RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MYO7B (Mus musculus)

Ensembl gene IDs: ENSMUSG00000024388

Ensembl transcript IDs: ENSMUST00000134663.2

Found 416 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGGCGTGCTaGGAAGGGGGTAGAAGGCCAGCGTGGAAGGCTTGTGTGCAGATG +
Preference number: 1 (lower is better)
Translates to: AWPLQETPRRGTQAC*EGGRRPAWKACVQM
Trigger: CATCTGCACACAAGCCTTCCACGCTGGCCTTCTACCCCCTTCTCAGCACGCCTGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
3UTR CAA 90 bp CAGATTCAGGGGAGTTACCCACCATCTGTGAGGAGGCTGGAGACCTaGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGGCGT +
Preference number: 2 (lower is better)
Translates to: QIQGSYPPSVRRLET*LGLCRKHPGGALRR
Trigger: ACGCCTGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCCTCACAGATGGTGGGTAACTCCCCTGAATCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
3UTR-3UTR GCA 90 bp AGGTGCATTTTTATTGCAGATTCAGGGGAGTTACCCACCATCTGTGAGGAGGCTACCTTGCTTGGCCTCTaGAGGAAACACCCAGGAGGG +
Preference number: 2 (lower is better)
Translates to: RCIFIADSGELPTICEEATLLGL*RKHPGG
Trigger: CCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGT...AGCCTCCTCACAGATGGTGGGTAACTCCCCTGAATCTGCAATAAAAATGCACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
3UTR TCA 72 bp CTGCAGGAAACACCCAGGAGGGGCACTCAGGCGTGCTaGGAAGGGGGTAGAAGGCCAGCGTGGAAGGCTTGT +
Preference number: 3 (lower is better)
Translates to: LQETPRRGTQAC*EGGRRPAWKAC
Trigger: ACAAGCCTTCCACGCTGGCCTTCTACCCCCTTCTCAGCACGCCTGAGTGCCCCTCCTGGGTGTTTCCTGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR GCA 90 bp CCAGGAGGGGCACTCAGGCGTGCTGAGAAGGGGGTAGAAGGCCAGCGTGGAAGGATACGCCAGGGGGCCTaGCGCTGGCTCTCTCCCCTC +
Preference number: 4 (lower is better)
Translates to: PGGALRRAEKGVEGQRGRIRQGA*RWLSPL
Trigger: GAGGGGAGAGAGCCAGCGGCAGGCCCCCTGGCGTAT...CCTTCCACGCTGGCCTTCTACCCCCTTCTCAGCACGCCTGAGTGCCCCTCCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CCA 90 bp CCAGGAGGGGCACTCAGGCGTGCTGAGAAGGGGGTAGAAGGCCAGCGTGGAAGGGGTGGCTCCGGGCGATaGCCTGCAGGCGTTCAAAGC +
Preference number: 4 (lower is better)
Translates to: PGGALRRAEKGVEGQRGRGGSGR*PAGVQS
Trigger: GCTTTGAACGCCTGCAGGCCATCGCCCGGAGCCACC...CCTTCCACGCTGGCCTTCTACCCCCTTCTCAGCACGCCTGAGTGCCCCTCCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CCA 90 bp TGTGAGGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCGCAGCTCCAGCCAGGTaGGGGGTTCTGCGCGCACCC +
Preference number: 4 (lower is better)
Translates to: CEEAGDLAWPLQETPRRGAAPAR*GVLRAP
Trigger: GGGTGCGCGCAGAACCCCCCACCTGGCTGGAGCTGC...GCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCCTCACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR TCA 90 bp CCAGGAGGGGCACTCAGGCGTGCTGAGAAGGGGGTAGAAGGCCAGCGTGGAAGGGGCGACTCTGTGAGCTaGTCCTCCAGTGGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: PGGALRRAEKGVEGQRGRGDSVS*SSSGGS
Trigger: GGAGCCACCACTGGAGGATCAGCTCACAGAGTCGCC...CCTTCCACGCTGGCCTTCTACCCCCTTCTCAGCACGCCTGAGTGCCCCTCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR TCA 90 bp GGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCACCGGGGCGGGAGCCCTaGAGCCCCGCTGTTTGTTCA +
Preference number: 4 (lower is better)
Translates to: GGWRPCLASAGNTQEGHSPGREP*SPAVCS
Trigger: TGAACAAACAGCGGGGCTTCAGGGCTCCCGCCCCGG...TGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR GCA 90 bp CCAGGAGGGGCACTCAGGCGTGCTGAGAAGGGGGTAGAAGGCCAGCGTGGAAGGGGCCGAGCGGACGTGTaGGTAGTCCTTGGCATCGCT +
Preference number: 4 (lower is better)
Translates to: PGGALRRAEKGVEGQRGRGRADV*VVLGIA
Trigger: AGCGATGCCAAGGACTACGCACACGTCCGCTCGGCC...CCTTCCACGCTGGCCTTCTACCCCCTTCTCAGCACGCCTGAGTGCCCCTCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR GCA 90 bp CCAGGAGGGGCACTCAGGCGTGCTGAGAAGGGGGTAGAAGGCCAGCGTGGAAGGCTCCGGGCGATGGCCTaGAGGCGTTCAAAGCCCACT +
Preference number: 4 (lower is better)
Translates to: PGGALRRAEKGVEGQRGRLRAMA*RRSKPT
Trigger: AGTGGGCTTTGAACGCCTGCAGGCCATCGCCCGGAG...CCTTCCACGCTGGCCTTCTACCCCCTTCTCAGCACGCCTGAGTGCCCCTCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CCA 90 bp TGTGAGGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCGCTCCGTCCAGGGCCTaGCTCCTGCGGATCTCCAGC +
Preference number: 4 (lower is better)
Translates to: CEEAGDLAWPLQETPRRGAPSRA*LLRISS
Trigger: GCTGGAGATCCGCAGGAGCCAGGCCCTGGACGGAGC...GCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCCTCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CCA 90 bp CCAGGAGGGGCACTCAGGCGTGCTGAGAAGGGGGTAGAAGGCCAGCGTGGAAGGCAGCTTCTTCCCTCCTaGGGCGTCCCTGTTGGCGAC +
Preference number: 4 (lower is better)
Translates to: PGGALRRAEKGVEGQRGRQLLPS*GVPVGD
Trigger: GTCGCCAACAGGGACGCCCCAGGAGGGAAGAAGCTG...CCTTCCACGCTGGCCTTCTACCCCCTTCTCAGCACGCCTGAGTGCCCCTCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR GCA 90 bp GTGAGGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTGGATCCGGATCGCTaGTCCGTCCAGGGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: VRRLETLLGLCRKHPGGALDPDR*SVQGLA
Trigger: AGCCAGGCCCTGGACGGAGCAGCGATCCGGATCCAG...TGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCCTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR GCA 90 bp GGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGCACCAGGTAGCCCCTaGATCGGGCCTGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: GGWRPCLASAGNTQEGHSAPGSP*IGPAAA
Trigger: TGCAGCTGCAGGCCCGATGCAGGGGCTACCTGGTGC...TGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR GCA 90 bp GTGAGGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCAGTGAGCTCCAGGCTGTaGCAGGACTGGCGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: VRRLETLLGLCRKHPGGAVSSRL*QDWREG
Trigger: CCCTTCCCGCCAGTCCTGGCACAGCCTGGAGCTCAC...TGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCCTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CCA 90 bp CCAGGAGGGGCACTCAGGCGTGCTGAGAAGGGGGTAGAAGGCCAGCGTGGAAGGCACCAGTCTTGCTGCTaGAGGGAGGGTCCAGCCACA +
Preference number: 4 (lower is better)
Translates to: PGGALRRAEKGVEGQRGRHQSCC*REGPAT
Trigger: TGTGGCTGGACCCTCCCTCCAGCAGCAAGACTGGTG...CCTTCCACGCTGGCCTTCTACCCCCTTCTCAGCACGCCTGAGTGCCCCTCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CCA 90 bp GAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGCCTCGCCACCCTGCCTaGAGGGTCACAGCTGCACGT +
Preference number: 4 (lower is better)
Translates to: EAGDLAWPLQETPRRGTQPRHPA*RVTAAR
Trigger: ACGTGCAGCTGTGACCCTCCAGGCAGGGTGGCGAGG...CTGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CCA 90 bp TGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGGCGTGCTGAGAAGGTCCCAGGAGGCCAGCTaGAGCCTGGTGCCTATGCCC +
Preference number: 4 (lower is better)
Translates to: CLASAGNTQEGHSGVLRRSQEAS*SLVPMP
Trigger: GGGCATAGGCACCAGGCTCCAGCTGGCCTCCTGGGA...CCTTCTCAGCACGCCTGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR GCA 90 bp TGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGGCGTGCTGAGAAGGCCACACCAGTCTTGCTaGTGGAGGGAGGGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: CLASAGNTQEGHSGVLRRPHQSC*WREGPA
Trigger: GGCTGGACCCTCCCTCCAGCAGCAAGACTGGTGTGG...CCTTCTCAGCACGCCTGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR GCA 90 bp AGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGGGCCCCTCGGAGGATGTaGAGCTCCCCATGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: RLETLLGLCRKHPGGALRAPRRM*SSPWSG
Trigger: ACCTGACCATGGGGAGCTGCACATCCTCCGAGGGGC...CCTGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR GCA 90 bp TGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGGCGTGCTGAGAAGGCCAGGGCCTGGCTCCTaGGGATCTCCAGCACTGTGT +
Preference number: 4 (lower is better)
Translates to: CLASAGNTQEGHSGVLRRPGPGS*GSPALC
Trigger: ACACAGTGCTGGAGATCCGCAGGAGCCAGGCCCTGG...CCTTCTCAGCACGCCTGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR GCA 90 bp GTGAGGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCAATAGCCTCGCCACCCTaGCTGGAGGGTCACAGCTGC +
Preference number: 4 (lower is better)
Translates to: VRRLETLLGLCRKHPGGAIASPP*LEGHSC
Trigger: GCAGCTGTGACCCTCCAGGCAGGGTGGCGAGGCTAT...TGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCCTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR GCA 90 bp CCAGGAGGGGCACTCAGGCGTGCTGAGAAGGGGGTAGAAGGCCAGCGTGGAAGGACATCATGTGGGGGCTaGTTCCGAGGTCCCACCCTT +
Preference number: 4 (lower is better)
Translates to: PGGALRRAEKGVEGQRGRTSCGG*FRGPTL
Trigger: AAGGGTGGGACCTCGGAAGCAGCCCCCACATGATGT...CCTTCCACGCTGGCCTTCTACCCCCTTCTCAGCACGCCTGAGTGCCCCTCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CCA 90 bp GAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGTGTCTCATCAGCAGGTaGCTCCGGGCGATGGCCTGC +
Preference number: 4 (lower is better)
Translates to: EAGDLAWPLQETPRRGTQCLISR*LRAMAC
Trigger: GCAGGCCATCGCCCGGAGCCACCTGCTGATGAGACA...CTGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CCA 90 bp AGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGGGCCCTCCTCTTGGCCTaGACTTGCTGTCGCACCAGG +
Preference number: 4 (lower is better)
Translates to: RLETLLGLCRKHPGGALRALLLA*TCCRTR
Trigger: CCTGGTGCGACAGCAAGTCCAGGCCAAGAGGAGGGC...CCTGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CCA 90 bp TGTGAGGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCCTGATCCTCCAGTGGTaGCTCCAGAGCCCGCACCTC +
Preference number: 4 (lower is better)
Translates to: CEEAGDLAWPLQETPRRGLILQW*LQSPHL
Trigger: GAGGTGCGGGCTCTGGAGCCACCACTGGAGGATCAG...GCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCCTCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CCA 90 bp TGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGGCGTGCTGAGAAGGGAGCTGATCCTCCAGTaGTGGCTCCAGAGCCCGCAC +
Preference number: 4 (lower is better)
Translates to: CLASAGNTQEGHSGVLRRELILQ*WLQSPH
Trigger: GTGCGGGCTCTGGAGCCACCACTGGAGGATCAGCTC...CCTTCTCAGCACGCCTGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR TCA 90 bp ACCATCTGTGAGGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGATCCCAGACAGAGGCTaGGCAGGATCCAGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: TICEEAGDLAWPLQETPRIPDRG*AGSSPG
Trigger: CCCGGGGCTGGATCCTGCTCAGCCTCTGTCTGGGAT...CCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCCTCACAGATGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR TCA 90 bp CCAGGAGGGGCACTCAGGCGTGCTGAGAAGGGGGTAGAAGGCCAGCGTGGAAGGAGCCCAGATTGTCCCTaGGACCCTGTTTCTGAGCGA +
Preference number: 4 (lower is better)
Translates to: PGGALRRAEKGVEGQRGRSPDCP*DPVSER
Trigger: TCGCTCAGAAACAGGGTCTCAGGGACAATCTGGGCT...CCTTCCACGCTGGCCTTCTACCCCCTTCTCAGCACGCCTGAGTGCCCCTCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR TCA 90 bp GTGAGGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCAGGGTTGAGGGCTTGGTaGCCGAGGGGATGGTGTAGA +
Preference number: 4 (lower is better)
Translates to: VRRLETLLGLCRKHPGGAGLRAW*PRGWCR
Trigger: TCTACACCATCCCCTCGGTCACCAAGCCCTCAACCC...TGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR TCA 90 bp ACCATCTGTGAGGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGGCTCAGCAGCTGGGTTaGGGGCTTGGTGACCGAGGG +
Preference number: 4 (lower is better)
Translates to: TICEEAGDLAWPLQETPRAQQLG*GLGDRG
Trigger: CCCTCGGTCACCAAGCCCTCAACCCAGCTGCTGAGC...CCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCCTCACAGATGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR TCA 90 bp TGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGGCGTGCTGAGAAGGTGTCGTGGACAGATTTaGGCAGTGGCTGGCGCAGCG +
Preference number: 4 (lower is better)
Translates to: CLASAGNTQEGHSGVLRRCRGQI*AVAGAA
Trigger: CGCTGCGCCAGCCACTGCTCAAATCTGTCCACGACA...CCTTCTCAGCACGCCTGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR GCA 90 bp GAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGTGGGCTGAGTTGGGGTaGATAGGCCTGAGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: EAGDLAWPLQETPRRGTQWAELG*IGLRVL
Trigger: CAGCACCCTCAGGCCTATGCACCCCAACTCAGCCCA...CTGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR GCA 90 bp CCAGGAGGGGCACTCAGGCGTGCTGAGAAGGGGGTAGAAGGCCAGCGTGGAAGGTGGCAGATGGTGCCGTaGCCCAGCTTAGTCTGTGAT +
Preference number: 4 (lower is better)
Translates to: PGGALRRAEKGVEGQRGRWQMVP*PSLVCD
Trigger: ATCACAGACTAAGCTGGGGCACGGCACCATCTGCCA...CCTTCCACGCTGGCCTTCTACCCCCTTCTCAGCACGCCTGAGTGCCCCTCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR GCA 90 bp CCAGGAGGGGCACTCAGGCGTGCTGAGAAGGGGGTAGAAGGCCAGCGTGGAAGGACAGCTGCACGTCTCTaGCTCAGGAACTCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: PGGALRRAEKGVEGQRGRTAARL*LRNSFL
Trigger: CAGGAAGGAGTTCCTGAGGCAGAGACGTGCAGCTGT...CCTTCCACGCTGGCCTTCTACCCCCTTCTCAGCACGCCTGAGTGCCCCTCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR GCA 90 bp AGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGGCCCCTGCATCGGGCCTaGAGCTGCACTATCCTCTGT +
Preference number: 4 (lower is better)
Translates to: RLETLLGLCRKHPGGALRPLHRA*SCTILC
Trigger: ACAGAGGATAGTGCAGCTGCAGGCCCGATGCAGGGG...CCTGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR GCA 90 bp AGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGGGCCGCATCACTGAGCTaGCAGTCAGGCTGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: RLETLLGLCRKHPGGALRAASLS*QSGCSC
Trigger: GCAGGAACAGCCTGACTGGCAGCTCAGTGATGCGGC...CCTGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR GCA 90 bp GAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGGTGGCCCTTCTGTCCTaGAGGGCCATGGCGAACACA +
Preference number: 4 (lower is better)
Translates to: EAGDLAWPLQETPRRGTQVALLS*RAMANT
Trigger: TGTGTTCGCCATGGCCCTGCAGGACAGAAGGGCCAC...CTGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR GCA 90 bp GAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGCAGTACAGCTCATCCTaGAGGGCTGGGTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: EAGDLAWPLQETPRRGTQQYSSS*RAGSCR
Trigger: CCTGCAGGACCCAGCCCTGCAGGATGAGCTGTACTG...CTGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CCA 90 bp AGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGGGCCCTCCGCACATTTTaGGGATCCTGGGCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: RLETLLGLCRKHPGGALRALRTF*GSWAWG
Trigger: TCCCCAAGCCCAGGATCCCCAAAATGTGCGGAGGGC...CCTGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CCA 90 bp GGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCACCACTGCCCTCCTCTTaGCCTGGACTTGCTGTCGCA +
Preference number: 4 (lower is better)
Translates to: GGWRPCLASAGNTQEGHSPLPSS*PGLAVA
Trigger: TGCGACAGCAAGTCCAGGCCAAGAGGAGGGCAGTGG...TGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CCA 90 bp CGTGCTGAGAAGGGGGTAGAAGGCCAGCGTGGAAGGCTTGTGTGCAGATGGGACCTCACAGGGTCCTCCTaGGAGTCATGCCAGGGGGTG +
Preference number: 4 (lower is better)
Translates to: RAEKGVEGQRGRLVCRWDLTGSS*ESCQGV
Trigger: CACCCCCTGGCATGACTCCCAGGAGGACCCTGTGAG...GTCCCATCTGCACACAAGCCTTCCACGCTGGCCTTCTACCCCCTTCTCAGCACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CCA 90 bp CCAGGAGGGGCACTCAGGCGTGCTGAGAAGGGGGTAGAAGGCCAGCGTGGAAGGTGTCCTGCAGGGCCATaGCGAACACAGATCTCTCCT +
Preference number: 4 (lower is better)
Translates to: PGGALRRAEKGVEGQRGRCPAGP*RTQISP
Trigger: AGGAGAGATCTGTGTTCGCCATGGCCCTGCAGGACA...CCTTCCACGCTGGCCTTCTACCCCCTTCTCAGCACGCCTGAGTGCCCCTCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CCA 90 bp GGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGACAGATTTGAGCAGTaGCTGGCGCAGCGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: GGWRPCLASAGNTQEGHSDRFEQ*LAQRLW
Trigger: CCAGAGCCGCTGCGCCAGCCACTGCTCAAATCTGTC...TGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR TCA 90 bp AGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGGACGAATGCTGGCCACTaGCCGTGGCGAGGAACTGAA +
Preference number: 4 (lower is better)
Translates to: RLETLLGLCRKHPGGALRTNAGH*PWRGTE
Trigger: TTCAGTTCCTCGCCACGGTCAGTGGCCAGCATTCGT...CCTGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR TCA 90 bp GGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCACCCCTGGCATGTGCTTaGATGATCACCACTGCCCTC +
Preference number: 4 (lower is better)
Translates to: GGWRPCLASAGNTQEGHSPLACA*MITTAL
Trigger: GAGGGCAGTGGTGATCATTCAAGCACATGCCAGGGG...TGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR TCA 90 bp GTGAGGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCATGTGCTTCTTGGACTTaGCAGCCTGCAGCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: VRRLETLLGLCRKHPGGACASWT*QPAAPA
Trigger: GGCTGGAGCTGCAGGCTGTCAAGTCCAAGAAGCACA...TGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR TCA 90 bp TGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGGCGTGCTGAGAAGGAGAACATCTGGTCTGTaGGCTCCAGGCTGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: CLASAGNTQEGHSGVLRRRTSGL*APGCAR
Trigger: CCTGGCACAGCCTGGAGCTCACAGACCAGATGTTCT...CCTTCTCAGCACGCCTGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR TCA 90 bp AGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGGAGGCGTGTGAGGTTCTaGGGTACCAGCTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: RLETLLGLCRKHPGGALRRRVRF*GTSSFR
Trigger: CCTGAAGGAGCTGGTACCTCAGAACCTCACACGCCT...CCTGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR GCA 90 bp GGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAATCGGGTGTCATGGATaGTCCTGGGGCTCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: GGWRPCLASAGNTQEGHSIGCHG*SWGSGR
Trigger: CCTTCCTGAGCCCCAGGAGCATCCATGACACCCGAT...TGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR GCA 90 bp GTGAGGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCAAGCTGGTCCAGAGACTaGTTGAACTGGCTCGCGAGG +
Preference number: 4 (lower is better)
Translates to: VRRLETLLGLCRKHPGGASWSRD*LNWLAR
