RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MYO5C (Mus musculus)

Ensembl gene IDs: ENSMUSG00000033590

Ensembl transcript IDs: ENSMUST00000036555.8, ENSMUST00000216788.2

Found 418 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGCCAGGCCCTCGCATACTTCTGCAGGATCACTGCCTTGTGCTCCTaGAACAACTTCCGGTACCGCCTCCTGGCTAGGAAGCCCCTGGTG +
Preference number: 1 (lower is better)
Translates to: SQALAYFCRITALCS*NNFRYRLLARKPLV
Trigger: CACCAGGGGCTTCCTAGCCAGGAGGCGGTACCGGAAGTTGTTGCAGGAGCACAAGGCAGTGATCCTGCAGAAGTATGCGAGGGCCTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR CCA 90 bp AACTTCCGGTACCGCCTCCTGGCTAGGAAGCCCCTGGTGTGTGCCTaGATGGTGATGGTGGCCACACGGATCAGCTGGTACAGGTTACGG +
Preference number: 1 (lower is better)
Translates to: NFRYRLLARKPLVCA*MVMVATRISWYRLR
Trigger: CCGTAACCTGTACCAGCTGATCCGTGTGGCCACCATCACCATCCAGGCACACACCAGGGGCTTCCTAGCCAGGAGGCGGTACCGGAAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR TCA 90 bp GACCCCGGAAGTACCGTTGGATTGTCAGGGCAGCCTGTCTCTCCCTaGGGAACTTCCTCCTCTGCAGCCAGCCTCGCACGTGTTTCTGGA +
Preference number: 1 (lower is better)
Translates to: DPGSTVGLSGQPVSP*GTSSSAASLARVSG
Trigger: TCCAGAAACACGTGCGAGGCTGGCTGCAGAGGAGGAAGTTCCTCAGGGAGAGACAGGCTGCCCTGACAATCCAACGGTACTTCCGGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR GCA 90 bp ATGTTCTGGAATCTGCGCCGGGCCAGCCAGGCCCTCGCATACTTCTaGAGGATCACTGCCTTGTGCTCCTGCAACAACTTCCGGTACCGC +
Preference number: 1 (lower is better)
Translates to: MFWNLRRASQALAYF*RITALCSCNNFRYR
Trigger: GCGGTACCGGAAGTTGTTGCAGGAGCACAAGGCAGTGATCCTGCAGAAGTATGCGAGGGCCTGGCTGGCCCGGCGCAGATTCCAGAACAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR TCA 90 bp GCCTCCTTCAAAGCAGTGGCAGTGATGGCCTTCCTCACTGTCTGCTaGCCCCGGAAGTACCGTTGGATTGTCAGGGCAGCCTGTCTCTCC +
Preference number: 1 (lower is better)
Translates to: ASFKAVAVMAFLTVC*PRKYRWIVRAACLS
Trigger: GGAGAGACAGGCTGCCCTGACAATCCAACGGTACTTCCGGGGTCAGCAGACAGTGAGGAAGGCCATCACTGCCACTGCTTTGAAGGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR TCA 90 bp CCAGCTTCTTCTGCAAGCGCTGGACCCTGTAAGTCAGCTGAATGTTaGGCACGAACCTGCGGATGTTCTGGAATCTGCGCCGGGCCAGCC +
Preference number: 1 (lower is better)
Translates to: PASSASAGPCKSAEC*ARTCGCSGICAGPA
Trigger: GGCTGGCCCGGCGCAGATTCCAGAACATCCGCAGGTTCGTGCTCAACATTCAGCTGACTTACAGGGTCCAGCGCTTGCAGAAGAAGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR TCA 90 bp TCGCTCTCTCTGCAGCTCCAGCTCTGCATTGTGCTTCTGCAGCTTTaGCAACCTCTCCTCCACTGTGTCCCTGTATCTGCGGCCCTTCTC +
Preference number: 1 (lower is better)
Translates to: SLSLQLQLCIVLLQL*QPLLHCVPVSAALL
Trigger: GAGAAGGGCCGCAGATACAGGGACACAGTGGAGGAGAGGTTGTCAAAGCTGCAGAAGCACAATGCAGAGCTGGAGCTGCAGAGAGAGCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR CCA 90 bp GGTGGTCAGGTTGCTAGGGGTGCACAGAGTGATGGGTCTCAGCTCTaGGTCAGGAGTGCTCATCAGAGGACTCAGTTCTCTGAAGGGAAG +
Preference number: 1 (lower is better)
Translates to: GGQVARGAQSDGSQL*VRSAHQRTQFSEGK
Trigger: CTTCCCTTCAGAGAACTGAGTCCTCTGATGAGCACTCCTGACCCAGAGCTGAGACCCATCACTCTGTGCACCCCTAGCAACCTGACCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
3UTR GCA 90 bp AGCCACTTGAGATCAGAAGCAAGAGCCTTTCCCAGCCCAGCCGGTTaGAAAGCATCATGGGAGACAGGTGGGGCGTGGTTTTTCCTCAAA +
Preference number: 1 (lower is better)
Translates to: SHLRSEARAFPSPAG*KASWETGGAWFFLK
Trigger: TTTGAGGAAAAACCACGCCCCACCTGTCTCCCATGATGCTTTGCAACCGGCTGGGCTGGGAAAGGCTCTTGCTTCTGATCTCAAGTGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
3UTR GCA 90 bp CCTGTATCTGCGGCCCTTCTCTTCATAGCTGTGCCGGTGGGTAGCTaGCTTTTCCAGCTCTGCTTCCAGCTTCTGAACCTTTTCCAGATC +
Preference number: 1 (lower is better)
Translates to: PVSAALLFIAVPVGS*LFQLCFQLLNLFQI
Trigger: GATCTGGAAAAGGTTCAGAAGCTGGAAGCAGAGCTGGAAAAGGCAGCTACCCACCGGCACAGCTATGAAGAGAAGGGCCGCAGATACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR GCA 90 bp AGCATCTGCTCTGCTCGCTCTCTCTGCAGCTCCAGCTCTGCATTGTaGTTCTGCAGCTTTGACAACCTCTCCTCCACTGTGTCCCTGTAT +
Preference number: 1 (lower is better)
Translates to: SICSARSLCSSSSAL*FCSFDNLSSTVSLY
Trigger: ATACAGGGACACAGTGGAGGAGAGGTTGTCAAAGCTGCAGAAGCACAATGCAGAGCTGGAGCTGCAGAGAGAGCGAGCAGAGCAGATGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR GCA 90 bp TCATGGGCTTTACCACAGTTTCCGAGGAGGTCACAATTTTTCTGTTaGACAGCCACTGAGCCACTTTGCTGGTCTCCAGGCCCAAGAGCT +
Preference number: 1 (lower is better)
Translates to: SWALPQFPRRSQFFC*TATEPLCWSPGPRA
Trigger: AGCTCTTGGGCCTGGAGACCAGCAAAGTGGCTCAGTGGCTGTGCAACAGAAAAATTGTGACCTCCTCGGAAACTGTGGTAAAGCCCATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR TCA 90 bp ACCAGGAACAAAACCGAGCCTTCAGGAATTGCAACAATAGCCACTTaGGATCAGAAGCAAGAGCCTTTCCCAGCCCAGCCGGTTGCAAAG +
Preference number: 1 (lower is better)
Translates to: TRNKTEPSGIATIAT*DQKQEPFPAQPVAK
Trigger: CTTTGCAACCGGCTGGGCTGGGAAAGGCTCTTGCTTCTGATCTCAAGTGGCTATTGTTGCAATTCCTGAAGGCTCGGTTTTGTTCCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
3UTR GCA 90 bp TTCCCAACAGTGGTCCGGAAGTGCTTGGTGTTCGGCTTGATGACCTaGTTTGCAGATTTAACTGTGATCATCGCCCCAAAGGGAGAAGAC +
Preference number: 1 (lower is better)
Translates to: FPTVVRKCLVFGLMT*FADLTVIIAPKGED
Trigger: GTCTTCTCCCTTTGGGGCGATGATCACAGTTAAATCTGCAAAGCAGGTCATCAAGCCGAACACCAAGCACTTCCGGACCACTGTTGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR GCA 90 bp TGGGCACTGATGCGAATCGTTTCTAAAACGCCACAGGCTCGCAGCTaGTGGACAATCCGCTTGGAGTCAAACTCAAAGGGCATTTTCTCA +
Preference number: 1 (lower is better)
Translates to: WALMRIVSKTPQARS*WTIRLESNSKGIFS
Trigger: TGAGAAAATGCCCTTTGAGTTTGACTCCAAGCGGATTGTCCAGCAGCTGCGAGCCTGTGGCGTTTTAGAAACGATTCGCATCAGTGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR GCA 90 bp ACCTCTGACATCCGTTCTCTCATCTCCCGTTTCTGTGACTGCACGTaGTTTTCCACATCTATCTTCTGGGCTTGCAGCAGCTCTATCTCC +
Preference number: 1 (lower is better)
Translates to: TSDIRSLISRFCDCT*FSTSIFWACSSSIS
Trigger: GGAGATAGAGCTGCTGCAAGCCCAGAAGATAGATGTGGAAAAGCACGTGCAGTCACAGAAACGGGAGATGAGAGAACGGATGTCAGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR GCA 90 bp TTGGTGACCTCTGACATCCGTTCTCTCATCTCCCGTTTCTGTGACTaGACGTGCTTTTCCACATCTATCTTCTGGGCTTGCAGCAGCTCT +
Preference number: 1 (lower is better)
Translates to: LVTSDIRSLISRFCD*TCFSTSIFWACSSS
Trigger: AGAGCTGCTGCAAGCCCAGAAGATAGATGTGGAAAAGCACGTGCAGTCACAGAAACGGGAGATGAGAGAACGGATGTCAGAGGTCACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR CCA 90 bp TCCCTGAGGAACTTCCTCCTCTGCAGCCAGCCTCGCACGTGTTTCTaGATCATAATACAATCCTGTCTCAGTTTATCCAGGCGGAGTTTC +
Preference number: 1 (lower is better)
Translates to: SLRNFLLCSQPRTCF*IIIQSCLSLSRRSF
Trigger: GAAACTCCGCCTGGATAAACTGAGACAGGATTGTATTATGATCCAGAAACACGTGCGAGGCTGGCTGCAGAGGAGGAAGTTCCTCAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR GCA 90 bp AAGTACAGAGAGCTGCGGAACTTGTTCCCAACAGTGGTCCGGAAGTaGTTGGTGTTCGGCTTGATGACCTGCTTTGCAGATTTAACTGTG +
Preference number: 1 (lower is better)
Translates to: KYRELRNLFPTVVRK*LVFGLMTCFADLTV
Trigger: CACAGTTAAATCTGCAAAGCAGGTCATCAAGCCGAACACCAAGCACTTCCGGACCACTGTTGGGAACAAGTTCCGCAGCTCTCTGTACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR CCA 90 bp GCACTGATGCGAATCGTTTCTAAAACGCCACAGGCTCGCAGCTGCTaGACAATCCGCTTGGAGTCAAACTCAAAGGGCATTTTCTCATCA +
Preference number: 1 (lower is better)
Translates to: ALMRIVSKTPQARSC*TIRLESNSKGIFSS
Trigger: TGATGAGAAAATGCCCTTTGAGTTTGACTCCAAGCGGATTGTCCAGCAGCTGCGAGCCTGTGGCGTTTTAGAAACGATTCGCATCAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR GCA 90 bp CGTTTCTGTGACTGCACGTGCTTTTCCACATCTATCTTCTGGGCTTaGAGCAGCTCTATCTCCTTCTCAAACTCAGAGATGGTCTTTGCC +
Preference number: 1 (lower is better)
Translates to: RFCDCTCFSTSIFWA*SSSISFSNSEMVFA
Trigger: GGCAAAGACCATCTCTGAGTTTGAGAAGGAGATAGAGCTGCTGCAAGCCCAGAAGATAGATGTGGAAAAGCACGTGCAGTCACAGAAACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR GCA 90 bp TGCCGGATACTTTCGTTGATGTCTGTCTCTTCTCTGAACAGCTTCTaGAGGTGGTTGATCTCTTGGCTCAGGTGCACGACTTTGAAGTTC +
Preference number: 1 (lower is better)
Translates to: CRILSLMSVSSLNSF*RWLISWLRCTTLKF
Trigger: GAACTTCAAAGTCGTGCACCTGAGCCAAGAGATCAACCACCTGCAGAAGCTGTTCAGAGAAGAGACAGACATCAACGAAAGTATCCGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR GCA 90 bp GCCACAAAACAAAGGTACCAGGAACAAAACCGAGCCTTCAGGAATTaGAACAATAGCCACTTGAGATCAGAAGCAAGAGCCTTTCCCAGC +
Preference number: 1 (lower is better)
Translates to: ATKQRYQEQNRAFRN*NNSHLRSEARAFPS
Trigger: GCTGGGAAAGGCTCTTGCTTCTGATCTCAAGTGGCTATTGTTGCAATTCCTGAAGGCTCGGTTTTGTTCCTGGTACCTTTGTTTTGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
3UTR GCA 90 bp TGGAGAGGCCATACCATGTTTTCTGATGTCAGCCTGGTGACTTCATaGCGGATACTTTCGTTGATGTCTGTCTCTTCTCTGAACAGCTTC +
Preference number: 1 (lower is better)
Translates to: WRGHTMFSDVSLVTS*RILSLMSVSSLNSF
Trigger: GAAGCTGTTCAGAGAAGAGACAGACATCAACGAAAGTATCCGGCATGAAGTCACCAGGCTGACATCAGAAAACATGGTATGGCCTCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR CCA 90 bp TCTCACTCTGTAGTCAAGGCTGACACTGAACTCGAGATAAATCTCTaGTCTCATCCTCCTGAGTGCTGGGATTCTAGTTATGGGTTACCA +
Preference number: 1 (lower is better)
Translates to: SHSVVKADTELEINL*SHPPECWDSSYGLP
Trigger: TGGTAACCCATAACTAGAATCCCAGCACTCAGGAGGATGAGACCAGAGATTTATCTCGAGTTCAGTGTCAGCCTTGACTACAGAGTGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
3UTR CCA 90 bp ATACTTTCGTTGATGTCTGTCTCTTCTCTGAACAGCTTCTGCAGGTaGTTGATCTCTTGGCTCAGGTGCACGACTTTGAAGTTCAGACCT +
Preference number: 1 (lower is better)
Translates to: ILSLMSVSSLNSFCR*LISWLRCTTLKFRP
Trigger: AGGTCTGAACTTCAAAGTCGTGCACCTGAGCCAAGAGATCAACCACCTGCAGAAGCTGTTCAGAGAAGAGACAGACATCAACGAAAGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR TCA 90 bp TGGTCTCATCCTCCTGAGTGCTGGGATTCTAGTTATGGGTTACCATaGCCTGCTCTTAGACTGAATACCCTCTTAGAGTTTCTAAAGGGA +
Preference number: 1 (lower is better)
Translates to: WSHPPECWDSSYGLP*PALRLNTLLEFLKG
Trigger: TCCCTTTAGAAACTCTAAGAGGGTATTCAGTCTAAGAGCAGGTCATGGTAACCCATAACTAGAATCCCAGCACTCAGGAGGATGAGACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
3UTR CCA 90 bp ATGTCTGTCTCTTCTCTGAACAGCTTCTGCAGGTGGTTGATCTCTTaGCTCAGGTGCACGACTTTGAAGTTCAGACCTTCAATCTCTTTT +
Preference number: 1 (lower is better)
Translates to: MSVSSLNSFCRWLIS*LRCTTLKFRPSISF
Trigger: AAAAGAGATTGAAGGTCTGAACTTCAAAGTCGTGCACCTGAGCCAAGAGATCAACCACCTGCAGAAGCTGTTCAGAGAAGAGACAGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR CCA 90 bp TTTAAACAGGCCTCTGAGGCCCAAACACACAGAATACCTCACTGTTaGTTCCTCATCAAGGTTTATCCCAGGAATACACATCCTACGAAG +
Preference number: 1 (lower is better)
Translates to: FKQASEAQTHRIPHC*FLIKVYPRNTHPTK
Trigger: CTTCGTAGGATGTGTATTCCTGGGATAAACCTTGATGAGGAACCAACAGTGAGGTATTCTGTGTGTTTGGGCCTCAGAGGCCTGTTTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR-3UTR GCA 90 bp GGTGGTCAGGTTGCTAGGGGTGCACAGAGTGATGGGTCTCAGCTCTGGGTCAGGTCCCTCCGTGGCACCTaGACTCAGGACTCCAGGGAA +
Preference number: 2 (lower is better)
Translates to: GGQVARGAQSDGSQLWVRSLRGT*TQDSRE
Trigger: TTCCCTGGAGTCCTGAGTGCAGGTGCCACGGAGGGA...CCTGACCCAGAGCTGAGACCCATCACTCTGTGCACCCCTAGCAACCTGACCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
3UTR CAA 90 bp GGCAGTGATGGCCTTCCTCACTGTCTGCTGACCCCGGAAGTACCGTaGGATTGTCAGGGCAGCCTGTCTCTCCCTGAGGAACTTCCTCCT +
Preference number: 2 (lower is better)
Translates to: GSDGLPHCLLTPEVP*DCQGSLSLPEELPP
Trigger: AGGAGGAAGTTCCTCAGGGAGAGACAGGCTGCCCTGACAATCCAACGGTACTTCCGGGGTCAGCAGACAGTGAGGAAGGCCATCACTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR-3UTR GCA 90 bp AAAACGCCACAGGCTCGCAGCTGCTGGACAATCCGCTTGGAGTCAAACTCAAAGCCCACCGTGGTGACCTaGACATTGCCCAGGTGCAGG +
Preference number: 2 (lower is better)
Translates to: KTPQARSCWTIRLESNSKPTVVT*TLPRCR
Trigger: CCTGCACCTGGGCAATGTGCAGGTCACCACGGTGGG...CTTTGAGTTTGACTCCAAGCGGATTGTCCAGCAGCTGCGAGCCTGTGGCGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR CAA 90 bp CTCGCTCTCTCTGCAGCTCCAGCTCTGCATTGTGCTTCTGCAGCTTaGACAACCTCTCCTCCACTGTGTCCCTGTATCTGCGGCCCTTCT +
Preference number: 2 (lower is better)
Translates to: LALSAAPALHCASAA*TTSPPLCPCICGPS
Trigger: AGAAGGGCCGCAGATACAGGGACACAGTGGAGGAGAGGTTGTCAAAGCTGCAGAAGCACAATGCAGAGCTGGAGCTGCAGAGAGAGCGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR-3UTR TCA 90 bp CCTTTGAGAAGACCCATCAATCACAAAGAAATGGATGGGACGGTGACCGCAAGGGCGCATCCCTGGCGTTaGTGGCCTGAGGCCTGGTCA +
Preference number: 2 (lower is better)
Translates to: PLRRPINHKEMDGTVTARAHPWR*WPEAWS
Trigger: TGACCAGGCCTCAGGCCATCAACGCCAGGGATGCGC...CCTTGCGGTCACCGTCCCATCCATTTCTTTGTGATTGATGGGTCTTCTCAAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR-3UTR GCA 90 bp CTTCTGCAAGCGCTGGACCCTGTAAGTCAGCTGAATGTTGAGCACGAACCTGCGGCCACTGAGCCACTTTaGTGGTCTCCAGGCCCAAGA +
Preference number: 2 (lower is better)
Translates to: LLQALDPVSQLNVEHEPAATEPL*WSPGPR
Trigger: TCTTGGGCCTGGAGACCAGCAAAGTGGCTCAGTGGC...CGCAGGTTCGTGCTCAACATTCAGCTGACTTACAGGGTCCAGCGCTTGCAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR-3UTR GCA 90 bp AACGAGCCCTTCCTGTCAACAGGGATGGGGCAAAAAGACTTTGTTCCAGTGGCCCCCAGCCCAGCCGGTTaGAAAGCATCATGGGAGACA +
Preference number: 2 (lower is better)
Translates to: NEPFLSTGMGQKDFVPVAPSPAG*KASWET
Trigger: TGTCTCCCATGATGCTTTGCAACCGGCTGGGCTGGG...GGCCACTGGAACAAAGTCTTTTTGCCCCATCCCTGTTGACAGGAAGGGCTCGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
3UTR-3UTR GCA 90 bp CCAGGCCTCCTTCAAAGCAGTGGCAGTGATGGCCTTCCTCACTGTCTGCTGACCGCAAGTACAGAGAGCTaGGGAACTTGTTCCCAACAG +
Preference number: 2 (lower is better)
Translates to: PGLLQSSGSDGLPHCLLTASTES*GTCSQQ
Trigger: CTGTTGGGAACAAGTTCCGCAGCTCTCTGTACTTGC...GGTCAGCAGACAGTGAGGAAGGCCATCACTGCCACTGCTTTGAAGGAGGCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR-3UTR CCA 90 bp GGTGACCGCAAGGCACCGTGGATAAGAAAGCATGTGTATGTGTGTATCCTGAAAGCAGAGCGGCCAGGCTaGTCAGCTTCTCCACCAGCC +
Preference number: 2 (lower is better)
Translates to: GDRKAPWIRKHVYVCILKAERPG*SASPPA
Trigger: GGCTGGTGGAGAAGCTGACCAGCCTGGCCGCTCTGC...TTTCAGGATACACACATACACATGCTTTCTTATCCACGGTGCCTTGCGGTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR-3UTR TCA 90 bp TTGAGGGTTTCCATGAGCAAGTACAGAGAGCTGCGGAACTTGTTCCCAACAGTGCTGGCGTTGATGGCCTaGGGCCTGGTCATGGGCTTT +
Preference number: 2 (lower is better)
Translates to: LRVSMSKYRELRNLFPTVLALMA*GLVMGF
Trigger: AAAGCCCATGACCAGGCCTCAGGCCATCAACGCCAG...CACTGTTGGGAACAAGTTCCGCAGCTCTCTGTACTTGCTCATGGAAACCCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR-3UTR TCA 90 bp CCAGGCCTCCTTCAAAGCAGTGGCAGTGATGGCCTTCCTCACTGTCTGCTGACCGGTAGCTCTGGGCACTaGTGCGAATCGTTTCTAAAA +
Preference number: 2 (lower is better)
Translates to: PGLLQSSGSDGLPHCLLTGSSGH*CESFLK
Trigger: TTTTAGAAACGATTCGCATCAGTGCCCAGAGCTACC...GGTCAGCAGACAGTGAGGAAGGCCATCACTGCCACTGCTTTGAAGGAGGCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR-3UTR GCA 90 bp CCCCAGAGAGGACCATTCTGTGGTGTCACAGCTACTGCCTGTGACCATCAGACTGTGAGGGGAGGTCCCTaGCACAAAACAAAGGTACCA +
Preference number: 2 (lower is better)
Translates to: PQRGPFCGVTATACDHQTVRGGP*HKTKVP
Trigger: TGGTACCTTTGTTTTGTGGCAGGGACCTCCCCTCAC...AGTCTGATGGTCACAGGCAGTAGCTGTGACACCACAGAATGGTCCTCTCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
3UTR-3UTR CCA 90 bp TCCTGTATATATGTGGGTGAGGGGAGGTCCCTGCCACAAAACAAAGGTACCAGGGGTTGCAAAGCATCATaGGAGACAGGTGGGGCGTGG +
Preference number: 2 (lower is better)
Translates to: SCIYVGEGRSLPQNKGTRGCKAS*ETGGAW
Trigger: CCACGCCCCACCTGTCTCCCATGATGCTTTGCAACC...CCTGGTACCTTTGTTTTGTGGCAGGGACCTCCCCTCACCCACATATATACAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
3UTR-3UTR CCA 90 bp GGTGGTCAGGTTGCTAGGGGTGCACAGAGTGATGGGTCTCAGCTCTGGGTCAGGCATGGAACTCAACTGTaGCTTCATACATGTCTCTGC +
Preference number: 2 (lower is better)
Translates to: GGQVARGAQSDGSQLWVRHGTQL*LHTCLC
Trigger: GCAGAGACATGTATGAAGCCACAGTTGAGTTCCATG...CCTGACCCAGAGCTGAGACCCATCACTCTGTGCACCCCTAGCAACCTGACCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
3UTR-3UTR CCA 90 bp GAGGGTGGTCAGGTTGCTAGGGGTGCACAGAGTGATGGGTCTCAGCTCTGGGTCAAGACTTTGTTCCAGTaGCCACGTGGAATTCTTTCC +
Preference number: 2 (lower is better)
Translates to: EGGQVARGAQSDGSQLWVKTLFQ*PRGILS
Trigger: GGAAAGAATTCCACGTGGCCACTGGAACAAAGTCTT...GACCCAGAGCTGAGACCCATCACTCTGTGCACCCCTAGCAACCTGACCACCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
