGAGACATGAGTGCCCTGACCTGGACAAGTGTGCACATCTGTTCTAGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027730.6 |
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| CDS-3UTR CCA 90 bp | CACAAAGCACTGGAAGGTTCCCAAGATCCACTGCAAATGCTTGGCCCCCAGAGGAATGATCTCCTGGGTTaGGACCGAACTCCAGTGCAT | + |
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Preference number: 4 (lower is better) Translates to: HKALEGSQDPLQMLGPQRNDLLG*DRTPVH Trigger: ATGCACTGGAGTTCGGTCCCAACCCAGGAGATCATT...CCTCTGGGGGCCAAGCATTTGCAGTGGATCTTGGGAACCTTCCAGTGCTTTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027730.6 |
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| CDS-3UTR GCA 90 bp | ACTGGAAGGTTCCCAAGATCCACTGCAAATGCTTGGCCCCCAGAGGCTTTGGAAATGGACGTAAGGGAGTaGAGATTGTGGGCGTCTGTA | + |
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Preference number: 4 (lower is better) Translates to: TGRFPRSTANAWPPEALEMDVRE*RLWASV Trigger: TACAGACGCCCACAATCTGCACTCCCTTACGTCCAT...TTCCAAAGCCTCTGGGGGCCAAGCATTTGCAGTGGATCTTGGGAACCTTCCAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027730.6 |
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| CDS GCA 90 bp | CCTCCTCCGGTCCACCGACACAGACTTCCTCTTACACACCTTACATaGCCACGGCAGGCACTGGCCTGGACAATGCTCAGGGGTCCCCAG | + |
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Preference number: 5 (lower is better) Translates to: PPPVHRHRLPLTHLT*PRQALAWTMLRGPQ Trigger: CTGGGGACCCCTGAGCATTGTCCAGGCCAGTGCCTGCCGTGGGCATGTAAGGTGTGTAAGAGGAAGTCTGTGTCGGTGGACCGGAGGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027730.6 |
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| CDS GCA 90 bp | GTCAGCCGCGAGCAAATGATCTCCTGGGTTGGGACCGAACTCCAGTaGATTGCCCCACTCCGGACTGCAGGAGGCGCTGTGGGAGTTGCA | + |
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Preference number: 5 (lower is better) Translates to: VSREQMISWVGTELQ*IAPLRTAGGAVGVA Trigger: TGCAACTCCCACAGCGCCTCCTGCAGTCCGGAGTGGGGCAATGCACTGGAGTTCGGTCCCAACCCAGGAGATCATTTGCTCGCGGCTGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027730.6 |
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| CDS GCA 90 bp | GGCCTCATTCACTTTCTTGAGCCTGCGCTTCTCCCTCAGTGTGGCTaGCCTCCTCCGGTCCACCGACACAGACTTCCTCTTACACACCTT | + |
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Preference number: 5 (lower is better) Translates to: GLIHFLEPALLPQCG*PPPVHRHRLPLTHL Trigger: AAGGTGTGTAAGAGGAAGTCTGTGTCGGTGGACCGGAGGAGGGCAGCCACACTGAGGGAGAAGCGCAGGCTCAAGAAAGTGAATGAGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027730.6 |
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| CDS-3UTR CAA 90 bp | CCACTGAGGGACATTAACAAGGGGGCTCTCTGGACTCCATCTTTCTCTCCTCAGAGCCGCTGGTTGGGGTaGAGCAGGGTGCTCCTCTTC | + |
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Preference number: 5 (lower is better) Translates to: PLRDINKGALWTPSFSPQSRWLG*SRVLLF Trigger: GAAGAGGAGCACCCTGCTCAACCCCAACCAGCGGCT...CTGAGGAGAGAAAGATGGAGTCCAGAGAGCCCCCTTGTTAATGTCCCTCAGTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027730.6 |
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| CDS-3UTR CAA 90 bp | GCTACAGAAGTGATGGCTTTTGACACCAACTTGGGGGCTCACATGCACACCCAGCCGAACTCCAGTGCATaGCCCCACTCCGGACTGCAG | + |
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Preference number: 5 (lower is better) Translates to: ATEVMAFDTNLGAHMHTQPNSSA*PHSGLQ Trigger: CTGCAGTCCGGAGTGGGGCAATGCACTGGAGTTCGG...CTGGGTGTGCATGTGAGCCCCCAAGTTGGTGTCAAAAGCCATCACTTCTGTAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027730.6 |
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| CDS-3UTR CAA 90 bp | CCAGAGGCTTTGGAACCGGATAGCTCCTCCCCCTTCTCTCTCAACTCAGGGCAGGTAAGGGAGTGCAGATaGTGGGCGTCTGTAGGGTCA | + |
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Preference number: 5 (lower is better) Translates to: PEALEPDSSSPFSLNSGQVRECR*WASVGS Trigger: TGACCCTACAGACGCCCACAATCTGCACTCCCTTAC...CTGCCCTGAGTTGAGAGAGAAGGGGGAGGAGCTATCCGGTTCCAAAGCCTCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027730.6 |