Trigger: CCTCGCGAGCCAGTTCAAGCAGTCTCTGGACCAGCT...TGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR GCA 90 bp TGTGAGGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCCTGGAGGGTCACAGCTaGACGTCTCTGCCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: CEEAGDLAWPLQETPRRGLEGHS*TSLPQE
Trigger: TTCCTGAGGCAGAGACGTGCAGCTGTGACCCTCCAG...GCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCCTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR GCA 90 bp TGTGAGGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCCATCGGGCCTGCAGCTaGACTATCCTCTGTCGCATG +
Preference number: 4 (lower is better)
Translates to: CEEAGDLAWPLQETPRRGHRACS*TILCRM
Trigger: CATGCGACAGAGGATAGTGCAGCTGCAGGCCCGATG...GCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCCTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR GCA 90 bp TGTGAGGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCTCCTCCTGGGAGTCATaGCAGGGGGTGAAGAACTCC +
Preference number: 4 (lower is better)
Translates to: CEEAGDLAWPLQETPRRGSSWES*QGVKNS
Trigger: GGAGTTCTTCACCCCCTGGCATGACTCCCAGGAGGA...GCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCCTCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR GCA 90 bp TGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGGCGTGCTGAGAAGGCAGACCCATGACCTCTaGGAAGGACAACCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: CLASAGNTQEGHSGVLRRQTHDL*EGQPQQ
Trigger: CTGCTGGGGTTGTCCTTCGCAGAGGTCATGGGTCTG...CCTTCTCAGCACGCCTGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR GCA 90 bp AGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGGGTGGGAAGAGACCTGTaGAGAGCCAGAGTAGCTGCC +
Preference number: 4 (lower is better)
Translates to: RLETLLGLCRKHPGGALRVGRDL*RARVAA
Trigger: GGCAGCTACTCTGGCTCTGCACAGGTCTCTTCCCAC...CCTGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CCA 90 bp GTGAGGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCATGTCCAGGAGACCGATaGCCCTCCGCACATTTTGGG +
Preference number: 4 (lower is better)
Translates to: VRRLETLLGLCRKHPGGACPGDR*PSAHFG
Trigger: CCCAAAATGTGCGGAGGGCCATCGGTCTCCTGGACA...TGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CCA 90 bp TGTGAGGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCCCAAATCGGGTGTCATaGATGCTCCTGGGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: CEEAGDLAWPLQETPRRGPNRVS*MLLGLR
Trigger: CCTGAGCCCCAGGAGCATCCATGACACCCGATTTGG...GCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCCTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CCA 90 bp AGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGGATCCTCAAAGCGTGTTaGGGCTGGACCCTCCTGACC +
Preference number: 4 (lower is better)
Translates to: RLETLLGLCRKHPGGALRILKAC*GWTLLT
Trigger: GGTCAGGAGGGTCCAGCCCCAACACGCTTTGAGGAT...CCTGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CCA 90 bp TGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGGCGTGCTGAGAAGGTACTGGGCCTTGGCATaGGCAGCGGTGACAAGGCTA +
Preference number: 4 (lower is better)
Translates to: CLASAGNTQEGHSGVLRRYWALA*AAVTRL
Trigger: TAGCCTTGTCACCGCTGCCCATGCCAAGGCCCAGTA...CCTTCTCAGCACGCCTGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CCA 90 bp TGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGGCGTGCTGAGAAGGAAACCAGCTGCGTCTTaGGAAGGCGGGGACCAGAGA +
Preference number: 4 (lower is better)
Translates to: CLASAGNTQEGHSGVLRRKPAAS*EGGDQR
Trigger: TCTCTGGTCCCCGCCTTCCCAAGACGCAGCTGGTTT...CCTTCTCAGCACGCCTGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CCA 90 bp GGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAATGAGACCTCCCAGGTaGATGGCATCTTCCCGGGAG +
Preference number: 4 (lower is better)
Translates to: GGWRPCLASAGNTQEGHSMRPPR*MASSRE
Trigger: CTCCCGGGAAGATGCCATCCACCTGGGAGGTCTCAT...TGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
3UTR CAA 72 bp GGGAGTTACCCACCATCTGTGAGGAGGCTGGAGACCTaGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCA +
Preference number: 4 (lower is better)
Translates to: GSYPPSVRRLET*LGLCRKHPGGA
Trigger: TGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCCTCACAGATGGTGGGTAACTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR TCA 90 bp AGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGGCTGCCAGCAGCTTGCTaGTGTCCCAGTTCTCTGAGT +
Preference number: 4 (lower is better)
Translates to: RLETLLGLCRKHPGGALRLPAAC*CPSSLS
Trigger: ACTCAGAGAACTGGGACATCAGCAAGCTGCTGGCAG...CCTGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR TCA 90 bp TGTGAGGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCCAAAGACTGCAGCCATaGACCCCACATTCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: CEEAGDLAWPLQETPRRGQRLQP*TPHSPG
Trigger: ACCTGGGGAATGTGGGGTTCATGGCTGCAGTCTTTG...GCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCCTCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR TCA 90 bp CGTGCTGAGAAGGGGGTAGAAGGCCAGCGTGGAAGGCTTGTGTGCAGATGGGACGATCTGCCGCATCACTaGGCTGCCAGTCAGGCTGTT +
Preference number: 4 (lower is better)
Translates to: RAEKGVEGQRGRLVCRWDDLPHH*AASQAV
Trigger: AACAGCCTGACTGGCAGCTCAGTGATGCGGCAGATC...GTCCCATCTGCACACAAGCCTTCCACGCTGGCCTTCTACCCCCTTCTCAGCACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR TCA 90 bp AGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGGCTTCATGAACCTCTCTaGGGGTGGGAAGCATCCCAG +
Preference number: 4 (lower is better)
Translates to: RLETLLGLCRKHPGGALRLHEPL*GWEASQ
Trigger: CTGGGATGCTTCCCACCCTCAGAGAGGTTCATGAAG...CCTGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR TCA 90 bp GGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAAGTCATGCCAGGGGGTaGAGAACTCCTTCCGGAAGT +
Preference number: 4 (lower is better)
Translates to: GGWRPCLASAGNTQEGHSSHARG*RTPSGS
Trigger: ACTTCCGGAAGGAGTTCTTCACCCCCTGGCATGACT...TGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR TCA 90 bp GGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAAGGACATCAGGCGTGTaGGGTTCTGAGGTACCAGCT +
Preference number: 4 (lower is better)
Translates to: GGWRPCLASAGNTQEGHSRTSGV*GSEVPA
Trigger: AGCTGGTACCTCAGAACCTCACACGCCTGATGTCCT...TGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR GCA 90 bp GGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGAAGAGCTGGCTTCCTaGCTTCACCTGGCAGATGGT +
Preference number: 4 (lower is better)
Translates to: GGWRPCLASAGNTQEGHSEELAS*LHLADG
Trigger: ACCATCTGCCAGGTGAAGGCAGGAAGCCAGCTCTTC...TGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR GCA 90 bp TGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGGCGTGCTGAGAAGGCCTGACTTGCGGATGTaGACAGTCTCCATCATGCCG +
Preference number: 4 (lower is better)
Translates to: CLASAGNTQEGHSGVLRRPDLRM*TVSIMP
Trigger: CGGCATGATGGAGACTGTGCACATCCGCAAGTCAGG...CCTTCTCAGCACGCCTGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR GCA 90 bp GAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGCAGTCAGGCTGTTCCTaGCATAGACCACTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: EAGDLAWPLQETPRRGTQQSGCS*HRPLAL
Trigger: CAGAGCCAGTGGTCTATGGCAGGAACAGCCTGACTG...CTGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR GCA 90 bp TGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGGCGTGCTGAGAAGGATGGCTAAAACCAGCTaGGTCTTGGGAAGGCGGGGA +
Preference number: 4 (lower is better)
Translates to: CLASAGNTQEGHSGVLRRMAKTS*VLGRRG
Trigger: TCCCCGCCTTCCCAAGACGCAGCTGGTTTTAGCCAT...CCTTCTCAGCACGCCTGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CCA 90 bp AGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGGTACAGGGGCAGCATCTaGAATGGGTTCACAGCCACC +
Preference number: 4 (lower is better)
Translates to: RLETLLGLCRKHPGGALRYRGSI*NGFTAT
Trigger: GGTGGCTGTGAACCCATTCCAGATGCTGCCCCTGTA...CCTGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CCA 90 bp ACCATCTGTGAGGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGGCAATGGCGAAGATGTaGGGAGGCAGCTCGCCCATG +
Preference number: 4 (lower is better)
Translates to: TICEEAGDLAWPLQETPRAMAKM*GGSSPM
Trigger: CATGGGCGAGCTGCCTCCCCACATCTTCGCCATTGC...CCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCCTCACAGATGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CCA 90 bp ACCATCTGTGAGGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGTCGATCCACGAATGCTaGCCACTGACCGTGGCGAGG +
Preference number: 4 (lower is better)
Translates to: TICEEAGDLAWPLQETPRSIHEC*PLTVAR
Trigger: CCTCGCCACGGTCAGTGGCCAGCATTCGTGGATCGA...CCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCCTCACAGATGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CCA 90 bp CGTGCTGAGAAGGGGGTAGAAGGCCAGCGTGGAAGGCTTGTGTGCAGATGGGACACTGGAGGATCTTCATaGCCGAGCGGACGTGTGCGT +
Preference number: 4 (lower is better)
Translates to: RAEKGVEGQRGRLVCRWDTGGSS*PSGRVR
Trigger: ACGCACACGTCCGCTCGGCCATGAAGATCCTCCAGT...GTCCCATCTGCACACAAGCCTTCCACGCTGGCCTTCTACCCCCTTCTCAGCACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CCA 90 bp CCAGGAGGGGCACTCAGGCGTGCTGAGAAGGGGGTAGAAGGCCAGCGTGGAAGGTCTGAGTCTGAGAACTaGAGGATCTTCATGGCCGAG +
Preference number: 4 (lower is better)
Translates to: PGGALRRAEKGVEGQRGRSESEN*RIFMAE
Trigger: CTCGGCCATGAAGATCCTCCAGTTCTCAGACTCAGA...CCTTCCACGCTGGCCTTCTACCCCCTTCTCAGCACGCCTGAGTGCCCCTCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CCA 90 bp CGTGCTGAGAAGGGGGTAGAAGGCCAGCGTGGAAGGCTTGTGTGCAGATGGGACTGGAGGGAACACAGCTaGGCAACAGCTCCTGGACAG +
Preference number: 4 (lower is better)
Translates to: RAEKGVEGQRGRLVCRWDWREHS*ATAPGQ
Trigger: CTGTCCAGGAGCTGTTGCCCAGCTGTGTTCCCTCCA...GTCCCATCTGCACACAAGCCTTCCACGCTGGCCTTCTACCCCCTTCTCAGCACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CCA 90 bp GTGAGGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCAGCTAGCCCACTTCTCTaGAGACTTGGTCCGGTACAG +
Preference number: 4 (lower is better)
Translates to: VRRLETLLGLCRKHPGGAASPLL*RLGPVQ
Trigger: CTGTACCGGACCAAGTCTCCAGAGAAGTGGGCTAGC...TGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR TCA 90 bp ACCATCTGTGAGGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGGCCCATAGATGCCCTTaGCAAAGGCATCCCTCCGGT +
Preference number: 4 (lower is better)
Translates to: TICEEAGDLAWPLQETPRAHRCP*QRHPSG
Trigger: ACCGGAGGGATGCCTTTGTCAAGGGCATCTATGGGC...CCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCCTCACAGATGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR TCA 90 bp AGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGGTGGAGTCTGATGACTTaGAGAGCTGGCTTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: RLETLLGLCRKHPGGALRWSLMT*RAGFLP
Trigger: AGGCAGGAAGCCAGCTCTTCAAGTCATCAGACTCCA...CCTGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR TCA 90 bp CGTGCTGAGAAGGGGGTAGAAGGCCAGCGTGGAAGGCTTGTGTGCAGATGGGACGCGGATGGGAAAACCTaGCTTGCGGATGTGCACAGT +
Preference number: 4 (lower is better)
Translates to: RAEKGVEGQRGRLVCRWDADGKT*LADVHS
Trigger: ACTGTGCACATCCGCAAGTCAGGTTTTCCCATCCGC...GTCCCATCTGCACACAAGCCTTCCACGCTGGCCTTCTACCCCCTTCTCAGCACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR TCA 90 bp GTGAGGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCATGGCATGTGCTTGAATaGTCACCACTGCCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: VRRLETLLGLCRKHPGGAWHVLE*SPLPSS
Trigger: AGAGGAGGGCAGTGGTGATCATTCAAGCACATGCCA...TGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR TCA 90 bp TGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGGCGTGCTGAGAAGGTGGCGTAGCCCACAATaGAGTGCACCTTCTCTAGGT +
Preference number: 4 (lower is better)
Translates to: CLASAGNTQEGHSGVLRRWRSPQ*SAPSLG
Trigger: ACCTAGAGAAGGTGCACTTCATTGTGGGCTACGCCA...CCTTCTCAGCACGCCTGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR TCA 90 bp TGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGGCGTGCTGAGAAGGGGACTTGGTGGTAAATaGGCTCAGTGCTCACAGGGT +
Preference number: 4 (lower is better)
Translates to: CLASAGNTQEGHSGVLRRGLGGK*AQCSQG
Trigger: ACCCTGTGAGCACTGAGCTCATTTACCACCAAGTCC...CCTTCTCAGCACGCCTGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR TCA 90 bp AGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGGGACCAGAGAGTGTGGTaGCTTCAAATAGCCGGGAGA +
Preference number: 4 (lower is better)
Translates to: RLETLLGLCRKHPGGALRDQRVW*LQIAGR
Trigger: TCTCCCGGCTATTTGAAGTCACCACACTCTCTGGTC...CCTGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR TCA 90 bp GTGAGGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCAAGTGTCCTCTCCTTCTaGTCCAGGAAGTACATCCCC +
Preference number: 4 (lower is better)
Translates to: VRRLETLLGLCRKHPGGASVLSF*SRKYIP
Trigger: GGGGATGTACTTCCTGGATCAGAAGGAGAGGACACT...TGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR TCA 90 bp TGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGGCGTGCTGAGAAGGCAGAGCCCAGTTCTCTaGGGCCAACAGTCCTTGTTT +
Preference number: 4 (lower is better)
Translates to: CLASAGNTQEGHSGVLRRQSPVL*GQQSLF
Trigger: AAACAAGGACTGTTGGCCTCAGAGAACTGGGCTCTG...CCTTCTCAGCACGCCTGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR TCA 90 bp TGTGAGGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCCTCCTTCAGGACCTTTaGGACACTAGCCAGTTGCGA +
Preference number: 4 (lower is better)
Translates to: CEEAGDLAWPLQETPRRGLLQDL*DTSQLR
Trigger: TCGCAACTGGCTAGTGTCTCAAAGGTCCTGAAGGAG...GCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCCTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR TCA 90 bp GTGAGGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCAGAGCTGCTGTACATATaGGGTCAGCAGGTCGTCCAT +
Preference number: 4 (lower is better)
Translates to: VRRLETLLGLCRKHPGGAELLYI*GQQVVH
Trigger: ATGGACGACCTGCTGACCTCATATGTACAGCAGCTC...TGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR GCA 90 bp GTGAGGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCAGGACCCAGTGTTCCTTaGCCTCGTCATCCTCAATCA +
Preference number: 4 (lower is better)
Translates to: VRRLETLLGLCRKHPGGAGPSVP*PRHPQS
Trigger: TGATTGAGGATGACGAGGGCAAGGAACACTGGGTCC...TGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR GCA 90 bp ACCATCTGTGAGGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGGCCTCCAGGACCTGTTaGTCGATCCACGAATGCTGG +
Preference number: 4 (lower is better)
Translates to: TICEEAGDLAWPLQETPRASRTC*SIHECW
Trigger: CCAGCATTCGTGGATCGAGCAACAGGTCCTGGAGGC...CCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCCTCACAGATGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR GCA 90 bp AGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGGGGTACTCAGAGGGCATaGCCAGACTCAGCATTTGCT +
Preference number: 4 (lower is better)
Translates to: RLETLLGLCRKHPGGALRGTQRA*PDSAFA
Trigger: AGCAAATGCTGAGTCTGGGCATGCCCTCTGAGTACC...CCTGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR GCA 90 bp GTGAGGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCATTGAATGATCACCACTaGCCTCCTCTTGGCCTGGAC +
Preference number: 4 (lower is better)
Translates to: VRRLETLLGLCRKHPGGALNDHH*PPLGLD
Trigger: GTCCAGGCCAAGAGGAGGGCAGTGGTGATCATTCAA...TGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR GCA 90 bp GTGAGGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACATGCCCCTGGCATGTaGTTGAATGATCACCACTGC +
Preference number: 4 (lower is better)
Translates to: VRRLETLLGLCRKHPGGAHAPGM*LNDHHC
Trigger: GCAGTGGTGATCATTCAAGCACATGCCAGGGGCATG...TGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR GCA 90 bp GAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGACCTGGATCGGGATGTaGTTCTTGGACTTGACAGCC +
Preference number: 4 (lower is better)
Translates to: EAGDLAWPLQETPRRGTQTWIGM*FLDLTA
Trigger: GGCTGTCAAGTCCAAGAAGCACATCCCGATCCAGGT...CTGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR GCA 90 bp AGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGGGCACCAGCCCTGTCTTaGCAGTTCTGTCATTCTGAC +
Preference number: 4 (lower is better)
Translates to: RLETLLGLCRKHPGGALRAPALS*QFCHSD
Trigger: GTCAGAATGACAGAACTGGCAAGACAGGGCTGGTGC...CCTGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR GCA 90 bp CGTGCTGAGAAGGGGGTAGAAGGCCAGCGTGGAAGGCTTGTGTGCAGATGGGACGGAGCCTGGTGCCTATaGCCTCACATAGGTCTCTCA +
Preference number: 4 (lower is better)
Translates to: RAEKGVEGQRGRLVCRWDGAWCL*PHIGLS
Trigger: TGAGAGACCTATGTGAGGGCATAGGCACCAGGCTCC...GTCCCATCTGCACACAAGCCTTCCACGCTGGCCTTCTACCCCCTTCTCAGCACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR GCA 90 bp GAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGCTCCACTTTGGCCTCTaGCACTGTCTTGCGCTTGTT +
Preference number: 4 (lower is better)
Translates to: EAGDLAWPLQETPRRGTQLHFGL*HCLALV
Trigger: AACAAGCGCAAGACAGTGGCAGAGGCCAAAGTGGAG...CTGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CCA 90 bp TGTGAGGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCTGTCATGGATGCTCCTaGGGCTCAGGAAGGACTTGT +
Preference number: 4 (lower is better)
Translates to: CEEAGDLAWPLQETPRRGCHGCS*GSGRTC
Trigger: ACAAGTCCTTCCTGAGCCCCAGGAGCATCCATGACA...GCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCCTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CCA 90 bp CCAGGAGGGGCACTCAGGCGTGCTGAGAAGGGGGTAGAAGGCCAGCGTGGAAGGAGGATTCTCATCAGCTaGTCCAGAGACTGCTTGAAC +
Preference number: 4 (lower is better)
Translates to: PGGALRRAEKGVEGQRGRRILIS*SRDCLN
Trigger: GTTCAAGCAGTCTCTGGACCAGCTGATGAGAATCCT...CCTTCCACGCTGGCCTTCTACCCCCTTCTCAGCACGCCTGAGTGCCCCTCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CCA 90 bp CCAGGAGGGGCACTCAGGCGTGCTGAGAAGGGGGTAGAAGGCCAGCGTGGAAGGAATAGGGCTGGCAGTTaGTCAGGATTCTCATCAGCT +
Preference number: 4 (lower is better)
Translates to: PGGALRRAEKGVEGQRGRNRAGS*SGFSSA
