Pregenerated sensors for MYOD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000009471Ensembl transcript IDs: ENSMUST00000072514.3
Found 71 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGAAAGGAAGAGCGCCTGGCCACTCAAGGATCAGCTCTGGCCCAGTaGGGTGCAGCCAGAGTGCAAGTGGCCTTCGCTGTGAGCCGCATG | + |
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Preference number: 1 (lower is better) Translates to: GKEERLATQGSALAQ*GAARVQVAFAVSRM Trigger: CATGCGGCTCACAGCGAAGGCCACTTGCACTCTGGCTGCACCTCACTGGGCCAGAGCTGATCCTTGAGTGGCCAGGCGCTCTTCCTTTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072514.3 |
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| 3UTR TCA 90 bp | ATGTGGAGGGCAGGGCTTAGGTGTGCAAGGCTCACCCCTGTGCTATaGGGAAAGGAAGAGCGCCTGGCCACTCAAGGATCAGCTCTGGCC | + |
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Preference number: 1 (lower is better) Translates to: MWRAGLRCARLTPVL*GKEERLATQGSALA Trigger: GGCCAGAGCTGATCCTTGAGTGGCCAGGCGCTCTTCCTTTCCTCATAGCACAGGGGTGAGCCTTGCACACCTAAGCCCTGCCCTCCACAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072514.3 |
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| 3UTR GCA 90 bp | GGAAGAGCGCCTGGCCACTCAAGGATCAGCTCTGGCCCAGTGAGGTaGAGCCAGAGTGCAAGTGGCCTTCGCTGTGAGCCGCATGAAAAA | + |
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Preference number: 1 (lower is better) Translates to: GRAPGHSRISSGPVR*SQSASGLRCEPHEK Trigger: TTTTTCATGCGGCTCACAGCGAAGGCCACTTGCACTCTGGCTGCACCTCACTGGGCCAGAGCTGATCCTTGAGTGGCCAGGCGCTCTTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072514.3 |
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| 3UTR GCA 90 bp | AAAGGATGTGGAGGGCAGGGCTTAGGTGTGCAAGGCTCACCCCTGTaGTATGAGGAAAGGAAGAGCGCCTGGCCACTCAAGGATCAGCTC | + |
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Preference number: 1 (lower is better) Translates to: KGCGGQGLGVQGSPL*YEERKSAWPLKDQL Trigger: GAGCTGATCCTTGAGTGGCCAGGCGCTCTTCCTTTCCTCATAGCACAGGGGTGAGCCTTGCACACCTAAGCCCTGCCCTCCACATCCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072514.3 |
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| 3UTR TCA 90 bp | AAGGACAGTTGGGAAGAGTGTCATTTAAGCTTCATCTTTTGGGCGTaGAGAACCAGGGACACCATCCCCAGGAGTGCCTACGGTGGTGCG | + |
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Preference number: 1 (lower is better) Translates to: KDSWEECHLSFIFWA*RTRDTIPRSAYGGA Trigger: CGCACCACCGTAGGCACTCCTGGGGATGGTGTCCCTGGTTCTTCACGCCCAAAAGATGAAGCTTAAATGACACTCTTCCCAACTGTCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072514.3 |
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| 3UTR GCA 90 bp | AAAGGACTATGTCCTTTCTTTGGGGCTGGATCTAGGACAGACTTCTaGTCTTCCCTTCCCTCTGGAAGAACGGCTTCGAAAGGACAGTTG | + |
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Preference number: 1 (lower is better) Translates to: KGLCPFFGAGSRTDF*SSLPSGRTASKGQL Trigger: CAACTGTCCTTTCGAAGCCGTTCTTCCAGAGGGAAGGGAAGAGCAGAAGTCTGTCCTAGATCCAGCCCCAAAGAAAGGACATAGTCCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072514.3 |
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| 3UTR-3UTR GCA 90 bp | TGTCCTTTCTTTGGGGCTGGATCTAGGACAGACTTCTGCTCTTCCCTTCCCTCTGAGTGCCTACGGTGGTaGGCCCTCTGCTGCTGCAGT | + |
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Preference number: 2 (lower is better) Translates to: CPFFGAGSRTDFCSSLPSECLRW*ALCCCS Trigger: ACTGCAGCAGCAGAGGGCGCACCACCGTAGGCACTC...AGAGGGAAGGGAAGAGCAGAAGTCTGTCCTAGATCCAGCCCCAAAGAAAGGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072514.3 |
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| 3UTR-3UTR CCA 90 bp | GGCTCCCGCTCTGGCCAAGCAACTCTTATTTACACGAATAGATTACAAAAGTCTCTCAAGGATCAGCTCTaGCCCAGTGAGGTGCAGCCA | + |
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Preference number: 2 (lower is better) Translates to: GSRSGQATLIYTNRLQKSLKDQL*PSEVQP Trigger: TGGCTGCACCTCACTGGGCCAGAGCTGATCCTTGAG...AGACTTTTGTAATCTATTCGTGTAAATAAGAGTTGCTTGGCCAGAGCGGGAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072514.3 |
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| 3UTR CAA 90 bp | TTCTGCTCTTCCCTTCCCTCTGGAAGAACGGCTTCGAAAGGACAGTaGGGAAGAGTGTCATTTAAGCTTCATCTTTTGGGCGTGAAGAAC | + |