3UTR-3UTR CCA 90 bp GAACTTGTTCCCAACAGTGGTCCGGAAGTGCTTGGTGTTCGGCTTGATGACCTGGAGCGTAGATCTTTTTaGCCAGCGCATCCCTGGCGT +
Preference number: 2 (lower is better)
Translates to: ELVPNSGPEVLGVRLDDLERRSF*PAHPWR
Trigger: ACGCCAGGGATGCGCTGGCCAAAAAGATCTACGCTC...CAGGTCATCAAGCCGAACACCAAGCACTTCCGGACCACTGTTGGGAACAAGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR-3UTR TCA 90 bp TCGCACGTGTTTCTGGATCATAATACAATCCTGTCTCAGTTTATCCAGGCGGAGCGTTGCCCACCGTGGTaGCCTGCACATTGCCCAGGT +
Preference number: 2 (lower is better)
Translates to: SHVFLDHNTILSQFIQAERCPPW*PAHCPG
Trigger: ACCTGGGCAATGTGCAGGTCACCACGGTGGGCAACG...CTCCGCCTGGATAAACTGAGACAGGATTGTATTATGATCCAGAAACACGTGCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR-3UTR TCA 90 bp CTTCTGCAAGCGCTGGACCCTGTAAGTCAGCTGAATGTTGAGCACGAACCTGCGGAAACTTGCTTGCTCTaGGGATCTCCACCAGCATGT +
Preference number: 2 (lower is better)
Translates to: LLQALDPVSQLNVEHEPAETCLL*GSPPAC
Trigger: ACATGCTGGTGGAGATCCTCAGAGCAAGCAAGTTTC...CGCAGGTTCGTGCTCAACATTCAGCTGACTTACAGGGTCCAGCGCTTGCAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR-3UTR TCA 90 bp TCTGGGACAATGGTGACAAGCAGGCTGTGGAGAGGCCATACCATGTTTTCTGATCAGCCTGTCTCTCCCTaGGGAACTTCCTCCTCTGCA +
Preference number: 2 (lower is better)
Translates to: SGTMVTSRLWRGHTMFSDQPVSP*GTSSSA
Trigger: TGCAGAGGAGGAAGTTCCTCAGGGAGAGACAGGCTG...ATCAGAAAACATGGTATGGCCTCTCCACAGCCTGCTTGTCACCATTGTCCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR-3UTR GCA 90 bp GGTGACCGCAAGGCACCGTGGATAAGAAAGCATGTGTATGTGTGTATCCTGAAAGAAGCCCCTGGTGTGTaGCTGGATGGTGATGGTGGC +
Preference number: 2 (lower is better)
Translates to: GDRKAPWIRKHVYVCILKEAPGV*LDGDGG
Trigger: GCCACCATCACCATCCAGGCACACACCAGGGGCTTC...TTTCAGGATACACACATACACATGCTTTCTTATCCACGGTGCCTTGCGGTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR-3UTR CCA 90 bp CCTTTGAGAAGACCCATCAATCACAAAGAAATGGATGGGACGGTGACCGCAAGGCAGGCTCGCAGCTGCTaGACAATCCGCTTGGAGTCA +
Preference number: 2 (lower is better)
Translates to: PLRRPINHKEMDGTVTARQARSC*TIRLES
Trigger: TGACTCCAAGCGGATTGTCCAGCAGCTGCGAGCCTG...CCTTGCGGTCACCGTCCCATCCATTTCTTTGTGATTGATGGGTCTTCTCAAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR-3UTR TCA 90 bp TCTCTTAAGTTTAAACAGGCCTCTGAGGCCCAAACACACAGAATACCTCACTGTTCAGGCGGTCAGAGGTaGCCTGTCCCTCCTCCAGCT +
Preference number: 2 (lower is better)
Translates to: SLKFKQASEAQTHRIPHCSGGQR*PVPPPA
Trigger: AGCTGGAGGAGGGACAGGTCACCTCTGACCGCCTGA...ACAGTGAGGTATTCTGTGTGTTTGGGCCTCAGAGGCCTGTTTAAACTTAAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR-3UTR CCA 90 bp TTGAGGGTTTCCATGAGCAAGTACAGAGAGCTGCGGAACTTGTTCCCAACAGTGACTGAGCCACTTTGCTaGTCTCCAGGCCCAAGAGCT +
Preference number: 2 (lower is better)
Translates to: LRVSMSKYRELRNLFPTVTEPLC*SPGPRA
Trigger: AGCTCTTGGGCCTGGAGACCAGCAAAGTGGCTCAGT...CACTGTTGGGAACAAGTTCCGCAGCTCTCTGTACTTGCTCATGGAAACCCTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR-3UTR CCA 90 bp CCAGGCCTCCTTCAAAGCAGTGGCAGTGATGGCCTTCCTCACTGTCTGCTGACCCCTCGCACGTGTTTCTaGATCATAATACAATCCTGT +
Preference number: 2 (lower is better)
Translates to: PGLLQSSGSDGLPHCLLTPRTCF*IIIQSC
Trigger: ACAGGATTGTATTATGATCCAGAAACACGTGCGAGG...GGTCAGCAGACAGTGAGGAAGGCCATCACTGCCACTGCTTTGAAGGAGGCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR CAA 90 bp CGGAACTTGTTCCCAACAGTGGTCCGGAAGTGCTTGGTGTTCGGCTaGATGACCTGCTTTGCAGATTTAACTGTGATCATCGCCCCAAAG +
Preference number: 2 (lower is better)
Translates to: RNLFPTVVRKCLVFG*MTCFADLTVIIAPK
Trigger: CTTTGGGGCGATGATCACAGTTAAATCTGCAAAGCAGGTCATCAAGCCGAACACCAAGCACTTCCGGACCACTGTTGGGAACAAGTTCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR-3UTR TCA 90 bp GGTGACCGCAAGGCACCGTGGATAAGAAAGCATGTGTATGTGTGTATCCTGAAAGTCATCCTCACTGACTaGAGACCTCTCGTTGCCCAC +
Preference number: 2 (lower is better)
Translates to: GDRKAPWIRKHVYVCILKVILTD*RPLVAH
Trigger: GTGGGCAACGAGAGGTCTTCAGTCAGTGAGGATGAC...TTTCAGGATACACACATACACATGCTTTCTTATCCACGGTGCCTTGCGGTCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR-3UTR TCA 90 bp TCTGGGACAATGGTGACAAGCAGGCTGTGGAGAGGCCATACCATGTTTTCTGATGACTGTCATCCTCACTaGCTGAAGACCTCTCGTTGC +
Preference number: 2 (lower is better)
Translates to: SGTMVTSRLWRGHTMFSDDCHPH*LKTSRC
Trigger: GCAACGAGAGGTCTTCAGTCAGTGAGGATGACAGTC...ATCAGAAAACATGGTATGGCCTCTCCACAGCCTGCTTGTCACCATTGTCCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR-3UTR GCA 90 bp CACAGAGTGATGGGTCTCAGCTCTGGGTCAGGAGTGCTCATCAGAGGACTCAGTCGAGCCTTCAGGAATTaGAACAATAGCCACTTGAGA +
Preference number: 2 (lower is better)
Translates to: HRVMGLSSGSGVLIRGLSRAFRN*NNSHLR
Trigger: TCTCAAGTGGCTATTGTTGCAATTCCTGAAGGCTCG...ACTGAGTCCTCTGATGAGCACTCCTGACCCAGAGCTGAGACCCATCACTCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
3UTR-3UTR CCA 90 bp CTTCCTGTCAACAGGGATGGGGCAAAAAGACTTTGTTCCAGTGGCCACGTGGAAATCATGGGAGACAGGTaGGGCGTGGTTTTTCCTCAA +
Preference number: 2 (lower is better)
Translates to: LPVNRDGAKRLCSSGHVEIMGDR*GVVFPQ
Trigger: TTGAGGAAAAACCACGCCCCACCTGTCTCCCATGAT...TTCCACGTGGCCACTGGAACAAAGTCTTTTTGCCCCATCCCTGTTGACAGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
3UTR-3UTR CCA 90 bp GGCCACGTGGAATTCTTTCCTAGAAGGTGTAGGCATGGAACTCAACTGTGGCTTACTCCTGTATATATGTaGGTGAGGGGAGGTCCCTGC +
Preference number: 2 (lower is better)
Translates to: GHVEFFPRRCRHGTQLWLTPVYM*VRGGPC
Trigger: GCAGGGACCTCCCCTCACCCACATATATACAGGAGT...AAGCCACAGTTGAGTTCCATGCCTACACCTTCTAGGAAAGAATTCCACGTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
3UTR CAA 90 bp TACAGAGAGCTGCGGAACTTGTTCCCAACAGTGGTCCGGAAGTGCTaGGTGTTCGGCTTGATGACCTGCTTTGCAGATTTAACTGTGATC +
Preference number: 2 (lower is better)
Translates to: YRELRNLFPTVVRKC*VFGLMTCFADLTVI
Trigger: GATCACAGTTAAATCTGCAAAGCAGGTCATCAAGCCGAACACCAAGCACTTCCGGACCACTGTTGGGAACAAGTTCCGCAGCTCTCTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR-3UTR TCA 90 bp AATAATGTCTCTGGGACAATGGTGACAAGCAGGCTGTGGAGAGGCCATACCATGCAGAACACCTTCAGGTaGCTGTCATCCTCACTGACT +
Preference number: 2 (lower is better)
Translates to: NNVSGTMVTSRLWRGHTMQNTFR*LSSSLT
Trigger: AGTCAGTGAGGATGACAGTCACCTGAAGGTGTTCTG...CATGGTATGGCCTCTCCACAGCCTGCTTGTCACCATTGTCCCAGAGACATTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR-3UTR TCA 90 bp AATAATGTCTCTGGGACAATGGTGACAAGCAGGCTGTGGAGAGGCCATACCATGGGAACAGGGCTTTCTTaGAAAAAGGCGGCACAGAGA +
Preference number: 2 (lower is better)
Translates to: NNVSGTMVTSRLWRGHTMGTGLS*KKAAQR
Trigger: TCTCTGTGCCGCCTTTTTTCAAGAAAGCCCTGTTCC...CATGGTATGGCCTCTCCACAGCCTGCTTGTCACCATTGTCCCAGAGACATTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR-3UTR TCA 90 bp GGTGACCGCAAGGCACCGTGGATAAGAAAGCATGTGTATGTGTGTATCCTGAAACTGCTTGGTGACCTCTaGCATCCGTTCTCTCATCTC +
Preference number: 2 (lower is better)
Translates to: GDRKAPWIRKHVYVCILKLLGDL*HPFSHL
Trigger: GAGATGAGAGAACGGATGTCAGAGGTCACCAAGCAG...TTTCAGGATACACACATACACATGCTTTCTTATCCACGGTGCCTTGCGGTCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR-3UTR GCA 90 bp TCTCTTAAGTTTAAACAGGCCTCTGAGGCCCAAACACACAGAATACCTCACTGTCTGAGGGACAGCTCCTaGTGGGTCATGAGGATGCCA +
Preference number: 2 (lower is better)
Translates to: SLKFKQASEAQTHRIPHCLRDSS*WVMRMP
Trigger: TGGCATCCTCATGACCCAGCAGGAGCTGTCCCTCAG...ACAGTGAGGTATTCTGTGTGTTTGGGCCTCAGAGGCCTGTTTAAACTTAAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR-3UTR CCA 90 bp TTGAGGGTTTCCATGAGCAAGTACAGAGAGCTGCGGAACTTGTTCCCAACAGTGAGTGTGAAGGTCTTCTaGGTCTCCACCATGTCAGCT +
Preference number: 2 (lower is better)
Translates to: LRVSMSKYRELRNLFPTVSVKVF*VSTMSA
Trigger: AGCTGACATGGTGGAGACCCAGAAGACCTTCACACT...CACTGTTGGGAACAAGTTCCGCAGCTCTCTGTACTTGCTCATGGAAACCCTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR-3UTR CCA 90 bp CCTTTGAGAAGACCCATCAATCACAAAGAAATGGATGGGACGGTGACCGCAAGGAACAGCTTCTGCAGGTaGTTGATCTCTTGGCTCAGG +
Preference number: 2 (lower is better)
Translates to: PLRRPINHKEMDGTVTARNSFCR*LISWLR
Trigger: CCTGAGCCAAGAGATCAACCACCTGCAGAAGCTGTT...CCTTGCGGTCACCGTCCCATCCATTTCTTTGTGATTGATGGGTCTTCTCAAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR-3UTR GCA 90 bp AATAATGTCTCTGGGACAATGGTGACAAGCAGGCTGTGGAGAGGCCATACCATGAGCCTGGTGACTTCATaGCGGATACTTTCGTTGATG +
Preference number: 2 (lower is better)
Translates to: NNVSGTMVTSRLWRGHTMSLVTS*RILSLM
Trigger: CATCAACGAAAGTATCCGGCATGAAGTCACCAGGCT...CATGGTATGGCCTCTCCACAGCCTGCTTGTCACCATTGTCCCAGAGACATTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR-3UTR CCA 90 bp TCTGGGACAATGGTGACAAGCAGGCTGTGGAGAGGCCATACCATGTTTTCTGATTACTGGTTAGAATCCTaGATGAGCCTGTGCAGAACC +
Preference number: 2 (lower is better)
Translates to: SGTMVTSRLWRGHTMFSDYWLES*MSLCRT
Trigger: GGTTCTGCACAGGCTCATCCAGGATTCTAACCAGTA...ATCAGAAAACATGGTATGGCCTCTCCACAGCCTGCTTGTCACCATTGTCCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR CAA 90 bp CTTTCGTTGATGTCTGTCTCTTCTCTGAACAGCTTCTGCAGGTGGTaGATCTCTTGGCTCAGGTGCACGACTTTGAAGTTCAGACCTTCA +
Preference number: 2 (lower is better)
Translates to: LSLMSVSSLNSFCRW*ISWLRCTTLKFRPS
Trigger: TGAAGGTCTGAACTTCAAAGTCGTGCACCTGAGCCAAGAGATCAACCACCTGCAGAAGCTGTTCAGAGAAGAGACAGACATCAACGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR-3UTR TCA 90 bp AGCTCTGGGTCAGGAGTGCTCATCAGAGGACTCAGTTCTCTGAAGGGAAGGAAAAGTTATGGGTTACCATaGCCTGCTCTTAGACTGAAT +
Preference number: 2 (lower is better)
Translates to: SSGSGVLIRGLSSLKGRKSYGLP*PALRLN
Trigger: ATTCAGTCTAAGAGCAGGTCATGGTAACCCATAACT...TTTCCTTCCCTTCAGAGAACTGAGTCCTCTGATGAGCACTCCTGACCCAGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
3UTR-3UTR TCA 90 bp TCTTCATTTAAATGTTCCAGATCTTCCACAGAGAGCCTGCTTCTAACATCTTCGCTGTTGCACAGCCACTaGGCCACTTTGCTGGTCTCC +
Preference number: 2 (lower is better)
Translates to: SSFKCSRSSTESLLLTSSLLHSH*ATLLVS
Trigger: GGAGACCAGCAAAGTGGCTCAGTGGCTGTGCAACAG...CGAAGATGTTAGAAGCAGGCTCTCTGTGGAAGATCTGGAACATTTAAATGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR-3UTR GCA 90 bp GCCAGTTTTCATCGGTGCCATGAGGCAACAAGCATTCTTCATCCAGCAACTCCAAACGCCTGGTTGATTTaGTCGACAATGAAGTCGAAC +
Preference number: 2 (lower is better)
Translates to: ASFHRCHEATSILHPATPNAWLI*STMKSN
Trigger: GTTCGACTTCATTGTCGAGCAAATCAACCAGGCGTT...TGGAGTTGCTGGATGAAGAATGCTTGTTGCCTCATGGCACCGATGAAAACTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR-3UTR GCA 90 bp AATAATGTCTCTGGGACAATGGTGACAAGCAGGCTGTGGAGAGGCCATACCATGCCAGCAACTCCAAAATaGCCATTTTTGCCTCGATCA +
Preference number: 2 (lower is better)
Translates to: NNVSGTMVTSRLWRGHTMPATPK*PFLPRS
Trigger: TGATCGAGGCAAAAATGGGCATTTTGGAGTTGCTGG...CATGGTATGGCCTCTCCACAGCCTGCTTGTCACCATTGTCCCAGAGACATTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR-3UTR GCA 90 bp TCTTCATTTAAATGTTCCAGATCTTCCACAGAGAGCCTGCTTCTAACATCTTCGGTGCCGGTGGGTAGCTaGCTTTTCCAGCTCTGCTTC +
Preference number: 2 (lower is better)
Translates to: SSFKCSRSSTESLLLTSSVPVGS*LFQLCF
Trigger: GAAGCAGAGCTGGAAAAGGCAGCTACCCACCGGCAC...CGAAGATGTTAGAAGCAGGCTCTCTGTGGAAGATCTGGAACATTTAAATGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR CAA 90 bp GATGTCTGTCTCTTCTCTGAACAGCTTCTGCAGGTGGTTGATCTCTaGGCTCAGGTGCACGACTTTGAAGTTCAGACCTTCAATCTCTTT +
Preference number: 2 (lower is better)
Translates to: DVCLFSEQLLQVVDL*AQVHDFEVQTFNLF
Trigger: AAAGAGATTGAAGGTCTGAACTTCAAAGTCGTGCACCTGAGCCAAGAGATCAACCACCTGCAGAAGCTGTTCAGAGAAGAGACAGACATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR CAA 90 bp ATGTTTTCTGATGTCAGCCTGGTGACTTCATGCCGGATACTTTCGTaGATGTCTGTCTCTTCTCTGAACAGCTTCTGCAGGTGGTTGATC +
Preference number: 2 (lower is better)
Translates to: MFSDVSLVTSCRILS*MSVSSLNSFCRWLI
Trigger: GATCAACCACCTGCAGAAGCTGTTCAGAGAAGAGACAGACATCAACGAAAGTATCCGGCATGAAGTCACCAGGCTGACATCAGAAAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR-3UTR TCA 90 bp TCTCTTAAGTTTAAACAGGCCTCTGAGGCCCAAACACACAGAATACCTCACTGTTCTCATCATTTGGCTTaGTGCAACGGACGTAGTGGG +
Preference number: 2 (lower is better)
Translates to: SLKFKQASEAQTHRIPHCSHHLA*CNGRSG
Trigger: CCCACTACGTCCGTTGCATCAAGCCAAATGATGAGA...ACAGTGAGGTATTCTGTGTGTTTGGGCCTCAGAGGCCTGTTTAAACTTAAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR-3UTR TCA 90 bp TCTCTTAAGTTTAAACAGGCCTCTGAGGCCCAAACACACAGAATACCTCACTGTCTGATGTCAGCCTGGTaGCTTCATGCCGGATACTTT +
Preference number: 2 (lower is better)
Translates to: SLKFKQASEAQTHRIPHCLMSAW*LHAGYF
Trigger: AAAGTATCCGGCATGAAGTCACCAGGCTGACATCAG...ACAGTGAGGTATTCTGTGTGTTTGGGCCTCAGAGGCCTGTTTAAACTTAAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR-3UTR GCA 90 bp AATAATGTCTCTGGGACAATGGTGACAAGCAGGCTGTGGAGAGGCCATACCATGTCACAATTTTTCTGTTaGACAGCCACTGAGCCACTT +
Preference number: 2 (lower is better)
Translates to: NNVSGTMVTSRLWRGHTMSQFFC*TATEPL
Trigger: AAGTGGCTCAGTGGCTGTGCAACAGAAAAATTGTGA...CATGGTATGGCCTCTCCACAGCCTGCTTGTCACCATTGTCCCAGAGACATTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR-3UTR GCA 90 bp GGTGACCGCAAGGCACCGTGGATAAGAAAGCATGTGTATGTGTGTATCCTGAAACTCAAAACTGAGAAGTaGAACGCCTGGTTGATTTGC +
Preference number: 2 (lower is better)
Translates to: GDRKAPWIRKHVYVCILKLKTEK*NAWLIC
Trigger: GCAAATCAACCAGGCGTTGCACTTCTCAGTTTTGAG...TTTCAGGATACACACATACACATGCTTTCTTATCCACGGTGCCTTGCGGTCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR-3UTR GCA 90 bp TCTCTTAAGTTTAAACAGGCCTCTGAGGCCCAAACACACAGAATACCTCACTGTCTTCTGCAGGATCACTaGCTTGTGCTCCTGCAACAA +
Preference number: 2 (lower is better)
Translates to: SLKFKQASEAQTHRIPHCLLQDH*LVLLQQ
Trigger: TTGTTGCAGGAGCACAAGGCAGTGATCCTGCAGAAG...ACAGTGAGGTATTCTGTGTGTTTGGGCCTCAGAGGCCTGTTTAAACTTAAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR-3UTR CCA 90 bp ATGGGTCTCAGCTCTGGGTCAGGAGTGCTCATCAGAGGACTCAGTTCTCTGAAGAGTTCTCACAAAACCTaGGAAAAGTGGATTTCTCAA +
Preference number: 2 (lower is better)
Translates to: MGLSSGSGVLIRGLSSLKSSHKT*EKWISQ
Trigger: TTGAGAAATCCACTTTTCCCAGGTTTTGTGAGAACT...CTTCAGAGAACTGAGTCCTCTGATGAGCACTCCTGACCCAGAGCTGAGACCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
3UTR-3UTR CCA 90 bp TGTTGGATGATGAAGGATGAGTTTGACATTCTAGGCTTCTCGAATAACGAGTTCCCTGAGGCCTGGTCATaGGCTTTACCACAGTTTCCG +
Preference number: 2 (lower is better)
Translates to: CWMMKDEFDILGFSNNEFPEAWS*ALPQFP
Trigger: CGGAAACTGTGGTAAAGCCCATGACCAGGCCTCAGG...GAACTCGTTATTCGAGAAGCCTAGAATGTCAAACTCATCCTTCATCATCCAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR-3UTR GCA 90 bp CCTTTGAGAAGACCCATCAATCACAAAGAAATGGATGGGACGGTGACCGCAAGGTGCAGGTTAAACTGCTaGTGTAGTTTTTCATTAGCG +
Preference number: 2 (lower is better)
Translates to: PLRRPINHKEMDGTVTARCRLNC*CSFSLA
Trigger: CGCTAATGAAAAACTACAGCAGCAGTTTAACCTGCA...CCTTGCGGTCACCGTCCCATCCATTTCTTTGTGATTGATGGGTCTTCTCAAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR-3UTR GCA 90 bp TCTCTTAAGTTTAAACAGGCCTCTGAGGCCCAAACACACAGAATACCTCACTGTTGTGCAGAACCACCTTaGACACCTCCTTCTTATCAC +
Preference number: 2 (lower is better)
Translates to: SLKFKQASEAQTHRIPHCCAEPP*TPPSYH
Trigger: GTGATAAGAAGGAGGTGTGCAAGGTGGTTCTGCACA...ACAGTGAGGTATTCTGTGTGTTTGGGCCTCAGAGGCCTGTTTAAACTTAAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR-3UTR CCA 90 bp TCGCACGTGTTTCTGGATCATAATACAATCCTGTCTCAGTTTATCCAGGCGGAGCTACCAAACTGGTACTaGTTAGAATCCTGGATGAGC +
Preference number: 2 (lower is better)
Translates to: SHVFLDHNTILSQFIQAELPNWY*LESWMS
Trigger: GCTCATCCAGGATTCTAACCAGTACCAGTTTGGTAG...CTCCGCCTGGATAAACTGAGACAGGATTGTATTATGATCCAGAAACACGTGCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR-3UTR TCA 90 bp TCTCTTAAGTTTAAACAGGCCTCTGAGGCCCAAACACACAGAATACCTCACTGTTGGCTGCAGAGAAAATaGAGAAGGACATGTGGAAGA +
Preference number: 2 (lower is better)
Translates to: SLKFKQASEAQTHRIPHCWLQRK*RRTCGR
Trigger: TCTTCCACATGTCCTTCTTCATTTTCTCTGCAGCCA...ACAGTGAGGTATTCTGTGTGTTTGGGCCTCAGAGGCCTGTTTAAACTTAAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR-3UTR GCA 90 bp ATCCTCCTGAGTGCTGGGATTCTAGTTATGGGTTACCATGACCTGCTCTTAGACGGTTTTTCCTCAAATTaGAACCCATCACAATGCTCT +
Preference number: 2 (lower is better)
Translates to: ILLSAGILVMGYHDLLLDGFSSN*NPSQCS
Trigger: AGAGCATTGTGATGGGTTGCAATTTGAGGAAAAACC...GTCTAAGAGCAGGTCATGGTAACCCATAACTAGAATCCCAGCACTCAGGAGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
3UTR-3UTR GCA 90 bp TCTCTTAAGTTTAAACAGGCCTCTGAGGCCCAAACACACAGAATACCTCACTGTCCTGAAAGCATTGTGTaGATATGTGTGCGTGTATCT +