Trigger: AGCTGATGAGAATCCTGACCAACTGCCAGCCCTATT...CCTTCCACGCTGGCCTTCTACCCCCTTCTCAGCACGCCTGAGTGCCCCTCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CCA 90 bp TGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGGCGTGCTGAGAAGGGGATGTGGGTGTGGCTaGCTGACTTCTGGAAGTAAG +
Preference number: 4 (lower is better)
Translates to: CLASAGNTQEGHSGVLRRGCGCG*LTSGSK
Trigger: CTTACTTCCAGAAGTCAGCCAGCCACACCCACATCC...CCTTCTCAGCACGCCTGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CCA 90 bp TGTGAGGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCCAAAGTTCAGCTGGCTaGCCACCTGTGAGGATCTGT +
Preference number: 4 (lower is better)
Translates to: CEEAGDLAWPLQETPRRGQSSAG*PPVRIC
Trigger: ACAGATCCTCACAGGTGGCCAGCCAGCTGAACTTTG...GCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCCTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CCA 90 bp GAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGGTTGCCAGGATGACCTaGATCGGGATGTGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: EAGDLAWPLQETPRRGTQVARMT*IGMCFL
Trigger: CAAGAAGCACATCCCGATCCAGGTCATCCTGGCAAC...CTGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CCA 90 bp TGTGAGGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCGTTTCTCTGGTGACATaGCCAGCAAGCTCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: CEEAGDLAWPLQETPRRGVSLVT*PASSAA
Trigger: AGCTGCTGAGCTTGCTGGCCATGTCACCAGAGAAAC...GCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCCTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CCA 90 bp CGTGCTGAGAAGGGGGTAGAAGGCCAGCGTGGAAGGCTTGTGTGCAGATGGGACGAGGCCCCTTCTTTCTaGGGCCTGTTCTTCTTCACC +
Preference number: 4 (lower is better)
Translates to: RAEKGVEGQRGRLVCRWDEAPSF*GLFFFT
Trigger: GGTGAAGAAGAACAGGCCCCAGAAAGAAGGGGCCTC...GTCCCATCTGCACACAAGCCTTCCACGCTGGCCTTCTACCCCCTTCTCAGCACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR TCA 90 bp TGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGGCGTGCTGAGAAGGCCATCGCTGTGTCAGTaGCAGTGTCATAGATGGACT +
Preference number: 4 (lower is better)
Translates to: CLASAGNTQEGHSGVLRRPSLCQ*QCHRWT
Trigger: AGTCCATCTATGACACTGTCACTGACACAGCGATGG...CCTTCTCAGCACGCCTGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR TCA 90 bp ACCATCTGTGAGGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGGTGGGTGTGGCTGGCTaGCTTCTGGAAGTAAGTCAC +
Preference number: 4 (lower is better)
Translates to: TICEEAGDLAWPLQETPRVGVAG*LLEVSH
Trigger: GTGACTTACTTCCAGAAGTCAGCCAGCCACACCCAC...CCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCCTCACAGATGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR TCA 90 bp GTGAGGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCATCAGCAGATACTTCATaGACCTCTCTGAGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: VRRLETLLGLCRKHPGGASADTS*TSLRVG
Trigger: TCCCACCCTCAGAGAGGTTCATGAAGTATCTGCTGA...TGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR TCA 90 bp ACCATCTGTGAGGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGCTTCCGTTTCTCTGGTaGCATGGCCAGCAAGCTCAG +
Preference number: 4 (lower is better)
Translates to: TICEEAGDLAWPLQETPRLPFLW*HGQQAQ
Trigger: CTGAGCTTGCTGGCCATGTCACCAGAGAAACGGAAG...CCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCCTCACAGATGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR TCA 90 bp TGTGAGGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTGGATTTTACAGATaGGACCTCCCAGGTGGATGG +
Preference number: 4 (lower is better)
Translates to: CEEAGDLAWPLQETPRRGTGFYR*DLPGGW
Trigger: CCATCCACCTGGGAGGTCTCATCTGTAAAATCCAGT...GCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCCTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR TCA 90 bp GTGAGGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCAAGCTGGAGATCTTGGTaGAAGGGTAGGTGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: VRRLETLLGLCRKHPGGASWRSW*KGRCSA
Trigger: TGCTGAACACCTACCCTTTCACCAAGATCTCCAGCT...TGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR GCA 90 bp CGTGCTGAGAAGGGGGTAGAAGGCCAGCGTGGAAGGCTTGTGTGCAGATGGGACGGTGCTGAGGTCTTCTaGATGGACCCAGTGTTCCTT +
Preference number: 4 (lower is better)
Translates to: RAEKGVEGQRGRLVCRWDGAEVF*MDPVFL
Trigger: AAGGAACACTGGGTCCATGCAGAAGACCTCAGCACC...GTCCCATCTGCACACAAGCCTTCCACGCTGGCCTTCTACCCCCTTCTCAGCACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR GCA 90 bp CGTGCTGAGAAGGGGGTAGAAGGCCAGCGTGGAAGGCTTGTGTGCAGATGGGACAGAAGATGTGGTAGTTaGGTTCCTCTGGAGCCTGCC +
Preference number: 4 (lower is better)
Translates to: RAEKGVEGQRGRLVCRWDRRCGS*VPLEPA
Trigger: GGCAGGCTCCAGAGGAACGCAACTACCACATCTTCT...GTCCCATCTGCACACAAGCCTTCCACGCTGGCCTTCTACCCCCTTCTCAGCACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR GCA 90 bp CGTGCTGAGAAGGGGGTAGAAGGCCAGCGTGGAAGGCTTGTGTGCAGATGGGACGACAGGTACTCTTCCTaGTCCATCGTGAACACGTGC +
Preference number: 4 (lower is better)
Translates to: RAEKGVEGQRGRLVCRWDDRYSS*SIVNTC
Trigger: GCACGTGTTCACGATGGAGCAGGAAGAGTACCTGTC...GTCCCATCTGCACACAAGCCTTCCACGCTGGCCTTCTACCCCCTTCTCAGCACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR GCA 90 bp AGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGGTGGGAAAACCTGACTTaGGGATGTGCACAGTCTCCA +
Preference number: 4 (lower is better)
Translates to: RLETLLGLCRKHPGGALRWENLT*GCAQSP
Trigger: TGGAGACTGTGCACATCCGCAAGTCAGGTTTTCCCA...CCTGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR GCA 90 bp CGTGCTGAGAAGGGGGTAGAAGGCCAGCGTGGAAGGCTTGTGTGCAGATGGGACCCACTTCCATGGACTTaGTGGTGTCATTGGGGAGGT +
Preference number: 4 (lower is better)
Translates to: RAEKGVEGQRGRLVCRWDPLPWT*WCHWGG
Trigger: ACCTCCCCAATGACACCAGCAAGTCCATGGAAGTGG...GTCCCATCTGCACACAAGCCTTCCACGCTGGCCTTCTACCCCCTTCTCAGCACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR GCA 90 bp TGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGGCGTGCTGAGAAGGGAGACACTAGCCAGTTaGGAGCTGTCACTACCAAAC +
Preference number: 4 (lower is better)
Translates to: CLASAGNTQEGHSGVLRRETLAS*ELSLPN
Trigger: GTTTGGTAGTGACAGCTCGCAACTGGCTAGTGTCTC...CCTTCTCAGCACGCCTGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CCA 90 bp ACCATCTGTGAGGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGACTTCCCGAAGCGGCTaGAGTTGTCATTGCGGATGG +
Preference number: 4 (lower is better)
Translates to: TICEEAGDLAWPLQETPRTSRSG*SCHCGW
Trigger: CCATCCGCAATGACAACTCCAGCCGCTTCGGGAAGT...CCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCCTCACAGATGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CCA 90 bp TGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGGCGTGCTGAGAAGGTGCCAAGGGGAAGGCTaGAGTTTCCATCACATCAGA +
Preference number: 4 (lower is better)
Translates to: CLASAGNTQEGHSGVLRRCQGEG*SFHHIR
Trigger: TCTGATGTGATGGAAACTCCAGCCTTCCCCTTGGCA...CCTTCTCAGCACGCCTGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CCA 90 bp CCAGGAGGGGCACTCAGGCGTGCTGAGAAGGGGGTAGAAGGCCAGCGTGGAAGGAAGTCACAGCAAACTTaGGGAAGGTATACTCAGCCA +
Preference number: 4 (lower is better)
Translates to: PGGALRRAEKGVEGQRGRKSQQT*GRYTQP
Trigger: TGGCTGAGTATACCTTCCCCAAGTTTGCTGTGACTT...CCTTCCACGCTGGCCTTCTACCCCCTTCTCAGCACGCCTGAGTGCCCCTCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CCA 90 bp GAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGTCATATACAGCGACCTaGAGGGAGAAGCCCAGATTG +
Preference number: 4 (lower is better)
Translates to: EAGDLAWPLQETPRRGTQSYTAT*REKPRL
Trigger: CAATCTGGGCTTCTCCCTCCAGGTCGCTGTATATGA...CTGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CCA 90 bp GTGAGGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCAACTTGCTGGTGTCATTaGGGAGGTAGACCTCATGGT +
Preference number: 4 (lower is better)
Translates to: VRRLETLLGLCRKHPGGATCWCH*GGRPHG
Trigger: ACCATGAGGTCTACCTCCCCAATGACACCAGCAAGT...TGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CCA 90 bp AGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGGCTTCCATGGACTTGCTaGTGTCATTGGGGAGGTAGA +
Preference number: 4 (lower is better)
Translates to: RLETLLGLCRKHPGGALRLPWTC*CHWGGR
Trigger: TCTACCTCCCCAATGACACCAGCAAGTCCATGGAAG...CCTGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CCA 90 bp GAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGTCCTTGGTCTTGGGGTaGATGAGCAGTAACCCATGT +
Preference number: 4 (lower is better)
Translates to: EAGDLAWPLQETPRRGTQSLVLG*MSSNPC
Trigger: ACATGGGTTACTGCTCATCCACCCCAAGACCAAGGA...CTGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR TCA 90 bp GTGAGGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCATTCACGAAGAATTGCTaGAGGTGCTCGTTGGCAAAG +
Preference number: 4 (lower is better)
Translates to: VRRLETLLGLCRKHPGGAFTKNC*RCSLAK
Trigger: CTTTGCCAACGAGCACCTTCAGCAATTCTTCGTGAA...TGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR TCA 90 bp GTGAGGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCAGGATGTAGTTCCAGGTaGTGTTCTCAGACAGGTACT +
Preference number: 4 (lower is better)
Translates to: VRRLETLLGLCRKHPGGAGCSSR*CSQTGT
Trigger: AGTACCTGTCTGAGAACATCACCTGGAACTACATCC...TGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR TCA 90 bp TGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGGCGTGCTGAGAAGGAGACATGGGTCTGTCTaGGATAGGGCCATCAAACTT +
Preference number: 4 (lower is better)
Translates to: CLASAGNTQEGHSGVLRRRHGSV*DRAIKL
Trigger: AAGTTTGATGGCCCTATCTCAGACAGACCCATGTCT...CCTTCTCAGCACGCCTGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR TCA 90 bp ACCATCTGTGAGGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGCCAGTTCTGTCATTCTaGCCCAGAGCCCAGTTCTCT +
Preference number: 4 (lower is better)
Translates to: TICEEAGDLAWPLQETPRPVLSF*PRAQFS
Trigger: AGAGAACTGGGCTCTGGGTCAGAATGACAGAACTGG...CCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCCTCACAGATGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR TCA 90 bp AGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGGCTTTTTCCATTCTTCTaGGGACATCAGGCGTGTGAG +
Preference number: 4 (lower is better)
Translates to: RLETLLGLCRKHPGGALRLFPFF*GHQACE
Trigger: CTCACACGCCTGATGTCCTCAGAAGAATGGAAAAAG...CCTGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR GCA 90 bp TGTGAGGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCCAGGTTCTCAAAGACTaGAGCCATGAACCCCACATT +
Preference number: 4 (lower is better)
Translates to: CEEAGDLAWPLQETPRRGQVLKD*SHEPHI
Trigger: AATGTGGGGTTCATGGCTGCAGTCTTTGAGAACCTG...GCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCCTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR GCA 90 bp CGTGCTGAGAAGGGGGTAGAAGGCCAGCGTGGAAGGCTTGTGTGCAGATGGGACAGTTTGTCATGGATCTaGCGCATCACTGAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: RAEKGVEGQRGRLVCRWDSLSWI*RITELP
Trigger: TGGCAGCTCAGTGATGCGGCAGATCCATGACAAACT...GTCCCATCTGCACACAAGCCTTCCACGCTGGCCTTCTACCCCCTTCTCAGCACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR GCA 90 bp CGTGCTGAGAAGGGGGTAGAAGGCCAGCGTGGAAGGCTTGTGTGCAGATGGGACATGGAGTATGGTGTCTaGATTCACGTCCTTCCCAGG +
Preference number: 4 (lower is better)
Translates to: RAEKGVEGQRGRLVCRWDMEYGV*IHVLPR
Trigger: CCTGGGAAGGACGTGAATGCAGACACCATACTCCAT...GTCCCATCTGCACACAAGCCTTCCACGCTGGCCTTCTACCCCCTTCTCAGCACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR GCA 90 bp GGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCATGTGGAAATAGGTGTTaGCACTACTCCAGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: GGWRPCLASAGNTQEGHSCGNRC*HYSSWR
Trigger: TCTCCAGCTGGAGTAGTGGCAACACCTATTTCCACA...TGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CCA 90 bp TGTGAGGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCCAAATGTGTAGCGGATaGGAAAACCTGACTTGCGGA +
Preference number: 4 (lower is better)
Translates to: CEEAGDLAWPLQETPRRGQMCSG*ENLTCG
Trigger: TCCGCAAGTCAGGTTTTCCCATCCGCTACACATTTG...GCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCCTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CCA 90 bp CCAGGAGGGGCACTCAGGCGTGCTGAGAAGGGGGTAGAAGGCCAGCGTGGAAGGCCTTCAGGAAGATTTTaGTCTTTCCGACTTTCCAGT +
Preference number: 4 (lower is better)
Translates to: PGGALRRAEKGVEGQRGRPSGRF*SFRLSS
Trigger: ACTGGAAAGTCGGAAAGACCAAAATCTTCCTGAAGG...CCTTCCACGCTGGCCTTCTACCCCCTTCTCAGCACGCCTGAGTGCCCCTCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CCA 90 bp TGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGGCGTGCTGAGAAGGCGCAACTTGAGCCTTTaGTTCCTTAGCCAGAATGAC +
Preference number: 4 (lower is better)
Translates to: CLASAGNTQEGHSGVLRRRNLSL*FLSQND
Trigger: GTCATTCTGGCTAAGGAACCAAAGGCTCAAGTTGCG...CCTTCTCAGCACGCCTGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CCA 90 bp AGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGGACCTCCAATCATGGCTaGGAGGAAGCCAAACACTTT +
Preference number: 4 (lower is better)
Translates to: RLETLLGLCRKHPGGALRTSNHG*EEAKHF
Trigger: AAAGTGTTTGGCTTCCTCCCAGCCATGATTGGAGGT...CCTGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CCA 90 bp AGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGGTCTAGAGCAGCCGAGTaGTCAGTGTCATTTTCATGG +
Preference number: 4 (lower is better)
Translates to: RLETLLGLCRKHPGGALRSRAAE*SVSFSW
Trigger: CCATGAAAATGACACTGACCACTCGGCTGCTCTAGA...CCTGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CCA 90 bp GTGAGGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACCTCATGGTGTAATTTaGAGACATTCTGCTCAGCCG +
Preference number: 4 (lower is better)
Translates to: VRRLETLLGLCRKHPGGAPHGVI*RHSAQP
Trigger: CGGCTGAGCAGAATGTCTCCAAATTACACCATGAGG...TGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CCA 90 bp GGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGGTGGTAATGGAGTATaGTGTCTGCATTCACGTCCT +
Preference number: 4 (lower is better)
Translates to: GGWRPCLASAGNTQEGHSGGNGV*CLHSRP
Trigger: AGGACGTGAATGCAGACACCATACTCCATTACCACC...TGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR TCA 90 bp ACCATCTGTGAGGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGTTAGCCAGAATGACCTaGGGCCCAGTGCTTTTCTGT +
Preference number: 4 (lower is better)
Translates to: TICEEAGDLAWPLQETPRLARMT*GPVLFC
Trigger: ACAGAAAAGCACTGGGCCTCAGGTCATTCTGGCTAA...CCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCCTCACAGATGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR TCA 90 bp AGGTGCATTTTTATTGCAGATTCAGGGGAGTTACCCACCATCTGTGAGGAGGCTGGGGCTGGACCCTCCTaGCCTCCAATCATGGCTGGG +
Preference number: 4 (lower is better)
Translates to: RCIFIADSGELPTICEEAGAGPS*PPIMAG
Trigger: CCCAGCCATGATTGGAGGTCAGGAGGGTCCAGCCCC...AGCCTCCTCACAGATGGTGGGTAACTCCCCTGAATCTGCAATAAAAATGCACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR TCA 90 bp ACCATCTGTGAGGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGCTTTCTCCGGAGCCCTaGAGAACTGGTAGGAGAATT +
Preference number: 4 (lower is better)
Translates to: TICEEAGDLAWPLQETPRLSPEP*RTGRRI
Trigger: AATTCTCCTACCAGTTCTTCAGGGCTCCGGAGAAAG...CCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCCTCACAGATGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR GCA 90 bp TGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGGCGTGCTGAGAAGGTCATCCCCATCAGCATaGAGTAGAAGATGTGGTAGT +
Preference number: 4 (lower is better)
Translates to: CLASAGNTQEGHSGVLRRSSPSA*SRRCGS
Trigger: ACTACCACATCTTCTACTGCATGCTGATGGGGATGA...CCTTCTCAGCACGCCTGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR GCA 90 bp TGTGAGGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCTCTCGGAGAGCTGCTTaGAGATCTGACAGTAGATTT +
Preference number: 4 (lower is better)
Translates to: CEEAGDLAWPLQETPRRGSRRAA*RSDSRF
Trigger: AAATCTACTGTCAGATCTGCAAGCAGCTCTCCGAGA...GCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCCTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR GCA 90 bp GTGAGGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACCTCTGCCACTGTCTTaGGCTTGTTTTTGTCACATT +
Preference number: 4 (lower is better)
Translates to: VRRLETLLGLCRKHPGGAPLPLS*ACFCHI
Trigger: AATGTGACAAAAACAAGCGCAAGACAGTGGCAGAGG...TGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCCTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CCA 90 bp TGTGAGGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCCTGATGATACAGCACTaGTCCCTCTTGTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: CEEAGDLAWPLQETPRRGLMIQH*SLLFFF
Trigger: GAAGAAGAACAAGAGGGACCAGTGCTGTATCATCAG...GCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCCTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CCA 90 bp ACCATCTGTGAGGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGATAGACCACTGGCTCTaGAAGGTCACCCATGAACCT +
Preference number: 4 (lower is better)
Translates to: TICEEAGDLAWPLQETPRIDHWL*KVTHEP
Trigger: AGGTTCATGGGTGACCTTCCAGAGCCAGTGGTCTAT...CCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCCTCACAGATGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CCA 90 bp ACCATCTGTGAGGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGATTTCTCGTGATGTaGAGGCGGAGTCCACAGAGA +
Preference number: 4 (lower is better)
Translates to: TICEEAGDLAWPLQETPRRFLVM*RRSPQR
Trigger: TCTCTGTGGACTCCGCCTCCACATCACGAGAAATCT...CCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCCTCACAGATGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CCA 90 bp ACCATCTGTGAGGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGGATGAGGAGAATGTCTaGGTAGGAAGGCTCAGAGGT +
Preference number: 4 (lower is better)
Translates to: TICEEAGDLAWPLQETPRDEENV*VGRLRG
Trigger: ACCTCTGAGCCTTCCTACCCAGACATTCTCCTCATC...CCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCCTCACAGATGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CCA 90 bp TGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGGCGTGCTGAGAAGGGACTTGTTGTTGGCATaGATACTGTTCAGTTTCTGC +