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Preference number: 2 (lower is better) Translates to: FCSSLPSGRTASKGQ*GRVSFKLHLLGVKN Trigger: GTTCTTCACGCCCAAAAGATGAAGCTTAAATGACACTCTTCCCAACTGTCCTTTCGAAGCCGTTCTTCCAGAGGGAAGGGAAGAGCAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072514.3 |
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| 3UTR-3UTR CCA 90 bp | TGTCCTTTCTTTGGGGCTGGATCTAGGACAGACTTCTGCTCTTCCCTTCCCTCTCTTCGAAAGGACAGTTaGGAAGAGTGTCATTTAAGC | + |
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Preference number: 2 (lower is better) Translates to: CPFFGAGSRTDFCSSLPSLRKDS*EECHLS Trigger: GCTTAAATGACACTCTTCCCAACTGTCCTTTCGAAG...AGAGGGAAGGGAAGAGCAGAAGTCTGTCCTAGATCCAGCCCCAAAGAAAGGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072514.3 |
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| 3UTR CAA 90 bp | CTGAAGGACTACAACAACAACAACAAAAAGGACTATGTCCTTTCTTaGGGGCTGGATCTAGGACAGACTTCTGCTCTTCCCTTCCCTCTG | + |
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Preference number: 2 (lower is better) Translates to: LKDYNNNNKKDYVLS*GLDLGQTSALPFPL Trigger: CAGAGGGAAGGGAAGAGCAGAAGTCTGTCCTAGATCCAGCCCCAAAGAAAGGACATAGTCCTTTTTGTTGTTGTTGTTGTAGTCCTTCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072514.3 |
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| 3UTR GCA 72 bp | TTGGGCGTGAAGAACCAGGGACACCATCCCCAGGAGTaGCTACGGTGGTGCGCCCTCTGCTGCTGCAGTCGA | + |
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Preference number: 3 (lower is better) Translates to: LGVKNQGHHPQE*LRWCALCCCSR Trigger: TCGACTGCAGCAGCAGAGGGCGCACCACCGTAGGCACTCCTGGGGATGGTGTCCCTGGTTCTTCACGCCCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072514.3 |
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| 3UTR GCA 72 bp | GGAGGGCAGGGCTTAGGTGTGCAAGGCTCACCCCTGTaGTATGAGGAAAGGAAGAGCGCCTGGCCACTCAAG | + |
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Preference number: 3 (lower is better) Translates to: GGQGLGVQGSPL*YEERKSAWPLK Trigger: CTTGAGTGGCCAGGCGCTCTTCCTTTCCTCATAGCACAGGGGTGAGCCTTGCACACCTAAGCCCTGCCCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072514.3 |
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| 3UTR CCA 72 bp | GAAAGGAAGAGCGCCTGGCCACTCAAGGATCAGCTCTaGCCCAGTGAGGTGCAGCCAGAGTGCAAGTGGCCT | + |
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Preference number: 3 (lower is better) Translates to: ERKSAWPLKDQL*PSEVQPECKWP Trigger: AGGCCACTTGCACTCTGGCTGCACCTCACTGGGCCAGAGCTGATCCTTGAGTGGCCAGGCGCTCTTCCTTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072514.3 |
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| 3UTR CCA 72 bp | GTGGTCCTGAACCGCGGGAAGGGGGAGAGTGGGGTATaGTTACACCTGTTACACCTGAGACCTGAGTGGCCT | + |
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Preference number: 3 (lower is better) Translates to: VVLNRGKGESGV*LHLLHLRPEWP Trigger: AGGCCACTCAGGTCTCAGGTGTAACAGGTGTAACCATACCCCACTCTCCCCCTTCCCGCGGTTCAGGACCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072514.3 |
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| 3UTR TCA 72 bp | GCAGGGCTTAGGTGTGCAAGGCTCACCCCTGTGCTATaGGGAAAGGAAGAGCGCCTGGCCACTCAAGGATCA | + |
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Preference number: 3 (lower is better) Translates to: AGLRCARLTPVL*GKEERLATQGS Trigger: TGATCCTTGAGTGGCCAGGCGCTCTTCCTTTCCTCATAGCACAGGGGTGAGCCTTGCACACCTAAGCCCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072514.3 |
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| CDS-3UTR CCA 90 bp | AGGAAAGGAAGAGCGCCTGGCCACTCAAGGATCAGCTCTGGCCCAGTGAGGTGCAAGCAGCGACCCGCCTaGTGGTGCCCGCTGGGCGCG | + |
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Preference number: 4 (lower is better) Translates to: RKGRAPGHSRISSGPVRCKQRPA*WCPLGA Trigger: CGCGCCCAGCGGGCACCACCAGGCGGGTCGCTGCTT...GCACCTCACTGGGCCAGAGCTGATCCTTGAGTGGCCAGGCGCTCTTCCTTTCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072514.3 |
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| CDS-3UTR CCA 90 bp | GGGCAGGGCTTAGGTGTGCAAGGCTCACCCCTGTGCTATGAGGAAAGGAAGAGCCCGCCGGGGGCCGCTTaGGGGGCCGCTGTAATCCAT | + |