Preference number: 2 (lower is better)
Translates to: SLKFKQASEAQTHRIPHCPESIV*ICVRVS
Trigger: AGATACACGCACACATATGCACACAATGCTTTCAGG...ACAGTGAGGTATTCTGTGTGTTTGGGCCTCAGAGGCCTGTTTAAACTTAAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR-3UTR TCA 90 bp TGTTGGATGATGAAGGATGAGTTTGACATTCTAGGCTTCTCGAATAACGAGTTCAAGGTGTTTAAATTCTaGCTGCTGTGCGGATGCACA +
Preference number: 2 (lower is better)
Translates to: CWMMKDEFDILGFSNNEFKVFKF*LLCGCT
Trigger: TGTGCATCCGCACAGCAGTCAGAATTTAAACACCTT...GAACTCGTTATTCGAGAAGCCTAGAATGTCAAACTCATCCTTCATCATCCAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR-3UTR GCA 90 bp TCGCACGTGTTTCTGGATCATAATACAATCCTGTCTCAGTTTATCCAGGCGGAGACGTGCAGGTTAAACTaGTGCTGTAGTTTTTCATTA +
Preference number: 2 (lower is better)
Translates to: SHVFLDHNTILSQFIQAETCRLN*CCSFSL
Trigger: TAATGAAAAACTACAGCAGCAGTTTAACCTGCACGT...CTCCGCCTGGATAAACTGAGACAGGATTGTATTATGATCCAGAAACACGTGCGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR-3UTR GCA 90 bp TCTTCATTTAAATGTTCCAGATCTTCCACAGAGAGCCTGCTTCTAACATCTTCGTGTTTAAATTCTGACTaGTGTGCGGATGCACAAAGC +
Preference number: 2 (lower is better)
Translates to: SSFKCSRSSTESLLLTSSCLNSD*CADAQS
Trigger: GCTTTGTGCATCCGCACAGCAGTCAGAATTTAAACA...CGAAGATGTTAGAAGCAGGCTCTCTGTGGAAGATCTGGAACATTTAAATGAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR-3UTR GCA 90 bp TCTCTTAAGTTTAAACAGGCCTCTGAGGCCCAAACACACAGAATACCTCACTGTTCAAGAACTAGTCTTTaGTGTTCTTCTTTCTGCACA +
Preference number: 2 (lower is better)
Translates to: SLKFKQASEAQTHRIPHCSRTSL*CSSFCT
Trigger: TGTGCAGAAAGAAGAACAGCAAAGACTAGTTCTTGA...ACAGTGAGGTATTCTGTGTGTTTGGGCCTCAGAGGCCTGTTTAAACTTAAGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR CCA 72 bp TACCGCCTCCTGGCTAGGAAGCCCCTGGTGTGTGCCTaGATGGTGATGGTGGCCACACGGATCAGCTGGTAC +
Preference number: 3 (lower is better)
Translates to: YRLLARKPLVCA*MVMVATRISWY
Trigger: GTACCAGCTGATCCGTGTGGCCACCATCACCATCCAGGCACACACCAGGGGCTTCCTAGCCAGGAGGCGGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR CCA 72 bp CCTTTTCCAGATCGCCAACCCGCAGAGCGGCCAGGCTaGTCAGCTTCTCCACCAGCCCGTGGTTCTCTCTGT +
Preference number: 3 (lower is better)
Translates to: PFPDRQPAERPG*SASPPARGSLC
Trigger: ACAGAGAGAACCACGGGCTGGTGGAGAAGCTGACCAGCCTGGCCGCTCTGCGGGTTGGCGATCTGGAAAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR GCA 72 bp GGCCAGCCAGGCCCTCGCATACTTCTGCAGGATCACTaGCTTGTGCTCCTGCAACAACTTCCGGTACCGCCT +
Preference number: 3 (lower is better)
Translates to: GQPGPRILLQDH*LVLLQQLPVPP
Trigger: AGGCGGTACCGGAAGTTGTTGCAGGAGCACAAGGCAGTGATCCTGCAGAAGTATGCGAGGGCCTGGCTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR TCA 72 bp TACGGACCAGGTAGCCTCGGCAATACTTCTGGAGGATaGTGGCCGCCCAGGCCTCCTTCAAAGCAGTGGCAG +
Preference number: 3 (lower is better)
Translates to: YGPGSLGNTSGG*WPPRPPSKQWQ
Trigger: CTGCCACTGCTTTGAAGGAGGCCTGGGCGGCCATCATCCTCCAGAAGTATTGCCGAGGCTACCTGGTCCGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR TCA 72 bp TCCTGGCTAGGAAGCCCCTGGTGTGTGCCTGGATGGTaGTGGTGGCCACACGGATCAGCTGGTACAGGTTAC +
Preference number: 3 (lower is better)
Translates to: SWLGSPWCVPGW*WWPHGSAGTGY
Trigger: GTAACCTGTACCAGCTGATCCGTGTGGCCACCATCACCATCCAGGCACACACCAGGGGCTTCCTAGCCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR GCA 72 bp AATCTGCGCCGGGCCAGCCAGGCCCTCGCATACTTCTaGAGGATCACTGCCTTGTGCTCCTGCAACAACTTC +
Preference number: 3 (lower is better)
Translates to: NLRRASQALAYF*RITALCSCNNF
Trigger: GAAGTTGTTGCAGGAGCACAAGGCAGTGATCCTGCAGAAGTATGCGAGGGCCTGGCTGGCCCGGCGCAGATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR-3UTR CAA 90 bp GTGCTGGGGCCAAACCCAGGGCCAACTGCTCTACCACTGAGTTCTGACCCCAGATGGGGCAAAAAGACTTaGTTCCAGTGGCCACGTGGA +
Preference number: 3 (lower is better)
Translates to: VLGPNPGPTALPLSSDPRWGKKT*FQWPRG
Trigger: TCCACGTGGCCACTGGAACAAAGTCTTTTTGCCCCA...TCTGGGGTCAGAACTCAGTGGTAGAGCAGTTGGCCCTGGGTTTGGCCCCAGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
3UTR TCA 72 bp AAAGCAGTGGCAGTGATGGCCTTCCTCACTGTCTGCTaGCCCCGGAAGTACCGTTGGATTGTCAGGGCAGCC +
Preference number: 3 (lower is better)
Translates to: KAVAVMAFLTVC*PRKYRWIVRAA
Trigger: GGCTGCCCTGACAATCCAACGGTACTTCCGGGGTCAGCAGACAGTGAGGAAGGCCATCACTGCCACTGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR GCA 72 bp TCTCCTTCTCAAACTCAGAGATGGTCTTTGCCTGCTTaGTTAGGCGGGCCACCTCCCCCTTCAGGCGGTCAG +
Preference number: 3 (lower is better)
Translates to: SPSQTQRWSLPA*LGGPPPPSGGQ
Trigger: CTGACCGCCTGAAGGGGGAGGTGGCCCGCCTAAGCAAGCAGGCAAAGACCATCTCTGAGTTTGAGAAGGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR-3UTR CAA 90 bp CTTCTGCAAGCGCTGGACCCTGTAAGTCAGCTGAATGTTGAGCACGAACCTGCGAGAGAGCTGCGGAACTaGTTCCCAACAGTGGTCCGG +
Preference number: 3 (lower is better)
Translates to: LLQALDPVSQLNVEHEPARELRN*FPTVVR
Trigger: CCGGACCACTGTTGGGAACAAGTTCCGCAGCTCTCT...CGCAGGTTCGTGCTCAACATTCAGCTGACTTACAGGGTCCAGCGCTTGCAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR TCA 72 bp GAGAGGACCATTCTGTGGTGTCACAGCTACTGCCTGTaGCCATCAGACTGGAGGGTGGTCAGGTTGCTAGGG +
Preference number: 3 (lower is better)
Translates to: ERTILWCHSYCL*PSDWRVVRLLG
Trigger: CCCTAGCAACCTGACCACCCTCCAGTCTGATGGTCACAGGCAGTAGCTGTGACACCACAGAATGGTCCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
3UTR TCA 72 bp ATCTTTTTGGCCAGCGCATCCCTGGCGTTGATGGCCTaGGGCCTGGTCATGGGCTTTACCACAGTTTCCGAG +
Preference number: 3 (lower is better)
Translates to: IFLASASLALMA*GLVMGFTTVSE
Trigger: CTCGGAAACTGTGGTAAAGCCCATGACCAGGCCTCAGGCCATCAACGCCAGGGATGCGCTGGCCAAAAAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR GCA 72 bp CTCGCATACTTCTGCAGGATCACTGCCTTGTGCTCCTaGAACAACTTCCGGTACCGCCTCCTGGCTAGGAAG +
Preference number: 3 (lower is better)
Translates to: LAYFCRITALCS*NNFRYRLLARK
Trigger: CTTCCTAGCCAGGAGGCGGTACCGGAAGTTGTTGCAGGAGCACAAGGCAGTGATCCTGCAGAAGTATGCGAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR GCA 72 bp GCGGCCCTTCTCTTCATAGCTGTGCCGGTGGGTAGCTaGCTTTTCCAGCTCTGCTTCCAGCTTCTGAACCTT +
Preference number: 3 (lower is better)
Translates to: AALLFIAVPVGS*LFQLCFQLLNL
Trigger: AAGGTTCAGAAGCTGGAAGCAGAGCTGGAAAAGGCAGCTACCCACCGGCACAGCTATGAAGAGAAGGGCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR GCA 72 bp CGCTCTCTCTGCAGCTCCAGCTCTGCATTGTGCTTCTaGAGCTTTGACAACCTCTCCTCCACTGTGTCCCTG +
Preference number: 3 (lower is better)
Translates to: RSLCSSSSALCF*SFDNLSSTVSL
Trigger: CAGGGACACAGTGGAGGAGAGGTTGTCAAAGCTGCAGAAGCACAATGCAGAGCTGGAGCTGCAGAGAGAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR GCA 72 bp GAGACGGAAGAAGTAGCCACAGCGAGTGTGATCCTCTaGAATCTCAGAGGCAGGGGAGTAGCCAGCATTGCC +
Preference number: 3 (lower is better)
Translates to: ETEEVATASVIL*NLRGRGVASIA
Trigger: GGCAATGCTGGCTACTCCCCTGCCTCTGAGATTGCAGAGGATCACACTCGCTGTGGCTACTTCTTCCGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR TCA 72 bp CGAGGTATGTCCACCTGGAAGGGTAGCTCTGGGCACTaGTGCGAATCGTTTCTAAAACGCCACAGGCTCGCA +
Preference number: 3 (lower is better)
Translates to: RGMSTWKGSSGH*CESFLKRHRLA
Trigger: TGCGAGCCTGTGGCGTTTTAGAAACGATTCGCATCAGTGCCCAGAGCTACCCTTCCAGGTGGACATACCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR TCA 72 bp TCTGCAAGCGCTGGACCCTGTAAGTCAGCTGAATGTTaGGCACGAACCTGCGGATGTTCTGGAATCTGCGCC +
Preference number: 3 (lower is better)
Translates to: SASAGPCKSAEC*ARTCGCSGICA
Trigger: GGCGCAGATTCCAGAACATCCGCAGGTTCGTGCTCAACATTCAGCTGACTTACAGGGTCCAGCGCTTGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR GCA 72 bp AGGGCAGCCTGTCTCTCCCTGAGGAACTTCCTCCTCTaGAGCCAGCCTCGCACGTGTTTCTGGATCATAATA +
Preference number: 3 (lower is better)
Translates to: RAACLSLRNFLL*SQPRTCFWIII
Trigger: TATTATGATCCAGAAACACGTGCGAGGCTGGCTGCAGAGGAGGAAGTTCCTCAGGGAGAGACAGGCTGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR CCA 72 bp CAGCCCAGCCGGTTGCAAAGCATCATGGGAGACAGGTaGGGCGTGGTTTTTCCTCAAATTGCAACCCATCAC +
Preference number: 3 (lower is better)
Translates to: QPSRLQSIMGDR*GVVFPQIATHH
Trigger: GTGATGGGTTGCAATTTGAGGAAAAACCACGCCCCACCTGTCTCCCATGATGCTTTGCAACCGGCTGGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
3UTR CCA 72 bp GTTGCTAGGGGTGCACAGAGTGATGGGTCTCAGCTCTaGGTCAGGAGTGCTCATCAGAGGACTCAGTTCTCT +
Preference number: 3 (lower is better)
Translates to: VARGAQSDGSQL*VRSAHQRTQFS
Trigger: AGAGAACTGAGTCCTCTGATGAGCACTCCTGACCCAGAGCTGAGACCCATCACTCTGTGCACCCCTAGCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
3UTR-3UTR CAA 90 bp AAAACGCCACAGGCTCGCAGCTGCTGGACAATCCGCTTGGAGTCAAACTCAAAGTGGGGTGTGGTGGCATaGAGGGTTTCCATGAGCAAG +
Preference number: 3 (lower is better)
Translates to: KTPQARSCWTIRLESNSKWGVVA*RVSMSK
Trigger: CTTGCTCATGGAAACCCTCAATGCCACCACACCCCA...CTTTGAGTTTGACTCCAAGCGGATTGTCCAGCAGCTGCGAGCCTGTGGCGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR-3UTR CAA 90 bp CCTTTGAGAAGACCCATCAATCACAAAGAAATGGATGGGACGGTGACCGCAAGGATGGTCTTTGCCTGCTaGCTTAGGCGGGCCACCTCC +
Preference number: 3 (lower is better)
Translates to: PLRRPINHKEMDGTVTARMVFAC*LRRATS
Trigger: GGAGGTGGCCCGCCTAAGCAAGCAGGCAAAGACCAT...CCTTGCGGTCACCGTCCCATCCATTTCTTTGTGATTGATGGGTCTTCTCAAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR GCA 72 bp ATGCGAATCGTTTCTAAAACGCCACAGGCTCGCAGCTaGTGGACAATCCGCTTGGAGTCAAACTCAAAGGGC +
Preference number: 3 (lower is better)
Translates to: MRIVSKTPQARS*WTIRLESNSKG
Trigger: GCCCTTTGAGTTTGACTCCAAGCGGATTGTCCAGCAGCTGCGAGCCTGTGGCGTTTTAGAAACGATTCGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR CCA 72 bp GCCGGTTGCAAAGCATCATGGGAGACAGGTGGGGCGTaGTTTTTCCTCAAATTGCAACCCATCACAATGCTC +
Preference number: 3 (lower is better)
Translates to: AGCKASWETGGA*FFLKLQPITML
Trigger: GAGCATTGTGATGGGTTGCAATTTGAGGAAAAACCACGCCCCACCTGTCTCCCATGATGCTTTGCAACCGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
3UTR-3UTR CAA 90 bp TCGCACGTGTTTCTGGATCATAATACAATCCTGTCTCAGTTTATCCAGGCGGAGGTGGTGACCTGCACATaGCCCAGGTGCAGGATGGCA +
Preference number: 3 (lower is better)
Translates to: SHVFLDHNTILSQFIQAEVVTCT*PRCRMA
Trigger: TGCCATCCTGCACCTGGGCAATGTGCAGGTCACCAC...CTCCGCCTGGATAAACTGAGACAGGATTGTATTATGATCCAGAAACACGTGCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR-3UTR CAA 90 bp TCGCACGTGTTTCTGGATCATAATACAATCCTGTCTCAGTTTATCCAGGCGGAGGTGGTCCGGAAGTGCTaGGTGTTCGGCTTGATGACC +
Preference number: 3 (lower is better)
Translates to: SHVFLDHNTILSQFIQAEVVRKC*VFGLMT
Trigger: GGTCATCAAGCCGAACACCAAGCACTTCCGGACCAC...CTCCGCCTGGATAAACTGAGACAGGATTGTATTATGATCCAGAAACACGTGCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR TCA 72 bp AAAACCGAGCCTTCAGGAATTGCAACAATAGCCACTTaGGATCAGAAGCAAGAGCCTTTCCCAGCCCAGCCG +
Preference number: 3 (lower is better)
Translates to: KTEPSGIATIAT*DQKQEPFPAQP
Trigger: CGGCTGGGCTGGGAAAGGCTCTTGCTTCTGATCTCAAGTGGCTATTGTTGCAATTCCTGAAGGCTCGGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
3UTR GCA 72 bp TTACCACAGTTTCCGAGGAGGTCACAATTTTTCTGTTaGACAGCCACTGAGCCACTTTGCTGGTCTCCAGGC +
Preference number: 3 (lower is better)
Translates to: LPQFPRRSQFFC*TATEPLCWSPG
Trigger: GCCTGGAGACCAGCAAAGTGGCTCAGTGGCTGTGCAACAGAAAAATTGTGACCTCCTCGGAAACTGTGGTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR GCA 72 bp TTTTCTTTTAGCTCCTCAGACTTCTCTTGCAGCATCTaGTCTGCTCGCTCTCTCTGCAGCTCCAGCTCTGCA +
Preference number: 3 (lower is better)
Translates to: FSFSSSDFSCSI*SARSLCSSSSA
Trigger: TGCAGAGCTGGAGCTGCAGAGAGAGCGAGCAGAGCAGATGCTGCAAGAGAAGTCTGAGGAGCTAAAAGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR GCA 72 bp ATCCGTTCTCTCATCTCCCGTTTCTGTGACTGCACGTaGTTTTCCACATCTATCTTCTGGGCTTGCAGCAGC +
Preference number: 3 (lower is better)
Translates to: IRSLISRFCDCT*FSTSIFWACSS
Trigger: GCTGCTGCAAGCCCAGAAGATAGATGTGGAAAAGCACGTGCAGTCACAGAAACGGGAGATGAGAGAACGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR CCA 72 bp CGAATCGTTTCTAAAACGCCACAGGCTCGCAGCTGCTaGACAATCCGCTTGGAGTCAAACTCAAAGGGCATT +
Preference number: 3 (lower is better)
Translates to: RIVSKTPQARSC*TIRLESNSKGI
Trigger: AATGCCCTTTGAGTTTGACTCCAAGCGGATTGTCCAGCAGCTGCGAGCCTGTGGCGTTTTAGAAACGATTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR-3UTR CAA 90 bp CCTTTGAGAAGACCCATCAATCACAAAGAAATGGATGGGACGGTGACCGCAAGGTGCTTGGTGTTCGGCTaGATGACCTGCTTTGCAGAT +
Preference number: 3 (lower is better)
Translates to: PLRRPINHKEMDGTVTARCLVFG*MTCFAD
Trigger: ATCTGCAAAGCAGGTCATCAAGCCGAACACCAAGCA...CCTTGCGGTCACCGTCCCATCCATTTCTTTGTGATTGATGGGTCTTCTCAAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR GCA 72 bp TCTGACATCCGTTCTCTCATCTCCCGTTTCTGTGACTaGACGTGCTTTTCCACATCTATCTTCTGGGCTTGC +
Preference number: 3 (lower is better)
Translates to: SDIRSLISRFCD*TCFSTSIFWAC
Trigger: GCAAGCCCAGAAGATAGATGTGGAAAAGCACGTGCAGTCACAGAAACGGGAGATGAGAGAACGGATGTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR GCA 72 bp CTTTCGTTGATGTCTGTCTCTTCTCTGAACAGCTTCTaGAGGTGGTTGATCTCTTGGCTCAGGTGCACGACT +
Preference number: 3 (lower is better)
Translates to: LSLMSVSSLNSF*RWLISWLRCTT
Trigger: AGTCGTGCACCTGAGCCAAGAGATCAACCACCTGCAGAAGCTGTTCAGAGAAGAGACAGACATCAACGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR CCA 72 bp AAACGCCACAGGCTCGCAGCTGCTGGACAATCCGCTTaGAGTCAAACTCAAAGGGCATTTTCTCATCATTTG +
Preference number: 3 (lower is better)
Translates to: KRHRLAAAGQSA*SQTQRAFSHHL
Trigger: CAAATGATGAGAAAATGCCCTTTGAGTTTGACTCCAAGCGGATTGTCCAGCAGCTGCGAGCCTGTGGCGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR CCA 72 bp ATAAACACAAGAAGAAGGGAACAACTCAGGGACATCTaGGGGATGAACAGATGGCCTGACATGACCATGCCC +
Preference number: 3 (lower is better)
Translates to: INTRRREQLRDI*GMNRWPDMTMP
Trigger: GGGCATGGTCATGTCAGGCCATCTGTTCATCCCCCAGATGTCCCTGAGTTGTTCCCTTCTTCTTGTGTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR-3UTR CAA 90 bp AATAATGTCTCTGGGACAATGGTGACAAGCAGGCTGTGGAGAGGCCATACCATGCTCAGGTGCACGACTTaGAAGTTCAGACCTTCAATC +
Preference number: 3 (lower is better)
Translates to: NNVSGTMVTSRLWRGHTMLRCTT*KFRPSI
Trigger: GATTGAAGGTCTGAACTTCAAAGTCGTGCACCTGAG...CATGGTATGGCCTCTCCACAGCCTGCTTGTCACCATTGTCCCAGAGACATTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR-3UTR CAA 90 bp TCTGGGACAATGGTGACAAGCAGGCTGTGGAGAGGCCATACCATGTTTTCTGATTGCCGGATACTTTCGTaGATGTCTGTCTCTTCTCTG +
Preference number: 3 (lower is better)
Translates to: SGTMVTSRLWRGHTMFSDCRILS*MSVSSL
Trigger: CAGAGAAGAGACAGACATCAACGAAAGTATCCGGCA...ATCAGAAAACATGGTATGGCCTCTCCACAGCCTGCTTGTCACCATTGTCCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR TCA 72 bp TTTTTCCTCAAATTGCAACCCATCACAATGCTCTGGTaGATAACTGCATCCCTCCGTGGCACCTGCACTCAG +
Preference number: 3 (lower is better)
Translates to: FFLKLQPITMLW*ITASLRGTCTQ
Trigger: CTGAGTGCAGGTGCCACGGAGGGATGCAGTTATTCACCAGAGCATTGTGATGGGTTGCAATTTGAGGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
3UTR TCA 72 bp GAAGACCCATCAATCACAAAGAAATGGATGGGACGGTaGCCGCAAGGCACCGTGGATAAGAAAGCATGTGTA +
Preference number: 3 (lower is better)
Translates to: EDPSITKKWMGR*PQGTVDKKACV
Trigger: TACACATGCTTTCTTATCCACGGTGCCTTGCGGTCACCGTCCCATCCATTTCTTTGTGATTGATGGGTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR GCA 72 bp GACTGCACGTGCTTTTCCACATCTATCTTCTGGGCTTaGAGCAGCTCTATCTCCTTCTCAAACTCAGAGATG +
Preference number: 3 (lower is better)
Translates to: DCTCFSTSIFWA*SSSISFSNSEM
Trigger: CATCTCTGAGTTTGAGAAGGAGATAGAGCTGCTGCAAGCCCAGAAGATAGATGTGGAAAAGCACGTGCAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR CCA 72 bp TTCTTTCCTAGAAGGTGTAGGCATGGAACTCAACTGTaGCTTCATACATGTCTCTGCACTTCACGGGAACCC +
Preference number: 3 (lower is better)
Translates to: FFPRRCRHGTQL*LHTCLCTSREP
Trigger: GGGTTCCCGTGAAGTGCAGAGACATGTATGAAGCCACAGTTGAGTTCCATGCCTACACCTTCTAGGAAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
3UTR CCA 72 bp TCTTCTCTGAACAGCTTCTGCAGGTGGTTGATCTCTTaGCTCAGGTGCACGACTTTGAAGTTCAGACCTTCA +
Preference number: 3 (lower is better)
Translates to: SSLNSFCRWLIS*LRCTTLKFRPS
Trigger: TGAAGGTCTGAACTTCAAAGTCGTGCACCTGAGCCAAGAGATCAACCACCTGCAGAAGCTGTTCAGAGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR-3UTR CAA 90 bp ATCCTCCTGAGTGCTGGGATTCTAGTTATGGGTTACCATGACCTGCTCTTAGACTGCAACAATAGCCACTaGAGATCAGAAGCAAGAGCC +