Preference number: 4 (lower is better)
Translates to: CLASAGNTQEGHSGVLRRDLLLA*ILFSFC
Trigger: GCAGAAACTGAACAGTATCCATGCCAACAACAAGTC...CCTTCTCAGCACGCCTGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CCA 90 bp AGGTGCATTTTTATTGCAGATTCAGGGGAGTTACCCACCATCTGTGAGGAGGCTCTTCCTGCCTTCACCTaGCAGATGGTGCCGTGCCCC +
Preference number: 4 (lower is better)
Translates to: RCIFIADSGELPTICEEALPAFT*QMVPCP
Trigger: GGGGCACGGCACCATCTGCCAGGTGAAGGCAGGAAG...AGCCTCCTCACAGATGGTGGGTAACTCCCCTGAATCTGCAATAAAAATGCACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CCA 90 bp TGTGAGGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACAGTCCTTGTTTCTTaGTCAGGATCAGTAAGTCAC +
Preference number: 4 (lower is better)
Translates to: CEEAGDLAWPLQETPRRGTVLVS*SGSVSH
Trigger: GTGACTTACTGATCCTGACCAAGAAACAAGGACTGT...GCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCCTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CCA 90 bp AGGTGCATTTTTATTGCAGATTCAGGGGAGTTACCCACCATCTGTGAGGAGGCTAGAGCCCGCACCTCCTaGGCTGCCAGCTTCCGTTTC +
Preference number: 4 (lower is better)
Translates to: RCIFIADSGELPTICEEARARTS*AASFRF
Trigger: GAAACGGAAGCTGGCAGCCCAGGAGGTGCGGGCTCT...AGCCTCCTCACAGATGGTGGGTAACTCCCCTGAATCTGCAATAAAAATGCACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR TCA 90 bp GGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCACCACTAGGATCAGCTTaGAATTCTTTCTTTGGCTAT +
Preference number: 4 (lower is better)
Translates to: GGWRPCLASAGNTQEGHSPLGSA*NSFFGY
Trigger: ATAGCCAAAGAAAGAATTTCAAGCTGATCCTAGTGG...TGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR GCA 90 bp AGGTGCATTTTTATTGCAGATTCAGGGGAGTTACCCACCATCTGTGAGGAGGCTTTGGACTTGACAGCCTaGAGCTCCAGCCAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: RCIFIADSGELPTICEEALDLTA*SSSQVG
Trigger: CCCCACCTGGCTGGAGCTGCAGGCTGTCAAGTCCAA...AGCCTCCTCACAGATGGTGGGTAACTCCCCTGAATCTGCAATAAAAATGCACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CCA 90 bp CGTGCTGAGAAGGGGGTAGAAGGCCAGCGTGGAAGGCTTGTGTGCAGATGGGACCCACTAGAATTGAAGTaGATGTCAATGTACTTCCCG +
Preference number: 4 (lower is better)
Translates to: RAEKGVEGQRGRLVCRWDPLELK*MSMYFP
Trigger: CGGGAAGTACATTGACATCCACTTCAATTCTAGTGG...GTCCCATCTGCACACAAGCCTTCCACGCTGGCCTTCTACCCCCTTCTCAGCACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR GCA 90 bp AGGTGCATTTTTATTGCAGATTCAGGGGAGTTACCCACCATCTGTGAGGAGGCTCAGGTGGAGGATGGCTaGCAGCAGCTTGCTGATGTC +
Preference number: 4 (lower is better)
Translates to: RCIFIADSGELPTICEEAQVEDG*QQLADV
Trigger: GACATCAGCAAGCTGCTGGCAGCCATCCTCCACCTG...AGCCTCCTCACAGATGGTGGGTAACTCCCCTGAATCTGCAATAAAAATGCACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR GCA 90 bp CGTGCTGAGAAGGGGGTAGAAGGCCAGCGTGGAAGGCTTGTGTGCAGATGGGACATACTGTTCAGTTTCTaGAGCATAGTGACATCTGTC +
Preference number: 4 (lower is better)
Translates to: RAEKGVEGQRGRLVCRWDILFSF*SIVTSV
Trigger: GACAGATGTCACTATGCTGCAGAAACTGAACAGTAT...GTCCCATCTGCACACAAGCCTTCCACGCTGGCCTTCTACCCCCTTCTCAGCACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR GCA 90 bp ACCATCTGTGAGGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGGGATTAGGATATCTGTaGTCAGCACATCTCGATTCT +
Preference number: 4 (lower is better)
Translates to: TICEEAGDLAWPLQETPRGLGYL*SAHLDS
Trigger: AGAATCGAGATGTGCTGAGCACAGATATCCTAATCC...CCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCCTCACAGATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR GCA 90 bp AGGTGCATTTTTATTGCAGATTCAGGGGAGTTACCCACCATCTGTGAGGAGGCTTGCAGGGCTGGGTCCTaGAGGGCTAACGAGAACATC +
Preference number: 4 (lower is better)
Translates to: RCIFIADSGELPTICEEACRAGS*RANENI
Trigger: GATGTTCTCGTTAGCCCTGCAGGACCCAGCCCTGCA...AGCCTCCTCACAGATGGTGGGTAACTCCCCTGAATCTGCAATAAAAATGCACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CCA 90 bp AGGTGCATTTTTATTGCAGATTCAGGGGAGTTACCCACCATCTGTGAGGAGGCTCCTGCCGGCAGACTCTaGACTTCTCCAGGAGGAAGT +
Preference number: 4 (lower is better)
Translates to: RCIFIADSGELPTICEEAPAGRL*TSPGGS
Trigger: ACTTCCTCCTGGAGAAGTCCAGAGTCTGCCGGCAGG...AGCCTCCTCACAGATGGTGGGTAACTCCCCTGAATCTGCAATAAAAATGCACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR TCA 90 bp AGGTGCATTTTTATTGCAGATTCAGGGGAGTTACCCACCATCTGTGAGGAGGCTACCGTGGCGAGGAACTaGAGGATAAGCTTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: RCIFIADSGELPTICEEATVARN*RISLVV
Trigger: GACCACCAAGCTTATCCTTCAGTTCCTCGCCACGGT...AGCCTCCTCACAGATGGTGGGTAACTCCCCTGAATCTGCAATAAAAATGCACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR TCA 90 bp AGGTGCATTTTTATTGCAGATTCAGGGGAGTTACCCACCATCTGTGAGGAGGCTTGTATGGCGACTCTGTaGGCTGATCCTCCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: RCIFIADSGELPTICEEACMATL*ADPPVV
Trigger: CACCACTGGAGGATCAGCTCACAGAGTCGCCATACA...AGCCTCCTCACAGATGGTGGGTAACTCCCCTGAATCTGCAATAAAAATGCACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR TCA 90 bp AGGTGCATTTTTATTGCAGATTCAGGGGAGTTACCCACCATCTGTGAGGAGGCTTGGTCTTGGGGTGGATaGGCAGTAACCCATGTCGGT +
Preference number: 4 (lower is better)
Translates to: RCIFIADSGELPTICEEAWSWGG*AVTHVG
Trigger: ACCGACATGGGTTACTGCTCATCCACCCCAAGACCA...AGCCTCCTCACAGATGGTGGGTAACTCCCCTGAATCTGCAATAAAAATGCACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR GCA 90 bp AGGTGCATTTTTATTGCAGATTCAGGGGAGTTACCCACCATCTGTGAGGAGGCTCGGATCAGGAGGTTGTaGACCACACCAGCCTCATTC +
Preference number: 4 (lower is better)
Translates to: RCIFIADSGELPTICEEARIRRL*TTPASF
Trigger: GAATGAGGCTGGTGTGGTGCACAACCTCCTGATCCG...AGCCTCCTCACAGATGGTGGGTAACTCCCCTGAATCTGCAATAAAAATGCACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR GCA 90 bp AGGTGCATTTTTATTGCAGATTCAGGGGAGTTACCCACCATCTGTGAGGAGGCTGCCCAGGCTCCCCAGTaGCATGTGGAAATAGGTGTT +
Preference number: 4 (lower is better)
Translates to: RCIFIADSGELPTICEEAAQAPQ*HVEIGV
Trigger: AACACCTATTTCCACATGGCACTGGGGAGCCTGGGC...AGCCTCCTCACAGATGGTGGGTAACTCCCCTGAATCTGCAATAAAAATGCACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CCA 90 bp AGGTGCATTTTTATTGCAGATTCAGGGGAGTTACCCACCATCTGTGAGGAGGCTCTCTGTCGCATGGCCTaGAACTGTCTCATCAGCAGG +
Preference number: 4 (lower is better)
Translates to: RCIFIADSGELPTICEEALCRMA*NCLISR
Trigger: CCTGCTGATGAGACAGTTCCAGGCCATGCGACAGAG...AGCCTCCTCACAGATGGTGGGTAACTCCCCTGAATCTGCAATAAAAATGCACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR GCA 90 bp AGGTGCATTTTTATTGCAGATTCAGGGGAGTTACCCACCATCTGTGAGGAGGCTGCACAGTCTCCATCATaGCGGAATAACGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: RCIFIADSGELPTICEEAAQSPS*RNNAAA
Trigger: AGCAGCTGCGTTATTCCGGCATGATGGAGACTGTGC...AGCCTCCTCACAGATGGTGGGTAACTCCCCTGAATCTGCAATAAAAATGCACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CCA 90 bp AGGTGCATTTTTATTGCAGATTCAGGGGAGTTACCCACCATCTGTGAGGAGGCTTTCTGGATGTGGGTGTaGCTGGCTGACTTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: RCIFIADSGELPTICEEAFWMWV*LADFWK
Trigger: CTTCCAGAAGTCAGCCAGCCACACCCACATCCAGAA...AGCCTCCTCACAGATGGTGGGTAACTCCCCTGAATCTGCAATAAAAATGCACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CCA 90 bp AGGTGCATTTTTATTGCAGATTCAGGGGAGTTACCCACCATCTGTGAGGAGGCTAGCTGCTTCAGGATCTaGCAGTACAGCTCATCCTGC +
Preference number: 4 (lower is better)
Translates to: RCIFIADSGELPTICEEASCFRI*QYSSSC
Trigger: GCAGGATGAGCTGTACTGCCAGATCCTGAAGCAGCT...AGCCTCCTCACAGATGGTGGGTAACTCCCCTGAATCTGCAATAAAAATGCACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CCA 90 bp AGGTGCATTTTTATTGCAGATTCAGGGGAGTTACCCACCATCTGTGAGGAGGCTCTATCCTCTGTCGCATaGCCTGGAACTGTCTCATCA +
Preference number: 4 (lower is better)
Translates to: RCIFIADSGELPTICEEALSSVA*PGTVSS
Trigger: TGATGAGACAGTTCCAGGCCATGCGACAGAGGATAG...AGCCTCCTCACAGATGGTGGGTAACTCCCCTGAATCTGCAATAAAAATGCACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CCA 90 bp AGGTGCATTTTTATTGCAGATTCAGGGGAGTTACCCACCATCTGTGAGGAGGCTTCAAGAACTCCACTTTaGCCTCTGCCACTGTCTTGC +
Preference number: 4 (lower is better)
Translates to: RCIFIADSGELPTICEEASRTPL*PLPLSC
Trigger: GCAAGACAGTGGCAGAGGCCAAAGTGGAGTTCTTGA...AGCCTCCTCACAGATGGTGGGTAACTCCCCTGAATCTGCAATAAAAATGCACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR TCA 90 bp AGGTGCATTTTTATTGCAGATTCAGGGGAGTTACCCACCATCTGTGAGGAGGCTCCAGTTTTGTTTCTTTaGCAATGCCCCCAATGGCCA +
Preference number: 4 (lower is better)
Translates to: RCIFIADSGELPTICEEAPVLFL*QCPQWP
Trigger: TGGCCATTGGGGGCATTGTCAAAGAAACAAAACTGG...AGCCTCCTCACAGATGGTGGGTAACTCCCCTGAATCTGCAATAAAAATGCACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR GCA 90 bp AGGTGCATTTTTATTGCAGATTCAGGGGAGTTACCCACCATCTGTGAGGAGGCTACTGTATTCAGGAGCTaGTGTACATATGAGGTCAGC +
Preference number: 4 (lower is better)
Translates to: RCIFIADSGELPTICEEATVFRS*CTYEVS
Trigger: GCTGACCTCATATGTACAGCAGCTCCTGAATACAGT...AGCCTCCTCACAGATGGTGGGTAACTCCCCTGAATCTGCAATAAAAATGCACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CCA 90 bp AGGTGCATTTTTATTGCAGATTCAGGGGAGTTACCCACCATCTGTGAGGAGGCTGGAAGGACTTGTTGTTaGCATGGATACTGTTCAGTT +
Preference number: 4 (lower is better)
Translates to: RCIFIADSGELPTICEEAGRTCC*HGYCSV
Trigger: AACTGAACAGTATCCATGCCAACAACAAGTCCTTCC...AGCCTCCTCACAGATGGTGGGTAACTCCCCTGAATCTGCAATAAAAATGCACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS GCA 90 bp CGCCAGGGGGCCTGCCGCTGGCTCTCTCCCCTCTCTCGGGCCAGTTaGTCACACTGGGCCACAGCATCCATCAAATGGTCACAGCCGCTG +
Preference number: 5 (lower is better)
Translates to: RQGACRWLSPLSRAS*SHWATASIKWSQPL
Trigger: CAGCGGCTGTGACCATTTGATGGATGCTGTGGCCCAGTGTGAGCAACTGGCCCGAGAGAGGGGAGAGAGCCAGCGGCAGGCCCCCTGGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CCA 90 bp CCCCTGCATCGGGCCTGCAGCTGCACTATCCTCTGTCGCATGGCCTaGAACTGTCTCATCAGCAGGTGGCTCCGGGCGATGGCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: PLHRACSCTILCRMA*NCLISRWLRAMACR
Trigger: CCTGCAGGCCATCGCCCGGAGCCACCTGCTGATGAGACAGTTCCAGGCCATGCGACAGAGGATAGTGCAGCTGCAGGCCCGATGCAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CCA 90 bp GGTAGCCCCTGCATCGGGCCTGCAGCTGCACTATCCTCTGTCGCATaGCCTGGAACTGTCTCATCAGCAGGTGGCTCCGGGCGATGGCCT +
Preference number: 5 (lower is better)
Translates to: GSPCIGPAAALSSVA*PGTVSSAGGSGRWP
Trigger: AGGCCATCGCCCGGAGCCACCTGCTGATGAGACAGTTCCAGGCCATGCGACAGAGGATAGTGCAGCTGCAGGCCCGATGCAGGGGCTACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CCA 90 bp GGCTTTGTCGTGGACAGATTTGAGCAGTGGCTGGCGCAGCGGCTCTaGGGAGTAGGCCCAGAGATGACCCCGGCTTCGGGCCATGGGCAT +
Preference number: 5 (lower is better)
Translates to: GFVVDRFEQWLAQRL*GVGPEMTPASGHGH
Trigger: ATGCCCATGGCCCGAAGCCGGGGTCATCTCTGGGCCTACTCCCCAGAGCCGCTGCGCCAGCCACTGCTCAAATCTGTCCACGACAAAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CAA 90 bp GGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGGCCCTCCGCACATTTaGGGGATCCTGGGCTTGGGG +
Preference number: 5 (lower is better)
Translates to: GGWRPCLASAGNTQEGHSGPPHI*GILGLG
Trigger: CCCCAAGCCCAGGATCCCCAAAATGTGCGGAGGGCC...TGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS GCA 90 bp CTTCCTGTACTTGTGTCCCCGGAGGACTCTCTGGATCCGGATCGCTaGTCCGTCCAGGGCCTGGCTCCTGCGGATCTCCAGCACTGTGTC +
Preference number: 5 (lower is better)
Translates to: LPVLVSPEDSLDPDR*SVQGLAPADLQHCV
Trigger: GACACAGTGCTGGAGATCCGCAGGAGCCAGGCCCTGGACGGAGCAGCGATCCGGATCCAGAGAGTCCTCCGGGGACACAAGTACAGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CCA 90 bp GGCTGCATCCCGCAGTTTGGCTTTGTCGTGGACAGATTTGAGCAGTaGCTGGCGCAGCGGCTCTGGGGAGTAGGCCCAGAGATGACCCCG +
Preference number: 5 (lower is better)
Translates to: GCIPQFGFVVDRFEQ*LAQRLWGVGPEMTP
Trigger: CGGGGTCATCTCTGGGCCTACTCCCCAGAGCCGCTGCGCCAGCCACTGCTCAAATCTGTCCACGACAAAGCCAAACTGCGGGATGCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CAA 90 bp GAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGACCACTGCCCTCCTCTaGGCCTGGACTTGCTGTCGC +
Preference number: 5 (lower is better)
Translates to: EAGDLAWPLQETPRRGTQTTALL*AWTCCR
Trigger: GCGACAGCAAGTCCAGGCCAAGAGGAGGGCAGTGGT...CTGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CCA 90 bp TTCCTCCAGGGTGTATGGCGACTCTGTGAGCTGATCCTCCAGTGGTaGCTCCAGAGCCCGCACCTCCTGGGCTGCCAGCTTCCGTTTCTC +
Preference number: 5 (lower is better)
Translates to: FLQGVWRLCELILQW*LQSPHLLGCQLPFL
Trigger: GAGAAACGGAAGCTGGCAGCCCAGGAGGTGCGGGCTCTGGAGCCACCACTGGAGGATCAGCTCACAGAGTCGCCATACACCCTGGAGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CAA 90 bp TGTGAGGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCGGCCTCCAGGACCTGTaGCTCGATCCACGAATGCTG +
Preference number: 5 (lower is better)
Translates to: CEEAGDLAWPLQETPRRGGLQDL*LDPRML
Trigger: CAGCATTCGTGGATCGAGCAACAGGTCCTGGAGGCC...GCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCCTCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CAA 90 bp CCAGGAGGGGCACTCAGGCGTGCTGAGAAGGGGGTAGAAGGCCAGCGTGGAAGGGCCCAGACTCAGCATTaGCTTCTCTTCCGGGCTCAT +
Preference number: 5 (lower is better)
Translates to: PGGALRRAEKGVEGQRGRAQTQH*LLFRAH
Trigger: ATGAGCCCGGAAGAGAAGCAAATGCTGAGTCTGGGC...CCTTCCACGCTGGCCTTCTACCCCCTTCTCAGCACGCCTGAGTGCCCCTCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CAA 90 bp GTGAGGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCAGATCCTCAAAGCGTGTaGGGGCTGGACCCTCCTGAC +
Preference number: 5 (lower is better)
Translates to: VRRLETLLGLCRKHPGGADPQSV*GLDPPD
Trigger: GTCAGGAGGGTCCAGCCCCAACACGCTTTGAGGATC...TGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CAA 90 bp CCAGGAGGGGCACTCAGGCGTGCTGAGAAGGGGGTAGAAGGCCAGCGTGGAAGGATTGGCGAAGGTGCGTaGCAGCCGTTCAGCACAGAA +
Preference number: 5 (lower is better)
Translates to: PGGALRRAEKGVEGQRGRIGEGA*QPFSTE
Trigger: TTCTGTGCTGAACGGCTGCAACGCACCTTCGCCAAT...CCTTCCACGCTGGCCTTCTACCCCCTTCTCAGCACGCCTGAGTGCCCCTCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CAA 90 bp ACCATCTGTGAGGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGCCTCTCTCGGGCCAGTaGCTCACACTGGGCCACAGC +
Preference number: 5 (lower is better)
Translates to: TICEEAGDLAWPLQETPRPLSGQ*LTLGHS
Trigger: GCTGTGGCCCAGTGTGAGCAACTGGCCCGAGAGAGG...CCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCCTCACAGATGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CAA 90 bp TGTGAGGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCTGGGTATACTGGGCCTaGGCATGGGCAGCGGTGACA +
Preference number: 5 (lower is better)
Translates to: CEEAGDLAWPLQETPRRGWVYWA*AWAAVT
Trigger: TGTCACCGCTGCCCATGCCAAGGCCCAGTATACCCA...GCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCCTCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS TCA 90 bp TCTGGCAGGCTGCATCCCGCAGTTTGGCTTTGTCGTGGACAGATTTaGGCAGTGGCTGGCGCAGCGGCTCTGGGGAGTAGGCCCAGAGAT +
Preference number: 5 (lower is better)
Translates to: SGRLHPAVWLCRGQI*AVAGAAALGSRPRD
Trigger: ATCTCTGGGCCTACTCCCCAGAGCCGCTGCGCCAGCCACTGCTCAAATCTGTCCACGACAAAGCCAAACTGCGGGATGCAGCCTGCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS GCA 90 bp CTTCCCTCCTGGGGCGTCCCTGTTGGCGACCAGACCCATGACCTCTaGGAAGGACAACCCCAGCAGTGTCCTCTCCTTCTGATCCAGGAA +
Preference number: 5 (lower is better)
Translates to: LPSWGVPVGDQTHDL*EGQPQQCPLLLIQE
Trigger: TTCCTGGATCAGAAGGAGAGGACACTGCTGGGGTTGTCCTTCGCAGAGGTCATGGGTCTGGTCGCCAACAGGGACGCCCCAGGAGGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CCA 90 bp GAACACAGCTGGGCAACAGCTCCTGGACAGCGTTACTCTTCACCGTaGCCCCAAGCTGCACATAGCAGTGCCGGGCCAGCAGCTCCACAA +
Preference number: 5 (lower is better)
Translates to: EHSWATAPGQRYSSP*PQAAHSSAGPAAPQ
Trigger: TTGTGGAGCTGCTGGCCCGGCACTGCTATGTGCAGCTTGGGGCCACGGTGAAGAGTAACGCTGTCCAGGAGCTGTTGCCCAGCTGTGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CCA 90 bp GAATTCCTCCAGGGTGTATGGCGACTCTGTGAGCTGATCCTCCAGTaGTGGCTCCAGAGCCCGCACCTCCTGGGCTGCCAGCTTCCGTTT +
Preference number: 5 (lower is better)
Translates to: EFLQGVWRLCELILQ*WLQSPHLLGCQLPF
Trigger: AAACGGAAGCTGGCAGCCCAGGAGGTGCGGGCTCTGGAGCCACCACTGGAGGATCAGCTCACAGAGTCGCCATACACCCTGGAGGAATTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CAA 90 bp GAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGTACCGGATCAGGAGGTaGTGCACCACACCAGCCTCA +
Preference number: 5 (lower is better)
Translates to: EAGDLAWPLQETPRRGTQYRIRR*CTTPAS
Trigger: TGAGGCTGGTGTGGTGCACAACCTCCTGATCCGGTA...CTGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CAA 90 bp AGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGGATGATGCTCATGGGCTaGAGGGCCAGCATGTCCAGG +
Preference number: 5 (lower is better)
Translates to: RLETLLGLCRKHPGGALRMMLMG*RASMSR
Trigger: CCTGGACATGCTGGCCCTCAAGCCCATGAGCATCAT...CCTGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CAA 90 bp TGTGAGGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCTTGTCGTGGACAGATTaGAGCAGTGGCTGGCGCAGC +
Preference number: 5 (lower is better)
Translates to: CEEAGDLAWPLQETPRRGLSWTD*SSGWRS
Trigger: GCTGCGCCAGCCACTGCTCAAATCTGTCCACGACAA...GCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCCTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CAA 90 bp CCAGGAGGGGCACTCAGGCGTGCTGAGAAGGGGGTAGAAGGCCAGCGTGGAAGGCTGAAGCCCCGCTGTTaGTTCACTGTATTCAGGAGC +
Preference number: 5 (lower is better)
Translates to: PGGALRRAEKGVEGQRGRLKPRC*FTVFRS
Trigger: GCTCCTGAATACAGTGAACAAACAGCGGGGCTTCAG...CCTTCCACGCTGGCCTTCTACCCCCTTCTCAGCACGCCTGAGTGCCCCTCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS TCA 90 bp CCAGGCTGTGCCAGGACTGGCGGGAAGGGTAGTCACCTGTGTACTTaGGGATGGCAAGGAAGATCTGGCAGGCTGCATCCCGCAGTTTGG +
Preference number: 5 (lower is better)
Translates to: PGCARTGGKGSHLCT*GWQGRSGRLHPAVW