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Preference number: 4 (lower is better) Translates to: GQGLGVQGSPLCYEERKSPPGAA*GAAVIH Trigger: ATGGATTACAGCGGCCCCCCAAGCGGCCCCCGGCGG...GCTCTTCCTTTCCTCATAGCACAGGGGTGAGCCTTGCACACCTAAGCCCTGCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000072514.3 |
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| CDS-3UTR GCA 90 bp | GGGCAGGGCTTAGGTGTGCAAGGCTCACCCCTGTGCTATGAGGAAAGGAAGAGCGCATGGTGGCGGCCTTaGGGCGATCAGCGTTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: GQGLGVQGSPLCYEERKSAWWRP*GDQRWW Trigger: CCACCAACGCTGATCGCCGCAAGGCCGCCACCATGC...GCTCTTCCTTTCCTCATAGCACAGGGGTGAGCCTTGCACACCTAAGCCCTGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072514.3 |
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| CDS-3UTR CCA 90 bp | CAAGGCTCACCCCTGTGCTATGAGGAAAGGAAGAGCGCCTGGCCACTCAAGGATCCTGGTGGTGCCCGCTaGGCGCGCGCACATGCTCAT | + |
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Preference number: 4 (lower is better) Translates to: QGSPLCYEERKSAWPLKDPGGAR*ARAHAH Trigger: ATGAGCATGTGCGCGCGCCCAGCGGGCACCACCAGG...ATCCTTGAGTGGCCAGGCGCTCTTCCTTTCCTCATAGCACAGGGGTGAGCCTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072514.3 |
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| CDS-3UTR GCA 90 bp | GAGAGTGGGGTATGGTTACACCTGTTACACCTGAGACCTGAGTGGCCTCCGCAAAGGAGGGCTCCCATGTaGACCAGGCGCGGGTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: ESGVWLHLLHLRPEWPPQRRAPM*TRRGSR Trigger: CCTGGACCCGCGCCTGGTGCACATGGGAGCCCTCCT...TTGCGGAGGCCACTCAGGTCTCAGGTGTAACAGGTGTAACCATACCCCACTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072514.3 |
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| CDS-3UTR CCA 90 bp | AGGAAAGGAAGAGCGCCTGGCCACTCAAGGATCAGCTCTGGCCCAGTGAGGTGCTGCGCTCCACTATGCTaGACAGGCAGTCGAGGCTCG | + |
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Preference number: 4 (lower is better) Translates to: RKGRAPGHSRISSGPVRCCAPLC*TGSRGS Trigger: CGAGCCTCGACTGCCTGTCCAGCATAGTGGAGCGCA...GCACCTCACTGGGCCAGAGCTGATCCTTGAGTGGCCAGGCGCTCTTCCTTTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072514.3 |
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| CDS-3UTR CCA 90 bp | AGTGGCCTCCGCAAGCTGTGGGGAAAAGTGGGTGCCAGGAGGGCTCCAGAAAGTCAGCGGGGCTGTCTGTaGAGATGCGCTCCACTATGC | + |
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Preference number: 4 (lower is better) Translates to: SGLRKLWGKVGARRAPESQRGCL*RCAPLC Trigger: GCATAGTGGAGCGCATCTCCACAGACAGCCCCGCTG...ACTTTCTGGAGCCCTCCTGGCACCCACTTTTCCCCACAGCTTGCGGAGGCCACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000072514.3 |
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| CDS-3UTR GCA 90 bp | ATCAGCTCTGGCCCAGTGAGGTGCAGCCAGAGTGCAAGTGGCCTTCGCTGTGAGAGGCGACTCTGGTGGTaGATCTGCCAAAAGCAGCGC | + |
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Preference number: 4 (lower is better) Translates to: ISSGPVRCSQSASGLRCERRLWW*ICQKQR Trigger: GCGCTGCTTTTGGCAGATGCACCACCAGAGTCGCCT...CTCACAGCGAAGGCCACTTGCACTCTGGCTGCACCTCACTGGGCCAGAGCTGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072514.3 |
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| CDS-3UTR CCA 90 bp | ATGAGGAAAGGAAGAGCGCCTGGCCACTCAAGGATCAGCTCTGGCCCAGTGAGGGGCGATCAGCGTTGGTaGTCTTGCGCTTGCACGCCT | + |
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Preference number: 4 (lower is better) Translates to: MRKGRAPGHSRISSGPVRGDQRW*SCACTP Trigger: AGGCGTGCAAGCGCAAGACCACCAACGCTGATCGCC...CCTCACTGGGCCAGAGCTGATCCTTGAGTGGCCAGGCGCTCTTCCTTTCCTCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072514.3 |
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| CDS-3UTR TCA 90 bp | AGGAAAGGAAGAGCGCCTGGCCACTCAAGGATCAGCTCTGGCCCAGTGAGGTGCAAAGCGCAGGTCTGGTaGGTCGAAACACGGGTCATC | + |
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Preference number: 4 (lower is better) Translates to: RKGRAPGHSRISSGPVRCKAQVW*VETRVI Trigger: GATGACCCGTGTTTCGACTCACCAGACCTGCGCTTT...GCACCTCACTGGGCCAGAGCTGATCCTTGAGTGGCCAGGCGCTCTTCCTTTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072514.3 |
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| CDS-3UTR GCA 90 bp | CAGACTTCTGCTCTTCCCTTCCCTCTGGAAGAACGGCTTCGAAAGGACAGTTGGCTGGGCGCGCGCACATaGTCATCCTCACGAGCGCCT | + |