Preference number: 3 (lower is better)
Translates to: ILLSAGILVMGYHDLLLDCNNSH*RSEARA
Trigger: GGCTCTTGCTTCTGATCTCAAGTGGCTATTGTTGCA...GTCTAAGAGCAGGTCATGGTAACCCATAACTAGAATCCCAGCACTCAGGAGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
3UTR-3UTR CAA 90 bp TCTCTTAAGTTTAAACAGGCCTCTGAGGCCCAAACACACAGAATACCTCACTGTAGCTCCAGCTCTGCATaGTGCTTCTGCAGCTTTGAC +
Preference number: 3 (lower is better)
Translates to: SLKFKQASEAQTHRIPHCSSSSA*CFCSFD
Trigger: GTCAAAGCTGCAGAAGCACAATGCAGAGCTGGAGCT...ACAGTGAGGTATTCTGTGTGTTTGGGCCTCAGAGGCCTGTTTAAACTTAAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR GCA 72 bp CAAAGGTACCAGGAACAAAACCGAGCCTTCAGGAATTaGAACAATAGCCACTTGAGATCAGAAGCAAGAGCC +
Preference number: 3 (lower is better)
Translates to: QRYQEQNRAFRN*NNSHLRSEARA
Trigger: GGCTCTTGCTTCTGATCTCAAGTGGCTATTGTTGCAATTCCTGAAGGCTCGGTTTTGTTCCTGGTACCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
3UTR CCA 72 bp GCCTCTGAGGCCCAAACACACAGAATACCTCACTGTTaGTTCCTCATCAAGGTTTATCCCAGGAATACACAT +
Preference number: 3 (lower is better)
Translates to: ASEAQTHRIPHC*FLIKVYPRNTH
Trigger: ATGTGTATTCCTGGGATAAACCTTGATGAGGAACCAACAGTGAGGTATTCTGTGTGTTTGGGCCTCAGAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR-3UTR CAA 90 bp GATCAGGTCAATAACAGGCTGGTTGTCATAGAAGTCTATCAGAGTCCAGGGGATATGTCAGCTCTGTCATaGACACCTTCAATGACAGTG +
Preference number: 3 (lower is better)
Translates to: DQVNNRLVVIEVYQSPGDMSALS*TPSMTV
Trigger: CACTGTCATTGAAGGTGTCAATGACAGAGCTGACAT...ATCCCCTGGACTCTGATAGACTTCTATGACAACCAGCCTGTTATTGACCTGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR-3UTR CAA 90 bp CTGGACAATCCGCTTGGAGTCAAACTCAAAGGGCATTTTCTCATCATTTGGCTTCAACGCCTGGTTGATTaGCTCGACAATGAAGTCGAA +
Preference number: 3 (lower is better)
Translates to: LDNPLGVKLKGHFLIIWLQRLVD*LDNEVE
Trigger: TTCGACTTCATTGTCGAGCAAATCAACCAGGCGTTG...AAGCCAAATGATGAGAAAATGCCCTTTGAGTTTGACTCCAAGCGGATTGTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR TCA 72 bp CCTCCTGAGTGCTGGGATTCTAGTTATGGGTTACCATaGCCTGCTCTTAGACTGAATACCCTCTTAGAGTTT +
Preference number: 3 (lower is better)
Translates to: PPECWDSSYGLP*PALRLNTLLEF
Trigger: AAACTCTAAGAGGGTATTCAGTCTAAGAGCAGGTCATGGTAACCCATAACTAGAATCCCAGCACTCAGGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
3UTR GCA 72 bp CATACCATGTTTTCTGATGTCAGCCTGGTGACTTCATaGCGGATACTTTCGTTGATGTCTGTCTCTTCTCTG +
Preference number: 3 (lower is better)
Translates to: HTMFSDVSLVTS*RILSLMSVSSL
Trigger: CAGAGAAGAGACAGACATCAACGAAAGTATCCGGCATGAAGTCACCAGGCTGACATCAGAAAACATGGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR CCA 72 bp GTAGTCAAGGCTGACACTGAACTCGAGATAAATCTCTaGTCTCATCCTCCTGAGTGCTGGGATTCTAGTTAT +
Preference number: 3 (lower is better)
Translates to: VVKADTELEINL*SHPPECWDSSY
Trigger: ATAACTAGAATCCCAGCACTCAGGAGGATGAGACCAGAGATTTATCTCGAGTTCAGTGTCAGCCTTGACTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
3UTR CCA 72 bp AAATCTTTCTTGAATCCCAGTAGTGTGAAGGTCTTCTaGGTCTCCACCATGTCAGCTCTGTCATTGACACCT +
Preference number: 3 (lower is better)
Translates to: KSFLNPSSVKVF*VSTMSALSLTP
Trigger: AGGTGTCAATGACAGAGCTGACATGGTGGAGACCCAGAAGACCTTCACACTACTGGGATTCAAGAAAGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR CCA 72 bp GCTCTGAAGAAAATTTTGGTTCTACCAAACTGGTACTaGTTAGAATCCTGGATGAGCCTGTGCAGAACCACC +
Preference number: 3 (lower is better)
Translates to: ALKKILVLPNWY*LESWMSLCRTT
Trigger: GGTGGTTCTGCACAGGCTCATCCAGGATTCTAACCAGTACCAGTTTGGTAGAACCAAAATTTTCTTCAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR GCA 72 bp CCTTTTTCAAGAACTAGTCTTTGCTGTTCTTCTTTCTaGACATCATCAAACAGCTGCCTGGTGAGCTTGTCC +
Preference number: 3 (lower is better)
Translates to: PFSRTSLCCSSF*TSSNSCLVSLS
Trigger: GGACAAGCTCACCAGGCAGCTGTTTGATGATGTGCAGAAAGAAGAACAGCAAAGACTAGTTCTTGAAAAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR-3UTR CAA 90 bp TCGCACGTGTTTCTGGATCATAATACAATCCTGTCTCAGTTTATCCAGGCGGAGGCTCTGAAGAAAATTTaGGTTCTACCAAACTGGTAC +
Preference number: 3 (lower is better)
Translates to: SHVFLDHNTILSQFIQAEALKKI*VLPNWY
Trigger: GTACCAGTTTGGTAGAACCAAAATTTTCTTCAGAGC...CTCCGCCTGGATAAACTGAGACAGGATTGTATTATGATCCAGAAACACGTGCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR GCA 72 bp GCTAGAGCTAAACATAGAAAGCTCATTCACACAATTTaGACCCACCACATGGTAATCAAACACTCGCAAACC +
Preference number: 3 (lower is better)
Translates to: ARAKHRKLIHTI*THHMVIKHSQT
Trigger: GGTTTGCGAGTGTTTGATTACCATGTGGTGGGTGCAAATTGTGTGAATGAGCTTTCTATGTTTAGCTCTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR GCA 72 bp CAGGTTGCTGAGAAGCACATAACAGAAAGTAGTGGCTaGAGAGAAAATGAAGAAGGACATGTGGAAGAAAGT +
Preference number: 3 (lower is better)
Translates to: QVAEKHITESSG*RENEEGHVEES
Trigger: ACTTTCTTCCACATGTCCTTCTTCATTTTCTCTGCAGCCACTACTTTCTGTTATGTGCTTCTCAGCAACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
3UTR TCA 72 bp AAGAAGGACATGTGGAAGAAAGTGGTTAATGACCTTTaGGAAGACCCATCAATCACAAAGAAATGGATGGGA +
Preference number: 3 (lower is better)
Translates to: KKDMWKKVVNDL*EDPSITKKWMG
Trigger: TCCCATCCATTTCTTTGTGATTGATGGGTCTTCTCAAAGGTCATTAACCACTTTCTTCCACATGTCCTTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
CDS-3UTR TCA 90 bp GGTGGTCAGGTTGCTAGGGGTGCACAGAGTGATGGGTCTCAGCTCTGGGTCAGGTTCCTCACTGTCTGCTaGCCCCGGAAGTACCGTTGG +
Preference number: 4 (lower is better)
Translates to: GGQVARGAQSDGSQLWVRFLTVC*PRKYRW
Trigger: CCAACGGTACTTCCGGGGTCAGCAGACAGTGAGGAA...CCTGACCCAGAGCTGAGACCCATCACTCTGTGCACCCCTAGCAACCTGACCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR GCA 90 bp CACGTGTGCATGTGTGGTGCTGGGGCCAAACCCAGGGCCAACTGCTCTACCACTGCCACTGAGCCACTTTaGTGGTCTCCAGGCCCAAGA +
Preference number: 4 (lower is better)
Translates to: HVCMCGAGAKPRANCSTTATEPL*WSPGPR
Trigger: TCTTGGGCCTGGAGACCAGCAAAGTGGCTCAGTGGC...AGTGGTAGAGCAGTTGGCCCTGGGTTTGGCCCCAGCACCACACATGCACACGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR GCA 90 bp CACGTGTGCATGTGTGGTGCTGGGGCCAAACCCAGGGCCAACTGCTCTACCACTCTGAGGGACAGCTCCTaGTGGGTCATGAGGATGCCA +
Preference number: 4 (lower is better)
Translates to: HVCMCGAGAKPRANCSTTLRDSS*WVMRMP
Trigger: TGGCATCCTCATGACCCAGCAGGAGCTGTCCCTCAG...AGTGGTAGAGCAGTTGGCCCTGGGTTTGGCCCCAGCACCACACATGCACACGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR GCA 90 bp TGCACACGTGTGCATGTGTGGTGCTGGGGCCAAACCCAGGGCCAACTGCTCTACGTGCCGGTGGGTAGCTaGCTTTTCCAGCTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: CTRVHVWCWGQTQGQLLYVPVGS*LFQLCF
Trigger: GAAGCAGAGCTGGAAAAGGCAGCTACCCACCGGCAC...GTAGAGCAGTTGGCCCTGGGTTTGGCCCCAGCACCACACATGCACACGTGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR GCA 90 bp TGCACACGTGTGCATGTGTGGTGCTGGGGCCAAACCCAGGGCCAACTGCTCTACATGCATCTCACTCTGTaGTTCCACGGCCCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: CTRVHVWCWGQTQGQLLYMHLTL*FHGPAL
Trigger: CAGGGCAGGGCCGTGGAAGCACAGAGTGAGATGCAT...GTAGAGCAGTTGGCCCTGGGTTTGGCCCCAGCACCACACATGCACACGTGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CCA 90 bp GAGGGTGGTCAGGTTGCTAGGGGTGCACAGAGTGATGGGTCTCAGCTCTGGGTCCCTCGGCAATACTTCTaGAGGATGATGGCCGCCCAG +
Preference number: 4 (lower is better)
Translates to: EGGQVARGAQSDGSQLWVPRQYF*RMMAAQ
Trigger: CTGGGCGGCCATCATCCTCCAGAAGTATTGCCGAGG...GACCCAGAGCTGAGACCCATCACTCTGTGCACCCCTAGCAACCTGACCACCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CCA 90 bp CGAGCCCTTCCTGTCAACAGGGATGGGGCAAAAAGACTTTGTTCCAGTGGCCACGCAGAGCGGCCAGGCTaGTCAGCTTCTCCACCAGCC +
Preference number: 4 (lower is better)
Translates to: RALPVNRDGAKRLCSSGHAERPG*SASPPA
Trigger: GGCTGGTGGAGAAGCTGACCAGCCTGGCCGCTCTGC...GTGGCCACTGGAACAAAGTCTTTTTGCCCCATCCCTGTTGACAGGAAGGGCTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CCA 90 bp GTGCTGGGGCCAAACCCAGGGCCAACTGCTCTACCACTGAGTTCTGACCCCAGAGCTTCCGGAAACCAGTaGGCTTCAGGCCGGAAATGC +
Preference number: 4 (lower is better)
Translates to: VLGPNPGPTALPLSSDPRASGNQ*ASGRKC
Trigger: GCATTTCCGGCCTGAAGCCCACTGGTTTCCGGAAGC...TCTGGGGTCAGAACTCAGTGGTAGAGCAGTTGGCCCTGGGTTTGGCCCCAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
3UTR CAA 72 bp AGCCAGGCCCTCGCATACTTCTGCAGGATCACTGCCTaGTGCTCCTGCAACAACTTCCGGTACCGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: SQALAYFCRITA*CSCNNFRYRLL
Trigger: CAGGAGGCGGTACCGGAAGTTGTTGCAGGAGCACAAGGCAGTGATCCTGCAGAAGTATGCGAGGGCCTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
CDS-3UTR TCA 90 bp AGATCAGAAGCAAGAGCCTTTCCCAGCCCAGCCGGTTGCAAAGCATCATGGGAGCGTTGCCCACCGTGGTaGCCTGCACATTGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: RSEARAFPSPAGCKASWERCPPW*PAHCPG
Trigger: ACCTGGGCAATGTGCAGGTCACCACGGTGGGCAACG...CTCCCATGATGCTTTGCAACCGGCTGGGCTGGGAAAGGCTCTTGCTTCTGATCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR TCA 90 bp GAGGGTGGTCAGGTTGCTAGGGGTGCACAGAGTGATGGGTCTCAGCTCTGGGTCGTCATCCTCACTGACTaGAGACCTCTCGTTGCCCAC +
Preference number: 4 (lower is better)
Translates to: EGGQVARGAQSDGSQLWVVILTD*RPLVAH
Trigger: GTGGGCAACGAGAGGTCTTCAGTCAGTGAGGATGAC...GACCCAGAGCTGAGACCCATCACTCTGTGCACCCCTAGCAACCTGACCACCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR TCA 90 bp ATGGGTCTCAGCTCTGGGTCAGGAGTGCTCATCAGAGGACTCAGTTCTCTGAAGGCGCATCCCTGGCGTTaGTGGCCTGAGGCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: MGLSSGSGVLIRGLSSLKAHPWR*WPEAWS
Trigger: TGACCAGGCCTCAGGCCATCAACGCCAGGGATGCGC...CTTCAGAGAACTGAGTCCTCTGATGAGCACTCCTGACCCAGAGCTGAGACCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR GCA 90 bp GAGGGTGGTCAGGTTGCTAGGGGTGCACAGAGTGATGGGTCTCAGCTCTGGGTCGATCCCGAGGGCAGGTaGACATGGTTGGCTTTCTCA +
Preference number: 4 (lower is better)
Translates to: EGGQVARGAQSDGSQLWVDPEGR*TWLAFS
Trigger: TGAGAAAGCCAACCATGTGCACCTGCCCTCGGGATC...GACCCAGAGCTGAGACCCATCACTCTGTGCACCCCTAGCAACCTGACCACCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR GCA 90 bp GGTGGTCAGGTTGCTAGGGGTGCACAGAGTGATGGGTCTCAGCTCTGGGTCAGGCATCTGTGTCGTCGATaGTGGATGAGCGCTTCCGGA +
Preference number: 4 (lower is better)
Translates to: GGQVARGAQSDGSQLWVRHLCRR*WMSASG
Trigger: TCCGGAAGCGCTCATCCAGCATCGACGACACAGATG...CCTGACCCAGAGCTGAGACCCATCACTCTGTGCACCCCTAGCAACCTGACCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CCA 90 bp GTGCTGGGGCCAAACCCAGGGCCAACTGCTCTACCACTGAGTTCTGACCCCAGAGAGGGCAGGTGCACATaGTTGGCTTTCTCAGTCGTC +
Preference number: 4 (lower is better)
Translates to: VLGPNPGPTALPLSSDPREGRCT*LAFSVV
Trigger: GACGACTGAGAAAGCCAACCATGTGCACCTGCCCTC...TCTGGGGTCAGAACTCAGTGGTAGAGCAGTTGGCCCTGGGTTTGGCCCCAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR TCA 90 bp GGTCAGGTTGCTAGGGGTGCACAGAGTGATGGGTCTCAGCTCTGGGTCAGGAGTCGCTGTAGGCGTGGATaGTGGCATCCCCGTATATTG +
Preference number: 4 (lower is better)
Translates to: GQVARGAQSDGSQLWVRSRCRRG*WHPRIL
Trigger: CAATATACGGGGATGCCATCATCCACGCCTACAGCG...ACTCCTGACCCAGAGCTGAGACCCATCACTCTGTGCACCCCTAGCAACCTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR GCA 90 bp TGCACACGTGTGCATGTGTGGTGCTGGGGCCAAACCCAGGGCCAACTGCTCTACGGTATTCCAGCTCCATaGCATCCTCCAGCAGAAGTC +
Preference number: 4 (lower is better)
Translates to: CTRVHVWCWGQTQGQLLYGIPAP*HPPAEV
Trigger: GACTTCTGCTGGAGGATGGCATGGAGCTGGAATACC...GTAGAGCAGTTGGCCCTGGGTTTGGCCCCAGCACCACACATGCACACGTGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
3UTR CAA 72 bp GAGATCAGAAGCAAGAGCCTTTCCCAGCCCAGCCGGTaGCAAAGCATCATGGGAGACAGGTGGGGCGTGGTT +
Preference number: 4 (lower is better)
Translates to: EIRSKSLSQPSR*QSIMGDRWGVV
Trigger: AACCACGCCCCACCTGTCTCCCATGATGCTTTGCAACCGGCTGGGCTGGGAAAGGCTCTTGCTTCTGATCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR TCA 90 bp AGCTCTGGGTCAGGAGTGCTCATCAGAGGACTCAGTTCTCTGAAGGGAAGGAAATCAGGCGGTCAGAGGTaGCCTGTCCCTCCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: SSGSGVLIRGLSSLKGRKSGGQR*PVPPPA
Trigger: AGCTGGAGGAGGGACAGGTCACCTCTGACCGCCTGA...TTTCCTTCCCTTCAGAGAACTGAGTCCTCTGATGAGCACTCCTGACCCAGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR GCA 90 bp CACGTGTGCATGTGTGGTGCTGGGGCCAAACCCAGGGCCAACTGCTCTACCACTGCAAGTACAGAGAGCTaGGGAACTTGTTCCCAACAG +
Preference number: 4 (lower is better)
Translates to: HVCMCGAGAKPRANCSTTASTES*GTCSQQ
Trigger: CTGTTGGGAACAAGTTCCGCAGCTCTCTGTACTTGC...AGTGGTAGAGCAGTTGGCCCTGGGTTTGGCCCCAGCACCACACATGCACACGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR GCA 90 bp ATGGGTCTCAGCTCTGGGTCAGGAGTGCTCATCAGAGGACTCAGTTCTCTGAAGGAAGCCCCTGGTGTGTaGCTGGATGGTGATGGTGGC +
Preference number: 4 (lower is better)
Translates to: MGLSSGSGVLIRGLSSLKEAPGV*LDGDGG
Trigger: GCCACCATCACCATCCAGGCACACACCAGGGGCTTC...CTTCAGAGAACTGAGTCCTCTGATGAGCACTCCTGACCCAGAGCTGAGACCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CCA 90 bp CGAGCCCTTCCTGTCAACAGGGATGGGGCAAAAAGACTTTGTTCCAGTGGCCACCGAGGTATGTCCACCTaGAAGGGTAGCTCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: RALPVNRDGAKRLCSSGHRGMST*KGSSGH
Trigger: GTGCCCAGAGCTACCCTTCCAGGTGGACATACCTCG...GTGGCCACTGGAACAAAGTCTTTTTGCCCCATCCCTGTTGACAGGAAGGGCTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CCA 90 bp ATGGGTCTCAGCTCTGGGTCAGGAGTGCTCATCAGAGGACTCAGTTCTCTGAAGCCCCTGGTGTGTGCCTaGATGGTGATGGTGGCCACA +
Preference number: 4 (lower is better)
Translates to: MGLSSGSGVLIRGLSSLKPLVCA*MVMVAT
Trigger: TGTGGCCACCATCACCATCCAGGCACACACCAGGGG...CTTCAGAGAACTGAGTCCTCTGATGAGCACTCCTGACCCAGAGCTGAGACCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CCA 90 bp CACGTGTGCATGTGTGGTGCTGGGGCCAAACCCAGGGCCAACTGCTCTACCACTAACAGCTTCTGCAGGTaGTTGATCTCTTGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: HVCMCGAGAKPRANCSTTNSFCR*LISWLR
Trigger: CCTGAGCCAAGAGATCAACCACCTGCAGAAGCTGTT...AGTGGTAGAGCAGTTGGCCCTGGGTTTGGCCCCAGCACCACACATGCACACGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR TCA 90 bp CACAGAGTGATGGGTCTCAGCTCTGGGTCAGGAGTGCTCATCAGAGGACTCAGTAGTGTGCTGCTTGCCTaGGAAGTGCAACGCCTGGTT +
Preference number: 4 (lower is better)
Translates to: HRVMGLSSGSGVLIRGLSSVLLA*EVQRLV
Trigger: AACCAGGCGTTGCACTTCTCAGGCAAGCAGCACACT...ACTGAGTCCTCTGATGAGCACTCCTGACCCAGAGCTGAGACCCATCACTCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR GCA 90 bp GCCGGTTGCAAAGCATCATGGGAGACAGGTGGGGCGTGGTTTTTCCTCAAATTGGAGATGGTCTTTGCCTaGTTGCTTAGGCGGGCCACC +
Preference number: 4 (lower is better)
Translates to: AGCKASWETGGAWFFLKLEMVFA*LLRRAT
Trigger: GGTGGCCCGCCTAAGCAAGCAGGCAAAGACCATCTC...CAATTTGAGGAAAAACCACGCCCCACCTGTCTCCCATGATGCTTTGCAACCGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR GCA 90 bp GGTGGTCAGGTTGCTAGGGGTGCACAGAGTGATGGGTCTCAGCTCTGGGTCAGGTCCCGTTTCTGTGACTaGACGTGCTTTTCCACATCT +
Preference number: 4 (lower is better)
Translates to: GGQVARGAQSDGSQLWVRSRFCD*TCFSTS
Trigger: AGATGTGGAAAAGCACGTGCAGTCACAGAAACGGGA...CCTGACCCAGAGCTGAGACCCATCACTCTGTGCACCCCTAGCAACCTGACCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR GCA 90 bp CGAGCCCTTCCTGTCAACAGGGATGGGGCAAAAAGACTTTGTTCCAGTGGCCACCAGCAGACAGGGAAGTaGAACACTGGGCGATCTCCT +
Preference number: 4 (lower is better)
Translates to: RALPVNRDGAKRLCSSGHQQTGK*NTGRSP
Trigger: AGGAGATCGCCCAGTGTTGCACTTCCCTGTCTGCTG...GTGGCCACTGGAACAAAGTCTTTTTGCCCCATCCCTGTTGACAGGAAGGGCTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CCA 90 bp GGTCAGGTTGCTAGGGGTGCACAGAGTGATGGGTCTCAGCTCTGGGTCAGGAGTAGTGTGAAGGTCTTCTaGGTCTCCACCATGTCAGCT +
Preference number: 4 (lower is better)
Translates to: GQVARGAQSDGSQLWVRSSVKVF*VSTMSA
Trigger: AGCTGACATGGTGGAGACCCAGAAGACCTTCACACT...ACTCCTGACCCAGAGCTGAGACCCATCACTCTGTGCACCCCTAGCAACCTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CCA 90 bp ATGGGTCTCAGCTCTGGGTCAGGAGTGCTCATCAGAGGACTCAGTTCTCTGAAGCAGGCTCGCAGCTGCTaGACAATCCGCTTGGAGTCA +
Preference number: 4 (lower is better)
Translates to: MGLSSGSGVLIRGLSSLKQARSC*TIRLES
Trigger: TGACTCCAAGCGGATTGTCCAGCAGCTGCGAGCCTG...CTTCAGAGAACTGAGTCCTCTGATGAGCACTCCTGACCCAGAGCTGAGACCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CCA 90 bp TGCACACGTGTGCATGTGTGGTGCTGGGGCCAAACCCAGGGCCAACTGCTCTACTACTGGTTAGAATCCTaGATGAGCCTGTGCAGAACC +
Preference number: 4 (lower is better)
Translates to: CTRVHVWCWGQTQGQLLYYWLES*MSLCRT