Trigger: CCAAACTGCGGGATGCAGCCTGCCAGATCTTCCTTGCCATCCTCAAGTACACAGGTGACTACCCTTCCCGCCAGTCCTGGCACAGCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS GCA 90 bp CTTCCGGACAACCATGCCCCTGGCATGTGCTTGAATGATCACCACTaGCCTCCTCTTGGCCTGGACTTGCTGTCGCACCAGGTAGCCCCT +
Preference number: 5 (lower is better)
Translates to: LPDNHAPGMCLNDHH*PPLGLDLLSHQVAP
Trigger: AGGGGCTACCTGGTGCGACAGCAAGTCCAGGCCAAGAGGAGGGCAGTGGTGATCATTCAAGCACATGCCAGGGGCATGGTTGTCCGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CCA 90 bp TGCACTATCCTCTGTCGCATGGCCTGGAACTGTCTCATCAGCAGGTaGCTCCGGGCGATGGCCTGCAGGCGTTCAAAGCCCACTAGGATC +
Preference number: 5 (lower is better)
Translates to: CTILCRMAWNCLISR*LRAMACRRSKPTRI
Trigger: GATCCTAGTGGGCTTTGAACGCCTGCAGGCCATCGCCCGGAGCCACCTGCTGATGAGACAGTTCCAGGCCATGCGACAGAGGATAGTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CAA 90 bp GAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGAACTCCTTCCTGTACTaGTGTCCCCGGAGGACTCTC +
Preference number: 5 (lower is better)
Translates to: EAGDLAWPLQETPRRGTQNSFLY*CPRRTL
Trigger: GAGAGTCCTCCGGGGACACAAGTACAGGAAGGAGTT...CTGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CAA 90 bp GTGAGGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTGTCCTTGCCCAGTTaGTCATGGATCTGCCGCATC +
Preference number: 5 (lower is better)
Translates to: VRRLETLLGLCRKHPGGALSLPS*SWICRI
Trigger: GATGCGGCAGATCCATGACAAACTGGGCAAGGACAG...TGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS TCA 90 bp GCCAGTAGCTCTTCCGGACAACCATGCCCCTGGCATGTGCTTGAATaGTCACCACTGCCCTCCTCTTGGCCTGGACTTGCTGTCGCACCA +
Preference number: 5 (lower is better)
Translates to: ASSSSGQPCPWHVLE*SPLPSSWPGLAVAP
Trigger: TGGTGCGACAGCAAGTCCAGGCCAAGAGGAGGGCAGTGGTGATCATTCAAGCACATGCCAGGGGCATGGTTGTCCGGAAGAGCTACTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS TCA 90 bp GTCCCTGAGACCCTGTTTCTGAGCGACGTGCTGGCAGATTTCTCGTaGTGTGGAGGCGGAGTCCACAGAGATGGTCAGGCTCCTTCCGGT +
Preference number: 5 (lower is better)
Translates to: VPETLFLSDVLADFS*CGGGVHRDGQAPSG
Trigger: ACCGGAAGGAGCCTGACCATCTCTGTGGACTCCGCCTCCACATCACGAGAAATCTGCCAGCACGTCGCTCAGAAACAGGGTCTCAGGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS TCA 90 bp AGTTATACTCGCCAGACCACACCCCACGGAGGACTTGGTGGTAAATaGGCTCAGTGCTCACAGGGTCCTCCTGGGAGTCATGCCAGGGGG +
Preference number: 5 (lower is better)
Translates to: SYTRQTTPHGGLGGK*AQCSQGPPGSHARG
Trigger: CCCCCTGGCATGACTCCCAGGAGGACCCTGTGAGCACTGAGCTCATTTACCACCAAGTCCTCCGTGGGGTGTGGTCTGGCGAGTATAACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS GCA 90 bp CTTTCTTTGGCTATAGCCTCGCCACCCTGCCTGGAGGGTCACAGCTaGACGTCTCTGCCTCAGGAACTCCTTCCTGTACTTGTGTCCCCG +
Preference number: 5 (lower is better)
Translates to: LSLAIASPPCLEGHS*TSLPQELLPVLVSP
Trigger: CGGGGACACAAGTACAGGAAGGAGTTCCTGAGGCAGAGACGTGCAGCTGTGACCCTCCAGGCAGGGTGGCGAGGCTATAGCCAAAGAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CCA 90 bp GAGTCCACAGAGATGGTCAGGCTCCTTCCGGTTGCCAGGATGACCTaGATCGGGATGTGCTTCTTGGACTTGACAGCCTGCAGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: ESTEMVRLLPVARMT*IGMCFLDLTACSSS
Trigger: GCTGGAGCTGCAGGCTGTCAAGTCCAAGAAGCACATCCCGATCCAGGTCATCCTGGCAACCGGAAGGAGCCTGACCATCTCTGTGGACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CAA 90 bp CCAGGAGGGGCACTCAGGCGTGCTGAGAAGGGGGTAGAAGGCCAGCGTGGAAGGTGCTCGTTGGCAAAGTaGATGCAGAGTTGCTCAAAG +
Preference number: 5 (lower is better)
Translates to: PGGALRRAEKGVEGQRGRCSLAK*MQSCSK
Trigger: CTTTGAGCAACTCTGCATCAACTTTGCCAACGAGCA...CCTTCCACGCTGGCCTTCTACCCCCTTCTCAGCACGCCTGAGTGCCCCTCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CAA 90 bp AGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGGGGGCTCAGGAAGGACTaGTTGTTGGCATGGATACTG +
Preference number: 5 (lower is better)
Translates to: RLETLLGLCRKHPGGALRGLRKD*LLAWIL
Trigger: CAGTATCCATGCCAACAACAAGTCCTTCCTGAGCCC...CCTGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CAA 90 bp GAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGATGGAGTCTGATGACTaGAAGAGCTGGCTTCCTGCC +
Preference number: 5 (lower is better)
Translates to: EAGDLAWPLQETPRRGTQMESDD*KSWLPA
Trigger: GGCAGGAAGCCAGCTCTTCAAGTCATCAGACTCCAT...CTGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CAA 90 bp TGTGAGGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCATGGGAAAACCTGACTaGCGGATGTGCACAGTCTCC +
Preference number: 5 (lower is better)
Translates to: CEEAGDLAWPLQETPRRGMGKPD*RMCTVS
Trigger: GGAGACTGTGCACATCCGCAAGTCAGGTTTTCCCAT...GCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCCTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CAA 90 bp CGTGCTGAGAAGGGGGTAGAAGGCCAGCGTGGAAGGCTTGTGTGCAGATGGGACCCGACTTTCCAGTCTTaGTCTGTCCCCAGGCATAGG +
Preference number: 5 (lower is better)
Translates to: RAEKGVEGQRGRLVCRWDPTFQS*SVPRHR
Trigger: CCTATGCCTGGGGACAGACAAAGACTGGAAAGTCGG...GTCCCATCTGCACACAAGCCTTCCACGCTGGCCTTCTACCCCCTTCTCAGCACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CAA 90 bp GAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGCTCATGGACCGCAACTaGAGCCTTTGGTTCCTTAGC +
Preference number: 5 (lower is better)
Translates to: EAGDLAWPLQETPRRGTQLMDRN*SLWFLS
Trigger: GCTAAGGAACCAAAGGCTCAAGTTGCGGTCCATGAG...CTGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CAA 90 bp CGTGCTGAGAAGGGGGTAGAAGGCCAGCGTGGAAGGCTTGTGTGCAGATGGGACATCGGGATGTGCTTCTaGGACTTGACAGCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: RAEKGVEGQRGRLVCRWDIGMCF*DLTACS
Trigger: GCTGCAGGCTGTCAAGTCCAAGAAGCACATCCCGAT...GTCCCATCTGCACACAAGCCTTCCACGCTGGCCTTCTACCCCCTTCTCAGCACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CAA 90 bp CCAGGAGGGGCACTCAGGCGTGCTGAGAAGGGGGTAGAAGGCCAGCGTGGAAGGGCCACTGTCTTGCGCTaGTTTTTGTCACATTCCAGA +
Preference number: 5 (lower is better)
Translates to: PGGALRRAEKGVEGQRGRATVLR*FLSHSR
Trigger: TCTGGAATGTGACAAAAACAAGCGCAAGACAGTGGC...CCTTCCACGCTGGCCTTCTACCCCCTTCTCAGCACGCCTGAGTGCCCCTCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS TCA 90 bp TCCGGGCGATGGCCTGCAGGCGTTCAAAGCCCACTAGGATCAGCTTaGAATTCTTTCTTTGGCTATAGCCTCGCCACCCTGCCTGGAGGG +
Preference number: 5 (lower is better)
Translates to: SGRWPAGVQSPLGSA*NSFFGYSLATLPGG
Trigger: CCCTCCAGGCAGGGTGGCGAGGCTATAGCCAAAGAAAGAATTTCAAGCTGATCCTAGTGGGCTTTGAACGCCTGCAGGCCATCGCCCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS TCA 90 bp CAGTCGAGAGCCAGCGGCTTCTTCTTCCGGGAGTCTATGAACTTCTaGGCGTGGGGCAGCAATGTCTTCCCAGGTGGGAAGAGACCTGTG +
Preference number: 5 (lower is better)
Translates to: QSRASGFFFRESMNF*AWGSNVFPGGKRPV
Trigger: CACAGGTCTCTTCCCACCTGGGAAGACATTGCTGCCCCACGCTCAGAAGTTCATAGACTCCCGGAAGAAGAAGCCGCTGGCTCTCGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CCA 90 bp TCTGTGATCTTGATGAAGAGGCTGCAGCCATCCCAGGAGGCCAGCTaGAGCCTGGTGCCTATGCCCTCACATAGGTCTCTCACCCGACTA +
Preference number: 5 (lower is better)
Translates to: SVILMKRLQPSQEAS*SLVPMPSHRSLTRL
Trigger: TAGTCGGGTGAGAGACCTATGTGAGGGCATAGGCACCAGGCTCCAGCTGGCCTCCTGGGATGGCTGCAGCCTCTTCATCAAGATCACAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CAA 90 bp GGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCACCCAGTTTTGTTTCTTaGACAATGCCCCCAATGGCC +
Preference number: 5 (lower is better)
Translates to: GGWRPCLASAGNTQEGHSPSFVS*TMPPMA
Trigger: GGCCATTGGGGGCATTGTCAAAGAAACAAAACTGGG...TGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CAA 90 bp CGTGCTGAGAAGGGGGTAGAAGGCCAGCGTGGAAGGCTTGTGTGCAGATGGGACGTGCTTCACGAAGAATaGCTGAAGGTGCTCGTTGGC +
Preference number: 5 (lower is better)
Translates to: RAEKGVEGQRGRLVCRWDVLHEE*LKVLVG
Trigger: GCCAACGAGCACCTTCAGCAATTCTTCGTGAAGCAC...GTCCCATCTGCACACAAGCCTTCCACGCTGGCCTTCTACCCCCTTCTCAGCACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CAA 90 bp GGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGCCTCTGCCACTGTCTaGCGCTTGTTTTTGTCACAT +
Preference number: 5 (lower is better)
Translates to: GGWRPCLASAGNTQEGHSASATV*RLFLSH
Trigger: ATGTGACAAAAACAAGCGCAAGACAGTGGCAGAGGC...TGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CAA 90 bp GAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGTTCAAGAACTCCACTTaGGCCTCTGCCACTGTCTTG +
Preference number: 5 (lower is better)
Translates to: EAGDLAWPLQETPRRGTQFKNST*ASATVL
Trigger: CAAGACAGTGGCAGAGGCCAAAGTGGAGTTCTTGAA...CTGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS TCA 90 bp AGTGACACTGTCCTTGCCCAGTTTGTCATGGATCTGCCGCATCACTaGGCTGCCAGTCAGGCTGTTCCTGCCATAGACCACTGGCTCTGG +
Preference number: 5 (lower is better)
Translates to: SDTVLAQFVMDLPHH*AASQAVPAIDHWLW
Trigger: CCAGAGCCAGTGGTCTATGGCAGGAACAGCCTGACTGGCAGCTCAGTGATGCGGCAGATCCATGACAAACTGGGCAAGGACAGTGTCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS GCA 90 bp CACTGTCCTTGCCCAGTTTGTCATGGATCTGCCGCATCACTGAGCTaGCAGTCAGGCTGTTCCTGCCATAGACCACTGGCTCTGGAAGGT +
Preference number: 5 (lower is better)
Translates to: HCPCPVCHGSAASLS*QSGCSCHRPLALEG
Trigger: ACCTTCCAGAGCCAGTGGTCTATGGCAGGAACAGCCTGACTGGCAGCTCAGTGATGCGGCAGATCCATGACAAACTGGGCAAGGACAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CCA 90 bp CAGTTGGTCAGGATTCTCATCAGCTGGTCCAGAGACTGCTTGAACTaGCTCGCGAGGGTGACGGGGCGCTTGATGGAGTCTGATGACTTG +
Preference number: 5 (lower is better)
Translates to: QLVRILISWSRDCLN*LARVTGRLMESDDL
Trigger: CAAGTCATCAGACTCCATCAAGCGCCCCGTCACCCTCGCGAGCCAGTTCAAGCAGTCTCTGGACCAGCTGATGAGAATCCTGACCAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CCA 90 bp GATCCTCAAAGCGTGTTGGGGCTGGACCCTCCTGACCTCCAATCATaGCTGGGAGGAAGCCAAACACTTTCTCCACCATCGCTGTGTCAG +
Preference number: 5 (lower is better)
Translates to: DPQSVLGLDPPDLQS*LGGSQTLSPPSLCQ
Trigger: CTGACACAGCGATGGTGGAGAAAGTGTTTGGCTTCCTCCCAGCCATGATTGGAGGTCAGGAGGGTCCAGCCCCAACACGCTTTGAGGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CCA 90 bp ACTTCTCTGGAGACTTGGTCCGGTACAGTTTGGAGGGAACACAGCTaGGCAACAGCTCCTGGACAGCGTTACTCTTCACCGTGGCCCCAA +
Preference number: 5 (lower is better)
Translates to: TSLETWSGTVWREHS*ATAPGQRYSSPWPQ
Trigger: TTGGGGCCACGGTGAAGAGTAACGCTGTCCAGGAGCTGTTGCCCAGCTGTGTTCCCTCCAAACTGTACCGGACCAAGTCTCCAGAGAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CAA 90 bp TGTGAGGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCCAGCACTGGTCCCTCTaGTTCTTCTTCATGTTGAAG +
Preference number: 5 (lower is better)
Translates to: CEEAGDLAWPLQETPRRGQHWSL*FFFMLK
Trigger: CTTCAACATGAAGAAGAACAAGAGGGACCAGTGCTG...GCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCCTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CAA 90 bp GTGAGGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGGAAGGACTTGTaGTTGGCATGGATACTGTTC +
Preference number: 5 (lower is better)
Translates to: VRRLETLLGLCRKHPGGALRKDL*LAWILF
Trigger: GAACAGTATCCATGCCAACAACAAGTCCTTCCTGAG...TGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CAA 90 bp TGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGGCGTGCTGAGAAGGCTTGAAATTCTTTCTTaGGCTATAGCCTCGCCACCC +
Preference number: 5 (lower is better)
Translates to: CLASAGNTQEGHSGVLRRLEILS*AIASPP
Trigger: GGGTGGCGAGGCTATAGCCAAAGAAAGAATTTCAAG...CCTTCTCAGCACGCCTGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CAA 90 bp GAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGATAGCTGGGTGGCCCTaGACTAATGAAATTCAGCAG +
Preference number: 5 (lower is better)
Translates to: EAGDLAWPLQETPRRGTQIAGWP*TNEIQQ
Trigger: CTGCTGAATTTCATTAGTCAAGGGCCACCCAGCTAT...CTGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CAA 90 bp TGTGAGGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACCTCATGGTGTAATTaGGAGACATTCTGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: CEEAGDLAWPLQETPRRGTSWCN*ETFCSA
Trigger: GGCTGAGCAGAATGTCTCCAAATTACACCATGAGGT...GCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCCTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS GCA 90 bp AGGATGTGCAGCTCCCCATGGTCAGGTAATGGTACTCAGAGGGCATaGCCAGACTCAGCATTTGCTTCTCTTCCGGGCTCATCCCCATCA +
Preference number: 5 (lower is better)
Translates to: RMCSSPWSGNGTQRA*PDSAFASLPGSSPS
Trigger: TGATGGGGATGAGCCCGGAAGAGAAGCAAATGCTGAGTCTGGGCATGCCCTCTGAGTACCATTACCTGACCATGGGGAGCTGCACATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS GCA 90 bp TTTCTGTTGCCAGTAGCTCTTCCGGACAACCATGCCCCTGGCATGTaGTTGAATGATCACCACTGCCCTCCTCTTGGCCTGGACTTGCTG +
Preference number: 5 (lower is better)
Translates to: FLLPVALPDNHAPGM*LNDHHCPPLGLDLL
Trigger: CAGCAAGTCCAGGCCAAGAGGAGGGCAGTGGTGATCATTCAAGCACATGCCAGGGGCATGGTTGTCCGGAAGAGCTACTGGCAACAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS GCA 90 bp CACAGATCTCTCCTTCAAGCCTCCCAAGAACAAGGCCACCATCTCTaGAATAGCCACGCTGCTGGGGGAGACGAACTCGTACTCTTCCTG +
Preference number: 5 (lower is better)
Translates to: HRSLLQASQEQGHHL*NSHAAGGDELVLFL
Trigger: CAGGAAGAGTACGAGTTCGTCTCCCCCAGCAGCGTGGCTATTGCAGAGATGGTGGCCTTGTTCTTGGGAGGCTTGAAGGAGAGATCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CCA 90 bp CGCCCGCGAAGTGTGCGATCCCAAATCGGGTGTCATGGATGCTCCTaGGGCTCAGGAAGGACTTGTTGTTGGCATGGATACTGTTCAGTT +
Preference number: 5 (lower is better)
Translates to: RPRSVRSQIGCHGCS*GSGRTCCWHGYCSV
Trigger: AACTGAACAGTATCCATGCCAACAACAAGTCCTTCCTGAGCCCCAGGAGCATCCATGACACCCGATTTGGGATCGCACACTTCGCGGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CCA 90 bp TTGATGGAGTCTGATGACTTGAAGAGCTGGCTTCCTGCCTTCACCTaGCAGATGGTGCCGTGCCCCAGCTTAGTCTGTGATGAGTCCACG +
Preference number: 5 (lower is better)
Translates to: LMESDDLKSWLPAFT*QMVPCPSLVCDEST
Trigger: CGTGGACTCATCACAGACTAAGCTGGGGCACGGCACCATCTGCCAGGTGAAGGCAGGAAGCCAGCTCTTCAAGTCATCAGACTCCATCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CAA 90 bp GTGAGGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCAAGGAAGGACTTGTTGTaGGCATGGATACTGTTCAGT +
Preference number: 5 (lower is better)
Translates to: VRRLETLLGLCRKHPGGARKDLL*AWILFS
Trigger: ACTGAACAGTATCCATGCCAACAACAAGTCCTTCCT...TGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CAA 90 bp GTGAGGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCATCCTTCAGGAAGATTTaGGTCTTTCCGACTTTCCAG +
Preference number: 5 (lower is better)
Translates to: VRRLETLLGLCRKHPGGASFRKI*VFPTFQ
Trigger: CTGGAAAGTCGGAAAGACCAAAATCTTCCTGAAGGA...TGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CAA 90 bp GGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAATAGGGCCATCAAACTaGAATGCCTCTTCACCAAAG +
Preference number: 5 (lower is better)
Translates to: GGWRPCLASAGNTQEGHSIGPSN*NASSPK
Trigger: CTTTGGTGAAGAGGCATTCAAGTTTGATGGCCCTAT...TGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS TCA 90 bp GTCTTTACTTCCAGATCCTCAAAGCGTGTTGGGGCTGGACCCTCCTaGCCTCCAATCATGGCTGGGAGGAAGCCAAACACTTTCTCCACC +
Preference number: 5 (lower is better)
Translates to: VFTSRSSKRVGAGPS*PPIMAGRKPNTFST
Trigger: GGTGGAGAAAGTGTTTGGCTTCCTCCCAGCCATGATTGGAGGTCAGGAGGGTCCAGCCCCAACACGCTTTGAGGATCTGGAAGTAAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS TCA 90 bp AGACAGGCAGTAGGCACCAGCCCTGTCTTGCCAGTTCTGTCATTCTaGCCCAGAGCCCAGTTCTCTGAGGCCAACAGTCCTTGTTTCTTG +
Preference number: 5 (lower is better)
Translates to: RQAVGTSPVLPVLSF*PRAQFSEANSPCFL
Trigger: CAAGAAACAAGGACTGTTGGCCTCAGAGAACTGGGCTCTGGGTCAGAATGACAGAACTGGCAAGACAGGGCTGGTGCCTACTGCCTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS GCA 90 bp ATACATCGCCCGCGAAGTGTGCGATCCCAAATCGGGTGTCATGGATaGTCCTGGGGCTCAGGAAGGACTTGTTGTTGGCATGGATACTGT +
Preference number: 5 (lower is better)
Translates to: IHRPRSVRSQIGCHG*SWGSGRTCCWHGYC
Trigger: ACAGTATCCATGCCAACAACAAGTCCTTCCTGAGCCCCAGGAGCATCCATGACACCCGATTTGGGATCGCACACTTCGCGGGCGATGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS GCA 90 bp ATGGCCTGGAACTGTCTCATCAGCAGGTGGCTCCGGGCGATGGCCTaGAGGCGTTCAAAGCCCACTAGGATCAGCTTGAAATTCTTTCTT +
Preference number: 5 (lower is better)
Translates to: MAWNCLISRWLRAMA*RRSKPTRISLKFFL
Trigger: AAGAAAGAATTTCAAGCTGATCCTAGTGGGCTTTGAACGCCTGCAGGCCATCGCCCGGAGCCACCTGCTGATGAGACAGTTCCAGGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS GCA 90 bp GTTGCTCACACTGGGCCACAGCATCCATCAAATGGTCACAGCCGCTaGCCAAGGACCAGAACTTATCATATACAGCGACCTGGAGGGAGA +
Preference number: 5 (lower is better)
Translates to: VAHTGPQHPSNGHSR*PRTRTYHIQRPGGR
Trigger: TCTCCCTCCAGGTCGCTGTATATGATAAGTTCTGGTCCTTGGGCAGCGGCTGTGACCATTTGATGGATGCTGTGGCCCAGTGTGAGCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CCA 90 bp AGAAGATGTGGTAGTTGCGTTCCTCTGGAGCCTGCCGGCAGACTCTaGACTTCTCCAGGAGGAAGTGTTCAATGCTTGCGCCCTCAATCA +
Preference number: 5 (lower is better)
Translates to: RRCGSCVPLEPAGRL*TSPGGSVQCLRPQS
Trigger: TGATTGAGGGCGCAAGCATTGAACACTTCCTCCTGGAGAAGTCCAGAGTCTGCCGGCAGGCTCCAGAGGAACGCAACTACCACATCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CCA 90 bp GGATGGCATCTTCCCGGGAGCACTTGTGAAACCCGCGGAGGTACTTaGGTAGTTCCTGGTGGTAATGGAGTATGGTGTCTGCATTCACGT +
Preference number: 5 (lower is better)
Translates to: GWHLPGSTCETRGGT*VVPGGNGVWCLHSR
Trigger: ACGTGAATGCAGACACCATACTCCATTACCACCAGGAACTACCCAAGTACCTCCGCGGGTTTCACAAGTGCTCCCGGGAAGATGCCATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CAA 90 bp TGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGGCGTGCTGAGAAGGGTGAAGATCGCAGCATaGATTTTCTTGACAATCCAC +
Preference number: 5 (lower is better)
Translates to: CLASAGNTQEGHSGVLRRVKIAA*IFLTIH
Trigger: GTGGATTGTCAAGAAAATCAATGCTGCGATCTTCAC...CCTTCTCAGCACGCCTGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CAA 90 bp GTGAGGAGGCTGGAGACCTTGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACCCACTAGGATCAGCTaGAAATTCTTTCTTTGGCTA +
Preference number: 5 (lower is better)
Translates to: VRRLETLLGLCRKHPGGAPTRIS*KFFLWL