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Preference number: 4 (lower is better) Translates to: QTSALPFPLEERLRKDSWLGART*SSSRAP Trigger: AGGCGCTCGTGAGGATGAGCATGTGCGCGCGCCCAG...CCAACTGTCCTTTCGAAGCCGTTCTTCCAGAGGGAAGGGAAGAGCAGAAGTCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072514.3 |
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| CDS-3UTR CCA 90 bp | CAAGGCTCACCCCTGTGCTATGAGGAAAGGAAGAGCGCCTGGCCACTCAAGGATAGTTGGAGCGCGGGCTaGATGCATCTGAGTCGCCAC | + |
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Preference number: 4 (lower is better) Translates to: QGSPLCYEERKSAWPLKDSWSAG*MHLSRH Trigger: GTGGCGACTCAGATGCATCCAGCCCGCGCTCCAACT...ATCCTTGAGTGGCCAGGCGCTCTTCCTTTCCTCATAGCACAGGGGTGAGCCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072514.3 |
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| CDS-3UTR GCA 90 bp | GGACAGACTTCTGCTCTTCCCTTCCCTCTGGAAGAACGGCTTCGAAAGGACAGTTGCGCTTGCACGCCTTaGAGGCCCACAGCAAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: GQTSALPFPLEERLRKDSCACTP*RPTASS Trigger: GCTGCTTGCTGTGGGCCTGCAAGGCGTGCAAGCGCA...ACTGTCCTTTCGAAGCCGTTCTTCCAGAGGGAAGGGAAGAGCAGAAGTCTGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072514.3 |
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| CDS-3UTR TCA 90 bp | TGTCCTTTCTTTGGGGCTGGATCTAGGACAGACTTCTGCTCTTCCCTTCCCTCTCGGGCTGGATGCATCTaGGTCGCCACTGTAGTGCTC | + |
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Preference number: 4 (lower is better) Translates to: CPFFGAGSRTDFCSSLPSRAGCI*VATVVL Trigger: GAGCACTACAGTGGCGACTCAGATGCATCCAGCCCG...AGAGGGAAGGGAAGAGCAGAAGTCTGTCCTAGATCCAGCCCCAAAGAAAGGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072514.3 |
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| CDS-3UTR TCA 90 bp | TATAAATTAGCGTCTTTATTTCCAACACCTGAGCGAGCGAGCCTCGAGGCTCGCTGGACGTGCAGCGCTTaGGCGTCTCGAAGGCCTCAT | + |
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Preference number: 4 (lower is better) Translates to: YKLASLFPTPERASLEARWTCSA*ASRRPH Trigger: ATGAGGCCTTCGAGACGCTCAAGCGCTGCACGTCCA...GCGAGCCTCGAGGCTCGCTCGCTCAGGTGTTGGAAATAAAGACGCTAATTTATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072514.3 |
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| CDS-3UTR GCA 90 bp | ATCAGCTCTGGCCCAGTGAGGTGCAGCCAGAGTGCAAGTGGCCTTCGCTGTGAGATCATAGAAGTCGTCTaGTGTCTCAAAGGAGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: ISSGPVRCSQSASGLRCEIIEVV*CLKGAE Trigger: CTCTGCTCCTTTGAGACAGCAGACGACTTCTATGAT...CTCACAGCGAAGGCCACTTGCACTCTGGCTGCACCTCACTGGGCCAGAGCTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072514.3 |
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| CDS-3UTR GCA 90 bp | TATAAATTAGCGTCTTTATTTCCAACACCTGAGCGAGCGAGCCTCGAGGCTCGCCAGCGTTGGTGGTCTTaGGCTTGCACGCCTTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: YKLASLFPTPERASLEARQRWWS*ACTPCR Trigger: CCTGCAAGGCGTGCAAGCGCAAGACCACCAACGCTG...GCGAGCCTCGAGGCTCGCTCGCTCAGGTGTTGGAAATAAAGACGCTAATTTATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072514.3 |
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| CDS-3UTR GCA 90 bp | GGAAAAGTGGGTGCCAGGAGGGCTCCAGAAAGTGACAAACAAAAGGATGTGGAGAGATGCGCTCCACTATaGTGGACAGGCAGTCGAGGC | + |
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Preference number: 4 (lower is better) Translates to: GKVGARRAPESDKQKDVERCAPL*WTGSRG Trigger: GCCTCGACTGCCTGTCCAGCATAGTGGAGCGCATCT...CTCCACATCCTTTTGTTTGTCACTTTCTGGAGCCCTCCTGGCACCCACTTTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072514.3 |
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| CDS-3UTR GCA 90 bp | GGCTCCCGCTCTGGCCAAGCAACTCTTATTTACACGAATAGATTACAAAAGTCTTGGTGGTCTTGCGCTTaGACGCCTTGCAGGCCCACA | + |
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Preference number: 4 (lower is better) Translates to: GSRSGQATLIYTNRLQKSWWSCA*TPCRPT Trigger: TGTGGGCCTGCAAGGCGTGCAAGCGCAAGACCACCA...AGACTTTTGTAATCTATTCGTGTAAATAAGAGTTGCTTGGCCAGAGCGGGAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072514.3 |