Trigger: GGTTCTGCACAGGCTCATCCAGGATTCTAACCAGTA...GTAGAGCAGTTGGCCCTGGGTTTGGCCCCAGCACCACACATGCACACGTGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR TCA 90 bp CCAAACCCAGGGCCAACTGCTCTACCACTGAGTTCTGACCCCAGAGATAAATGTCAGCCTGTCTCTCCCTaGGGAACTTCCTCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: PNPGPTALPLSSDPRDKCQPVSP*GTSSSA
Trigger: TGCAGAGGAGGAAGTTCCTCAGGGAGAGACAGGCTG...ACATTTATCTCTGGGGTCAGAACTCAGTGGTAGAGCAGTTGGCCCTGGGTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR TCA 90 bp AGCCACTTGAGATCAGAAGCAAGAGCCTTTCCCAGCCCAGCCGGTTGCAAAGCACCAAAAGCTGCTTGGTaGCCTCTGACATCCGTTCTC +
Preference number: 4 (lower is better)
Translates to: SHLRSEARAFPSPAGCKAPKAAW*PLTSVL
Trigger: GAGAACGGATGTCAGAGGTCACCAAGCAGCTTTTGG...TGCTTTGCAACCGGCTGGGCTGGGAAAGGCTCTTGCTTCTGATCTCAAGTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR TCA 90 bp AGCCACTTGAGATCAGAAGCAAGAGCCTTTCCCAGCCCAGCCGGTTGCAAAGCAGGTAGAACAACTGCTTaGCCGCCTGCCTCACAATCT +
Preference number: 4 (lower is better)
Translates to: SHLRSEARAFPSPAGCKAGRTTA*PPASQS
Trigger: AGATTGTGAGGCAGGCGGTCAAGCAGTTGTTCTACC...TGCTTTGCAACCGGCTGGGCTGGGAAAGGCTCTTGCTTCTGATCTCAAGTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR GCA 90 bp CGAGCCCTTCCTGTCAACAGGGATGGGGCAAAAAGACTTTGTTCCAGTGGCCACAGGATCACTGCCTTGTaGTCCTGCAACAACTTCCGG +
Preference number: 4 (lower is better)
Translates to: RALPVNRDGAKRLCSSGHRITAL*SCNNFR
Trigger: CCGGAAGTTGTTGCAGGAGCACAAGGCAGTGATCCT...GTGGCCACTGGAACAAAGTCTTTTTGCCCCATCCCTGTTGACAGGAAGGGCTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR GCA 90 bp CCCCAGAGAGGACCATTCTGTGGTGTCACAGCTACTGCCTGTGACCATCAGACTTCCTCAGACTTCTCTTaGAGCATCTGCTCTGCTCGC +
Preference number: 4 (lower is better)
Translates to: PQRGPFCGVTATACDHQTSSDFS*SICSAR
Trigger: GCGAGCAGAGCAGATGCTGCAAGAGAAGTCTGAGGA...AGTCTGATGGTCACAGGCAGTAGCTGTGACACCACAGAATGGTCCTCTCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR GCA 90 bp GGTGGTCAGGTTGCTAGGGGTGCACAGAGTGATGGGTCTCAGCTCTGGGTCAGGAGGATCTTTATGATCTaGACAGCAGACAGGGAAGTG +
Preference number: 4 (lower is better)
Translates to: GGQVARGAQSDGSQLWVRRIFMI*TADREV
Trigger: CACTTCCCTGTCTGCTGTGCAGATCATAAAGATCCT...CCTGACCCAGAGCTGAGACCCATCACTCTGTGCACCCCTAGCAACCTGACCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CCA 90 bp ATCTCTGGTCTCATCCTCCTGAGTGCTGGGATTCTAGTTATGGGTTACCATGACTCCGGTACCGCCTCCTaGCTAGGAAGCCCCTGGTGT +
Preference number: 4 (lower is better)
Translates to: ISGLILLSAGILVMGYHDSGTAS*LGSPWC
Trigger: ACACCAGGGGCTTCCTAGCCAGGAGGCGGTACCGGA...GTCATGGTAACCCATAACTAGAATCCCAGCACTCAGGAGGATGAGACCAGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CCA 90 bp CCAAACCCAGGGCCAACTGCTCTACCACTGAGTTCTGACCCCAGAGATAAATGTGTGAGCTGGCAGCCCTaGGATCATGTTCACCACCAC +
Preference number: 4 (lower is better)
Translates to: PNPGPTALPLSSDPRDKCVSWQP*DHVHHH
Trigger: GTGGTGGTGAACATGATCCCAGGGCTGCCAGCTCAC...ACATTTATCTCTGGGGTCAGAACTCAGTGGTAGAGCAGTTGGCCCTGGGTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CCA 90 bp AGCCACTTGAGATCAGAAGCAAGAGCCTTTCCCAGCCCAGCCGGTTGCAAAGCATCAGCTGCTGCAGGATaGACGTCATGGTGTAGGCAT +
Preference number: 4 (lower is better)
Translates to: SHLRSEARAFPSPAGCKASAAAG*TSWCRH
Trigger: ATGCCTACACCATGACGTCCATCCTGCAGCAGCTGA...TGCTTTGCAACCGGCTGGGCTGGGAAAGGCTCTTGCTTCTGATCTCAAGTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR TCA 90 bp ATCCTCCTGAGTGCTGGGATTCTAGTTATGGGTTACCATGACCTGCTCTTAGACCTGGCGTTGATGGCCTaGGGCCTGGTCATGGGCTTT +
Preference number: 4 (lower is better)
Translates to: ILLSAGILVMGYHDLLLDLALMA*GLVMGF
Trigger: AAAGCCCATGACCAGGCCTCAGGCCATCAACGCCAG...GTCTAAGAGCAGGTCATGGTAACCCATAACTAGAATCCCAGCACTCAGGAGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR TCA 90 bp AGCCACTTGAGATCAGAAGCAAGAGCCTTTCCCAGCCCAGCCGGTTGCAAAGCAGAAACTTGCTTGCTCTaGGGATCTCCACCAGCATGT +
Preference number: 4 (lower is better)
Translates to: SHLRSEARAFPSPAGCKAETCLL*GSPPAC
Trigger: ACATGCTGGTGGAGATCCTCAGAGCAAGCAAGTTTC...TGCTTTGCAACCGGCTGGGCTGGGAAAGGCTCTTGCTTCTGATCTCAAGTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR TCA 90 bp AGCCACTTGAGATCAGAAGCAAGAGCCTTTCCCAGCCCAGCCGGTTGCAAAGCAGGAACAGGGCTTTCTTaGAAAAAGGCGGCACAGAGA +
Preference number: 4 (lower is better)
Translates to: SHLRSEARAFPSPAGCKAGTGLS*KKAAQR
Trigger: TCTCTGTGCCGCCTTTTTTCAAGAAAGCCCTGTTCC...TGCTTTGCAACCGGCTGGGCTGGGAAAGGCTCTTGCTTCTGATCTCAAGTGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR TCA 90 bp CCCCAGAGAGGACCATTCTGTGGTGTCACAGCTACTGCCTGTGACCATCAGACTTCTCATCATTTGGCTTaGTGCAACGGACGTAGTGGG +
Preference number: 4 (lower is better)
Translates to: PQRGPFCGVTATACDHQTSHHLA*CNGRSG
Trigger: CCCACTACGTCCGTTGCATCAAGCCAAATGATGAGA...AGTCTGATGGTCACAGGCAGTAGCTGTGACACCACAGAATGGTCCTCTCTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR TCA 90 bp CGAGCCCTTCCTGTCAACAGGGATGGGGCAAAAAGACTTTGTTCCAGTGGCCACTCTGCTTCCAGCTTCTaGACCTTTTCCAGATCGCCA +
Preference number: 4 (lower is better)
Translates to: RALPVNRDGAKRLCSSGHSASSF*TFSRSP
Trigger: TGGCGATCTGGAAAAGGTTCAGAAGCTGGAAGCAGA...GTGGCCACTGGAACAAAGTCTTTTTGCCCCATCCCTGTTGACAGGAAGGGCTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR TCA 90 bp CCAAACCCAGGGCCAACTGCTCTACCACTGAGTTCTGACCCCAGAGATAAATGTGCTTCTGCAGGTGGTTaGTCTCTTGGCTCAGGTGCA +
Preference number: 4 (lower is better)
Translates to: PNPGPTALPLSSDPRDKCASAGG*SLGSGA
Trigger: TGCACCTGAGCCAAGAGATCAACCACCTGCAGAAGC...ACATTTATCTCTGGGGTCAGAACTCAGTGGTAGAGCAGTTGGCCCTGGGTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR TCA 90 bp CACAGAGTGATGGGTCTCAGCTCTGGGTCAGGAGTGCTCATCAGAGGACTCAGTCTGCCTCTCCAGCTCTaGAATCTGCTGCTTAAAGTC +
Preference number: 4 (lower is better)
Translates to: HRVMGLSSGSGVLIRGLSLPLQL*NLLLKV
Trigger: GACTTTAAGCAGCAGATTTCAGAGCTGGAGAGGCAG...ACTGAGTCCTCTGATGAGCACTCCTGACCCAGAGCTGAGACCCATCACTCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR TCA 90 bp GTGCTGGGGCCAAACCCAGGGCCAACTGCTCTACCACTGAGTTCTGACCCCAGAGTCAGAGTCTTGACTTaGTCTTGTAGCCTTCTAATC +
Preference number: 4 (lower is better)
Translates to: VLGPNPGPTALPLSSDPRVRVLT*SCSLLI
Trigger: GATTAGAAGGCTACAAGATCAAGTCAAGACTCTGAC...TCTGGGGTCAGAACTCAGTGGTAGAGCAGTTGGCCCTGGGTTTGGCCCCAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR TCA 90 bp GAAGGTGTAGGCATGGAACTCAACTGTGGCTTCATACATGTCTCTGCACTTCACGGAGAAAGCCGAGCTTaGAGCTGCTGGGGATCTGGG +
Preference number: 4 (lower is better)
Translates to: EGVGMELNCGFIHVSALHGESRA*SCWGSG
Trigger: CCCAGATCCCCAGCAGCTTCAAGCTCGGCTTTCTCC...GTGAAGTGCAGAGACATGTATGAAGCCACAGTTGAGTTCCATGCCTACACCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR GCA 90 bp GTGCTGGGGCCAAACCCAGGGCCAACTGCTCTACCACTGAGTTCTGACCCCAGATGTTTAAATTCTGACTaGTGTGCGGATGCACAAAGC +
Preference number: 4 (lower is better)
Translates to: VLGPNPGPTALPLSSDPRCLNSD*CADAQS
Trigger: GCTTTGTGCATCCGCACAGCAGTCAGAATTTAAACA...TCTGGGGTCAGAACTCAGTGGTAGAGCAGTTGGCCCTGGGTTTGGCCCCAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR GCA 90 bp GCCGGTTGCAAAGCATCATGGGAGACAGGTGGGGCGTGGTTTTTCCTCAAATTGACAGTGGTCCGGAAGTaGTTGGTGTTCGGCTTGATG +
Preference number: 4 (lower is better)
Translates to: AGCKASWETGGAWFFLKLTVVRK*LVFGLM
Trigger: CATCAAGCCGAACACCAAGCACTTCCGGACCACTGT...CAATTTGAGGAAAAACCACGCCCCACCTGTCTCCCATGATGCTTTGCAACCGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR GCA 90 bp CTTCCTGTCAACAGGGATGGGGCAAAAAGACTTTGTTCCAGTGGCCACGTGGAAACTGCCTTGTGCTCCTaGAACAACTTCCGGTACCGC +
Preference number: 4 (lower is better)
Translates to: LPVNRDGAKRLCSSGHVETALCS*NNFRYR
Trigger: GCGGTACCGGAAGTTGTTGCAGGAGCACAAGGCAGT...TTCCACGTGGCCACTGGAACAAAGTCTTTTTGCCCCATCCCTGTTGACAGGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR GCA 90 bp GGTCAGGTTGCTAGGGGTGCACAGAGTGATGGGTCTCAGCTCTGGGTCAGGAGTACATCATCAAACAGCTaGCTGGTGAGCTTGTCCATT +
Preference number: 4 (lower is better)
Translates to: GQVARGAQSDGSQLWVRSTSSNS*LVSLSI
Trigger: AATGGACAAGCTCACCAGGCAGCTGTTTGATGATGT...ACTCCTGACCCAGAGCTGAGACCCATCACTCTGTGCACCCCTAGCAACCTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR GCA 90 bp ATCCTCCTGAGTGCTGGGATTCTAGTTATGGGTTACCATGACCTGCTCTTAGACTCCACGGCCCTGCCCTaGATTCTCTCCTCTTCTCGG +
Preference number: 4 (lower is better)
Translates to: ILLSAGILVMGYHDLLLDSTALP*ILSSSR
Trigger: CCGAGAAGAGGAGAGAATGCAGGGCAGGGCCGTGGA...GTCTAAGAGCAGGTCATGGTAACCCATAACTAGAATCCCAGCACTCAGGAGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR GCA 90 bp GGCCACGTGGAATTCTTTCCTAGAAGGTGTAGGCATGGAACTCAACTGTGGCTTAGGCCGGAAATGCCCTaGAGGCTCTCATACTCCAGC +
Preference number: 4 (lower is better)
Translates to: GHVEFFPRRCRHGTQLWLRPEMP*RLSYSS
Trigger: GCTGGAGTATGAGAGCCTGCAGGGCATTTCCGGCCT...AAGCCACAGTTGAGTTCCATGCCTACACCTTCTAGGAAAGAATTCCACGTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CCA 90 bp GGTCAGGTTGCTAGGGGTGCACAGAGTGATGGGTCTCAGCTCTGGGTCAGGAGTCTACCAAACTGGTACTaGTTAGAATCCTGGATGAGC +
Preference number: 4 (lower is better)
Translates to: GQVARGAQSDGSQLWVRSLPNWY*LESWMS
Trigger: GCTCATCCAGGATTCTAACCAGTACCAGTTTGGTAG...ACTCCTGACCCAGAGCTGAGACCCATCACTCTGTGCACCCCTAGCAACCTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CCA 90 bp GTTGCAAAGCATCATGGGAGACAGGTGGGGCGTGGTTTTTCCTCAAATTGCAACCCCCGGAAGTACCGTTaGATTGTCAGGGCAGCCTGT +
Preference number: 4 (lower is better)
Translates to: VAKHHGRQVGRGFSSNCNPRKYR*IVRAAC
Trigger: ACAGGCTGCCCTGACAATCCAACGGTACTTCCGGGG...GTTGCAATTTGAGGAAAAACCACGCCCCACCTGTCTCCCATGATGCTTTGCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CCA 90 bp GTGCTGGGGCCAAACCCAGGGCCAACTGCTCTACCACTGAGTTCTGACCCCAGATCTCAAACTCAGAGATaGTCTTTGCCTGCTTGCTTA +
Preference number: 4 (lower is better)
Translates to: VLGPNPGPTALPLSSDPRSQTQR*SLPACL
Trigger: TAAGCAAGCAGGCAAAGACCATCTCTGAGTTTGAGA...TCTGGGGTCAGAACTCAGTGGTAGAGCAGTTGGCCCTGGGTTTGGCCCCAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CCA 90 bp AACGAGCCCTTCCTGTCAACAGGGATGGGGCAAAAAGACTTTGTTCCAGTGGCCCCTCTCCTTCCCTTCTaGATGCATCTCACTCTGTGC +
Preference number: 4 (lower is better)
Translates to: NEPFLSTGMGQKDFVPVAPLLPF*MHLTLC
Trigger: GCACAGAGTGAGATGCATCCAGAAGGGAAGGAGAGG...GGCCACTGGAACAAAGTCTTTTTGCCCCATCCCTGTTGACAGGAAGGGCTCGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CCA 90 bp CACGTGTGCATGTGTGGTGCTGGGGCCAAACCCAGGGCCAACTGCTCTACCACTTTCTGGTTGCTTCTTTaGGAACTTGATGGCTTCATG +
Preference number: 4 (lower is better)
Translates to: HVCMCGAGAKPRANCSTTFWLLL*ELDGFM
Trigger: CATGAAGCCATCAAGTTCCCAAAGAAGCAACCAGAA...AGTGGTAGAGCAGTTGGCCCTGGGTTTGGCCCCAGCACCACACATGCACACGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR TCA 90 bp GAGGGTGGTCAGGTTGCTAGGGGTGCACAGAGTGATGGGTCTCAGCTCTGGGTCATTCCGTTCATTTTCTaGCTGAAAGACAACTCTGGA +
Preference number: 4 (lower is better)
Translates to: EGGQVARGAQSDGSQLWVIPFIF*LKDNSG
Trigger: TCCAGAGTTGTCTTTCAGTCAGAAAATGAACGGAAT...GACCCAGAGCTGAGACCCATCACTCTGTGCACCCCTAGCAACCTGACCACCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR TCA 90 bp ATCCTCCTGAGTGCTGGGATTCTAGTTATGGGTTACCATGACCTGCTCTTAGACCTGTTGCACAGCCACTaGGCCACTTTGCTGGTCTCC +
Preference number: 4 (lower is better)
Translates to: ILLSAGILVMGYHDLLLDLLHSH*ATLLVS
Trigger: GGAGACCAGCAAAGTGGCTCAGTGGCTGTGCAACAG...GTCTAAGAGCAGGTCATGGTAACCCATAACTAGAATCCCAGCACTCAGGAGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR TCA 90 bp CTTCCTGTCAACAGGGATGGGGCAAAAAGACTTTGTTCCAGTGGCCACGTGGAAAAGGCGGCACAGAGATaGAACTTGCTTGCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: LPVNRDGAKRLCSSGHVEKAAQR*NLLALR
Trigger: CCTCAGAGCAAGCAAGTTTCATCTCTGTGCCGCCTT...TTCCACGTGGCCACTGGAACAAAGTCTTTTTGCCCCATCCCTGTTGACAGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR TCA 90 bp GAAGGTGTAGGCATGGAACTCAACTGTGGCTTCATACATGTCTCTGCACTTCACTGTGTGCCTGGATGGTaGTGGTGGCCACACGGATCA +
Preference number: 4 (lower is better)
Translates to: EGVGMELNCGFIHVSALHCVPGW*WWPHGS
Trigger: TGATCCGTGTGGCCACCATCACCATCCAGGCACACA...GTGAAGTGCAGAGACATGTATGAAGCCACAGTTGAGTTCCATGCCTACACCTTC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR TCA 90 bp ATCCTCCTGAGTGCTGGGATTCTAGTTATGGGTTACCATGACCTGCTCTTAGACGTCGTCGATGCTGGATaGGCGCTTCCGGAAACCAGT +
Preference number: 4 (lower is better)
Translates to: ILLSAGILVMGYHDLLLDVVDAG*ALPETS
Trigger: ACTGGTTTCCGGAAGCGCTCATCCAGCATCGACGAC...GTCTAAGAGCAGGTCATGGTAACCCATAACTAGAATCCCAGCACTCAGGAGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR GCA 90 bp GGTGGTCAGGTTGCTAGGGGTGCACAGAGTGATGGGTCTCAGCTCTGGGTCAGGCAAAATGCCCATTTTTaGCTCGATCAGGTCAATAAC +
Preference number: 4 (lower is better)
Translates to: GGQVARGAQSDGSQLWVRQNAHF*LDQVNN
Trigger: GTTATTGACCTGATCGAGGCAAAAATGGGCATTTTG...CCTGACCCAGAGCTGAGACCCATCACTCTGTGCACCCCTAGCAACCTGACCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR GCA 90 bp CCCCAGAGAGGACCATTCTGTGGTGTCACAGCTACTGCCTGTGACCATCAGACTTCCAGCTCTGCATTGTaGTTCTGCAGCTTTGACAAC +
Preference number: 4 (lower is better)
Translates to: PQRGPFCGVTATACDHQTSSSAL*FCSFDN
Trigger: GTTGTCAAAGCTGCAGAAGCACAATGCAGAGCTGGA...AGTCTGATGGTCACAGGCAGTAGCTGTGACACCACAGAATGGTCCTCTCTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR GCA 90 bp CGAGCCCTTCCTGTCAACAGGGATGGGGCAAAAAGACTTTGTTCCAGTGGCCACTCTATCTTCTGGGCTTaGAGCAGCTCTATCTCCTTC +
Preference number: 4 (lower is better)
Translates to: RALPVNRDGAKRLCSSGHSIFWA*SSSISF
Trigger: GAAGGAGATAGAGCTGCTGCAAGCCCAGAAGATAGA...GTGGCCACTGGAACAAAGTCTTTTTGCCCCATCCCTGTTGACAGGAAGGGCTCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR GCA 90 bp GGTCAGGTTGCTAGGGGTGCACAGAGTGATGGGTCTCAGCTCTGGGTCAGGAGTAGCTCTGAAATCTGCTaGTTAAAGTCTGGGATCATC +
Preference number: 4 (lower is better)
Translates to: GQVARGAQSDGSQLWVRSSSEIC*LKSGII
Trigger: GATGATCCCAGACTTTAAGCAGCAGATTTCAGAGCT...ACTCCTGACCCAGAGCTGAGACCCATCACTCTGTGCACCCCTAGCAACCTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR GCA 90 bp AGCCACTTGAGATCAGAAGCAAGAGCCTTTCCCAGCCCAGCCGGTTGCAAAGCATCAAGATCCTGCTTCTaGCTCTCCAGCTCTGAAATC +
Preference number: 4 (lower is better)
Translates to: SHLRSEARAFPSPAGCKASRSCF*LSSSEI
Trigger: GATTTCAGAGCTGGAGAGGCAGAAGCAGGATCTTGA...TGCTTTGCAACCGGCTGGGCTGGGAAAGGCTCTTGCTTCTGATCTCAAGTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR GCA 90 bp GAGGGTGGTCAGGTTGCTAGGGGTGCACAGAGTGATGGGTCTCAGCTCTGGGTCAAGCAGTTCTTATTCTaGTGTGGGCTGTTATACTTC +
Preference number: 4 (lower is better)
Translates to: EGGQVARGAQSDGSQLWVKQFLF*CGLLYF
Trigger: GAAGTATAACAGCCCACAGCAGAATAAGAACTGCTT...GACCCAGAGCTGAGACCCATCACTCTGTGCACCCCTAGCAACCTGACCACCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CCA 90 bp GTTGCAAAGCATCATGGGAGACAGGTGGGGCGTGGTTTTTCCTCAAATTGCAACACTGAGCCACTTTGCTaGTCTCCAGGCCCAAGAGCT +
Preference number: 4 (lower is better)
Translates to: VAKHHGRQVGRGFSSNCNTEPLC*SPGPRA
Trigger: AGCTCTTGGGCCTGGAGACCAGCAAAGTGGCTCAGT...GTTGCAATTTGAGGAAAAACCACGCCCCACCTGTCTCCCATGATGCTTTGCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CCA 90 bp GGCCACGTGGAATTCTTTCCTAGAAGGTGTAGGCATGGAACTCAACTGTGGCTTGAGCGTAGATCTTTTTaGCCAGCGCATCCCTGGCGT +
Preference number: 4 (lower is better)
Translates to: GHVEFFPRRCRHGTQLWLERRSF*PAHPWR
Trigger: ACGCCAGGGATGCGCTGGCCAAAAAGATCTACGCTC...AAGCCACAGTTGAGTTCCATGCCTACACCTTCTAGGAAAGAATTCCACGTGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CCA 90 bp ATGGGTCTCAGCTCTGGGTCAGGAGTGCTCATCAGAGGACTCAGTTCTCTGAAGAGGTGGTTGATCTCTTaGCTCAGGTGCACGACTTTG +
Preference number: 4 (lower is better)
Translates to: MGLSSGSGVLIRGLSSLKRWLIS*LRCTTL
Trigger: CAAAGTCGTGCACCTGAGCCAAGAGATCAACCACCT...CTTCAGAGAACTGAGTCCTCTGATGAGCACTCCTGACCCAGAGCTGAGACCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CCA 90 bp TCCTGTATATATGTGGGTGAGGGGAGGTCCCTGCCACAAAACAAAGGTACCAGGGAACAGGATGTGAGCTaGCAGCCCTGGGATCATGTT +
Preference number: 4 (lower is better)
Translates to: SCIYVGEGRSLPQNKGTREQDVS*QPWDHV
Trigger: AACATGATCCCAGGGCTGCCAGCTCACATCCTGTTC...CCTGGTACCTTTGTTTTGTGGCAGGGACCTCCCCTCACCCACATATATACAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CCA 90 bp GGCCACGTGGAATTCTTTCCTAGAAGGTGTAGGCATGGAACTCAACTGTGGCTTCTGTGTCGTCGATGCTaGATGAGCGCTTCCGGAAAC +
Preference number: 4 (lower is better)
Translates to: GHVEFFPRRCRHGTQLWLLCRRC*MSASGN