Trigger: TAGCCAAAGAAAGAATTTCAAGCTGATCCTAGTGGG...TGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCAAGGTCTCCAGCCTCCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS TCA 90 bp GAGGAGTGGGTATCGAAGGGGCTTCTGGATGTGGGTGTGGCTGGCTaGCTTCTGGAAGTAAGTCACAGCAAACTTGGGGAAGGTATACTC +
Preference number: 5 (lower is better)
Translates to: EEWVSKGLLDVGVAG*LLEVSHSKLGEGIL
Trigger: GAGTATACCTTCCCCAAGTTTGCTGTGACTTACTTCCAGAAGTCAGCCAGCCACACCCACATCCAGAAGCCCCTTCGATACCCACTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CCA 90 bp CCAAGGACAGGGATTGTGTGTTTGATCAAACAGTCTCGGAGAGCCTaGTGCTGCACCTCTAGCAACTTCATTGCCAAGGGGAAGGCTGGA +
Preference number: 5 (lower is better)
Translates to: PRTGIVCLIKQSRRA*CCTSSNFIAKGKAG
Trigger: TCCAGCCTTCCCCTTGGCAATGAAGTTGCTAGAGGTGCAGCACCAGGCTCTCCGAGACTGTTTGATCAAACACACAATCCCTGTCCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CCA 90 bp AAGTTTCTGGGTCTTTACTTCCAGATCCTCAAAGCGTGTTGGGGCTaGACCCTCCTGACCTCCAATCATGGCTGGGAGGAAGCCAAACAC +
Preference number: 5 (lower is better)
Translates to: KFLGLYFQILKACWG*TLLTSNHGWEEAKH
Trigger: GTGTTTGGCTTCCTCCCAGCCATGATTGGAGGTCAGGAGGGTCCAGCCCCAACACGCTTTGAGGATCTGGAAGTAAAGACCCAGAAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CCA 90 bp GGTAGAGGAGTGGGTATCGAAGGGGCTTCTGGATGTGGGTGTGGCTaGCTGACTTCTGGAAGTAAGTCACAGCAAACTTGGGGAAGGTAT +
Preference number: 5 (lower is better)
Translates to: GRGVGIEGASGCGCG*LTSGSKSQQTWGRY
Trigger: ATACCTTCCCCAAGTTTGCTGTGACTTACTTCCAGAAGTCAGCCAGCCACACCCACATCCAGAAGCCCCTTCGATACCCACTCCTCTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CCA 90 bp TGCCCTCACATAGGTCTCTCACCCGACTACTGCTGCCCACTTCCATaGACTTGCTGGTGTCATTGGGGAGGTAGACCTCATGGTGTAATT +
Preference number: 5 (lower is better)
Translates to: CPHIGLSPDYCCPLP*TCWCHWGGRPHGVI
Trigger: AATTACACCATGAGGTCTACCTCCCCAATGACACCAGCAAGTCCATGGAAGTGGGCAGCAGTAGTCGGGTGAGAGACCTATGTGAGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CAA 90 bp AGGTGCATTTTTATTGCAGATTCAGGGGAGTTACCCACCATCTGTGAGGAGGCTTTGGGGATCCTGGGCTaGGGGAGTGAAGATCGCAGC +
Preference number: 5 (lower is better)
Translates to: RCIFIADSGELPTICEEALGILG*GSEDRS
Trigger: GCTGCGATCTTCACTCCCCAAGCCCAGGATCCCCAA...AGCCTCCTCACAGATGGTGGGTAACTCCCCTGAATCTGCAATAAAAATGCACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CAA 90 bp AGGTGCATTTTTATTGCAGATTCAGGGGAGTTACCCACCATCTGTGAGGAGGCTTGGTCCAGAGACTGCTaGAACTGGCTCGCGAGGGTG +
Preference number: 5 (lower is better)
Translates to: RCIFIADSGELPTICEEAWSRDC*NWLARV
Trigger: CACCCTCGCGAGCCAGTTCAAGCAGTCTCTGGACCA...AGCCTCCTCACAGATGGTGGGTAACTCCCCTGAATCTGCAATAAAAATGCACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CAA 90 bp AGGTGCATTTTTATTGCAGATTCAGGGGAGTTACCCACCATCTGTGAGGAGGCTAAAACCAGCTGCGTCTaGGGAAGGCGGGGACCAGAG +
Preference number: 5 (lower is better)
Translates to: RCIFIADSGELPTICEEAKTSCV*GRRGPE
Trigger: CTCTGGTCCCCGCCTTCCCAAGACGCAGCTGGTTTT...AGCCTCCTCACAGATGGTGGGTAACTCCCCTGAATCTGCAATAAAAATGCACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS TCA 90 bp TGCCCTCGTCATCCTCAATCAAGGTCTTTCCCAGTTTTGTTTCTTTaGCAATGCCCCCAATGGCCACACCAGTCTTGCTGCTGGAGGGAG +
Preference number: 5 (lower is better)
Translates to: CPRHPQSRSFPVLFL*QCPQWPHQSCCWRE
Trigger: CTCCCTCCAGCAGCAAGACTGGTGTGGCCATTGGGGGCATTGTCAAAGAAACAAAACTGGGAAAGACCTTGATTGAGGATGACGAGGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS TCA 90 bp TCACAGGCCTGGAGACAAACTCTCCAAGGACAGGGATTGTGTGTTTaGTCAAACAGTCTCGGAGAGCCTGGTGCTGCACCTCTAGCAACT +
Preference number: 5 (lower is better)
Translates to: SQAWRQTLQGQGLCV*SNSLGEPGAAPLAT
Trigger: AGTTGCTAGAGGTGCAGCACCAGGCTCTCCGAGACTGTTTGATCAAACACACAATCCCTGTCCTTGGAGAGTTTGTCTCCAGGCCTGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS TCA 90 bp TGGCTGGGAGGAAGCCAAACACTTTCTCCACCATCGCTGTGTCAGTaGCAGTGTCATAGATGGACTTACGCTTCCTCTCATGGACCGCAA +
Preference number: 5 (lower is better)
Translates to: WLGGSQTLSPPSLCQ*QCHRWTYASSHGPQ
Trigger: TTGCGGTCCATGAGAGGAAGCGTAAGTCCATCTATGACACTGTCACTGACACAGCGATGGTGGAGAAAGTGTTTGGCTTCCTCCCAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS TCA 90 bp ACTTATCATATACAGCGACCTGGAGGGAGAAGCCCAGATTGTCCCTaGGACCCTGTTTCTGAGCGACGTGCTGGCAGATTTCTCGTGATG +
Preference number: 5 (lower is better)
Translates to: TYHIQRPGGRSPDCP*DPVSERRAGRFLVM
Trigger: CATCACGAGAAATCTGCCAGCACGTCGCTCAGAAACAGGGTCTCAGGGACAATCTGGGCTTCTCCCTCCAGGTCGCTGTATATGATAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS GCA 90 bp ACAGGGATTGTGTGTTTGATCAAACAGTCTCGGAGAGCCTGGTGCTaGACCTCTAGCAACTTCATTGCCAAGGGGAAGGCTGGAGTTTCC +
Preference number: 5 (lower is better)
Translates to: TGIVCLIKQSRRAWC*TSSNFIAKGKAGVS
Trigger: GGAAACTCCAGCCTTCCCCTTGGCAATGAAGTTGCTAGAGGTGCAGCACCAGGCTCTCCGAGACTGTTTGATCAAACACACAATCCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS GCA 90 bp AGGACAGGGATTGTGTGTTTGATCAAACAGTCTCGGAGAGCCTGGTaGTGCACCTCTAGCAACTTCATTGCCAAGGGGAAGGCTGGAGTT +
Preference number: 5 (lower is better)
Translates to: RTGIVCLIKQSRRAW*CTSSNFIAKGKAGV
Trigger: AACTCCAGCCTTCCCCTTGGCAATGAAGTTGCTAGAGGTGCAGCACCAGGCTCTCCGAGACTGTTTGATCAAACACACAATCCCTGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CCA 90 bp GCAGCACACGGAATCTCTGTGAGAACTCATCAAATGTGTAGCGGATaGGAAAACCTGACTTGCGGATGTGCACAGTCTCCATCATGCCGG +
Preference number: 5 (lower is better)
Translates to: AAHGISVRTHQMCSG*ENLTCGCAQSPSCR
Trigger: CCGGCATGATGGAGACTGTGCACATCCGCAAGTCAGGTTTTCCCATCCGCTACACATTTGATGAGTTCTCACAGAGATTCCGTGTGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CCA 90 bp GAAGGTGCGTTGCAGCCGTTCAGCACAGAAGGGCCCATAGCTGGGTaGCCCTTGACTAATGAAATTCAGCAGATACTTCATGAACCTCTC +
Preference number: 5 (lower is better)
Translates to: EGALQPFSTEGPIAG*PLTNEIQQILHEPL
Trigger: GAGAGGTTCATGAAGTATCTGCTGAATTTCATTAGTCAAGGGCCACCCAGCTATGGGCCCTTCTGTGCTGAACGGCTGCAACGCACCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CCA 90 bp AGGACCTTTGAGACACTAGCCAGTTGCGAGCTGTCACTACCAAACTaGATTTTACAGATGAGACCTCCCAGGTGGATGGCATCTTCCCGG +
Preference number: 5 (lower is better)
Translates to: RTFETLASCELSLPN*ILQMRPPRWMASSR
Trigger: CCGGGAAGATGCCATCCACCTGGGAGGTCTCATCTGTAAAATCCAGTTTGGTAGTGACAGCTCGCAACTGGCTAGTGTCTCAAAGGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CAA 90 bp TGCTTGGCCTCTGCAGGAAACACCCAGGAGGGGCACTCAGGCGTGCTGAGAAGGAGTTGCTCAAAGCTATaGTTCTGGAAGTTTTCAAAG +
Preference number: 5 (lower is better)
Translates to: CLASAGNTQEGHSGVLRRSCSKL*FWKFSK
Trigger: CTTTGAAAACTTCCAGAACAATAGCTTTGAGCAACT...CCTTCTCAGCACGCCTGAGTGCCCCTCCTGGGTGTTTCCTGCAGAGGCCAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CAA 90 bp AGGTGCATTTTTATTGCAGATTCAGGGGAGTTACCCACCATCTGTGAGGAGGCTGCCCCTGGCATGTGCTaGAATGATCACCACTGCCCT +
Preference number: 5 (lower is better)
Translates to: RCIFIADSGELPTICEEAAPGMC*NDHHCP
Trigger: AGGGCAGTGGTGATCATTCAAGCACATGCCAGGGGC...AGCCTCCTCACAGATGGTGGGTAACTCCCCTGAATCTGCAATAAAAATGCACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS TCA 90 bp AAACTTGAATGCCTCTTCACCAAAGTTCAGCTGGCTGGCCACCTGTaGGGATCTGTTGTGCTGAGTGACACTGTCCTTGCCCAGTTTGTC +
Preference number: 5 (lower is better)
Translates to: KLECLFTKVQLAGHL*GSVVLSDTVLAQFV
Trigger: GACAAACTGGGCAAGGACAGTGTCACTCAGCACAACAGATCCTCACAGGTGGCCAGCCAGCTGAACTTTGGTGAAGAGGCATTCAAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS TCA 90 bp CATCAGGCGTGTGAGGTTCTGAGGTACCAGCTCCTTCAGGACCTTTaGGACACTAGCCAGTTGCGAGCTGTCACTACCAAACTGGATTTT +
Preference number: 5 (lower is better)
Translates to: HQACEVLRYQLLQDL*DTSQLRAVTTKLDF
Trigger: AAAATCCAGTTTGGTAGTGACAGCTCGCAACTGGCTAGTGTCTCAAAGGTCCTGAAGGAGCTGGTACCTCAGAACCTCACACGCCTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS TCA 90 bp AGGCTCTTTTTCCATTCTTCTGAGGACATCAGGCGTGTGAGGTTCTaGGGTACCAGCTCCTTCAGGACCTTTGAGACACTAGCCAGTTGC +
Preference number: 5 (lower is better)
Translates to: RLFFHSSEDIRRVRF*GTSSFRTFETLASC
Trigger: GCAACTGGCTAGTGTCTCAAAGGTCCTGAAGGAGCTGGTACCTCAGAACCTCACACGCCTGATGTCCTCAGAAGAATGGAAAAAGAGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS GCA 90 bp GATATCTGTGCTCAGCACATCTCGATTCTTCTCCAGAAAGCCTTCTaGCTGGTAGTATACATCGCCCGCGAAGTGTGCGATCCCAAATCG +
Preference number: 5 (lower is better)
Translates to: DICAQHISILLQKAF*LVVYIAREVCDPKS
Trigger: CGATTTGGGATCGCACACTTCGCGGGCGATGTATACTACCAGGCAGAAGGCTTTCTGGAGAAGAATCGAGATGTGCTGAGCACAGATATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS GCA 90 bp GGTGGGCCACCTGTACATGTACTTCAAGAACTCCACTTTGGCCTCTaGCACTGTCTTGCGCTTGTTTTTGTCACATTCCAGAAGGAGGCT +
Preference number: 5 (lower is better)
Translates to: GGPPVHVLQELHFGL*HCLALVFVTFQKEA
Trigger: AGCCTCCTTCTGGAATGTGACAAAAACAAGCGCAAGACAGTGGCAGAGGCCAAAGTGGAGTTCTTGAAGTACATGTACAGGTGGCCCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CCA 90 bp GTGTCATGGATGCTCCTGGGGCTCAGGAAGGACTTGTTGTTGGCATaGATACTGTTCAGTTTCTGCAGCATAGTGACATCTGTCCCCTGT +
Preference number: 5 (lower is better)
Translates to: VSWMLLGLRKDLLLA*ILFSFCSIVTSVPC
Trigger: ACAGGGGACAGATGTCACTATGCTGCAGAAACTGAACAGTATCCATGCCAACAACAAGTCCTTCCTGAGCCCCAGGAGCATCCATGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CCA 90 bp TGGACTTGCTGGTGTCATTGGGGAGGTAGACCTCATGGTGTAATTTaGAGACATTCTGCTCAGCCGCTTTCACCTCTACATCATGTGGGG +
Preference number: 5 (lower is better)
Translates to: WTCWCHWGGRPHGVI*RHSAQPLSPLHHVG
Trigger: CCCCACATGATGTAGAGGTGAAAGCGGCTGAGCAGAATGTCTCCAAATTACACCATGAGGTCTACCTCCCCAATGACACCAGCAAGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CCA 90 bp ATAGGTCTCTCACCCGACTACTGCTGCCCACTTCCATGGACTTGCTaGTGTCATTGGGGAGGTAGACCTCATGGTGTAATTTGGAGACAT +
Preference number: 5 (lower is better)
Translates to: IGLSPDYCCPLPWTC*CHWGGRPHGVIWRH
Trigger: ATGTCTCCAAATTACACCATGAGGTCTACCTCCCCAATGACACCAGCAAGTCCATGGAAGTGGGCAGCAGTAGTCGGGTGAGAGACCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CAA 90 bp AGGTGCATTTTTATTGCAGATTCAGGGGAGTTACCCACCATCTGTGAGGAGGCTTGGACCCAGTGTTCCTaGCCCTCGTCATCCTCAATC +
Preference number: 5 (lower is better)
Translates to: RCIFIADSGELPTICEEAWTQCS*PSSSSI
Trigger: GATTGAGGATGACGAGGGCAAGGAACACTGGGTCCA...AGCCTCCTCACAGATGGTGGGTAACTCCCCTGAATCTGCAATAAAAATGCACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CAA 90 bp AGGTGCATTTTTATTGCAGATTCAGGGGAGTTACCCACCATCTGTGAGGAGGCTATGGCTGCCAGCAGCTaGCTGATGTCCCAGTTCTCT +
Preference number: 5 (lower is better)
Translates to: RCIFIADSGELPTICEEAMAASS*LMSQFS
Trigger: AGAGAACTGGGACATCAGCAAGCTGCTGGCAGCCAT...AGCCTCCTCACAGATGGTGGGTAACTCCCCTGAATCTGCAATAAAAATGCACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CAA 90 bp AGGTGCATTTTTATTGCAGATTCAGGGGAGTTACCCACCATCTGTGAGGAGGCTCCTCTAGCAACTTCATaGCCAAGGGGAAGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: RCIFIADSGELPTICEEAPLATS*PRGRLE
Trigger: CTCCAGCCTTCCCCTTGGCAATGAAGTTGCTAGAGG...AGCCTCCTCACAGATGGTGGGTAACTCCCCTGAATCTGCAATAAAAATGCACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CAA 90 bp AGGTGCATTTTTATTGCAGATTCAGGGGAGTTACCCACCATCTGTGAGGAGGCTATGTGCTTCTTGGACTaGACAGCCTGCAGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: RCIFIADSGELPTICEEAMCFLD*TACSSS
Trigger: GCTGGAGCTGCAGGCTGTCAAGTCCAAGAAGCACAT...AGCCTCCTCACAGATGGTGGGTAACTCCCCTGAATCTGCAATAAAAATGCACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CAA 90 bp AGGTGCATTTTTATTGCAGATTCAGGGGAGTTACCCACCATCTGTGAGGAGGCTAGGGAGAAGCCCAGATaGTCCCTGAGACCCTGTTTC +
Preference number: 5 (lower is better)
Translates to: RCIFIADSGELPTICEEAREKPR*SLRPCF
Trigger: GAAACAGGGTCTCAGGGACAATCTGGGCTTCTCCCT...AGCCTCCTCACAGATGGTGGGTAACTCCCCTGAATCTGCAATAAAAATGCACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CAA 90 bp AGGTGCATTTTTATTGCAGATTCAGGGGAGTTACCCACCATCTGTGAGGAGGCTAGCAGCTCCTTGGTCTaGGGGTGGATGAGCAGTAAC +
Preference number: 5 (lower is better)
Translates to: RCIFIADSGELPTICEEASSSLV*GWMSSN
Trigger: GTTACTGCTCATCCACCCCAAGACCAAGGAGCTGCT...AGCCTCCTCACAGATGGTGGGTAACTCCCCTGAATCTGCAATAAAAATGCACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CCA 90 bp TGCGGATCTCCAGCACTGTGTCCTGATGATCCTTCAGGAAGATTTTaGTCTTTCCGACTTTCCAGTCTTTGTCTGTCCCCAGGCATAGGT +
Preference number: 5 (lower is better)
Translates to: CGSPALCPDDPSGRF*SFRLSSLCLSPGIG
Trigger: ACCTATGCCTGGGGACAGACAAAGACTGGAAAGTCGGAAAGACCAAAATCTTCCTGAAGGATCATCAGGACACAGTGCTGGAGATCCGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CAA 90 bp AGGTGCATTTTTATTGCAGATTCAGGGGAGTTACCCACCATCTGTGAGGAGGCTGCGGCTGTAGTAGATTaGTACCTGCTCCAGGGTGTA +
Preference number: 5 (lower is better)
Translates to: RCIFIADSGELPTICEEAAAVVD*YLLQGV
Trigger: TACACCCTGGAGCAGGTACAAATCTACTACAGCCGC...AGCCTCCTCACAGATGGTGGGTAACTCCCCTGAATCTGCAATAAAAATGCACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CAA 90 bp AGGTGCATTTTTATTGCAGATTCAGGGGAGTTACCCACCATCTGTGAGGAGGCTAGTAACCCATGTCGGTaGATGGCGATGAGGAGAATG +
Preference number: 5 (lower is better)
Translates to: RCIFIADSGELPTICEEASNPCR*MAMRRM
Trigger: CATTCTCCTCATCGCCATCAACCGACATGGGTTACT...AGCCTCCTCACAGATGGTGGGTAACTCCCCTGAATCTGCAATAAAAATGCACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CAA 90 bp AGGTGCATTTTTATTGCAGATTCAGGGGAGTTACCCACCATCTGTGAGGAGGCTGTCTTGCGCTTGTTTTaGTCACATTCCAGAAGGAGG +
Preference number: 5 (lower is better)
Translates to: RCIFIADSGELPTICEEAVLRLF*SHSRRR
Trigger: CCTCCTTCTGGAATGTGACAAAAACAAGCGCAAGAC...AGCCTCCTCACAGATGGTGGGTAACTCCCCTGAATCTGCAATAAAAATGCACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS-3UTR CAA 90 bp AGGTGCATTTTTATTGCAGATTCAGGGGAGTTACCCACCATCTGTGAGGAGGCTGCAGCATTGATTTTCTaGACAATCCACTGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: RCIFIADSGELPTICEEAAALIF*TIHWKR
Trigger: CCTCTTCCAGTGGATTGTCAAGAAAATCAATGCTGC...AGCCTCCTCACAGATGGTGGGTAACTCCCCTGAATCTGCAATAAAAATGCACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS GCA 90 bp TGTACATGTACTTCAAGAACTCCACTTTGGCCTCTGCCACTGTCTTaGGCTTGTTTTTGTCACATTCCAGAAGGAGGCTCTTTTTCCATT +
Preference number: 5 (lower is better)
Translates to: CTCTSRTPLWPLPLS*ACFCHIPEGGSFSI
Trigger: AATGGAAAAAGAGCCTCCTTCTGGAATGTGACAAAAACAAGCGCAAGACAGTGGCAGAGGCCAAAGTGGAGTTCTTGAAGTACATGTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS GCA 90 bp TCAGAAACTTGTTTTTCGAGGAATGAATCAGGATTAGGATATCTGTaGTCAGCACATCTCGATTCTTCTCCAGAAAGCCTTCTGCCTGGT +
Preference number: 5 (lower is better)
Translates to: SETCFSRNESGLGYL*SAHLDSSPESLLPG
Trigger: ACCAGGCAGAAGGCTTTCTGGAGAAGAATCGAGATGTGCTGAGCACAGATATCCTAATCCTGATTCATTCCTCGAAAAACAAGTTTCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS TCA 90 bp GAGTCCACGTTAAATATCTCCTTCAGAAACTTGTTTTTCGAGGAATaGATCAGGATTAGGATATCTGTGCTCAGCACATCTCGATTCTTC +
Preference number: 5 (lower is better)
Translates to: ESTLNISFRNLFFEE*IRIRISVLSTSRFF
Trigger: GAAGAATCGAGATGTGCTGAGCACAGATATCCTAATCCTGATTCATTCCTCGAAAAACAAGTTTCTGAAGGAGATATTTAACGTGGACTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CCA 72 bp GTGGACAGATTTGAGCAGTGGCTGGCGCAGCGGCTCTaGGGAGTAGGCCCAGAGATGACCCCGGCTTCGGGC +
Preference number: 6 (lower is better)
Translates to: VDRFEQWLAQRL*GVGPEMTPASG
Trigger: GCCCGAAGCCGGGGTCATCTCTGGGCCTACTCCCCAGAGCCGCTGCGCCAGCCACTGCTCAAATCTGTCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS TCA 72 bp TGGCCGAGCGGACGTGTGCGTAGTCCTTGGCATCGCTaGGCCCCTCGGAGGATGTGCAGCTCCCCATGGTCA +
Preference number: 6 (lower is better)
Translates to: WPSGRVRSPWHR*APRRMCSSPWS
Trigger: TGACCATGGGGAGCTGCACATCCTCCGAGGGGCTCAGCGATGCCAAGGACTACGCACACGTCCGCTCGGCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CCA 72 bp CTCTGTCGCATGGCCTGGAACTGTCTCATCAGCAGGTaGCTCCGGGCGATGGCCTGCAGGCGTTCAAAGCCC +
Preference number: 6 (lower is better)
Translates to: LCRMAWNCLISR*LRAMACRRSKP
Trigger: GGGCTTTGAACGCCTGCAGGCCATCGCCCGGAGCCACCTGCTGATGAGACAGTTCCAGGCCATGCGACAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CCA 72 bp CGGGCCTGCAGCTGCACTATCCTCTGTCGCATGGCCTaGAACTGTCTCATCAGCAGGTGGCTCCGGGCGATG +
Preference number: 6 (lower is better)
Translates to: RACSCTILCRMA*NCLISRWLRAM
Trigger: CATCGCCCGGAGCCACCTGCTGATGAGACAGTTCCAGGCCATGCGACAGAGGATAGTGCAGCTGCAGGCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CCA 72 bp GGTGTATGGCGACTCTGTGAGCTGATCCTCCAGTGGTaGCTCCAGAGCCCGCACCTCCTGGGCTGCCAGCTT +
Preference number: 6 (lower is better)
Translates to: GVWRLCELILQW*LQSPHLLGCQL
Trigger: AAGCTGGCAGCCCAGGAGGTGCGGGCTCTGGAGCCACCACTGGAGGATCAGCTCACAGAGTCGCCATACACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CAA 90 bp GGCATGTGCTTGAATGATCACCACTGCCCTCCTCTTGGCCTGGACTaGCTGTCGCACCAGGTAGCCCCTGCATCGGGCCTGCAGCTGCAC +
Preference number: 6 (lower is better)
Translates to: GMCLNDHHCPPLGLD*LSHQVAPASGLQLH
Trigger: GTGCAGCTGCAGGCCCGATGCAGGGGCTACCTGGTGCGACAGCAAGTCCAGGCCAAGAGGAGGGCAGTGGTGATCATTCAAGCACATGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS GCA 72 bp TCTTGGCCTGGACTTGCTGTCGCACCAGGTAGCCCCTaGATCGGGCCTGCAGCTGCACTATCCTCTGTCGCA +
Preference number: 6 (lower is better)
Translates to: SWPGLAVAPGSP*IGPAAALSSVA
Trigger: TGCGACAGAGGATAGTGCAGCTGCAGGCCCGATGCAGGGGCTACCTGGTGCGACAGCAAGTCCAGGCCAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS GCA 72 bp AGCCATCCCAGGAGGCCAGCTGGAGCCTGGTGCCTATaGCCTCACATAGGTCTCTCACCCGACTACTGCTGC +
Preference number: 6 (lower is better)
Translates to: SHPRRPAGAWCL*PHIGLSPDYCC
Trigger: GCAGCAGTAGTCGGGTGAGAGACCTATGTGAGGGCATAGGCACCAGGCTCCAGCTGGCCTCCTGGGATGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CCA 72 bp TGGGCAACAGCTCCTGGACAGCGTTACTCTTCACCGTaGCCCCAAGCTGCACATAGCAGTGCCGGGCCAGCA +
Preference number: 6 (lower is better)
Translates to: WATAPGQRYSSP*PQAAHSSAGPA
Trigger: TGCTGGCCCGGCACTGCTATGTGCAGCTTGGGGCCACGGTGAAGAGTAACGCTGTCCAGGAGCTGTTGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CCA 72 bp GCCACGCTGCTGGGGGAGACGAACTCGTACTCTTCCTaGAGTGTGGCGAGAAGCAGCTTCTTCCCTCCTGGG +