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| CDS-3UTR CCA 90 bp | GGCTCCCGCTCTGGCCAAGCAACTCTTATTTACACGAATAGATTACAAAAGTCTTGCGGCGATCAGCGTTaGTGGTCTTGCGCTTGCACG | + |
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Preference number: 4 (lower is better) Translates to: GSRSGQATLIYTNRLQKSCGDQR*WSCACT Trigger: CGTGCAAGCGCAAGACCACCAACGCTGATCGCCGCA...AGACTTTTGTAATCTATTCGTGTAAATAAGAGTTGCTTGGCCAGAGCGGGAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072514.3 |
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| 3UTR CAA 72 bp | CAACACCTGAGCGAGCGAGCCTCGAGGCTCGCCCGCTaGAGGAATAAACATACAAAGTTTTTGTTGCACTAC | + |
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Preference number: 4 (lower is better) Translates to: QHLSERASRLAR*RNKHTKFLLHY Trigger: GTAGTGCAACAAAAACTTTGTATGTTTATTCCTCAAGCGGGCGAGCCTCGAGGCTCGCTCGCTCAGGTGTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072514.3 |
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| 3UTR CAA 72 bp | TCCCTTCCCTCTGGAAGAACGGCTTCGAAAGGACAGTaGGGAAGAGTGTCATTTAAGCTTCATCTTTTGGGC | + |
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Preference number: 4 (lower is better) Translates to: SLPSGRTASKGQ*GRVSFKLHLLG Trigger: GCCCAAAAGATGAAGCTTAAATGACACTCTTCCCAACTGTCCTTTCGAAGCCGTTCTTCCAGAGGGAAGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072514.3 |
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| CDS CCA 90 bp | GTGGTGCCCGCTGGGCGCGCGCACATGCTCATCCTCACGAGCGCCTaGGCCTGGGTGCACCGCAGTAGGGAAGTGTGCGTGCTCCTCCGG | + |
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Preference number: 5 (lower is better) Translates to: VVPAGRAHMLILTSA*AWVHRSREVCVLLR Trigger: CCGGAGGAGCACGCACACTTCCCTACTGCGGTGCACCCAGGCCCAGGCGCTCGTGAGGATGAGCATGTGCGCGCGCCCAGCGGGCACCAC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072514.3 |
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| CDS GCA 90 bp | TCACGAGCGCCTGGGCCTGGGTGCACCGCAGTAGGGAAGTGTGCGTaGTCCTCCGGTTTCAGGAGGGCTCCCATGTGCACCAGGCGCGGG | + |
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Preference number: 5 (lower is better) Translates to: SRAPGPGCTAVGKCA*SSGFRRAPMCTRRG Trigger: CCCGCGCCTGGTGCACATGGGAGCCCTCCTGAAACCGGAGGAGCACGCACACTTCCCTACTGCGGTGCACCCAGGCCCAGGCGCTCGTGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072514.3 |
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| CDS GCA 90 bp | TGGAGCGCGGGCTGGATGCATCTGAGTCGCCACTGTAGTGCTCGCTaGCACGGCCTGGGGGCAGCGGTCCAGGTGCGTAGAAGGCAGCGG | + |
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Preference number: 5 (lower is better) Translates to: WSAGWMHLSRHCSAR*HGLGAAVQVRRRQR Trigger: CCGCTGCCTTCTACGCACCTGGACCGCTGCCCCCAGGCCGTGGCAGCGAGCACTACAGTGGCGACTCAGATGCATCCAGCCCGCGCTCCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072514.3 |
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| CDS CCA 90 bp | CCCGCTGGGCGCGCGCACATGCTCATCCTCACGAGCGCCTGGGCCTaGGTGCACCGCAGTAGGGAAGTGTGCGTGCTCCTCCGGTTTCAG | + |
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Preference number: 5 (lower is better) Translates to: PAGRAHMLILTSAWA*VHRSREVCVLLRFQ Trigger: CTGAAACCGGAGGAGCACGCACACTTCCCTACTGCGGTGCACCCAGGCCCAGGCGCTCGTGAGGATGAGCATGTGCGCGCGCCCAGCGGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072514.3 |
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| CDS GCA 90 bp | CTGGGCGCGCGCACATGCTCATCCTCACGAGCGCCTGGGCCTGGGTaGACCGCAGTAGGGAAGTGTGCGTGCTCCTCCGGTTTCAGGAGG | + |
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Preference number: 5 (lower is better) Translates to: LGARTCSSSRAPGPG*TAVGKCACSSGFRR Trigger: CCTCCTGAAACCGGAGGAGCACGCACACTTCCCTACTGCGGTGCACCCAGGCCCAGGCGCTCGTGAGGATGAGCATGTGCGCGCGCCCAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072514.3 |
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| CDS CCA 90 bp | GCGCAGGCGCAGCGGGGCTGTCTGTGGAGATGCGCTCCACTATGCTaGACAGGCAGTCGAGGCTCGACACAGCCGCACTCTTCCCTGGCC | + |
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Preference number: 5 (lower is better) Translates to: AQAQRGCLWRCAPLC*TGSRGSTQPHSSLA Trigger: GGCCAGGGAAGAGTGCGGCTGTGTCGAGCCTCGACTGCCTGTCCAGCATAGTGGAGCGCATCTCCACAGACAGCCCCGCTGCGCCTGCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072514.3 |