Trigger: GTTTCCGGAAGCGCTCATCCAGCATCGACGACACAG...AAGCCACAGTTGAGTTCCATGCCTACACCTTCTAGGAAAGAATTCCACGTGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR TCA 90 bp TCCTGTATATATGTGGGTGAGGGGAGGTCCCTGCCACAAAACAAAGGTACCAGGCAGAACACCTTCAGGTaGCTGTCATCCTCACTGACT +
Preference number: 4 (lower is better)
Translates to: SCIYVGEGRSLPQNKGTRQNTFR*LSSSLT
Trigger: AGTCAGTGAGGATGACAGTCACCTGAAGGTGTTCTG...CCTGGTACCTTTGTTTTGTGGCAGGGACCTCCCCTCACCCACATATATACAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR TCA 90 bp AACGAGCCCTTCCTGTCAACAGGGATGGGGCAAAAAGACTTTGTTCCAGTGGCCGGTAGCTCTGGGCACTaGTGCGAATCGTTTCTAAAA +
Preference number: 4 (lower is better)
Translates to: NEPFLSTGMGQKDFVPVAGSSGH*CESFLK
Trigger: TTTTAGAAACGATTCGCATCAGTGCCCAGAGCTACC...GGCCACTGGAACAAAGTCTTTTTGCCCCATCCCTGTTGACAGGAAGGGCTCGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR TCA 90 bp TGGAATTCTTTCCTAGAAGGTGTAGGCATGGAACTCAACTGTGGCTTCATACATCCCTCCTCCAGCTGGTaGTGCAGTTGCGACCTCTCG +
Preference number: 4 (lower is better)
Translates to: WNSFLEGVGMELNCGFIHPSSSW*CSCDLS
Trigger: CGAGAGGTCGCAACTGCATCACCAGCTGGAGGAGGG...ATGTATGAAGCCACAGTTGAGTTCCATGCCTACACCTTCTAGGAAAGAATTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR TCA 90 bp AGCTCTGGGTCAGGAGTGCTCATCAGAGGACTCAGTTCTCTGAAGGGAAGGAAAGCTTCTTTGGGAACTTaGTGGCTTCATGCGGTTCGT +
Preference number: 4 (lower is better)
Translates to: SSGSGVLIRGLSSLKGRKASLGT*WLHAVR
Trigger: ACGAACCGCATGAAGCCATCAAGTTCCCAAAGAAGC...TTTCCTTCCCTTCAGAGAACTGAGTCCTCTGATGAGCACTCCTGACCCAGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR TCA 90 bp AGCCACTTGAGATCAGAAGCAAGAGCCTTTCCCAGCCCAGCCGGTTGCAAAGCATCTTGGTCAGAGTCTTaGCTTGATCTTGTAGCCTTC +
Preference number: 4 (lower is better)
Translates to: SHLRSEARAFPSPAGCKASWSES*LDLVAF
Trigger: GAAGGCTACAAGATCAAGTCAAGACTCTGACCAAGA...TGCTTTGCAACCGGCTGGGCTGGGAAAGGCTCTTGCTTCTGATCTCAAGTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR TCA 90 bp CACAGAGTGATGGGTCTCAGCTCTGGGTCAGGAGTGCTCATCAGAGGACTCAGTGGCTGTTATACTTCATaGATTCCTCTTCTCCGCTGT +
Preference number: 4 (lower is better)
Translates to: HRVMGLSSGSGVLIRGLSGCYTS*IPLLRC
Trigger: ACAGCGGAGAAGAGGAATTCATGAAGTATAACAGCC...ACTGAGTCCTCTGATGAGCACTCCTGACCCAGAGCTGAGACCCATCACTCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR TCA 90 bp AACGAGCCCTTCCTGTCAACAGGGATGGGGCAAAAAGACTTTGTTCCAGTGGCCGGACGAAGGATGGATTaGCTCTTTTCTCGAAGTCGT +
Preference number: 4 (lower is better)
Translates to: NEPFLSTGMGQKDFVPVAGRRMD*LFSRSR
Trigger: ACGACTTCGAGAAAAGAGTCAATCCATCCTTCGTCC...GGCCACTGGAACAAAGTCTTTTTGCCCCATCCCTGTTGACAGGAAGGGCTCGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR GCA 90 bp CTTCCTGTCAACAGGGATGGGGCAAAAAGACTTTGTTCCAGTGGCCACGTGGAACGCTCTGTAGTCCTTTaGGATTTCAGCCGACTTCCA +
Preference number: 4 (lower is better)
Translates to: LPVNRDGAKRLCSSGHVERSVVL*DFSRLP
Trigger: TGGAAGTCGGCTGAAATCGCAAAGGACTACAGAGCG...TTCCACGTGGCCACTGGAACAAAGTCTTTTTGCCCCATCCCTGTTGACAGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR GCA 90 bp CCCCAGAGAGGACCATTCTGTGGTGTCACAGCTACTGCCTGTGACCATCAGACTGATGAGTTTGGACTCTaGGAAGCGGATTCTGAGATT +
Preference number: 4 (lower is better)
Translates to: PQRGPFCGVTATACDHQTDEFGL*EADSEI
Trigger: AATCTCAGAATCCGCTTCGCAGAGTCCAAACTCATC...AGTCTGATGGTCACAGGCAGTAGCTGTGACACCACAGAATGGTCCTCTCTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR GCA 90 bp TGGAATTCTTTCCTAGAAGGTGTAGGCATGGAACTCAACTGTGGCTTCATACATCCCACCGTGGTGACCTaGACATTGCCCAGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: WNSFLEGVGMELNCGFIHPTVVT*TLPRCR
Trigger: CCTGCACCTGGGCAATGTGCAGGTCACCACGGTGGG...ATGTATGAAGCCACAGTTGAGTTCCATGCCTACACCTTCTAGGAAAGAATTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR GCA 90 bp CACAGAGTGATGGGTCTCAGCTCTGGGTCAGGAGTGCTCATCAGAGGACTCAGTACACCAATAAAAGTGTaGTGCTTGCCTGAGAAGTGC +
Preference number: 4 (lower is better)
Translates to: HRVMGLSSGSGVLIRGLSTPIKV*CLPEKC
Trigger: GCACTTCTCAGGCAAGCAGCACACTTTTATTGGTGT...ACTGAGTCCTCTGATGAGCACTCCTGACCCAGAGCTGAGACCCATCACTCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR GCA 90 bp AGCCACTTGAGATCAGAAGCAAGAGCCTTTCCCAGCCCAGCCGGTTGCAAAGCACCAGCAACTCCAAAATaGCCATTTTTGCCTCGATCA +
Preference number: 4 (lower is better)
Translates to: SHLRSEARAFPSPAGCKAPATPK*PFLPRS
Trigger: TGATCGAGGCAAAAATGGGCATTTTGGAGTTGCTGG...TGCTTTGCAACCGGCTGGGCTGGGAAAGGCTCTTGCTTCTGATCTCAAGTGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR GCA 90 bp TGCACACGTGTGCATGTGTGGTGCTGGGGCCAAACCCAGGGCCAACTGCTCTACCTTGATGACCTGCTTTaGAGATTTAACTGTGATCAT +
Preference number: 4 (lower is better)
Translates to: CTRVHVWCWGQTQGQLLYLDDLL*RFNCDH
Trigger: ATGATCACAGTTAAATCTGCAAAGCAGGTCATCAAG...GTAGAGCAGTTGGCCCTGGGTTTGGCCCCAGCACCACACATGCACACGTGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR GCA 90 bp ATCCTCCTGAGTGCTGGGATTCTAGTTATGGGTTACCATGACCTGCTCTTAGACTCCTGGATGAGCCTGTaGAGAACCACCTTGCACACC +
Preference number: 4 (lower is better)
Translates to: ILLSAGILVMGYHDLLLDSWMSL*RTTLHT
Trigger: GGTGTGCAAGGTGGTTCTGCACAGGCTCATCCAGGA...GTCTAAGAGCAGGTCATGGTAACCCATAACTAGAATCCCAGCACTCAGGAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR GCA 90 bp ATCCTCCTGAGTGCTGGGATTCTAGTTATGGGTTACCATGACCTGCTCTTAGACTCTGCTCGCTCTCTCTaGAGCTCCAGCTCTGCATTG +
Preference number: 4 (lower is better)
Translates to: ILLSAGILVMGYHDLLLDSARSL*SSSSAL
Trigger: CAATGCAGAGCTGGAGCTGCAGAGAGAGCGAGCAGA...GTCTAAGAGCAGGTCATGGTAACCCATAACTAGAATCCCAGCACTCAGGAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR GCA 90 bp TGCACACGTGTGCATGTGTGGTGCTGGGGCCAAACCCAGGGCCAACTGCTCTACTCAAGAACTAGTCTTTaGTGTTCTTCTTTCTGCACA +
Preference number: 4 (lower is better)
Translates to: CTRVHVWCWGQTQGQLLYSRTSL*CSSFCT
Trigger: TGTGCAGAAAGAAGAACAGCAAAGACTAGTTCTTGA...GTAGAGCAGTTGGCCCTGGGTTTGGCCCCAGCACCACACATGCACACGTGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR GCA 90 bp GAAGGTGTAGGCATGGAACTCAACTGTGGCTTCATACATGTCTCTGCACTTCACGCTTCAGGCCGGAAATaGCCTGCAGGCTCTCATACT +
Preference number: 4 (lower is better)
Translates to: EGVGMELNCGFIHVSALHASGRK*PAGSHT
Trigger: AGTATGAGAGCCTGCAGGGCATTTCCGGCCTGAAGC...GTGAAGTGCAGAGACATGTATGAAGCCACAGTTGAGTTCCATGCCTACACCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CCA 90 bp ATCTCTGGTCTCATCCTCCTGAGTGCTGGGATTCTAGTTATGGGTTACCATGACCCTGAGGCCTGGTCATaGGCTTTACCACAGTTTCCG +
Preference number: 4 (lower is better)
Translates to: ISGLILLSAGILVMGYHDPEAWS*ALPQFP
Trigger: CGGAAACTGTGGTAAAGCCCATGACCAGGCCTCAGG...GTCATGGTAACCCATAACTAGAATCCCAGCACTCAGGAGGATGAGACCAGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CCA 90 bp AGCCACTTGAGATCAGAAGCAAGAGCCTTTCCCAGCCCAGCCGGTTGCAAAGCAGAAAATGGCAAGTGTTaGAAAGCCAGAAGGACAGCA +
Preference number: 4 (lower is better)
Translates to: SHLRSEARAFPSPAGCKAENGKC*KARRTA
Trigger: TGCTGTCCTTCTGGCTTTCCAACACTTGCCATTTTC...TGCTTTGCAACCGGCTGGGCTGGGAAAGGCTCTTGCTTCTGATCTCAAGTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CCA 90 bp TCCTGTATATATGTGGGTGAGGGGAGGTCCCTGCCACAAAACAAAGGTACCAGGGGCCGTTCTGACACATaGTGCTGTAGAAGTAGCTCA +
Preference number: 4 (lower is better)
Translates to: SCIYVGEGRSLPQNKGTRGRSDT*CCRSSS
Trigger: TGAGCTACTTCTACAGCACCATGTGTCAGAACGGCC...CCTGGTACCTTTGTTTTGTGGCAGGGACCTCCCCTCACCCACATATATACAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CCA 90 bp GGCCACGTGGAATTCTTTCCTAGAAGGTGTAGGCATGGAACTCAACTGTGGCTTACTGGGCGATCTCCTTaGCATCACTGTCTGTGGTCT +
Preference number: 4 (lower is better)
Translates to: GHVEFFPRRCRHGTQLWLTGRSP*HHCLWS
Trigger: AGACCACAGACAGTGATGCCAAGGAGATCGCCCAGT...AAGCCACAGTTGAGTTCCATGCCTACACCTTCTAGGAAAGAATTCCACGTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
3UTR CAA 72 bp CAAAACCGAGCCTTCAGGAATTGCAACAATAGCCACTaGAGATCAGAAGCAAGAGCCTTTCCCAGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: QNRAFRNCNNSH*RSEARAFPSPA
Trigger: GGCTGGGCTGGGAAAGGCTCTTGCTTCTGATCTCAAGTGGCTATTGTTGCAATTCCTGAAGGCTCGGTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
3UTR CAA 72 bp CTGCGGAACTTGTTCCCAACAGTGGTCCGGAAGTGCTaGGTGTTCGGCTTGATGACCTGCTTTGCAGATTTA +
Preference number: 4 (lower is better)
Translates to: LRNLFPTVVRKC*VFGLMTCFADL
Trigger: TAAATCTGCAAAGCAGGTCATCAAGCCGAACACCAAGCACTTCCGGACCACTGTTGGGAACAAGTTCCGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
CDS-3UTR TCA 90 bp GGCCACGTGGAATTCTTTCCTAGAAGGTGTAGGCATGGAACTCAACTGTGGCTTCACTGTAGGTGTAGATaGGTTTGGACTCTGCGAAGC +
Preference number: 4 (lower is better)
Translates to: GHVEFFPRRCRHGTQLWLHCRCR*VWTLRS
Trigger: GCTTCGCAGAGTCCAAACTCATCTACACCTACAGTG...AAGCCACAGTTGAGTTCCATGCCTACACCTTCTAGGAAAGAATTCCACGTGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR TCA 90 bp AGATCAGAAGCAAGAGCCTTTCCCAGCCCAGCCGGTTGCAAAGCATCATGGGAGTCATATTGGCGCCAATaGTCTGGTTTCTCTCATCAA +
Preference number: 4 (lower is better)
Translates to: RSEARAFPSPAGCKASWESYWRQ*SGFSHQ
Trigger: TTGATGAGAGAAACCAGATCATTGGCGCCAATATGA...CTCCCATGATGCTTTGCAACCGGCTGGGCTGGGAAAGGCTCTTGCTTCTGATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR TCA 90 bp ATCTCTGGTCTCATCCTCCTGAGTGCTGGGATTCTAGTTATGGGTTACCATGACGACTGTCATCCTCACTaGCTGAAGACCTCTCGTTGC +
Preference number: 4 (lower is better)
Translates to: ISGLILLSAGILVMGYHDDCHPH*LKTSRC
Trigger: GCAACGAGAGGTCTTCAGTCAGTGAGGATGACAGTC...GTCATGGTAACCCATAACTAGAATCCCAGCACTCAGGAGGATGAGACCAGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR GCA 90 bp TCTGGGACAATGGTGACAAGCAGGCTGTGGAGAGGCCATACCATGTTTTCTGATCGCTCTGTAGTCCTTTaGGATTTCAGCCGACTTCCA +
Preference number: 4 (lower is better)
Translates to: SGTMVTSRLWRGHTMFSDRSVVL*DFSRLP
Trigger: TGGAAGTCGGCTGAAATCGCAAAGGACTACAGAGCG...ATCAGAAAACATGGTATGGCCTCTCCACAGCCTGCTTGTCACCATTGTCCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
CDS-3UTR GCA 90 bp AAAACGCCACAGGCTCGCAGCTGCTGGACAATCCGCTTGGAGTCAAACTCAAAGAGTTATGGGATTGGATaGCAAGACTTTGTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: KTPQARSCWTIRLESNSKSYGIG*QDFVLH
Trigger: GTGGAGGACAAAGTCTTGGCATCCAATCCCATAACT...CTTTGAGTTTGACTCCAAGCGGATTGTCCAGCAGCTGCGAGCCTGTGGCGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
CDS-3UTR GCA 90 bp AGCCACTTGAGATCAGAAGCAAGAGCCTTTCCCAGCCCAGCCGGTTGCAAAGCATCACAATTTTTCTGTTaGACAGCCACTGAGCCACTT +
Preference number: 4 (lower is better)
Translates to: SHLRSEARAFPSPAGCKASQFFC*TATEPL
Trigger: AAGTGGCTCAGTGGCTGTGCAACAGAAAAATTGTGA...TGCTTTGCAACCGGCTGGGCTGGGAAAGGCTCTTGCTTCTGATCTCAAGTGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR GCA 90 bp GTTGCAAAGCATCATGGGAGACAGGTGGGGCGTGGTTTTTCCTCAAATTGCAACCTTCTGCAGGATCACTaGCTTGTGCTCCTGCAACAA +
Preference number: 4 (lower is better)
Translates to: VAKHHGRQVGRGFSSNCNLLQDH*LVLLQQ
Trigger: TTGTTGCAGGAGCACAAGGCAGTGATCCTGCAGAAG...GTTGCAATTTGAGGAAAAACCACGCCCCACCTGTCTCCCATGATGCTTTGCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR GCA 90 bp AGCTCTGGGTCAGGAGTGCTCATCAGAGGACTCAGTTCTCTGAAGGGAAGGAAATCTCTGAACAGCTTCTaGAGGTGGTTGATCTCTTGG +
Preference number: 4 (lower is better)
Translates to: SSGSGVLIRGLSSLKGRKSLNSF*RWLISW
Trigger: CCAAGAGATCAACCACCTGCAGAAGCTGTTCAGAGA...TTTCCTTCCCTTCAGAGAACTGAGTCCTCTGATGAGCACTCCTGACCCAGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR GCA 90 bp GTTGCAAAGCATCATGGGAGACAGGTGGGGCGTGGTTTTTCCTCAAATTGCAACTCTATCTTCTCAGCCTaGTCCTTCAGGCGGGATTCA +
Preference number: 4 (lower is better)
Translates to: VAKHHGRQVGRGFSSNCNSIFSA*SFRRDS
Trigger: TGAATCCCGCCTGAAGGAGCAGGCTGAGAAGATAGA...GTTGCAATTTGAGGAAAAACCACGCCCCACCTGTCTCCCATGATGCTTTGCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CCA 90 bp ATGGGTCTCAGCTCTGGGTCAGGAGTGCTCATCAGAGGACTCAGTTCTCTGAAGCAACAGCCTCAGTTATaGGATTGGATGCCAAGACTT +
Preference number: 4 (lower is better)
Translates to: MGLSSGSGVLIRGLSSLKQQPQL*DWMPRL
Trigger: AAGTCTTGGCATCCAATCCCATAACTGAGGCTGTTG...CTTCAGAGAACTGAGTCCTCTGATGAGCACTCCTGACCCAGAGCTGAGACCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CCA 90 bp AAAACGCCACAGGCTCGCAGCTGCTGGACAATCCGCTTGGAGTCAAACTCAAAGCAACAGCCTCAGTTATaGGATTGGATGCCAAGACTT +
Preference number: 4 (lower is better)
Translates to: KTPQARSCWTIRLESNSKQQPQL*DWMPRL
Trigger: AAGTCTTGGCATCCAATCCCATAACTGAGGCTGTTG...CTTTGAGTTTGACTCCAAGCGGATTGTCCAGCAGCTGCGAGCCTGTGGCGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
CDS-3UTR CCA 90 bp ATGGGTCTCAGCTCTGGGTCAGGAGTGCTCATCAGAGGACTCAGTTCTCTGAAGTTGGCGCCAATGATCTaGTTTCTCTCATCAAAGCTG +
Preference number: 4 (lower is better)
Translates to: MGLSSGSGVLIRGLSSLKLAPMI*FLSSKL
Trigger: CAGCTTTGATGAGAGAAACCAGATCATTGGCGCCAA...CTTCAGAGAACTGAGTCCTCTGATGAGCACTCCTGACCCAGAGCTGAGACCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
3UTR CAA 72 bp CTCTTCTCTGAACAGCTTCTGCAGGTGGTTGATCTCTaGGCTCAGGTGCACGACTTTGAAGTTCAGACCTTC +
Preference number: 4 (lower is better)
Translates to: LFSEQLLQVVDL*AQVHDFEVQTF
Trigger: GAAGGTCTGAACTTCAAAGTCGTGCACCTGAGCCAAGAGATCAACCACCTGCAGAAGCTGTTCAGAGAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
CDS-3UTR TCA 90 bp TCTCTTAAGTTTAAACAGGCCTCTGAGGCCCAAACACACAGAATACCTCACTGTCGCTGTAGGCGTGGATaGTGGCATCCCCGTATATTG +
Preference number: 4 (lower is better)
Translates to: SLKFKQASEAQTHRIPHCRCRRG*WHPRIL
Trigger: CAATATACGGGGATGCCATCATCCACGCCTACAGCG...ACAGTGAGGTATTCTGTGTGTTTGGGCCTCAGAGGCCTGTTTAAACTTAAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
CDS-3UTR TCA 90 bp AAAACGCCACAGGCTCGCAGCTGCTGGACAATCCGCTTGGAGTCAAACTCAAAGTCATATTGGCGCCAATaGTCTGGTTTCTCTCATCAA +
Preference number: 4 (lower is better)
Translates to: KTPQARSCWTIRLESNSKSYWRQ*SGFSHQ
Trigger: TTGATGAGAGAAACCAGATCATTGGCGCCAATATGA...CTTTGAGTTTGACTCCAAGCGGATTGTCCAGCAGCTGCGAGCCTGTGGCGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
CDS-3UTR TCA 90 bp ATCCTCCTGAGTGCTGGGATTCTAGTTATGGGTTACCATGACCTGCTCTTAGACCTGATGTCAGCCTGGTaGCTTCATGCCGGATACTTT +
Preference number: 4 (lower is better)
Translates to: ILLSAGILVMGYHDLLLDLMSAW*LHAGYF
Trigger: AAAGTATCCGGCATGAAGTCACCAGGCTGACATCAG...GTCTAAGAGCAGGTCATGGTAACCCATAACTAGAATCCCAGCACTCAGGAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR TCA 90 bp GGTGACCGCAAGGCACCGTGGATAAGAAAGCATGTGTATGTGTGTATCCTGAAACGAGGTGCTGGGAATTaGACTCATGACCTGAAAGAC +
Preference number: 4 (lower is better)
Translates to: GDRKAPWIRKHVYVCILKRGAGN*THDLKD
Trigger: GTCTTTCAGGTCATGAGTTCAATTCCCAGCACCTCG...TTTCAGGATACACACATACACATGCTTTCTTATCCACGGTGCCTTGCGGTCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
CDS-3UTR GCA 90 bp GATCAGGTCAATAACAGGCTGGTTGTCATAGAAGTCTATCAGAGTCCAGGGGATGGTATTCCAGCTCCATaGCATCCTCCAGCAGAAGTC +
Preference number: 4 (lower is better)
Translates to: DQVNNRLVVIEVYQSPGDGIPAP*HPPAEV
Trigger: GACTTCTGCTGGAGGATGGCATGGAGCTGGAATACC...ATCCCCTGGACTCTGATAGACTTCTATGACAACCAGCCTGTTATTGACCTGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
CDS-3UTR GCA 90 bp AGCTCTGGGTCAGGAGTGCTCATCAGAGGACTCAGTTCTCTGAAGGGAAGGAAAAGTTATGGGATTGGATaGCAAGACTTTGTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: SSGSGVLIRGLSSLKGRKSYGIG*QDFVLH
Trigger: GTGGAGGACAAAGTCTTGGCATCCAATCCCATAACT...TTTCCTTCCCTTCAGAGAACTGAGTCCTCTGATGAGCACTCCTGACCCAGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR GCA 90 bp CTTCCTGTCAACAGGGATGGGGCAAAAAGACTTTGTTCCAGTGGCCACGTGGAAAACGCCTGGTTGATTTaGTCGACAATGAAGTCGAAC +
Preference number: 4 (lower is better)
Translates to: LPVNRDGAKRLCSSGHVENAWLI*STMKSN
Trigger: GTTCGACTTCATTGTCGAGCAAATCAACCAGGCGTT...TTCCACGTGGCCACTGGAACAAAGTCTTTTTGCCCCATCCCTGTTGACAGGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR GCA 90 bp GGCCACGTGGAATTCTTTCCTAGAAGGTGTAGGCATGGAACTCAACTGTGGCTTTGTGCAGAACCACCTTaGACACCTCCTTCTTATCAC +
Preference number: 4 (lower is better)
Translates to: GHVEFFPRRCRHGTQLWLCAEPP*TPPSYH
Trigger: GTGATAAGAAGGAGGTGTGCAAGGTGGTTCTGCACA...AAGCCACAGTTGAGTTCCATGCCTACACCTTCTAGGAAAGAATTCCACGTGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR GCA 90 bp CCCCAGAGAGGACCATTCTGTGGTGTCACAGCTACTGCCTGTGACCATCAGACTGTAAGCCACTTGTCCTaGTCTGAAGAAAATTTTGGT +
Preference number: 4 (lower is better)
Translates to: PQRGPFCGVTATACDHQTVSHLS*SEENFG