Preference number: 6 (lower is better)
Translates to: ATLLGETNSYSS*SVARSSFFPPG
Trigger: CCCAGGAGGGAAGAAGCTGCTTCTCGCCACACTCCAGGAAGAGTACGAGTTCGTCTCCCCCAGCAGCGTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CAA 72 bp CCGGTTGCCAGGATGACCTGGATCGGGATGTGCTTCTaGGACTTGACAGCCTGCAGCTCCAGCCAGGTGGGG +
Preference number: 6 (lower is better)
Translates to: PVARMTWIGMCF*DLTACSSSQVG
Trigger: CCCCACCTGGCTGGAGCTGCAGGCTGTCAAGTCCAAGAAGCACATCCCGATCCAGGTCATCCTGGCAACCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CAA 72 bp GCCAGTGGCGTGGCTTTCGACTGGGTATACTGGGCCTaGGCATGGGCAGCGGTGACAAGGCTAGCCCACTTC +
Preference number: 6 (lower is better)
Translates to: ASGVAFDWVYWA*AWAAVTRLAHF
Trigger: GAAGTGGGCTAGCCTTGTCACCGCTGCCCATGCCAAGGCCCAGTATACCCAGTCGAAAGCCACGCCACTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CAA 90 bp AGGGTCACAGCTGCACGTCTCTGCCTCAGGAACTCCTTCCTGTACTaGTGTCCCCGGAGGACTCTCTGGATCCGGATCGCTGCTCCGTCC +
Preference number: 6 (lower is better)
Translates to: RVTAARLCLRNSFLY*CPRRTLWIRIAAPS
Trigger: GGACGGAGCAGCGATCCGGATCCAGAGAGTCCTCCGGGGACACAAGTACAGGAAGGAGTTCCTGAGGCAGAGACGTGCAGCTGTGACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS TCA 72 bp TGCTCACAGGGTCCTCCTGGGAGTCATGCCAGGGGGTaGAGAACTCCTTCCGGAAGTAGATACGCCAGGGGG +
Preference number: 6 (lower is better)
Translates to: CSQGPPGSHARG*RTPSGSRYARG
Trigger: CCCCCTGGCGTATCTACTTCCGGAAGGAGTTCTTCACCCCCTGGCATGACTCCCAGGAGGACCCTGTGAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS TCA 72 bp CTGCATCCCGCAGTTTGGCTTTGTCGTGGACAGATTTaGGCAGTGGCTGGCGCAGCGGCTCTGGGGAGTAGG +
Preference number: 6 (lower is better)
Translates to: LHPAVWLCRGQI*AVAGAAALGSR
Trigger: CCTACTCCCCAGAGCCGCTGCGCCAGCCACTGCTCAAATCTGTCCACGACAAAGCCAAACTGCGGGATGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS TCA 72 bp CCTCCCAGGTGGATGGCATCTTCCCGGGAGCACTTGTaGAACCCGCGGAGGTACTTGGGTAGTTCCTGGTGG +
Preference number: 6 (lower is better)
Translates to: PPRWMASSREHL*NPRRYLGSSWW
Trigger: CCACCAGGAACTACCCAAGTACCTCCGCGGGTTTCACAAGTGCTCCCGGGAAGATGCCATCCACCTGGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CCA 72 bp CCTGGAACTGTCTCATCAGCAGGTGGCTCCGGGCGATaGCCTGCAGGCGTTCAAAGCCCACTAGGATCAGCT +
Preference number: 6 (lower is better)
Translates to: PGTVSSAGGSGR*PAGVQSPLGSA
Trigger: AGCTGATCCTAGTGGGCTTTGAACGCCTGCAGGCCATCGCCCGGAGCCACCTGCTGATGAGACAGTTCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CCA 72 bp GGCGTGGCTTTCGACTGGGTATACTGGGCCTTGGCATaGGCAGCGGTGACAAGGCTAGCCCACTTCTCTGGA +
Preference number: 6 (lower is better)
Translates to: GVAFDWVYWALA*AAVTRLAHFSG
Trigger: TCCAGAGAAGTGGGCTAGCCTTGTCACCGCTGCCCATGCCAAGGCCCAGTATACCCAGTCGAAAGCCACGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CAA 72 bp GGGAGGCAGCTCGCCCATGTGGCGGCTGTAGTAGATTaGTACCTGCTCCAGGGTGTACAGGGGCAGCATCTG +
Preference number: 6 (lower is better)
Translates to: GRQLAHVAAVVD*YLLQGVQGQHL
Trigger: CAGATGCTGCCCCTGTACACCCTGGAGCAGGTACAAATCTACTACAGCCGCCACATGGGCGAGCTGCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CAA 72 bp TTGAATGATCACCACTGCCCTCCTCTTGGCCTGGACTaGCTGTCGCACCAGGTAGCCCCTGCATCGGGCCTG +
Preference number: 6 (lower is better)
Translates to: LNDHHCPPLGLD*LSHQVAPASGL
Trigger: CAGGCCCGATGCAGGGGCTACCTGGTGCGACAGCAAGTCCAGGCCAAGAGGAGGGCAGTGGTGATCATTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CAA 90 bp AGGATGGCAAGGAAGATCTGGCAGGCTGCATCCCGCAGTTTGGCTTaGTCGTGGACAGATTTGAGCAGTGGCTGGCGCAGCGGCTCTGGG +
Preference number: 6 (lower is better)
Translates to: RMARKIWQAASRSLA*SWTDLSSGWRSGSG
Trigger: CCCAGAGCCGCTGCGCCAGCCACTGCTCAAATCTGTCCACGACAAAGCCAAACTGCGGGATGCAGCCTGCCAGATCTTCCTTGCCATCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS TCA 72 bp CGCCAGACCACACCCCACGGAGGACTTGGTGGTAAATaGGCTCAGTGCTCACAGGGTCCTCCTGGGAGTCAT +
Preference number: 6 (lower is better)
Translates to: RQTTPHGGLGGK*AQCSQGPPGSH
Trigger: ATGACTCCCAGGAGGACCCTGTGAGCACTGAGCTCATTTACCACCAAGTCCTCCGTGGGGTGTGGTCTGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS TCA 72 bp GCCAGGACTGGCGGGAAGGGTAGTCACCTGTGTACTTaGGGATGGCAAGGAAGATCTGGCAGGCTGCATCCC +
Preference number: 6 (lower is better)
Translates to: ARTGGKGSHLCT*GWQGRSGRLHP
Trigger: GGGATGCAGCCTGCCAGATCTTCCTTGCCATCCTCAAGTACACAGGTGACTACCCTTCCCGCCAGTCCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS GCA 72 bp CAGTTGGTCAGGATTCTCATCAGCTGGTCCAGAGACTaGTTGAACTGGCTCGCGAGGGTGACGGGGCGCTTG +
Preference number: 6 (lower is better)
Translates to: QLVRILISWSRD*LNWLARVTGRL
Trigger: CAAGCGCCCCGTCACCCTCGCGAGCCAGTTCAAGCAGTCTCTGGACCAGCTGATGAGAATCCTGACCAACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS GCA 72 bp GCTATAGCCTCGCCACCCTGCCTGGAGGGTCACAGCTaGACGTCTCTGCCTCAGGAACTCCTTCCTGTACTT +
Preference number: 6 (lower is better)
Translates to: AIASPPCLEGHS*TSLPQELLPVL
Trigger: AAGTACAGGAAGGAGTTCCTGAGGCAGAGACGTGCAGCTGTGACCCTCCAGGCAGGGTGGCGAGGCTATAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS GCA 72 bp CTCCTTCCGGTTGCCAGGATGACCTGGATCGGGATGTaGTTCTTGGACTTGACAGCCTGCAGCTCCAGCCAG +
Preference number: 6 (lower is better)
Translates to: LLPVARMTWIGM*FLDLTACSSSQ
Trigger: CTGGCTGGAGCTGCAGGCTGTCAAGTCCAAGAAGCACATCCCGATCCAGGTCATCCTGGCAACCGGAAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS GCA 72 bp GGCGGAGTCCACAGAGATGGTCAGGCTCCTTCCGGTTaGCAGGATGACCTGGATCGGGATGTGCTTCTTGGA +
Preference number: 6 (lower is better)
Translates to: GGVHRDGQAPSG*QDDLDRDVLLG
Trigger: TCCAAGAAGCACATCCCGATCCAGGTCATCCTGGCAACCGGAAGGAGCCTGACCATCTCTGTGGACTCCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS GCA 72 bp GGGGCAGCAATGTCTTCCCAGGTGGGAAGAGACCTGTaGAGAGCCAGAGTAGCTGCCAAGCTCGCTCTTCAC +
Preference number: 6 (lower is better)
Translates to: GAAMSSQVGRDL*RARVAAKLALH
Trigger: GTGAAGAGCGAGCTTGGCAGCTACTCTGGCTCTGCACAGGTCTCTTCCCACCTGGGAAGACATTGCTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CCA 72 bp ATCTGGCAGGCTGCATCCCGCAGTTTGGCTTTGTCGTaGACAGATTTGAGCAGTGGCTGGCGCAGCGGCTCT +
Preference number: 6 (lower is better)
Translates to: IWQAASRSLALS*TDLSSGWRSGS
Trigger: AGAGCCGCTGCGCCAGCCACTGCTCAAATCTGTCCACGACAAAGCCAAACTGCGGGATGCAGCCTGCCAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CCA 72 bp TTGATGAAGAGGCTGCAGCCATCCCAGGAGGCCAGCTaGAGCCTGGTGCCTATGCCCTCACATAGGTCTCTC +
Preference number: 6 (lower is better)
Translates to: LMKRLQPSQEAS*SLVPMPSHRSL
Trigger: GAGAGACCTATGTGAGGGCATAGGCACCAGGCTCCAGCTGGCCTCCTGGGATGGCTGCAGCCTCTTCATCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CAA 72 bp GCGAGGGTGACGGGGCGCTTGATGGAGTCTGATGACTaGAAGAGCTGGCTTCCTGCCTTCACCTGGCAGATG +
Preference number: 6 (lower is better)
Translates to: ARVTGRLMESDD*KSWLPAFTWQM
Trigger: CATCTGCCAGGTGAAGGCAGGAAGCCAGCTCTTCAAGTCATCAGACTCCATCAAGCGCCCCGTCACCCTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CAA 72 bp GGGTTGGCCGGGGCGGGAGCCCTGAAGCCCCGCTGTTaGTTCACTGTATTCAGGAGCTGCTGTACATATGAG +
Preference number: 6 (lower is better)
Translates to: GLAGAGALKPRC*FTVFRSCCTYE
Trigger: CTCATATGTACAGCAGCTCCTGAATACAGTGAACAAACAGCGGGGCTTCAGGGCTCCCGCCCCGGCCAACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CAA 90 bp TGGTCCAGAGACTGCTTGAACTGGCTCGCGAGGGTGACGGGGCGCTaGATGGAGTCTGATGACTTGAAGAGCTGGCTTCCTGCCTTCACC +
Preference number: 6 (lower is better)
Translates to: WSRDCLNWLARVTGR*MESDDLKSWLPAFT
Trigger: GGTGAAGGCAGGAAGCCAGCTCTTCAAGTCATCAGACTCCATCAAGCGCCCCGTCACCCTCGCGAGCCAGTTCAAGCAGTCTCTGGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CAA 90 bp GGCTGGCAGTTGGTCAGGATTCTCATCAGCTGGTCCAGAGACTGCTaGAACTGGCTCGCGAGGGTGACGGGGCGCTTGATGGAGTCTGAT +
Preference number: 6 (lower is better)
Translates to: GWQLVRILISWSRDC*NWLARVTGRLMESD
Trigger: ATCAGACTCCATCAAGCGCCCCGTCACCCTCGCGAGCCAGTTCAAGCAGTCTCTGGACCAGCTGATGAGAATCCTGACCAACTGCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CAA 90 bp TTGGCATGGGCAGCGGTGACAAGGCTAGCCCACTTCTCTGGAGACTaGGTCCGGTACAGTTTGGAGGGAACACAGCTGGGCAACAGCTCC +
Preference number: 6 (lower is better)
Translates to: LAWAAVTRLAHFSGD*VRYSLEGTQLGNSS
Trigger: GGAGCTGTTGCCCAGCTGTGTTCCCTCCAAACTGTACCGGACCAAGTCTCCAGAGAAGTGGGCTAGCCTTGTCACCGCTGCCCATGCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CAA 90 bp CTGTTGCCAGTAGCTCTTCCGGACAACCATGCCCCTGGCATGTGCTaGAATGATCACCACTGCCCTCCTCTTGGCCTGGACTTGCTGTCG +
Preference number: 6 (lower is better)
Translates to: LLPVALPDNHAPGMC*NDHHCPPLGLDLLS
Trigger: CGACAGCAAGTCCAGGCCAAGAGGAGGGCAGTGGTGATCATTCAAGCACATGCCAGGGGCATGGTTGTCCGGAAGAGCTACTGGCAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CAA 90 bp TACTTGAGGATGGCAAGGAAGATCTGGCAGGCTGCATCCCGCAGTTaGGCTTTGTCGTGGACAGATTTGAGCAGTGGCTGGCGCAGCGGC +
Preference number: 6 (lower is better)
Translates to: YLRMARKIWQAASRS*ALSWTDLSSGWRSG
Trigger: GCCGCTGCGCCAGCCACTGCTCAAATCTGTCCACGACAAAGCCAAACTGCGGGATGCAGCCTGCCAGATCTTCCTTGCCATCCTCAAGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS TCA 72 bp GCCAGCGGCTTCTTCTTCCGGGAGTCTATGAACTTCTaGGCGTGGGGCAGCAATGTCTTCCCAGGTGGGAAG +
Preference number: 6 (lower is better)
Translates to: ASGFFFRESMNF*AWGSNVFPGGK
Trigger: CTTCCCACCTGGGAAGACATTGCTGCCCCACGCTCAGAAGTTCATAGACTCCCGGAAGAAGAAGCCGCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS GCA 72 bp AACCATGCCCCTGGCATGTGCTTGAATGATCACCACTaGCCTCCTCTTGGCCTGGACTTGCTGTCGCACCAG +
Preference number: 6 (lower is better)
Translates to: NHAPGMCLNDHH*PPLGLDLLSHQ
Trigger: CTGGTGCGACAGCAAGTCCAGGCCAAGAGGAGGGCAGTGGTGATCATTCAAGCACATGCCAGGGGCATGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS GCA 72 bp CCAGTAGCTCTTCCGGACAACCATGCCCCTGGCATGTaGTTGAATGATCACCACTGCCCTCCTCTTGGCCTG +
Preference number: 6 (lower is better)
Translates to: PVALPDNHAPGM*LNDHHCPPLGL
Trigger: CAGGCCAAGAGGAGGGCAGTGGTGATCATTCAAGCACATGCCAGGGGCATGGTTGTCCGGAAGAGCTACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CCA 72 bp GGGTGCATAGGCCTGAGGGTGCTGAGGTCTTCTGCATaGACCCAGTGTTCCTTGCCCTCGTCATCCTCAATC +
Preference number: 6 (lower is better)
Translates to: GCIGLRVLRSSA*TQCSLPSSSSI
Trigger: GATTGAGGATGACGAGGGCAAGGAACACTGGGTCCATGCAGAAGACCTCAGCACCCTCAGGCCTATGCACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CCA 72 bp GGTAGTTGCGTTCCTCTGGAGCCTGCCGGCAGACTCTaGACTTCTCCAGGAGGAAGTGTTCAATGCTTGCGC +
Preference number: 6 (lower is better)
Translates to: GSCVPLEPAGRL*TSPGGSVQCLR
Trigger: GCGCAAGCATTGAACACTTCCTCCTGGAGAAGTCCAGAGTCTGCCGGCAGGCTCCAGAGGAACGCAACTACC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CCA 72 bp CCCAGTTCTCTGAGTCTGAGAACTGGAGGATCTTCATaGCCGAGCGGACGTGTGCGTAGTCCTTGGCATCGC +
Preference number: 6 (lower is better)
Translates to: PSSLSLRTGGSS*PSGRVRSPWHR
Trigger: GCGATGCCAAGGACTACGCACACGTCCGCTCGGCCATGAAGATCCTCCAGTTCTCAGACTCAGAGAACTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CCA 72 bp TCGCCCGCGAAGTGTGCGATCCCAAATCGGGTGTCATaGATGCTCCTGGGGCTCAGGAAGGACTTGTTGTTG +
Preference number: 6 (lower is better)
Translates to: SPAKCAIPNRVS*MLLGLRKDLLL
Trigger: CAACAACAAGTCCTTCCTGAGCCCCAGGAGCATCCATGACACCCGATTTGGGATCGCACACTTCGCGGGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CCA 72 bp AGGATTCTCATCAGCTGGTCCAGAGACTGCTTGAACTaGCTCGCGAGGGTGACGGGGCGCTTGATGGAGTCT +
Preference number: 6 (lower is better)
Translates to: RILISWSRDCLN*LARVTGRLMES
Trigger: AGACTCCATCAAGCGCCCCGTCACCCTCGCGAGCCAGTTCAAGCAGTCTCTGGACCAGCTGATGAGAATCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CCA 72 bp GGCGGGGCTTGTTCTGAAACTGCATACGCTCCGGGCTaGGCAGCAGCACACGGAATCTCTGTGAGAACTCAT +
Preference number: 6 (lower is better)
Translates to: GGACSETAYAPG*AAAHGISVRTH
Trigger: ATGAGTTCTCACAGAGATTCCGTGTGCTGCTGCCCAGCCCGGAGCGTATGCAGTTTCAGAACAAGCCCCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CCA 72 bp TACAGTTTGGAGGGAACACAGCTGGGCAACAGCTCCTaGACAGCGTTACTCTTCACCGTGGCCCCAAGCTGC +
Preference number: 6 (lower is better)
Translates to: YSLEGTQLGNSS*TALLFTVAPSC
Trigger: GCAGCTTGGGGCCACGGTGAAGAGTAACGCTGTCCAGGAGCTGTTGCCCAGCTGTGTTCCCTCCAAACTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CAA 72 bp GACTGCTTGAACTGGCTCGCGAGGGTGACGGGGCGCTaGATGGAGTCTGATGACTTGAAGAGCTGGCTTCCT +
Preference number: 6 (lower is better)
Translates to: DCLNWLARVTGR*MESDDLKSWLP
Trigger: AGGAAGCCAGCTCTTCAAGTCATCAGACTCCATCAAGCGCCCCGTCACCCTCGCGAGCCAGTTCAAGCAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CAA 72 bp TTGGTCAGGATTCTCATCAGCTGGTCCAGAGACTGCTaGAACTGGCTCGCGAGGGTGACGGGGCGCTTGATG +
Preference number: 6 (lower is better)
Translates to: LVRILISWSRDC*NWLARVTGRLM
Trigger: CATCAAGCGCCCCGTCACCCTCGCGAGCCAGTTCAAGCAGTCTCTGGACCAGCTGATGAGAATCCTGACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CAA 72 bp GTAGCTCTTCCGGACAACCATGCCCCTGGCATGTGCTaGAATGATCACCACTGCCCTCCTCTTGGCCTGGAC +
Preference number: 6 (lower is better)
Translates to: VALPDNHAPGMC*NDHHCPPLGLD
Trigger: GTCCAGGCCAAGAGGAGGGCAGTGGTGATCATTCAAGCACATGCCAGGGGCATGGTTGTCCGGAAGAGCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CAA 72 bp AGGAAGATCTGGCAGGCTGCATCCCGCAGTTTGGCTTaGTCGTGGACAGATTTGAGCAGTGGCTGGCGCAGC +
Preference number: 6 (lower is better)
Translates to: RKIWQAASRSLA*SWTDLSSGWRS
Trigger: GCTGCGCCAGCCACTGCTCAAATCTGTCCACGACAAAGCCAAACTGCGGGATGCAGCCTGCCAGATCTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CAA 90 bp GTGACAAGGCTAGCCCACTTCTCTGGAGACTTGGTCCGGTACAGTTaGGAGGGAACACAGCTGGGCAACAGCTCCTGGACAGCGTTACTC +
Preference number: 6 (lower is better)
Translates to: VTRLAHFSGDLVRYS*EGTQLGNSSWTALL
Trigger: GAGTAACGCTGTCCAGGAGCTGTTGCCCAGCTGTGTTCCCTCCAAACTGTACCGGACCAAGTCTCCAGAGAAGTGGGCTAGCCTTGTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS TCA 72 bp TCTTCCGGACAACCATGCCCCTGGCATGTGCTTGAATaGTCACCACTGCCCTCCTCTTGGCCTGGACTTGCT +
Preference number: 6 (lower is better)
Translates to: SSGQPCPWHVLE*SPLPSSWPGLA
Trigger: AGCAAGTCCAGGCCAAGAGGAGGGCAGTGGTGATCATTCAAGCACATGCCAGGGGCATGGTTGTCCGGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS TCA 72 bp TCCAGATCCTCAAAGCGTGTTGGGGCTGGACCCTCCTaGCCTCCAATCATGGCTGGGAGGAAGCCAAACACT +
Preference number: 6 (lower is better)
Translates to: SRSSKRVGAGPS*PPIMAGRKPNT
Trigger: AGTGTTTGGCTTCCTCCCAGCCATGATTGGAGGTCAGGAGGGTCCAGCCCCAACACGCTTTGAGGATCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS TCA 72 bp GTCCTTGCCCAGTTTGTCATGGATCTGCCGCATCACTaGGCTGCCAGTCAGGCTGTTCCTGCCATAGACCAC +
Preference number: 6 (lower is better)
Translates to: VLAQFVMDLPHH*AASQAVPAIDH
Trigger: GTGGTCTATGGCAGGAACAGCCTGACTGGCAGCTCAGTGATGCGGCAGATCCATGACAAACTGGGCAAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS GCA 72 bp CCGCGAAGTGTGCGATCCCAAATCGGGTGTCATGGATaGTCCTGGGGCTCAGGAAGGACTTGTTGTTGGCAT +
Preference number: 6 (lower is better)
Translates to: PRSVRSQIGCHG*SWGSGRTCCWH
Trigger: ATGCCAACAACAAGTCCTTCCTGAGCCCCAGGAGCATCCATGACACCCGATTTGGGATCGCACACTTCGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS GCA 72 bp TGCCCAGTTTGTCATGGATCTGCCGCATCACTGAGCTaGCAGTCAGGCTGTTCCTGCCATAGACCACTGGCT +
Preference number: 6 (lower is better)
Translates to: CPVCHGSAASLS*QSGCSCHRPLA
Trigger: AGCCAGTGGTCTATGGCAGGAACAGCCTGACTGGCAGCTCAGTGATGCGGCAGATCCATGACAAACTGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS GCA 72 bp CTCCTTCAAGCCTCCCAAGAACAAGGCCACCATCTCTaGAATAGCCACGCTGCTGGGGGAGACGAACTCGTA +
Preference number: 6 (lower is better)
Translates to: LLQASQEQGHHL*NSHAAGGDELV
Trigger: TACGAGTTCGTCTCCCCCAGCAGCGTGGCTATTGCAGAGATGGTGGCCTTGTTCTTGGGAGGCTTGAAGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CCA 72 bp GAGACTTGGTCCGGTACAGTTTGGAGGGAACACAGCTaGGCAACAGCTCCTGGACAGCGTTACTCTTCACCG +
Preference number: 6 (lower is better)
Translates to: ETWSGTVWREHS*ATAPGQRYSSP
Trigger: CGGTGAAGAGTAACGCTGTCCAGGAGCTGTTGCCCAGCTGTGTTCCCTCCAAACTGTACCGGACCAAGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CAA 72 bp GTTTCTTTGACAATGCCCCCAATGGCCACACCAGTCTaGCTGCTGGAGGGAGGGTCCAGCCACACATGGTCA +
Preference number: 6 (lower is better)
Translates to: VSLTMPPMATPV*LLEGGSSHTWS
Trigger: TGACCATGTGTGGCTGGACCCTCCCTCCAGCAGCAAGACTGGTGTGGCCATTGGGGGCATTGTCAAAGAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CAA 72 bp CTTAGCCAGAATGACCTGAGGCCCAGTGCTTTTCTGTaGCCAGTAGCTCTTCCGGACAACCATGCCCCTGGC +
Preference number: 6 (lower is better)
Translates to: LSQNDLRPSAFL*PVALPDNHAPG
Trigger: GCCAGGGGCATGGTTGTCCGGAAGAGCTACTGGCAACAGAAAAGCACTGGGCCTCAGGTCATTCTGGCTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS TCA 72 bp TGCCTCTTCACCAAAGTTCAGCTGGCTGGCCACCTGTaGGGATCTGTTGTGCTGAGTGACACTGTCCTTGCC +
Preference number: 6 (lower is better)
Translates to: CLFTKVQLAGHL*GSVVLSDTVLA
Trigger: GGCAAGGACAGTGTCACTCAGCACAACAGATCCTCACAGGTGGCCAGCCAGCTGAACTTTGGTGAAGAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS TCA 72 bp ATACAGCGACCTGGAGGGAGAAGCCCAGATTGTCCCTaGGACCCTGTTTCTGAGCGACGTGCTGGCAGATTT +
Preference number: 6 (lower is better)
Translates to: IQRPGGRSPDCP*DPVSERRAGRF
Trigger: AAATCTGCCAGCACGTCGCTCAGAAACAGGGTCTCAGGGACAATCTGGGCTTCTCCCTCCAGGTCGCTGTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS GCA 72 bp AGCTCCCCATGGTCAGGTAATGGTACTCAGAGGGCATaGCCAGACTCAGCATTTGCTTCTCTTCCGGGCTCA +
Preference number: 6 (lower is better)
Translates to: SSPWSGNGTQRA*PDSAFASLPGS
Trigger: TGAGCCCGGAAGAGAAGCAAATGCTGAGTCTGGGCATGCCCTCTGAGTACCATTACCTGACCATGGGGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS GCA 72 bp CTCTCACCCGACTACTGCTGCCCACTTCCATGGACTTaGTGGTGTCATTGGGGAGGTAGACCTCATGGTGTA +
Preference number: 6 (lower is better)
Translates to: LSPDYCCPLPWT*WCHWGGRPHGV