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| CDS GCA 90 bp | ATCCTCACGAGCGCCTGGGCCTGGGTGCACCGCAGTAGGGAAGTGTaGGTGCTCCTCCGGTTTCAGGAGGGCTCCCATGTGCACCAGGCG | + |
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Preference number: 5 (lower is better) Translates to: ILTSAWAWVHRSREV*VLLRFQEGSHVHQA Trigger: CGCCTGGTGCACATGGGAGCCCTCCTGAAACCGGAGGAGCACGCACACTTCCCTACTGCGGTGCACCCAGGCCCAGGCGCTCGTGAGGAT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072514.3 |
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| CDS GCA 90 bp | GCAGCGCAGGCGCAGCGGGGCTGTCTGTGGAGATGCGCTCCACTATaGTGGACAGGCAGTCGAGGCTCGACACAGCCGCACTCTTCCCTG | + |
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Preference number: 5 (lower is better) Translates to: AAQAQRGCLWRCAPL*WTGSRGSTQPHSSL Trigger: CAGGGAAGAGTGCGGCTGTGTCGAGCCTCGACTGCCTGTCCAGCATAGTGGAGCGCATCTCCACAGACAGCCCCGCTGCGCCTGCGCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072514.3 |
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| CDS CCA 90 bp | TGGACAGGCAGTCGAGGCTCGACACAGCCGCACTCTTCCCTGGCCTaGACTCGCGCGCCGCCTCACTGTAGTAGGCGGTGTCGTAGCCAT | + |
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Preference number: 5 (lower is better) Translates to: WTGSRGSTQPHSSLA*TRAPPHCSRRCRSH Trigger: ATGGCTACGACACCGCCTACTACAGTGAGGCGGCGCGCGAGTCCAGGCCAGGGAAGAGTGCGGCTGTGTCGAGCCTCGACTGCCTGTCCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072514.3 |
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| CDS GCA 90 bp | CATCTGCCAAAAGCAGCGCAGGCGCAGCGGGGCTGTCTGTGGAGATaGGCTCCACTATGCTGGACAGGCAGTCGAGGCTCGACACAGCCG | + |
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Preference number: 5 (lower is better) Translates to: HLPKAAQAQRGCLWR*APLCWTGSRGSTQP Trigger: CGGCTGTGTCGAGCCTCGACTGCCTGTCCAGCATAGTGGAGCGCATCTCCACAGACAGCCCCGCTGCGCCTGCGCTGCTTTTGGCAGATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072514.3 |
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| CDS CCA 90 bp | TATGCTGGACAGGCAGTCGAGGCTCGACACAGCCGCACTCTTCCCTaGCCTGGACTCGCGCGCCGCCTCACTGTAGTAGGCGGTGTCGTA | + |
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Preference number: 5 (lower is better) Translates to: YAGQAVEARHSRTLP*PGLARRLTVVGGVV Trigger: TACGACACCGCCTACTACAGTGAGGCGGCGCGCGAGTCCAGGCCAGGGAAGAGTGCGGCTGTGTCGAGCCTCGACTGCCTGTCCAGCATA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072514.3 |
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| CDS CCA 90 bp | ACTGTAGTAGGCGGTGTCGTAGCCATTCTGCCGCCGGGGGCCGCTTaGGGGGCCGCTGTAATCCATCATGCCATCAGAGCAGTTGGAGCG | + |
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Preference number: 5 (lower is better) Translates to: TVVGGVVAILPPGAA*GAAVIHHAIRAVGA Trigger: CGCTCCAACTGCTCTGATGGCATGATGGATTACAGCGGCCCCCCAAGCGGCCCCCGGCGGCAGAATGGCTACGACACCGCCTACTACAGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000072514.3 |
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| CDS CCA 90 bp | GTGGTGCATCTGCCAAAAGCAGCGCAGGCGCAGCGGGGCTGTCTGTaGAGATGCGCTCCACTATGCTGGACAGGCAGTCGAGGCTCGACA | + |
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Preference number: 5 (lower is better) Translates to: VVHLPKAAQAQRGCL*RCAPLCWTGSRGST Trigger: TGTCGAGCCTCGACTGCCTGTCCAGCATAGTGGAGCGCATCTCCACAGACAGCCCCGCTGCGCCTGCGCTGCTTTTGGCAGATGCACCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072514.3 |
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| CDS-3UTR CAA 90 bp | GGGCAGGGCTTAGGTGTGCAAGGCTCACCCCTGTGCTATGAGGAAAGGAAGAGCAGCCGCTGGTTCGGGTaGCTGGACGTGCAGCGCTTG | + |
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Preference number: 5 (lower is better) Translates to: GQGLGVQGSPLCYEERKSSRWFG*LDVQRL Trigger: CAAGCGCTGCACGTCCAGCAACCCGAACCAGCGGCT...GCTCTTCCTTTCCTCATAGCACAGGGGTGAGCCTTGCACACCTAAGCCCTGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072514.3 |
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| CDS-3UTR CAA 90 bp | AGGACAGACTTCTGCTCTTCCCTTCCCTCTGGAAGAACGGCTTCGAAAGGACAGTTGCGCTTGCACGCCTaGCAGGCCCACAGCAAGCAG | + |