Trigger: ACCAAAATTTTCTTCAGAGCAGGACAAGTGGCTTAC...AGTCTGATGGTCACAGGCAGTAGCTGTGACACCACAGAATGGTCCTCTCTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR GCA 90 bp GGCCACGTGGAATTCTTTCCTAGAAGGTGTAGGCATGGAACTCAACTGTGGCTTAGCCTGGTGACTTCATaGCGGATACTTTCGTTGATG +
Preference number: 4 (lower is better)
Translates to: GHVEFFPRRCRHGTQLWLSLVTS*RILSLM
Trigger: CATCAACGAAAGTATCCGGCATGAAGTCACCAGGCT...AAGCCACAGTTGAGTTCCATGCCTACACCTTCTAGGAAAGAATTCCACGTGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR GCA 90 bp AGCTCTGGGTCAGGAGTGCTCATCAGAGGACTCAGTTCTCTGAAGGGAAGGAAATCCAGCTCTGAAATCTaGTGCTTAAAGTCTGGGATC +
Preference number: 4 (lower is better)
Translates to: SSGSGVLIRGLSSLKGRKSSSEI*CLKSGI
Trigger: GATCCCAGACTTTAAGCAGCAGATTTCAGAGCTGGA...TTTCCTTCCCTTCAGAGAACTGAGTCCTCTGATGAGCACTCCTGACCCAGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CCA 90 bp TCCTGTATATATGTGGGTGAGGGGAGGTCCCTGCCACAAAACAAAGGTACCAGGGATTTCTATTGTTCCTaGCCATCTGCTTGTAGGCCT +
Preference number: 4 (lower is better)
Translates to: SCIYVGEGRSLPQNKGTRDFYCS*PSACRP
Trigger: AGGCCTACAAGCAGATGGCCAGGAACAATAGAAATC...CCTGGTACCTTTGTTTTGTGGCAGGGACCTCCCCTCACCCACATATATACAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CCA 90 bp ATCCTCCTGAGTGCTGGGATTCTAGTTATGGGTTACCATGACCTGCTCTTAGACTGGCATCACTGTCTGTaGTCTTCTTCACCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: ILLSAGILVMGYHDLLLDWHHCL*SSSPAA
Trigger: TGCTGCAGGTGAAGAAGACCACAGACAGTGATGCCA...GTCTAAGAGCAGGTCATGGTAACCCATAACTAGAATCCCAGCACTCAGGAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
3UTR CAA 72 bp TTCCCAACAGTGGTCCGGAAGTGCTTGGTGTTCGGCTaGATGACCTGCTTTGCAGATTTAACTGTGATCATC +
Preference number: 4 (lower is better)
Translates to: FPTVVRKCLVFG*MTCFADLTVII
Trigger: GATGATCACAGTTAAATCTGCAAAGCAGGTCATCAAGCCGAACACCAAGCACTTCCGGACCACTGTTGGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
CDS-3UTR TCA 90 bp GATCAGGTCAATAACAGGCTGGTTGTCATAGAAGTCTATCAGAGTCCAGGGGATCACTGTAGGTGTAGATaGGTTTGGACTCTGCGAAGC +
Preference number: 4 (lower is better)
Translates to: DQVNNRLVVIEVYQSPGDHCRCR*VWTLRS
Trigger: GCTTCGCAGAGTCCAAACTCATCTACACCTACAGTG...ATCCCCTGGACTCTGATAGACTTCTATGACAACCAGCCTGTTATTGACCTGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
CDS-3UTR TCA 90 bp GGCCACGTGGAATTCTTTCCTAGAAGGTGTAGGCATGGAACTCAACTGTGGCTTAAGGTGTTTAAATTCTaGCTGCTGTGCGGATGCACA +
Preference number: 4 (lower is better)
Translates to: GHVEFFPRRCRHGTQLWLKVFKF*LLCGCT
Trigger: TGTGCATCCGCACAGCAGTCAGAATTTAAACACCTT...AAGCCACAGTTGAGTTCCATGCCTACACCTTCTAGGAAAGAATTCCACGTGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR GCA 90 bp ATGGGTCTCAGCTCTGGGTCAGGAGTGCTCATCAGAGGACTCAGTTCTCTGAAGTGCAGGTTAAACTGCTaGTGTAGTTTTTCATTAGCG +
Preference number: 4 (lower is better)
Translates to: MGLSSGSGVLIRGLSSLKCRLNC*CSFSLA
Trigger: CGCTAATGAAAAACTACAGCAGCAGTTTAACCTGCA...CTTCAGAGAACTGAGTCCTCTGATGAGCACTCCTGACCCAGAGCTGAGACCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR GCA 90 bp CGAGCCCTTCCTGTCAACAGGGATGGGGCAAAAAGACTTTGTTCCAGTGGCCACACGTGCAGGTTAAACTaGTGCTGTAGTTTTTCATTA +
Preference number: 4 (lower is better)
Translates to: RALPVNRDGAKRLCSSGHTCRLN*CCSFSL
Trigger: TAATGAAAAACTACAGCAGCAGTTTAACCTGCACGT...GTGGCCACTGGAACAAAGTCTTTTTGCCCCATCCCTGTTGACAGGAAGGGCTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR GCA 90 bp TCCTGTATATATGTGGGTGAGGGGAGGTCCCTGCCACAAAACAAAGGTACCAGGTTCGGCTTGATGACCTaGTTTGCAGATTTAACTGTG +
Preference number: 4 (lower is better)
Translates to: SCIYVGEGRSLPQNKGTRFGLMT*FADLTV
Trigger: CACAGTTAAATCTGCAAAGCAGGTCATCAAGCCGAA...CCTGGTACCTTTGTTTTGTGGCAGGGACCTCCCCTCACCCACATATATACAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR GCA 90 bp CCAAACCCAGGGCCAACTGCTCTACCACTGAGTTCTGACCCCAGAGATAAATGTTGCTGTTCTTCTTTCTaGACATCATCAAACAGCTGC +
Preference number: 4 (lower is better)
Translates to: PNPGPTALPLSSDPRDKCCCSSF*TSSNSC
Trigger: GCAGCTGTTTGATGATGTGCAGAAAGAAGAACAGCA...ACATTTATCTCTGGGGTCAGAACTCAGTGGTAGAGCAGTTGGCCCTGGGTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR GCA 90 bp CCAAACCCAGGGCCAACTGCTCTACCACTGAGTTCTGACCCCAGAGATAAATGTTTCTGTGACTGCACGTaGTTTTCCACATCTATCTTC +
Preference number: 4 (lower is better)
Translates to: PNPGPTALPLSSDPRDKCFCDCT*FSTSIF
Trigger: GAAGATAGATGTGGAAAAGCACGTGCAGTCACAGAA...ACATTTATCTCTGGGGTCAGAACTCAGTGGTAGAGCAGTTGGCCCTGGGTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR GCA 90 bp TCCTGTATATATGTGGGTGAGGGGAGGTCCCTGCCACAAAACAAAGGTACCAGGTCTTCTCCGCTGTACTaGTTCAGGCAGTTAAGAAAA +
Preference number: 4 (lower is better)
Translates to: SCIYVGEGRSLPQNKGTRSSPLY*FRQLRK
Trigger: TTTTCTTAACTGCCTGAAGCAGTACAGCGGAGAAGA...CCTGGTACCTTTGTTTTGTGGCAGGGACCTCCCCTCACCCACATATATACAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR GCA 90 bp CGAGCCCTTCCTGTCAACAGGGATGGGGCAAAAAGACTTTGTTCCAGTGGCCACTTGGCTAAGCTACTCTaGACATTCTTATCTTTTAGC +
Preference number: 4 (lower is better)
Translates to: RALPVNRDGAKRLCSSGHLAKLL*TFLSFS
Trigger: GCTAAAAGATAAGAATGTGCAGAGTAGCTTAGCCAA...GTGGCCACTGGAACAAAGTCTTTTTGCCCCATCCCTGTTGACAGGAAGGGCTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CCA 90 bp GAAGGTGTAGGCATGGAACTCAACTGTGGCTTCATACATGTCTCTGCACTTCACTCCACATCTATCTTCTaGGCTTGCAGCAGCTCTATC +
Preference number: 4 (lower is better)
Translates to: EGVGMELNCGFIHVSALHSTSIF*ACSSSI
Trigger: GATAGAGCTGCTGCAAGCCCAGAAGATAGATGTGGA...GTGAAGTGCAGAGACATGTATGAAGCCACAGTTGAGTTCCATGCCTACACCTTC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CCA 90 bp CGAGCCCTTCCTGTCAACAGGGATGGGGCAAAAAGACTTTGTTCCAGTGGCCACGTTCTTATTCTGCTGTaGGCTGTTATACTTCATGAA +
Preference number: 4 (lower is better)
Translates to: RALPVNRDGAKRLCSSGHVLILL*AVILHE
Trigger: TTCATGAAGTATAACAGCCCACAGCAGAATAAGAAC...GTGGCCACTGGAACAAAGTCTTTTTGCCCCATCCCTGTTGACAGGAAGGGCTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR TCA 90 bp CTTCCTGTCAACAGGGATGGGGCAAAAAGACTTTGTTCCAGTGGCCACGTGGAATTCTCTCATCAAAGCTaGTCTCTGTGTATTTCCCAA +
Preference number: 4 (lower is better)
Translates to: LPVNRDGAKRLCSSGHVEFSHQS*SLCISQ
Trigger: TTGGGAAATACACAGAGATCAGCTTTGATGAGAGAA...TTCCACGTGGCCACTGGAACAAAGTCTTTTTGCCCCATCCCTGTTGACAGGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR TCA 90 bp TGGAATTCTTTCCTAGAAGGTGTAGGCATGGAACTCAACTGTGGCTTCATACATCTGCTTGGTGACCTCTaGCATCCGTTCTCTCATCTC +
Preference number: 4 (lower is better)
Translates to: WNSFLEGVGMELNCGFIHLLGDL*HPFSHL
Trigger: GAGATGAGAGAACGGATGTCAGAGGTCACCAAGCAG...ATGTATGAAGCCACAGTTGAGTTCCATGCCTACACCTTCTAGGAAAGAATTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR GCA 90 bp TGGAATTCTTTCCTAGAAGGTGTAGGCATGGAACTCAACTGTGGCTTCATACATGAGATTATGCAGCACTaGGGGCTCATGGAGGTAGCT +
Preference number: 4 (lower is better)
Translates to: WNSFLEGVGMELNCGFIHEIMQH*GLMEVA
Trigger: AGCTACCTCCATGAGCCCGCAGTGCTGCATAATCTC...ATGTATGAAGCCACAGTTGAGTTCCATGCCTACACCTTCTAGGAAAGAATTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR GCA 90 bp TGGAATTCTTTCCTAGAAGGTGTAGGCATGGAACTCAACTGTGGCTTCATACATCTGTGTCCCTGTATCTaGGGCCCTTCTCTTCATAGC +
Preference number: 4 (lower is better)
Translates to: WNSFLEGVGMELNCGFIHLCPCI*GPSLHS
Trigger: GCTATGAAGAGAAGGGCCGCAGATACAGGGACACAG...ATGTATGAAGCCACAGTTGAGTTCCATGCCTACACCTTCTAGGAAAGAATTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CCA 90 bp GTTGCAAAGCATCATGGGAGACAGGTGGGGCGTGGTTTTTCCTCAAATTGCAACCCTCGCACGTGTTTCTaGATCATAATACAATCCTGT +
Preference number: 4 (lower is better)
Translates to: VAKHHGRQVGRGFSSNCNPRTCF*IIIQSC
Trigger: ACAGGATTGTATTATGATCCAGAAACACGTGCGAGG...GTTGCAATTTGAGGAAAAACCACGCCCCACCTGTCTCCCATGATGCTTTGCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CCA 90 bp ATCCTCCTGAGTGCTGGGATTCTAGTTATGGGTTACCATGACCTGCTCTTAGACTTCCTCCTCAGCTTCTaGTTGCTTCTTTGGGAACTT +
Preference number: 4 (lower is better)
Translates to: ILLSAGILVMGYHDLLLDFLLSF*LLLWEL
Trigger: AAGTTCCCAAAGAAGCAACCAGAAGCTGAGGAGGAA...GTCTAAGAGCAGGTCATGGTAACCCATAACTAGAATCCCAGCACTCAGGAGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
3UTR CAA 72 bp AAGGTCTTCTGGGTCTCCACCATGTCAGCTCTGTCATaGACACCTTCAATGACAGTGTTACCTCCCATTCTT +
Preference number: 4 (lower is better)
Translates to: KVFWVSTMSALS*TPSMTVLPPIL
Trigger: AAGAATGGGAGGTAACACTGTCATTGAAGGTGTCAATGACAGAGCTGACATGGTGGAGACCCAGAAGACCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
CDS-3UTR TCA 90 bp ATCCTCCTGAGTGCTGGGATTCTAGTTATGGGTTACCATGACCTGCTCTTAGACCGTTCATTTTCTGACTaGAAGACAACTCTGGACTTC +
Preference number: 4 (lower is better)
Translates to: ILLSAGILVMGYHDLLLDRSFSD*KTTLDF
Trigger: GAAGTCCAGAGTTGTCTTTCAGTCAGAAAATGAACG...GTCTAAGAGCAGGTCATGGTAACCCATAACTAGAATCCCAGCACTCAGGAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR GCA 90 bp TCGCACGTGTTTCTGGATCATAATACAATCCTGTCTCAGTTTATCCAGGCGGAGGATGAGTTTGGACTCTaGGAAGCGGATTCTGAGATT +
Preference number: 4 (lower is better)
Translates to: SHVFLDHNTILSQFIQAEDEFGL*EADSEI
Trigger: AATCTCAGAATCCGCTTCGCAGAGTCCAAACTCATC...CTCCGCCTGGATAAACTGAGACAGGATTGTATTATGATCCAGAAACACGTGCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
CDS-3UTR CCA 90 bp GAAGGTGTAGGCATGGAACTCAACTGTGGCTTCATACATGTCTCTGCACTTCACTTGGTTCTACCAAACTaGTACTGGTTAGAATCCTGG +
Preference number: 4 (lower is better)
Translates to: EGVGMELNCGFIHVSALHLVLPN*YWLESW
Trigger: CCAGGATTCTAACCAGTACCAGTTTGGTAGAACCAA...GTGAAGTGCAGAGACATGTATGAAGCCACAGTTGAGTTCCATGCCTACACCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CCA 90 bp TGGAATTCTTTCCTAGAAGGTGTAGGCATGGAACTCAACTGTGGCTTCATACATGCTCCAGTGTCTCCTTaGCTAAGCTACTCTGCACAT +
Preference number: 4 (lower is better)
Translates to: WNSFLEGVGMELNCGFIHAPVSP*LSYSAH
Trigger: ATGTGCAGAGTAGCTTAGCCAAGGAGACACTGGAGC...ATGTATGAAGCCACAGTTGAGTTCCATGCCTACACCTTCTAGGAAAGAATTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR GCA 90 bp TGGAATTCTTTCCTAGAAGGTGTAGGCATGGAACTCAACTGTGGCTTCATACATCGTTCTGACACATGGTaGTGTAGAAGTAGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: WNSFLEGVGMELNCGFIHRSDTW*CRSSSA
Trigger: AGCTGAGCTACTTCTACAGCACCATGTGTCAGAACG...ATGTATGAAGCCACAGTTGAGTTCCATGCCTACACCTTCTAGGAAAGAATTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CCA 90 bp CTGGACAATCCGCTTGGAGTCAAACTCAAAGGGCATTTTCTCATCATTTGGCTTGATTTCTATTGTTCCTaGCCATCTGCTTGTAGGCCT +
Preference number: 4 (lower is better)
Translates to: LDNPLGVKLKGHFLIIWLDFYCS*PSACRP
Trigger: AGGCCTACAAGCAGATGGCCAGGAACAATAGAAATC...AAGCCAAATGATGAGAAAATGCCCTTTGAGTTTGACTCCAAGCGGATTGTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
CDS-3UTR CCA 90 bp ATCCTCCTGAGTGCTGGGATTCTAGTTATGGGTTACCATGACCTGCTCTTAGACCTTGAAAAAGATATTTaGTATCCAGCATCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: ILLSAGILVMGYHDLLLDLEKDI*YPASAV
Trigger: CACAGCTGATGCTGGATACCAAATATCTTTTTCAAG...GTCTAAGAGCAGGTCATGGTAACCCATAACTAGAATCCCAGCACTCAGGAGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
3UTR CAA 72 bp TTCTTCTCCAGGAACCCTTCACATTGGTACTCCACCTaGTCAGCAAAATGTTGGATGATGAAGGATGAGTTT +
Preference number: 4 (lower is better)
Translates to: FFSRNPSHWYST*SAKCWMMKDEF
Trigger: AAACTCATCCTTCATCATCCAACATTTTGCTGACAAGGTGGAGTACCAATGTGAAGGGTTCCTGGAGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
CDS-3UTR TCA 90 bp TGTTGGATGATGAAGGATGAGTTTGACATTCTAGGCTTCTCGAATAACGAGTTCATTGAACTCATGACCTaGAAGACAACTCTGGACTTC +
Preference number: 4 (lower is better)
Translates to: CWMMKDEFDILGFSNNEFIELMT*KTTLDF
Trigger: GAAGTCCAGAGTTGTCTTTCAGGTCATGAGTTCAAT...GAACTCGTTATTCGAGAAGCCTAGAATGTCAAACTCATCCTTCATCATCCAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
CDS GCA 90 bp TGCGGTTCGTGGATCGCACCCACCAGCCTCTCCTTCCCTTCTGGATaGATCTCACTCTGTGCTTCCACGGCCCTGCCCTGCATTCTCTCC +
Preference number: 5 (lower is better)
Translates to: CGSWIAPTSLSFPSG*ISLCASTALPCILS
Trigger: GGAGAGAATGCAGGGCAGGGCCGTGGAAGCACAGAGTGAGATGCATCCAGAAGGGAAGGAGAGGCTGGTGGGTGCGATCCACGAACCGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CAA 90 bp GGTGGTCAGGTTGCTAGGGGTGCACAGAGTGATGGGTCTCAGCTCTGGGTCAGGGTGGTCCGGAAGTGCTaGGTGTTCGGCTTGATGACC +
Preference number: 5 (lower is better)
Translates to: GGQVARGAQSDGSQLWVRVVRKC*VFGLMT
Trigger: GGTCATCAAGCCGAACACCAAGCACTTCCGGACCAC...CCTGACCCAGAGCTGAGACCCATCACTCTGTGCACCCCTAGCAACCTGACCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CAA 90 bp GGTGGTCAGGTTGCTAGGGGTGCACAGAGTGATGGGTCTCAGCTCTGGGTCAGGAGAGAGCTGCGGAACTaGTTCCCAACAGTGGTCCGG +
Preference number: 5 (lower is better)
Translates to: GGQVARGAQSDGSQLWVRRELRN*FPTVVR
Trigger: CCGGACCACTGTTGGGAACAAGTTCCGCAGCTCTCT...CCTGACCCAGAGCTGAGACCCATCACTCTGTGCACCCCTAGCAACCTGACCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS TCA 90 bp GTCATTCTCACCCACCAGGATGTCAGGGTTCCGAAGCGGAGGCAGTaGCCCTGGGTCAACAGGGTATTCCAGCTCCATGCCATCCTCCAG +
Preference number: 5 (lower is better)
Translates to: VILTHQDVRVPKRRQ*PWVNRVFQLHAILQ
Trigger: CTGGAGGATGGCATGGAGCTGGAATACCCTGTTGACCCAGGGTCACTGCCTCCGCTTCGGAACCCTGACATCCTGGTGGGTGAGAATGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036555.8
ENSMUST00000216788.2
CDS TCA 90 bp CAGGATGGACGTCATGGTGTAGGCATCTGTGTCGTCGATGCTGGATaGGCGCTTCCGGAAACCAGTGGGCTTCAGGCCGGAAATGCCCTG +
Preference number: 5 (lower is better)
Translates to: QDGRHGVGICVVDAG*ALPETSGLQAGNAL
Trigger: CAGGGCATTTCCGGCCTGAAGCCCACTGGTTTCCGGAAGCGCTCATCCAGCATCGACGACACAGATGCCTACACCATGACGTCCATCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS CCA 90 bp TTCATGCGGTTCGTGGATCGCACCCACCAGCCTCTCCTTCCCTTCTaGATGCATCTCACTCTGTGCTTCCACGGCCCTGCCCTGCATTCT +
Preference number: 5 (lower is better)
Translates to: FMRFVDRTHQPLLPF*MHLTLCFHGPALHS
Trigger: AGAATGCAGGGCAGGGCCGTGGAAGCACAGAGTGAGATGCATCCAGAAGGGAAGGAGAGGCTGGTGGGTGCGATCCACGAACCGCATGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CAA 90 bp GGTGGTCAGGTTGCTAGGGGTGCACAGAGTGATGGGTCTCAGCTCTGGGTCAGGCCGCTCTGTAGTCCTTaGCGATTTCAGCCGACTTCC +
Preference number: 5 (lower is better)
Translates to: GGQVARGAQSDGSQLWVRPLCSP*RFQPTS
Trigger: GGAAGTCGGCTGAAATCGCAAAGGACTACAGAGCGG...CCTGACCCAGAGCTGAGACCCATCACTCTGTGCACCCCTAGCAACCTGACCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CAA 90 bp GGTGGTCAGGTTGCTAGGGGTGCACAGAGTGATGGGTCTCAGCTCTGGGTCAGGTGGGGTGTGGTGGCATaGAGGGTTTCCATGAGCAAG +
Preference number: 5 (lower is better)
Translates to: GGQVARGAQSDGSQLWVRWGVVA*RVSMSK
Trigger: CTTGCTCATGGAAACCCTCAATGCCACCACACCCCA...CCTGACCCAGAGCTGAGACCCATCACTCTGTGCACCCCTAGCAACCTGACCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CAA 90 bp CACGTGTGCATGTGTGGTGCTGGGGCCAAACCCAGGGCCAACTGCTCTACCACTCTCCTCAGACTTCTCTaGCAGCATCTGCTCTGCTCG +
Preference number: 5 (lower is better)
Translates to: HVCMCGAGAKPRANCSTTLLRLL*QHLLCS
Trigger: CGAGCAGAGCAGATGCTGCAAGAGAAGTCTGAGGAG...AGTGGTAGAGCAGTTGGCCCTGGGTTTGGCCCCAGCACCACACATGCACACGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CAA 90 bp GAGGGTGGTCAGGTTGCTAGGGGTGCACAGAGTGATGGGTCTCAGCTCTGGGTCACTCAGAGATGGTCTTaGCCTGCTTGCTTAGGCGGG +
Preference number: 5 (lower is better)
Translates to: EGGQVARGAQSDGSQLWVTQRWS*PACLGG
Trigger: CCCGCCTAAGCAAGCAGGCAAAGACCATCTCTGAGT...GACCCAGAGCTGAGACCCATCACTCTGTGCACCCCTAGCAACCTGACCACCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CAA 90 bp CACGTGTGCATGTGTGGTGCTGGGGCCAAACCCAGGGCCAACTGCTCTACCACTGGCAGGTGCACATGGTaGGCTTTCTCAGTCGTCTTG +
Preference number: 5 (lower is better)
Translates to: HVCMCGAGAKPRANCSTTGRCTW*AFSVVL
Trigger: CAAGACGACTGAGAAAGCCAACCATGTGCACCTGCC...AGTGGTAGAGCAGTTGGCCCTGGGTTTGGCCCCAGCACCACACATGCACACGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS GCA 90 bp TTCCCTTCTGGATGCATCTCACTCTGTGCTTCCACGGCCCTGCCCTaGATTCTCTCCTCTTCTCGGATTCGGTTCAGGTGGCTGAACGGC +
Preference number: 5 (lower is better)
Translates to: FPSGCISLCASTALP*ILSSSRIRFRWLNG
Trigger: GCCGTTCAGCCACCTGAACCGAATCCGAGAAGAGGAGAGAATGCAGGGCAGGGCCGTGGAAGCACAGAGTGAGATGCATCCAGAAGGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CAA 90 bp CACGTGTGCATGTGTGGTGCTGGGGCCAAACCCAGGGCCAACTGCTCTACCACTCAGGTGGTTGATCTCTaGGCTCAGGTGCACGACTTT +
Preference number: 5 (lower is better)
Translates to: HVCMCGAGAKPRANCSTTQVVDL*AQVHDF