Trigger: TACACCATGAGGTCTACCTCCCCAATGACACCAGCAAGTCCATGGAAGTGGGCAGCAGTAGTCGGGTGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS GCA 72 bp CTATGCCCTCACATAGGTCTCTCACCCGACTACTGCTaGCCACTTCCATGGACTTGCTGGTGTCATTGGGGA +
Preference number: 6 (lower is better)
Translates to: LCPHIGLSPDYC*PLPWTCWCHWG
Trigger: TCCCCAATGACACCAGCAAGTCCATGGAAGTGGGCAGCAGTAGTCGGGTGAGAGACCTATGTGAGGGCATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS GCA 72 bp TGCCTATGCCCTCACATAGGTCTCTCACCCGACTACTaGTGCCCACTTCCATGGACTTGCTGGTGTCATTGG +
Preference number: 6 (lower is better)
Translates to: CLCPHIGLSPDY*CPLPWTCWCHW
Trigger: CCAATGACACCAGCAAGTCCATGGAAGTGGGCAGCAGTAGTCGGGTGAGAGACCTATGTGAGGGCATAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CCA 72 bp TCTGATGACTTGAAGAGCTGGCTTCCTGCCTTCACCTaGCAGATGGTGCCGTGCCCCAGCTTAGTCTGTGAT +
Preference number: 6 (lower is better)
Translates to: SDDLKSWLPAFT*QMVPCPSLVCD
Trigger: ATCACAGACTAAGCTGGGGCACGGCACCATCTGCCAGGTGAAGGCAGGAAGCCAGCTCTTCAAGTCATCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CCA 72 bp GGTCTTTACTTCCAGATCCTCAAAGCGTGTTGGGGCTaGACCCTCCTGACCTCCAATCATGGCTGGGAGGAA +
Preference number: 6 (lower is better)
Translates to: GLYFQILKACWG*TLLTSNHGWEE
Trigger: TTCCTCCCAGCCATGATTGGAGGTCAGGAGGGTCCAGCCCCAACACGCTTTGAGGATCTGGAAGTAAAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CCA 72 bp CTTCCCGGGAGCACTTGTGAAACCCGCGGAGGTACTTaGGTAGTTCCTGGTGGTAATGGAGTATGGTGTCTG +
Preference number: 6 (lower is better)
Translates to: LPGSTCETRGGT*VVPGGNGVWCL
Trigger: CAGACACCATACTCCATTACCACCAGGAACTACCCAAGTACCTCCGCGGGTTTCACAAGTGCTCCCGGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CAA 72 bp ATGGCAAGGAAGATCTGGCAGGCTGCATCCCGCAGTTaGGCTTTGTCGTGGACAGATTTGAGCAGTGGCTGG +
Preference number: 6 (lower is better)
Translates to: MARKIWQAASRS*ALSWTDLSSGW
Trigger: CCAGCCACTGCTCAAATCTGTCCACGACAAAGCCAAACTGCGGGATGCAGCCTGCCAGATCTTCCTTGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS TCA 72 bp TTCAGCTGGCTGGCCACCTGTGAGGATCTGTTGTGCTaGGTGACACTGTCCTTGCCCAGTTTGTCATGGATC +
Preference number: 6 (lower is better)
Translates to: FSWLATCEDLLC*VTLSLPSLSWI
Trigger: GATCCATGACAAACTGGGCAAGGACAGTGTCACTCAGCACAACAGATCCTCACAGGTGGCCAGCCAGCTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS TCA 72 bp GTTGCGAGCTGTCACTACCAAACTGGATTTTACAGATaGGACCTCCCAGGTGGATGGCATCTTCCCGGGAGC +
Preference number: 6 (lower is better)
Translates to: VASCHYQTGFYR*DLPGGWHLPGS
Trigger: GCTCCCGGGAAGATGCCATCCACCTGGGAGGTCTCATCTGTAAAATCCAGTTTGGTAGTGACAGCTCGCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CCA 72 bp AGTGTGCGATCCCAAATCGGGTGTCATGGATGCTCCTaGGGCTCAGGAAGGACTTGTTGTTGGCATGGATAC +
Preference number: 6 (lower is better)
Translates to: SVRSQIGCHGCS*GSGRTCCWHGY
Trigger: GTATCCATGCCAACAACAAGTCCTTCCTGAGCCCCAGGAGCATCCATGACACCCGATTTGGGATCGCACACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CCA 72 bp GAAGGTATACTCAGCCAGGCTGTCCACCTCCTCTTCTaGCATCGCCATCATGGGCACTGTATCCAGATCAAC +
Preference number: 6 (lower is better)
Translates to: EGILSQAVHLLF*HRHHGHCIQIN
Trigger: GTTGATCTGGATACAGTGCCCATGATGGCGATGCCAGAAGAGGAGGTGGACAGCCTGGCTGAGTATACCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CCA 72 bp GGCTGGCTGACTTCTGGAAGTAAGTCACAGCAAACTTaGGGAAGGTATACTCAGCCAGGCTGTCCACCTCCT +
Preference number: 6 (lower is better)
Translates to: GWLTSGSKSQQT*GRYTQPGCPPP
Trigger: AGGAGGTGGACAGCCTGGCTGAGTATACCTTCCCCAAGTTTGCTGTGACTTACTTCCAGAAGTCAGCCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CCA 72 bp ATAGGTCTCTCACCCGACTACTGCTGCCCACTTCCATaGACTTGCTGGTGTCATTGGGGAGGTAGACCTCAT +
Preference number: 6 (lower is better)
Translates to: IGLSPDYCCPLP*TCWCHWGGRPH
Trigger: ATGAGGTCTACCTCCCCAATGACACCAGCAAGTCCATGGAAGTGGGCAGCAGTAGTCGGGTGAGAGACCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CCA 72 bp GGAGGTACTTGGGTAGTTCCTGGTGGTAATGGAGTATaGTGTCTGCATTCACGTCCTTCCCAGGGGTCACGT +
Preference number: 6 (lower is better)
Translates to: GGTWVVPGGNGV*CLHSRPSQGSR
Trigger: ACGTGACCCCTGGGAAGGACGTGAATGCAGACACCATACTCCATTACCACCAGGAACTACCCAAGTACCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CAA 72 bp AGGGTGCTGAGGTCTTCTGCATGGACCCAGTGTTCCTaGCCCTCGTCATCCTCAATCAAGGTCTTTCCCAGT +
Preference number: 6 (lower is better)
Translates to: RVLRSSAWTQCS*PSSSSIKVFPS
Trigger: ACTGGGAAAGACCTTGATTGAGGATGACGAGGGCAAGGAACACTGGGTCCATGCAGAAGACCTCAGCACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CAA 72 bp GTAATGGTACTCAGAGGGCATGCCCAGACTCAGCATTaGCTTCTCTTCCGGGCTCATCCCCATCAGCATGCA +
Preference number: 6 (lower is better)
Translates to: VMVLRGHAQTQH*LLFRAHPHQHA
Trigger: TGCATGCTGATGGGGATGAGCCCGGAAGAGAAGCAAATGCTGAGTCTGGGCATGCCCTCTGAGTACCATTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CAA 72 bp GTTTCTGGGTCTTTACTTCCAGATCCTCAAAGCGTGTaGGGGCTGGACCCTCCTGACCTCCAATCATGGCTG +
Preference number: 6 (lower is better)
Translates to: VSGSLLPDPQSV*GLDPPDLQSWL
Trigger: CAGCCATGATTGGAGGTCAGGAGGGTCCAGCCCCAACACGCTTTGAGGATCTGGAAGTAAAGACCCAGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS TCA 72 bp TGGCCTGCAGGCGTTCAAAGCCCACTAGGATCAGCTTaGAATTCTTTCTTTGGCTATAGCCTCGCCACCCTG +
Preference number: 6 (lower is better)
Translates to: WPAGVQSPLGSA*NSFFGYSLATL
Trigger: CAGGGTGGCGAGGCTATAGCCAAAGAAAGAATTTCAAGCTGATCCTAGTGGGCTTTGAACGCCTGCAGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS TCA 72 bp TCTGCGAAGGACAACCCCAGCAGTGTCCTCTCCTTCTaGTCCAGGAAGTACATCCCCTTCCAGTTAATGGCT +
Preference number: 6 (lower is better)
Translates to: SAKDNPSSVLSF*SRKYIPFQLMA
Trigger: AGCCATTAACTGGAAGGGGATGTACTTCCTGGATCAGAAGGAGAGGACACTGCTGGGGTTGTCCTTCGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS TCA 72 bp GCCAGTTCTGTCATTCTGACCCAGAGCCCAGTTCTCTaGGGCCAACAGTCCTTGTTTCTTGGTCAGGATCAG +
Preference number: 6 (lower is better)
Translates to: ASSVILTQSPVL*GQQSLFLGQDQ
Trigger: CTGATCCTGACCAAGAAACAAGGACTGTTGGCCTCAGAGAACTGGGCTCTGGGTCAGAATGACAGAACTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS GCA 72 bp GTGTGTTTGATCAAACAGTCTCGGAGAGCCTGGTGCTaGACCTCTAGCAACTTCATTGCCAAGGGGAAGGCT +
Preference number: 6 (lower is better)
Translates to: VCLIKQSRRAWC*TSSNFIAKGKA
Trigger: AGCCTTCCCCTTGGCAATGAAGTTGCTAGAGGTGCAGCACCAGGCTCTCCGAGACTGTTTGATCAAACACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS GCA 72 bp ACTGGGCCACAGCATCCATCAAATGGTCACAGCCGCTaGCCAAGGACCAGAACTTATCATATACAGCGACCT +
Preference number: 6 (lower is better)
Translates to: TGPQHPSNGHSR*PRTRTYHIQRP
Trigger: AGGTCGCTGTATATGATAAGTTCTGGTCCTTGGGCAGCGGCTGTGACCATTTGATGGATGCTGTGGCCCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CCA 72 bp CCAGGCTGTCCACCTCCTCTTCTGGCATCGCCATCATaGGCACTGTATCCAGATCAACCTCATGAAGTTTCT +
Preference number: 6 (lower is better)
Translates to: PGCPPPLLASPS*ALYPDQPHEVS
Trigger: AGAAACTTCATGAGGTTGATCTGGATACAGTGCCCATGATGGCGATGCCAGAAGAGGAGGTGGACAGCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CCA 72 bp TCACCCGACTACTGCTGCCCACTTCCATGGACTTGCTaGTGTCATTGGGGAGGTAGACCTCATGGTGTAATT +
Preference number: 6 (lower is better)
Translates to: SPDYCCPLPWTC*CHWGGRPHGVI
Trigger: AATTACACCATGAGGTCTACCTCCCCAATGACACCAGCAAGTCCATGGAAGTGGGCAGCAGTAGTCGGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CAA 90 bp TTCACAGGCCTGGAGACAAACTCTCCAAGGACAGGGATTGTGTGTTaGATCAAACAGTCTCGGAGAGCCTGGTGCTGCACCTCTAGCAAC +
Preference number: 6 (lower is better)
Translates to: FTGLETNSPRTGIVC*IKQSRRAWCCTSSN
Trigger: GTTGCTAGAGGTGCAGCACCAGGCTCTCCGAGACTGTTTGATCAAACACACAATCCCTGTCCTTGGAGAGTTTGTCTCCAGGCCTGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CAA 90 bp TTGCCCTCGTCATCCTCAATCAAGGTCTTTCCCAGTTTTGTTTCTTaGACAATGCCCCCAATGGCCACACCAGTCTTGCTGCTGGAGGGA +
Preference number: 6 (lower is better)
Translates to: LPSSSSIKVFPSFVS*TMPPMATPVLLLEG
Trigger: TCCCTCCAGCAGCAAGACTGGTGTGGCCATTGGGGGCATTGTCAAAGAAACAAAACTGGGAAAGACCTTGATTGAGGATGACGAGGGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CAA 90 bp GCCAACAGTCCTTGTTTCTTGGTCAGGATCAGTAAGTCACCTTTCTaGAAGGGCAGAAGGGTGATATCGTCTGTGGCCCTTCTGTCCTGC +
Preference number: 6 (lower is better)
Translates to: ANSPCFLVRISKSPF*KGRRVISSVALLSC
Trigger: GCAGGACAGAAGGGCCACAGACGATATCACCCTTCTGCCCTTCAAGAAAGGTGACTTACTGATCCTGACCAAGAAACAAGGACTGTTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS TCA 72 bp TGGAGACAAACTCTCCAAGGACAGGGATTGTGTGTTTaGTCAAACAGTCTCGGAGAGCCTGGTGCTGCACCT +
Preference number: 6 (lower is better)
Translates to: WRQTLQGQGLCV*SNSLGEPGAAP
Trigger: AGGTGCAGCACCAGGCTCTCCGAGACTGTTTGATCAAACACACAATCCCTGTCCTTGGAGAGTTTGTCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS TCA 72 bp TGTGAGGTTCTGAGGTACCAGCTCCTTCAGGACCTTTaGGACACTAGCCAGTTGCGAGCTGTCACTACCAAA +
Preference number: 6 (lower is better)
Translates to: CEVLRYQLLQDL*DTSQLRAVTTK
Trigger: TTTGGTAGTGACAGCTCGCAACTGGCTAGTGTCTCAAAGGTCCTGAAGGAGCTGGTACCTCAGAACCTCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS TCA 72 bp GGCTCTTTTTCCATTCTTCTGAGGACATCAGGCGTGTaGGGTTCTGAGGTACCAGCTCCTTCAGGACCTTTG +
Preference number: 6 (lower is better)
Translates to: GSFSILLRTSGV*GSEVPAPSGPL
Trigger: CAAAGGTCCTGAAGGAGCTGGTACCTCAGAACCTCACACGCCTGATGTCCTCAGAAGAATGGAAAAAGAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CCA 72 bp GAGACACTAGCCAGTTGCGAGCTGTCACTACCAAACTaGATTTTACAGATGAGACCTCCCAGGTGGATGGCA +
Preference number: 6 (lower is better)
Translates to: ETLASCELSLPN*ILQMRPPRWMA
Trigger: TGCCATCCACCTGGGAGGTCTCATCTGTAAAATCCAGTTTGGTAGTGACAGCTCGCAACTGGCTAGTGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CAA 90 bp CCAAATCGGGTGTCATGGATGCTCCTGGGGCTCAGGAAGGACTTGTaGTTGGCATGGATACTGTTCAGTTTCTGCAGCATAGTGACATCT +
Preference number: 6 (lower is better)
Translates to: PNRVSWMLLGLRKDL*LAWILFSFCSIVTS
Trigger: AGATGTCACTATGCTGCAGAAACTGAACAGTATCCATGCCAACAACAAGTCCTTCCTGAGCCCCAGGAGCATCCATGACACCCGATTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CAA 90 bp ATCCCAAATCGGGTGTCATGGATGCTCCTGGGGCTCAGGAAGGACTaGTTGTTGGCATGGATACTGTTCAGTTTCTGCAGCATAGTGACA +
Preference number: 6 (lower is better)
Translates to: IPNRVSWMLLGLRKD*LLAWILFSFCSIVT
Trigger: TGTCACTATGCTGCAGAAACTGAACAGTATCCATGCCAACAACAAGTCCTTCCTGAGCCCCAGGAGCATCCATGACACCCGATTTGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CAA 90 bp TTCTCTAGGTTAGACATGGGTCTGTCTGAGATAGGGCCATCAAACTaGAATGCCTCTTCACCAAAGTTCAGCTGGCTGGCCACCTGTGAG +
Preference number: 6 (lower is better)
Translates to: FSRLDMGLSEIGPSN*NASSPKFSWLATCE
Trigger: CTCACAGGTGGCCAGCCAGCTGAACTTTGGTGAAGAGGCATTCAAGTTTGATGGCCCTATCTCAGACAGACCCATGTCTAACCTAGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS TCA 72 bp TTCCATTCTTCTGAGGACATCAGGCGTGTGAGGTTCTaGGGTACCAGCTCCTTCAGGACCTTTGAGACACTA +
Preference number: 6 (lower is better)
Translates to: FHSSEDIRRVRF*GTSSFRTFETL
Trigger: TAGTGTCTCAAAGGTCCTGAAGGAGCTGGTACCTCAGAACCTCACACGCCTGATGTCCTCAGAAGAATGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS GCA 72 bp ATTGTGTGTTTGATCAAACAGTCTCGGAGAGCCTGGTaGTGCACCTCTAGCAACTTCATTGCCAAGGGGAAG +
Preference number: 6 (lower is better)
Translates to: IVCLIKQSRRAW*CTSSNFIAKGK
Trigger: CTTCCCCTTGGCAATGAAGTTGCTAGAGGTGCAGCACCAGGCTCTCCGAGACTGTTTGATCAAACACACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS GCA 72 bp AAGGACTTGTTGTTGGCATGGATACTGTTCAGTTTCTaGAGCATAGTGACATCTGTCCCCTGTGGGAAGCGG +
Preference number: 6 (lower is better)
Translates to: KDLLLAWILFSF*SIVTSVPCGKR
Trigger: CCGCTTCCCACAGGGGACAGATGTCACTATGCTGCAGAAACTGAACAGTATCCATGCCAACAACAAGTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CCA 72 bp TTGCAGCCGTTCAGCACAGAAGGGCCCATAGCTGGGTaGCCCTTGACTAATGAAATTCAGCAGATACTTCAT +
Preference number: 6 (lower is better)
Translates to: LQPFSTEGPIAG*PLTNEIQQILH
Trigger: ATGAAGTATCTGCTGAATTTCATTAGTCAAGGGCCACCCAGCTATGGGCCCTTCTGTGCTGAACGGCTGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CCA 72 bp TACTGCTGCCCACTTCCATGGACTTGCTGGTGTCATTaGGGAGGTAGACCTCATGGTGTAATTTGGAGACAT +
Preference number: 6 (lower is better)
Translates to: YCCPLPWTCWCH*GGRPHGVIWRH
Trigger: ATGTCTCCAAATTACACCATGAGGTCTACCTCCCCAATGACACCAGCAAGTCCATGGAAGTGGGCAGCAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CAA 72 bp TCATGGATGCTCCTGGGGCTCAGGAAGGACTTGTTGTaGGCATGGATACTGTTCAGTTTCTGCAGCATAGTG +
Preference number: 6 (lower is better)
Translates to: SWMLLGLRKDLL*AWILFSFCSIV
Trigger: CACTATGCTGCAGAAACTGAACAGTATCCATGCCAACAACAAGTCCTTCCTGAGCCCCAGGAGCATCCATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CAA 72 bp GTGTCATGGATGCTCCTGGGGCTCAGGAAGGACTTGTaGTTGGCATGGATACTGTTCAGTTTCTGCAGCATA +
Preference number: 6 (lower is better)
Translates to: VSWMLLGLRKDL*LAWILFSFCSI
Trigger: TATGCTGCAGAAACTGAACAGTATCCATGCCAACAACAAGTCCTTCCTGAGCCCCAGGAGCATCCATGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CAA 72 bp AGAGCCCAGTTCTCTGAGGCCAACAGTCCTTGTTTCTaGGTCAGGATCAGTAAGTCACCTTTCTTGAAGGGC +
Preference number: 6 (lower is better)
Translates to: RAQFSEANSPCF*VRISKSPFLKG
Trigger: GCCCTTCAAGAAAGGTGACTTACTGATCCTGACCAAGAAACAAGGACTGTTGGCCTCAGAGAACTGGGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS TCA 72 bp CATCCTCAATCAAGGTCTTTCCCAGTTTTGTTTCTTTaGCAATGCCCCCAATGGCCACACCAGTCTTGCTGC +
Preference number: 6 (lower is better)
Translates to: HPQSRSFPVLFL*QCPQWPHQSCC
Trigger: GCAGCAAGACTGGTGTGGCCATTGGGGGCATTGTCAAAGAAACAAAACTGGGAAAGACCTTGATTGAGGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS TCA 72 bp GGAAGCCAAACACTTTCTCCACCATCGCTGTGTCAGTaGCAGTGTCATAGATGGACTTACGCTTCCTCTCAT +
Preference number: 6 (lower is better)
Translates to: GSQTLSPPSLCQ*QCHRWTYASSH
Trigger: ATGAGAGGAAGCGTAAGTCCATCTATGACACTGTCACTGACACAGCGATGGTGGAGAAAGTGTTTGGCTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS GCA 72 bp ACTCATCAAATGTGTAGCGGATGGGAAAACCTGACTTaGGGATGTGCACAGTCTCCATCATGCCGGAATAAC +
Preference number: 6 (lower is better)
Translates to: THQMCSGWENLT*GCAQSPSCRNN
Trigger: GTTATTCCGGCATGATGGAGACTGTGCACATCCGCAAGTCAGGTTTTCCCATCCGCTACACATTTGATGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS GCA 72 bp ACCAGCTCCTTCAGGACCTTTGAGACACTAGCCAGTTaGGAGCTGTCACTACCAAACTGGATTTTACAGATG +
Preference number: 6 (lower is better)
Translates to: TSSFRTFETLAS*ELSLPNWILQM
Trigger: CATCTGTAAAATCCAGTTTGGTAGTGACAGCTCGCAACTGGCTAGTGTCTCAAAGGTCCTGAAGGAGCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS GCA 72 bp ACTTCAAGAACTCCACTTTGGCCTCTGCCACTGTCTTaGGCTTGTTTTTGTCACATTCCAGAAGGAGGCTCT +
Preference number: 6 (lower is better)
Translates to: TSRTPLWPLPLS*ACFCHIPEGGS
Trigger: AGAGCCTCCTTCTGGAATGTGACAAAAACAAGCGCAAGACAGTGGCAGAGGCCAAAGTGGAGTTCTTGAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CCA 72 bp ATGCTCCTGGGGCTCAGGAAGGACTTGTTGTTGGCATaGATACTGTTCAGTTTCTGCAGCATAGTGACATCT +
Preference number: 6 (lower is better)
Translates to: MLLGLRKDLLLA*ILFSFCSIVTS
Trigger: AGATGTCACTATGCTGCAGAAACTGAACAGTATCCATGCCAACAACAAGTCCTTCCTGAGCCCCAGGAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CCA 72 bp GGAATCTCTGTGAGAACTCATCAAATGTGTAGCGGATaGGAAAACCTGACTTGCGGATGTGCACAGTCTCCA +
Preference number: 6 (lower is better)
Translates to: GISVRTHQMCSG*ENLTCGCAQSP
Trigger: TGGAGACTGTGCACATCCGCAAGTCAGGTTTTCCCATCCGCTACACATTTGATGAGTTCTCACAGAGATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CCA 72 bp CCAGCACTGTGTCCTGATGATCCTTCAGGAAGATTTTaGTCTTTCCGACTTTCCAGTCTTTGTCTGTCCCCA +
Preference number: 6 (lower is better)
Translates to: PALCPDDPSGRF*SFRLSSLCLSP
Trigger: TGGGGACAGACAAAGACTGGAAAGTCGGAAAGACCAAAATCTTCCTGAAGGATCATCAGGACACAGTGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CAA 72 bp TACTTCAAGAACTCCACTTTGGCCTCTGCCACTGTCTaGCGCTTGTTTTTGTCACATTCCAGAAGGAGGCTC +
Preference number: 6 (lower is better)
Translates to: YFKNSTLASATV*RLFLSHSRRRL
Trigger: GAGCCTCCTTCTGGAATGTGACAAAAACAAGCGCAAGACAGTGGCAGAGGCCAAAGTGGAGTTCTTGAAGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS TCA 72 bp CTGTTTGTTCACTGTATTCAGGAGCTGCTGTACATATaGGGTCAGCAGGTCGTCCATCTTGTAACCCAGAGA +
Preference number: 6 (lower is better)
Translates to: LFVHCIQELLYI*GQQVVHLVTQR
Trigger: TCTCTGGGTTACAAGATGGACGACCTGCTGACCTCATATGTACAGCAGCTCCTGAATACAGTGAACAAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS GCA 72 bp CCTGTACATGTACTTCAAGAACTCCACTTTGGCCTCTaGCACTGTCTTGCGCTTGTTTTTGTCACATTCCAG +
Preference number: 6 (lower is better)
Translates to: PVHVLQELHFGL*HCLALVFVTFQ
Trigger: CTGGAATGTGACAAAAACAAGCGCAAGACAGTGGCAGAGGCCAAAGTGGAGTTCTTGAAGTACATGTACAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CAA 72 bp TCATCCTCAATCAAGGTCTTTCCCAGTTTTGTTTCTTaGACAATGCCCCCAATGGCCACACCAGTCTTGCTG +
Preference number: 6 (lower is better)
Translates to: SSSIKVFPSFVS*TMPPMATPVLL
Trigger: CAGCAAGACTGGTGTGGCCATTGGGGGCATTGTCAAAGAAACAAAACTGGGAAAGACCTTGATTGAGGATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS CAA 90 bp CTGTACATGTACTTCAAGAACTCCACTTTGGCCTCTGCCACTGTCTaGCGCTTGTTTTTGTCACATTCCAGAAGGAGGCTCTTTTTCCAT +
Preference number: 6 (lower is better)
Translates to: LYMYFKNSTLASATV*RLFLSHSRRRLFFH
Trigger: ATGGAAAAAGAGCCTCCTTCTGGAATGTGACAAAAACAAGCGCAAGACAGTGGCAGAGGCCAAAGTGGAGTTCTTGAAGTACATGTACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2
CDS GCA 72 bp TGTTTTTCGAGGAATGAATCAGGATTAGGATATCTGTaGTCAGCACATCTCGATTCTTCTCCAGAAAGCCTT +
Preference number: 6 (lower is better)
Translates to: CFSRNESGLGYL*SAHLDSSPESL
Trigger: AAGGCTTTCTGGAGAAGAATCGAGATGTGCTGAGCACAGATATCCTAATCCTGATTCATTCCTCGAAAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000134663.2