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Preference number: 5 (lower is better) Translates to: RTDFCSSLPSGRTASKGQLRLHA*QAHSKQ Trigger: CTGCTTGCTGTGGGCCTGCAAGGCGTGCAAGCGCAA...CTGTCCTTTCGAAGCCGTTCTTCCAGAGGGAAGGGAAGAGCAGAAGTCTGTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072514.3 |
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| CDS-3UTR CAA 90 bp | TCATTTAAGCTTCATCTTTTGGGCGTGAAGAACCAGGGACACCATCCCCAGGAGCGCATGGTGGCGGCCTaGCGGCGATCAGCGTTGGTG | + |
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Preference number: 5 (lower is better) Translates to: SFKLHLLGVKNQGHHPQERMVAA*RRSALV Trigger: CACCAACGCTGATCGCCGCAAGGCCGCCACCATGCG...CTCCTGGGGATGGTGTCCCTGGTTCTTCACGCCCAAAAGATGAAGCTTAAATGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072514.3 |
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| CDS-3UTR CAA 90 bp | GGAAAAGTGGGTGCCAGGAGGGCTCCAGAAAGTGACAAACAAAAGGATGTGGAGAAGGCCTCATTCACTTaGCTCAGGCGGCGGCGCTCG | + |
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Preference number: 5 (lower is better) Translates to: GKVGARRAPESDKQKDVEKASFT*LRRRRS Trigger: CGAGCGCCGCCGCCTGAGCAAAGTGAATGAGGCCTT...CTCCACATCCTTTTGTTTGTCACTTTCTGGAGCCCTCCTGGCACCCACTTTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072514.3 |
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| CDS-3UTR CAA 90 bp | GGAAAAGTGGGTGCCAGGAGGGCTCCAGAAAGTGACAAACAAAAGGATGTGGAGTCAGCGTTGGTGGTCTaGCGCTTGCACGCCTTGCAG | + |
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Preference number: 5 (lower is better) Translates to: GKVGARRAPESDKQKDVESALVV*RLHALQ Trigger: CTGCAAGGCGTGCAAGCGCAAGACCACCAACGCTGA...CTCCACATCCTTTTGTTTGTCACTTTCTGGAGCCCTCCTGGCACCCACTTTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072514.3 |
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| CDS-3UTR CAA 90 bp | GGAAAAGTGGGTGCCAGGAGGGCTCCAGAAAGTGACAAACAAAAGGATGTGGAGTTGCGGCGATCAGCGTaGGTGGTCTTGCGCTTGCAC | + |
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Preference number: 5 (lower is better) Translates to: GKVGARRAPESDKQKDVELRRSA*VVLRLH Trigger: GTGCAAGCGCAAGACCACCAACGCTGATCGCCGCAA...CTCCACATCCTTTTGTTTGTCACTTTCTGGAGCCCTCCTGGCACCCACTTTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072514.3 |
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| CDS-3UTR CAA 90 bp | TATAAATTAGCGTCTTTATTTCCAACACCTGAGCGAGCGAGCCTCGAGGCTCGCCTGGACGTGCAGCGCTaGAGCGTCTCGAAGGCCTCA | + |
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Preference number: 5 (lower is better) Translates to: YKLASLFPTPERASLEARLDVQR*SVSKAS Trigger: TGAGGCCTTCGAGACGCTCAAGCGCTGCACGTCCAG...GCGAGCCTCGAGGCTCGCTCGCTCAGGTGTTGGAAATAAAGACGCTAATTTATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072514.3 |
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| CDS CCA 72 bp | GGATGCCCCCTCTGGCGGACCCGGAGGCGACTCTGGTaGTGCATCTGCCAAAAGCAGCGCAGGCGCAGCGGG | + |
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Preference number: 6 (lower is better) Translates to: GCPLWRTRRRLW*CICQKQRRRSG Trigger: CCCGCTGCGCCTGCGCTGCTTTTGGCAGATGCACCACCAGAGTCGCCTCCGGGTCCGCCAGAGGGGGCATCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072514.3 |
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| CDS CCA 72 bp | GCTGGGCGCGCGCACATGCTCATCCTCACGAGCGCCTaGGCCTGGGTGCACCGCAGTAGGGAAGTGTGCGTG | + |
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Preference number: 6 (lower is better) Translates to: AGRAHMLILTSA*AWVHRSREVCV Trigger: CACGCACACTTCCCTACTGCGGTGCACCCAGGCCCAGGCGCTCGTGAGGATGAGCATGTGCGCGCGCCCAGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072514.3 |
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| CDS CCA 72 bp | CGCGCGCACATGCTCATCCTCACGAGCGCCTGGGCCTaGGTGCACCGCAGTAGGGAAGTGTGCGTGCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: RAHMLILTSAWA*VHRSREVCVLL Trigger: GAGGAGCACGCACACTTCCCTACTGCGGTGCACCCAGGCCCAGGCGCTCGTGAGGATGAGCATGTGCGCGCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072514.3 |
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| CDS CCA 72 bp | CAGGCAGTCGAGGCTCGACACAGCCGCACTCTTCCCTaGCCTGGACTCGCGCGCCGCCTCACTGTAGTAGGC | + |