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| CDS-3UTR CAA 90 bp | TACACAAAGCACTGGAAGGTTCCCAAGATCCACTGCAAATGCTTGGCCCCCAGATTAGGCAGCCGCTGGTaGGGGTTGAGCAGGGTGCTC | + |
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Preference number: 5 (lower is better) Translates to: YTKHWKVPKIHCKCLAPRLGSRW*GLSRVL Trigger: GAGCACCCTGCTCAACCCCAACCAGCGGCTGCCTAA...TCTGGGGGCCAAGCATTTGCAGTGGATCTTGGGAACCTTCCAGTGCTTTGTGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027730.6 |
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| CDS-3UTR CAA 90 bp | AACAAGGGGGCTCTCTGGACTCCATCTTTCTCTCCTCAGAAGAGGATGCTCTCTGAGGCGCTGTGGGAGTaGCATTCACTGGGCACCATG | + |
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Preference number: 5 (lower is better) Translates to: NKGALWTPSFSPQKRMLSEALWE*HSLGTM Trigger: CATGGTGCCCAGTGAATGCAACTCCCACAGCGCCTC...AGAGAGCATCCTCTTCTGAGGAGAGAAAGATGGAGTCCAGAGAGCCCCCTTGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027730.6 |
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| CDS-3UTR CAA 90 bp | AACAAGGGGGCTCTCTGGACTCCATCTTTCTCTCCTCAGAAGAGGATGCTCTCTGCCTCATTCACTTTCTaGAGCCTGCGCTTCTCCCTC | + |
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Preference number: 5 (lower is better) Translates to: NKGALWTPSFSPQKRMLSASFTF*SLRFSL Trigger: GAGGGAGAAGCGCAGGCTCAAGAAAGTGAATGAGGC...AGAGAGCATCCTCTTCTGAGGAGAGAAAGATGGAGTCCAGAGAGCCCCCTTGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027730.6 |
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| CDS GCA 72 bp | TGGGACCGAACTCCAGTGCATTGCCCCACTCCGGACTaGAGGAGGCGCTGTGGGAGTTGCATTCACTGGGCA | + |
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Preference number: 6 (lower is better) Translates to: WDRTPVHCPTPD*RRRCGSCIHWA Trigger: TGCCCAGTGAATGCAACTCCCACAGCGCCTCCTGCAGTCCGGAGTGGGGCAATGCACTGGAGTTCGGTCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027730.6 |
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| CDS GCA 72 bp | GAGCAAATGATCTCCTGGGTTGGGACCGAACTCCAGTaGATTGCCCCACTCCGGACTGCAGGAGGCGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: EQMISWVGTELQ*IAPLRTAGGAV Trigger: CACAGCGCCTCCTGCAGTCCGGAGTGGGGCAATGCACTGGAGTTCGGTCCCAACCCAGGAGATCATTTGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027730.6 |
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| CDS GCA 72 bp | TCCACCGTGATGCTGTCCACGATGGACGTAAGGGAGTaGAGATTGTGGGCGTCTGTAGGGTCAGCCGCGAGC | + |
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Preference number: 6 (lower is better) Translates to: STVMLSTMDVRE*RLWASVGSAAS Trigger: GCTCGCGGCTGACCCTACAGACGCCCACAATCTGCACTCCCTTACGTCCATCGTGGACAGCATCACGGTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027730.6 |
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| CDS GCA 72 bp | CACTTTCTTGAGCCTGCGCTTCTCCCTCAGTGTGGCTaGCCTCCTCCGGTCCACCGACACAGACTTCCTCTT | + |
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Preference number: 6 (lower is better) Translates to: HFLEPALLPQCG*PPPVHRHRLPL Trigger: AAGAGGAAGTCTGTGTCGGTGGACCGGAGGAGGGCAGCCACACTGAGGGAGAAGCGCAGGCTCAAGAAAGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027730.6 |
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| CDS GCA 72 bp | GTCCACCGACACAGACTTCCTCTTACACACCTTACATaGCCACGGCAGGCACTGGCCTGGACAATGCTCAGG | + |
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Preference number: 6 (lower is better) Translates to: VHRHRLPLTHLT*PRQALAWTMLR Trigger: CCTGAGCATTGTCCAGGCCAGTGCCTGCCGTGGGCATGTAAGGTGTGTAAGAGGAAGTCTGTGTCGGTGGAC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027730.6 |
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| CDS CCA 72 bp | TTCCTCTTACACACCTTACATGCCCACGGCAGGCACTaGCCTGGACAATGCTCAGGGGTCCCCAGTCCCTTT | + |
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Preference number: 6 (lower is better) Translates to: FLLHTLHAHGRH*PGQCSGVPSPF Trigger: AAAGGGACTGGGGACCCCTGAGCATTGTCCAGGCCAGTGCCTGCCGTGGGCATGTAAGGTGTGTAAGAGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027730.6 |
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