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Preference number: 6 (lower is better) Translates to: QAVEARHSRTLP*PGLARRLTVVG Trigger: GCCTACTACAGTGAGGCGGCGCGCGAGTCCAGGCCAGGGAAGAGTGCGGCTGTGTCGAGCCTCGACTGCCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072514.3 |
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| CDS GCA 72 bp | CCTGGGCCTGGGTGCACCGCAGTAGGGAAGTGTGCGTaGTCCTCCGGTTTCAGGAGGGCTCCCATGTGCACC | + |
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Preference number: 6 (lower is better) Translates to: PGPGCTAVGKCA*SSGFRRAPMCT Trigger: GGTGCACATGGGAGCCCTCCTGAAACCGGAGGAGCACGCACACTTCCCTACTGCGGTGCACCCAGGCCCAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072514.3 |
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| CDS GCA 72 bp | AGCGCCTGGGCCTGGGTGCACCGCAGTAGGGAAGTGTaGGTGCTCCTCCGGTTTCAGGAGGGCTCCCATGTG | + |
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Preference number: 6 (lower is better) Translates to: SAWAWVHRSREV*VLLRFQEGSHV Trigger: CACATGGGAGCCCTCCTGAAACCGGAGGAGCACGCACACTTCCCTACTGCGGTGCACCCAGGCCCAGGCGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072514.3 |
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| CDS GCA 72 bp | CGCACATGCTCATCCTCACGAGCGCCTGGGCCTGGGTaGACCGCAGTAGGGAAGTGTGCGTGCTCCTCCGGT | + |
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Preference number: 6 (lower is better) Translates to: RTCSSSRAPGPG*TAVGKCACSSG Trigger: ACCGGAGGAGCACGCACACTTCCCTACTGCGGTGCACCCAGGCCCAGGCGCTCGTGAGGATGAGCATGTGCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072514.3 |
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| CDS GCA 72 bp | GGCGATCAGCGTTGGTGGTCTTGCGCTTGCACGCCTTaGAGGCCCACAGCAAGCAGCGACCCGCCTGGTGGT | + |
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Preference number: 6 (lower is better) Translates to: GDQRWWSCACTP*RPTASSDPPGG Trigger: ACCACCAGGCGGGTCGCTGCTTGCTGTGGGCCTGCAAGGCGTGCAAGCGCAAGACCACCAACGCTGATCGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072514.3 |
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| CDS GCA 72 bp | GCGCAGCGGGGCTGTCTGTGGAGATGCGCTCCACTATaGTGGACAGGCAGTCGAGGCTCGACACAGCCGCAC | + |
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Preference number: 6 (lower is better) Translates to: AQRGCLWRCAPL*WTGSRGSTQPH Trigger: GTGCGGCTGTGTCGAGCCTCGACTGCCTGTCCAGCATAGTGGAGCGCATCTCCACAGACAGCCCCGCTGCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072514.3 |
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| CDS CCA 72 bp | GGCGGTGTCGTAGCCATTCTGCCGCCGGGGGCCGCTTaGGGGGCCGCTGTAATCCATCATGCCATCAGAGCA | + |
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Preference number: 6 (lower is better) Translates to: GGVVAILPPGAA*GAAVIHHAIRA Trigger: TGCTCTGATGGCATGATGGATTACAGCGGCCCCCCAAGCGGCCCCCGGCGGCAGAATGGCTACGACACCGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000072514.3 |
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| CDS CCA 72 bp | AGTCGAGGCTCGACACAGCCGCACTCTTCCCTGGCCTaGACTCGCGCGCCGCCTCACTGTAGTAGGCGGTGT | + |
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Preference number: 6 (lower is better) Translates to: SRGSTQPHSSLA*TRAPPHCSRRC Trigger: ACACCGCCTACTACAGTGAGGCGGCGCGCGAGTCCAGGCCAGGGAAGAGTGCGGCTGTGTCGAGCCTCGACT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072514.3 |
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| CDS CCA 72 bp | CAGCGGGGCTGTCTGTGGAGATGCGCTCCACTATGCTaGACAGGCAGTCGAGGCTCGACACAGCCGCACTCT | + |
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Preference number: 6 (lower is better) Translates to: QRGCLWRCAPLC*TGSRGSTQPHS Trigger: AGAGTGCGGCTGTGTCGAGCCTCGACTGCCTGTCCAGCATAGTGGAGCGCATCTCCACAGACAGCCCCGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072514.3 |
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| CDS CCA 72 bp | CTGCCAAAAGCAGCGCAGGCGCAGCGGGGCTGTCTGTaGAGATGCGCTCCACTATGCTGGACAGGCAGTCGA | + |
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Preference number: 6 (lower is better) Translates to: LPKAAQAQRGCL*RCAPLCWTGSR Trigger: TCGACTGCCTGTCCAGCATAGTGGAGCGCATCTCCACAGACAGCCCCGCTGCGCCTGCGCTGCTTTTGGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072514.3 |
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