Trigger: AAAGTCGTGCACCTGAGCCAAGAGATCAACCACCTG...AGTGGTAGAGCAGTTGGCCCTGGGTTTGGCCCCAGCACCACACATGCACACGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS TCA 90 bp GGTCAACAGGGTATTCCAGCTCCATGCCATCCTCCAGCAGAAGTCTaGGGACTCGGTCACCCGCTCTGTAGTCCTTTGCGATTTCAGCCG +
Preference number: 5 (lower is better)
Translates to: GQQGIPAPCHPPAEV*GLGHPLCSPLRFQP
Trigger: CGGCTGAAATCGCAAAGGACTACAGAGCGGGTGACCGAGTCCTCAGACTTCTGCTGGAGGATGGCATGGAGCTGGAATACCCTGTTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036555.8
ENSMUST00000216788.2
CDS CCA 90 bp ACGGCCCTGCCCTGCATTCTCTCCTCTTCTCGGATTCGGTTCAGGTaGCTGAACGGCTCTTCCAGCTTTCCTTCTATCTTCTCAGCCTGC +
Preference number: 5 (lower is better)
Translates to: TALPCILSSSRIRFR*LNGSSSFPSIFSAC
Trigger: GCAGGCTGAGAAGATAGAAGGAAAGCTGGAAGAGCCGTTCAGCCACCTGAACCGAATCCGAGAAGAGGAGAGAATGCAGGGCAGGGCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CAA 90 bp GAGGGTGGTCAGGTTGCTAGGGGTGCACAGAGTGATGGGTCTCAGCTCTGGGTCATAAAAGTGTGCTGCTaGCCTGAGAAGTGCAACGCC +
Preference number: 5 (lower is better)
Translates to: EGGQVARGAQSDGSQLWVIKVCC*PEKCNA
Trigger: GGCGTTGCACTTCTCAGGCAAGCAGCACACTTTTAT...GACCCAGAGCTGAGACCCATCACTCTGTGCACCCCTAGCAACCTGACCACCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CAA 90 bp AGCCACTTGAGATCAGAAGCAAGAGCCTTTCCCAGCCCAGCCGGTTGCAAAGCACACTGGGCGATCTCCTaGGCATCACTGTCTGTGGTC +
Preference number: 5 (lower is better)
Translates to: SHLRSEARAFPSPAGCKAHWAIS*ASLSVV
Trigger: GACCACAGACAGTGATGCCAAGGAGATCGCCCAGTG...TGCTTTGCAACCGGCTGGGCTGGGAAAGGCTCTTGCTTCTGATCTCAAGTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS TCA 90 bp CCCTGCCCTGCATTCTCTCCTCTTCTCGGATTCGGTTCAGGTGGCTaGACGGCTCTTCCAGCTTTCCTTCTATCTTCTCAGCCTGCTCCT +
Preference number: 5 (lower is better)
Translates to: PCPAFSPLLGFGSGG*TALPAFLLSSQPAP
Trigger: AGGAGCAGGCTGAGAAGATAGAAGGAAAGCTGGAAGAGCCGTTCAGCCACCTGAACCGAATCCGAGAAGAGGAGAGAATGCAGGGCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CAA 90 bp CTTCTGCAAGCGCTGGACCCTGTAAGTCAGCTGAATGTTGAGCACGAACCTGCGCCGCTCTGTAGTCCTTaGCGATTTCAGCCGACTTCC +
Preference number: 5 (lower is better)
Translates to: LLQALDPVSQLNVEHEPAPLCSP*RFQPTS
Trigger: GGAAGTCGGCTGAAATCGCAAAGGACTACAGAGCGG...CGCAGGTTCGTGCTCAACATTCAGCTGACTTACAGGGTCCAGCGCTTGCAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
CDS-3UTR CAA 90 bp CTTCCTGTCAACAGGGATGGGGCAAAAAGACTTTGTTCCAGTGGCCACGTGGAAACCCCGGAAGTACCGTaGGATTGTCAGGGCAGCCTG +
Preference number: 5 (lower is better)
Translates to: LPVNRDGAKRLCSSGHVETPEVP*DCQGSL
Trigger: CAGGCTGCCCTGACAATCCAACGGTACTTCCGGGGT...TTCCACGTGGCCACTGGAACAAAGTCTTTTTGCCCCATCCCTGTTGACAGGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CAA 90 bp CACGTGTGCATGTGTGGTGCTGGGGCCAAACCCAGGGCCAACTGCTCTACCACTCTCAGGTGCACGACTTaGAAGTTCAGACCTTCAATC +
Preference number: 5 (lower is better)
Translates to: HVCMCGAGAKPRANCSTTLRCTT*KFRPSI
Trigger: GATTGAAGGTCTGAACTTCAAAGTCGTGCACCTGAG...AGTGGTAGAGCAGTTGGCCCTGGGTTTGGCCCCAGCACCACACATGCACACGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CAA 90 bp TCCTGTATATATGTGGGTGAGGGGAGGTCCCTGCCACAAAACAAAGGTACCAGGCGGAGAAAGCCGAGCTaGAAGCTGCTGGGGATCTGG +
Preference number: 5 (lower is better)
Translates to: SCIYVGEGRSLPQNKGTRRRKPS*KLLGIW
Trigger: CCAGATCCCCAGCAGCTTCAAGCTCGGCTTTCTCCG...CCTGGTACCTTTGTTTTGTGGCAGGGACCTCCCCTCACCCACATATATACAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS TCA 90 bp TACTCTCGACTTCCTCCTCAGCTTCTGGTTGCTTCTTTGGGAACTTaGTGGCTTCATGCGGTTCGTGGATCGCACCCACCAGCCTCTCCT +
Preference number: 5 (lower is better)
Translates to: YSRLPPQLLVASLGT*WLHAVRGSHPPASP
Trigger: AGGAGAGGCTGGTGGGTGCGATCCACGAACCGCATGAAGCCATCAAGTTCCCAAAGAAGCAACCAGAAGCTGAGGAGGAAGTCGAGAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS CCA 90 bp GCTTCTGGTTGCTTCTTTGGGAACTTGATGGCTTCATGCGGTTCGTaGATCGCACCCACCAGCCTCTCCTTCCCTTCTGGATGCATCTCA +
Preference number: 5 (lower is better)
Translates to: ASGCFFGNLMASCGS*IAPTSLSFPSGCIS
Trigger: TGAGATGCATCCAGAAGGGAAGGAGAGGCTGGTGGGTGCGATCCACGAACCGCATGAAGCCATCAAGTTCCCAAAGAAGCAACCAGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS CCA 90 bp TCCCCTCATCTTCTTTCTTGTATTCCAGCATCCCCAGGTACTCCCTaGATCCCGAGGGCAGGTGCACATGGTTGGCTTTCTCAGTCGTCT +
Preference number: 5 (lower is better)
Translates to: SPHLLSCIPASPGTP*IPRAGAHGWLSQSS
Trigger: AGACGACTGAGAAAGCCAACCATGTGCACCTGCCCTCGGGATCCAGGGAGTACCTGGGGATGCTGGAATACAAGAAAGAAGATGAGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CAA 90 bp AAAACGCCACAGGCTCGCAGCTGCTGGACAATCCGCTTGGAGTCAAACTCAAAGTCCTCCACATGGGCATaGCTGCTCGATTTGCTGACG +
Preference number: 5 (lower is better)
Translates to: KTPQARSCWTIRLESNSKSSTWA*LLDLLT
Trigger: CGTCAGCAAATCGAGCAGCAATGCCCATGTGGAGGA...CTTTGAGTTTGACTCCAAGCGGATTGTCCAGCAGCTGCGAGCCTGTGGCGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
CDS-3UTR CAA 90 bp AGCCACTTGAGATCAGAAGCAAGAGCCTTTCCCAGCCCAGCCGGTTGCAAAGCATGCTTGGTGTTCGGCTaGATGACCTGCTTTGCAGAT +
Preference number: 5 (lower is better)
Translates to: SHLRSEARAFPSPAGCKACLVFG*MTCFAD
Trigger: ATCTGCAAAGCAGGTCATCAAGCCGAACACCAAGCA...TGCTTTGCAACCGGCTGGGCTGGGAAAGGCTCTTGCTTCTGATCTCAAGTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CAA 90 bp ATCTCTGGTCTCATCCTCCTGAGTGCTGGGATTCTAGTTATGGGTTACCATGACATGGTCTTTGCCTGCTaGCTTAGGCGGGCCACCTCC +
Preference number: 5 (lower is better)
Translates to: ISGLILLSAGILVMGYHDMVFAC*LRRATS
Trigger: GGAGGTGGCCCGCCTAAGCAAGCAGGCAAAGACCAT...GTCATGGTAACCCATAACTAGAATCCCAGCACTCAGGAGGATGAGACCAGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CAA 90 bp AGCCACTTGAGATCAGAAGCAAGAGCCTTTCCCAGCCCAGCCGGTTGCAAAGCACCCTCATCTTCTTTCTaGTATTCCAGCATCCCCAGG +
Preference number: 5 (lower is better)
Translates to: SHLRSEARAFPSPAGCKAPSSSF*YSSIPR
Trigger: CCTGGGGATGCTGGAATACAAGAAAGAAGATGAGGG...TGCTTTGCAACCGGCTGGGCTGGGAAAGGCTCTTGCTTCTGATCTCAAGTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS TCA 90 bp GTCATCTCCAGGGCGTGTGGTGAGGCGGTGAAAGGAAATGTGACTTaGAAAAGATATTTGGTATCCAGCATCAGCTGTGCCGAGTCGCCC +
Preference number: 5 (lower is better)
Translates to: VISRACGEAVKGNVT*KRYLVSSISCAESP
Trigger: GGGCGACTCGGCACAGCTGATGCTGGATACCAAATATCTTTTTCAAGTCACATTTCCTTTCACCGCCTCACCACACGCCCTGGAGATGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CAA 90 bp GTTGCAAAGCATCATGGGAGACAGGTGGGGCGTGGTTTTTCCTCAAATTGCAACTCCTCCACATGGGCATaGCTGCTCGATTTGCTGACG +
Preference number: 5 (lower is better)
Translates to: VAKHHGRQVGRGFSSNCNSSTWA*LLDLLT
Trigger: CGTCAGCAAATCGAGCAGCAATGCCCATGTGGAGGA...GTTGCAATTTGAGGAAAAACCACGCCCCACCTGTCTCCCATGATGCTTTGCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CAA 90 bp AGCTCTGGGTCAGGAGTGCTCATCAGAGGACTCAGTTCTCTGAAGGGAAGGAAATGCTGGACAATCCGCTaGGAGTCAAACTCAAAGGGC +
Preference number: 5 (lower is better)
Translates to: SSGSGVLIRGLSSLKGRKCWTIR*ESNSKG
Trigger: GCCCTTTGAGTTTGACTCCAAGCGGATTGTCCAGCA...TTTCCTTCCCTTCAGAGAACTGAGTCCTCTGATGAGCACTCCTGACCCAGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CAA 90 bp GTTGCAAAGCATCATGGGAGACAGGTGGGGCGTGGTTTTTCCTCAAATTGCAACGGCTCCAGTGTCTCCTaGGCTAAGCTACTCTGCACA +
Preference number: 5 (lower is better)
Translates to: VAKHHGRQVGRGFSSNCNGSSVS*AKLLCT
Trigger: TGTGCAGAGTAGCTTAGCCAAGGAGACACTGGAGCC...GTTGCAATTTGAGGAAAAACCACGCCCCACCTGTCTCCCATGATGCTTTGCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS CCA 90 bp ACAGCCTCAGTTATGGGATTGGATGCCAAGACTTTGTCCTCCACATaGGCATTGCTGCTCGATTTGCTGACGGTAGCGAAGTACCTCATG +
Preference number: 5 (lower is better)
Translates to: TASVMGLDAKTLSST*ALLLDLLTVAKYLM
Trigger: CATGAGGTACTTCGCTACCGTCAGCAAATCGAGCAGCAATGCCCATGTGGAGGACAAAGTCTTGGCATCCAATCCCATAACTGAGGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036555.8
ENSMUST00000216788.2
CDS CCA 90 bp CTTCAGGCCGGAAATGCCCTGCAGGCTCTCATACTCCAGCATGCCTaGCACTATTATCGGCTGGAGGTTGTTTTCCATCACAATGATGAA +
Preference number: 5 (lower is better)
Translates to: LQAGNALQALILQHA*HYYRLEVVFHHNDE
Trigger: TTCATCATTGTGATGGAAAACAACCTCCAGCCGATAATAGTGCCAGGCATGCTGGAGTATGAGAGCCTGCAGGGCATTTCCGGCCTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CAA 90 bp CCAAACCCAGGGCCAACTGCTCTACCACTGAGTTCTGACCCCAGAGATAAATGTGCCTCAGTTATGGGATaGGATGCCAAGACTTTGTCC +
Preference number: 5 (lower is better)
Translates to: PNPGPTALPLSSDPRDKCASVMG*DAKTLS
Trigger: GGACAAAGTCTTGGCATCCAATCCCATAACTGAGGC...ACATTTATCTCTGGGGTCAGAACTCAGTGGTAGAGCAGTTGGCCCTGGGTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CAA 90 bp GGTCAGGTTGCTAGGGGTGCACAGAGTGATGGGTCTCAGCTCTGGGTCAGGAGTGCTCTGAAGAAAATTTaGGTTCTACCAAACTGGTAC +
Preference number: 5 (lower is better)
Translates to: GQVARGAQSDGSQLWVRSALKKI*VLPNWY
Trigger: GTACCAGTTTGGTAGAACCAAAATTTTCTTCAGAGC...ACTCCTGACCCAGAGCTGAGACCCATCACTCTGTGCACCCCTAGCAACCTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CAA 90 bp GGCCACGTGGAATTCTTTCCTAGAAGGTGTAGGCATGGAACTCAACTGTGGCTTCTCTCCAAAAGCTGCTaGGTGACCTCTGACATCCGT +
Preference number: 5 (lower is better)
Translates to: GHVEFFPRRCRHGTQLWLLSKSC*VTSDIR
Trigger: ACGGATGTCAGAGGTCACCAAGCAGCTTTTGGAGAG...AAGCCACAGTTGAGTTCCATGCCTACACCTTCTAGGAAAGAATTCCACGTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CAA 90 bp CCCCAGAGAGGACCATTCTGTGGTGTCACAGCTACTGCCTGTGACCATCAGACTTCTCCAGAACTCGAGTaGCTTTCTTTAGTCCTTCGT +
Preference number: 5 (lower is better)
Translates to: PQRGPFCGVTATACDHQTSPELE*LSLVLR
Trigger: ACGAAGGACTAAAGAAAGCAACTCGAGTTCTGGAGA...AGTCTGATGGTCACAGGCAGTAGCTGTGACACCACAGAATGGTCCTCTCTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CAA 90 bp ATCCTCCTGAGTGCTGGGATTCTAGTTATGGGTTACCATGACCTGCTCTTAGACAGCTTCTGCAGGTGGTaGATCTCTTGGCTCAGGTGC +
Preference number: 5 (lower is better)
Translates to: ILLSAGILVMGYHDLLLDSFCRW*ISWLRC
Trigger: GCACCTGAGCCAAGAGATCAACCACCTGCAGAAGCT...GTCTAAGAGCAGGTCATGGTAACCCATAACTAGAATCCCAGCACTCAGGAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CAA 90 bp AACGAGCCCTTCCTGTCAACAGGGATGGGGCAAAAAGACTTTGTTCCAGTGGCCAGAAAATGGCAAGTGTaGGAAAGCCAGAAGGACAGC +
Preference number: 5 (lower is better)
Translates to: NEPFLSTGMGQKDFVPVARKWQV*ESQKDS
Trigger: GCTGTCCTTCTGGCTTTCCAACACTTGCCATTTTCT...GGCCACTGGAACAAAGTCTTTTTGCCCCATCCCTGTTGACAGGAAGGGCTCGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CAA 90 bp AGCTCTGGGTCAGGAGTGCTCATCAGAGGACTCAGTTCTCTGAAGGGAAGGAAAAGAAGAGCCTGTACTTaGCGGACGAAGGATGGATTG +
Preference number: 5 (lower is better)
Translates to: SSGSGVLIRGLSSLKGRKRRACT*RTKDGL
Trigger: CAATCCATCCTTCGTCCGCAAAGTACAGGCTCTTCT...TTTCCTTCCCTTCAGAGAACTGAGTCCTCTGATGAGCACTCCTGACCCAGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS TCA 90 bp GAGCTTGAAGCTGCTGGGGATCTGGGTCATCTCCAGGGCGTGTGGTaGGGCGGTGAAAGGAAATGTGACTTGAAAAAGATATTTGGTATC +
Preference number: 5 (lower is better)
Translates to: ELEAAGDLGHLQGVW*GGERKCDLKKIFGI
Trigger: GATACCAAATATCTTTTTCAAGTCACATTTCCTTTCACCGCCTCACCACACGCCCTGGAGATGACCCAGATCCCCAGCAGCTTCAAGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS CCA 90 bp GGACGCTTCTTGTTGGAGAATACTCTCGACTTCCTCCTCAGCTTCTaGTTGCTTCTTTGGGAACTTGATGGCTTCATGCGGTTCGTGGAT +
Preference number: 5 (lower is better)
Translates to: GRFLLENTLDFLLSF*LLLWELDGFMRFVD
Trigger: ATCCACGAACCGCATGAAGCCATCAAGTTCCCAAAGAAGCAACCAGAAGCTGAGGAGGAAGTCGAGAGTATTCTCCAACAAGAAGCGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS CCA 90 bp TTAAGGATCTTTATGATCTGCACAGCAGACAGGGAAGTGCAACACTaGGCGATCTCCTTGGCATCACTGTCTGTGGTCTTCTTCACCTGC +
Preference number: 5 (lower is better)
Translates to: LRIFMICTADREVQH*AISLASLSVVFFTC
Trigger: GCAGGTGAAGAAGACCACAGACAGTGATGCCAAGGAGATCGCCCAGTGTTGCACTTCCCTGTCTGCTGTGCAGATCATAAAGATCCTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CAA 90 bp TGGAATTCTTTCCTAGAAGGTGTAGGCATGGAACTCAACTGTGGCTTCATACATGTGGTGACCTGCACATaGCCCAGGTGCAGGATGGCA +
Preference number: 5 (lower is better)
Translates to: WNSFLEGVGMELNCGFIHVVTCT*PRCRMA
Trigger: TGCCATCCTGCACCTGGGCAATGTGCAGGTCACCAC...ATGTATGAAGCCACAGTTGAGTTCCATGCCTACACCTTCTAGGAAAGAATTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CAA 90 bp CCAAACCCAGGGCCAACTGCTCTACCACTGAGTTCTGACCCCAGAGATAAATGTCAACGCCTGGTTGATTaGCTCGACAATGAAGTCGAA +
Preference number: 5 (lower is better)
Translates to: PNPGPTALPLSSDPRDKCQRLVD*LDNEVE
Trigger: TTCGACTTCATTGTCGAGCAAATCAACCAGGCGTTG...ACATTTATCTCTGGGGTCAGAACTCAGTGGTAGAGCAGTTGGCCCTGGGTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CAA 90 bp ATCTCTGGTCTCATCCTCCTGAGTGCTGGGATTCTAGTTATGGGTTACCATGACTGCAGGATCACTGCCTaGTGCTCCTGCAACAACTTC +
Preference number: 5 (lower is better)
Translates to: ISGLILLSAGILVMGYHDCRITA*CSCNNF
Trigger: GAAGTTGTTGCAGGAGCACAAGGCAGTGATCCTGCA...GTCATGGTAACCCATAACTAGAATCCCAGCACTCAGGAGGATGAGACCAGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CAA 90 bp GAAGGTGTAGGCATGGAACTCAACTGTGGCTTCATACATGTCTCTGCACTTCACAGCTCCAGCTCTGCATaGTGCTTCTGCAGCTTTGAC +
Preference number: 5 (lower is better)
Translates to: EGVGMELNCGFIHVSALHSSSSA*CFCSFD
Trigger: GTCAAAGCTGCAGAAGCACAATGCAGAGCTGGAGCT...GTGAAGTGCAGAGACATGTATGAAGCCACAGTTGAGTTCCATGCCTACACCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CAA 90 bp AGCTCTGGGTCAGGAGTGCTCATCAGAGGACTCAGTTCTCTGAAGGGAAGGAAACATTGGTACTCCACCTaGTCAGCAAAATGTTGGATG +
Preference number: 5 (lower is better)
Translates to: SSGSGVLIRGLSSLKGRKHWYST*SAKCWM
Trigger: CATCCAACATTTTGCTGACAAGGTGGAGTACCAATG...TTTCCTTCCCTTCAGAGAACTGAGTCCTCTGATGAGCACTCCTGACCCAGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS GCA 90 bp AGGAAATGTGACTTGAAAAAGATATTTGGTATCCAGCATCAGCTGTaGCGAGTCGCCCCGGTTATTCAGAAGAGCCTGTACTTTGCGGAC +
Preference number: 5 (lower is better)
Translates to: RKCDLKKIFGIQHQL*RVAPVIQKSLYFAD
Trigger: GTCCGCAAAGTACAGGCTCTTCTGAATAACCGGGGCGACTCGGCACAGCTGATGCTGGATACCAAATATCTTTTTCAAGTCACATTTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CAA 90 bp GAAGGTGTAGGCATGGAACTCAACTGTGGCTTCATACATGTCTCTGCACTTCACCTCCTCAGCTTCTGGTaGCTTCTTTGGGAACTTGAT +
Preference number: 5 (lower is better)
Translates to: EGVGMELNCGFIHVSALHLLSFW*LLWELD
Trigger: ATCAAGTTCCCAAAGAAGCAACCAGAAGCTGAGGAG...GTGAAGTGCAGAGACATGTATGAAGCCACAGTTGAGTTCCATGCCTACACCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CAA 90 bp GAAGGTGTAGGCATGGAACTCAACTGTGGCTTCATACATGTCTCTGCACTTCACATGTCAGCTCTGTCATaGACACCTTCAATGACAGTG +
Preference number: 5 (lower is better)
Translates to: EGVGMELNCGFIHVSALHMSALS*TPSMTV
Trigger: CACTGTCATTGAAGGTGTCAATGACAGAGCTGACAT...GTGAAGTGCAGAGACATGTATGAAGCCACAGTTGAGTTCCATGCCTACACCTTC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CAA 90 bp ATGGGTCTCAGCTCTGGGTCAGGAGTGCTCATCAGAGGACTCAGTTCTCTGAAGATTGTTATACAGCTTTaGAAGCCAGTTTTCATCGGT +
Preference number: 5 (lower is better)
Translates to: MGLSSGSGVLIRGLSSLKIVIQL*KPVFIG
Trigger: ACCGATGAAAACTGGCTTCAAAAGCTGTATAACAAT...CTTCAGAGAACTGAGTCCTCTGATGAGCACTCCTGACCCAGAGCTGAGACCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CAA 90 bp GTTGCAAAGCATCATGGGAGACAGGTGGGGCGTGGTTTTTCCTCAAATTGCAACCTGTTTCTCATAGGCTaGTGTTTTCAGCTCAAAACC +
Preference number: 5 (lower is better)
Translates to: VAKHHGRQVGRGFSSNCNLFLIG*CFQLKT
Trigger: GGTTTTGAGCTGAAAACACAAGCCTATGAGAAACAG...GTTGCAATTTGAGGAAAAACCACGCCCCACCTGTCTCCCATGATGCTTTGCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS GCA 90 bp AAGTCTGGGATCATCATGTTTTCTGATGTCAGCCTGGTGACTTCATaGCGGATACTTTCGTTGATGTCTGTCTCTTCTCTGAACAGCTTC +
Preference number: 5 (lower is better)
Translates to: KSGIIMFSDVSLVTS*RILSLMSVSSLNSF
Trigger: GAAGCTGTTCAGAGAAGAGACAGACATCAACGAAAGTATCCGGCATGAAGTCACCAGGCTGACATCAGAAAACATGATGATCCCAGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CAA 90 bp TGGAATTCTTTCCTAGAAGGTGTAGGCATGGAACTCAACTGTGGCTTCATACATTGCCGGATACTTTCGTaGATGTCTGTCTCTTCTCTG +
Preference number: 5 (lower is better)
Translates to: WNSFLEGVGMELNCGFIHCRILS*MSVSSL
Trigger: CAGAGAAGAGACAGACATCAACGAAAGTATCCGGCA...ATGTATGAAGCCACAGTTGAGTTCCATGCCTACACCTTCTAGGAAAGAATTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS-3UTR CAA 90 bp TGGAATTCTTTCCTAGAAGGTGTAGGCATGGAACTCAACTGTGGCTTCATACATCTGTTCATGAGGGATTaGAGCATGTTGGCGTCGTTT +
Preference number: 5 (lower is better)
Translates to: WNSFLEGVGMELNCGFIHLFMRD*SMLASF
Trigger: AAACGACGCCAACATGCTCAAATCCCTCATGAACAG...ATGTATGAAGCCACAGTTGAGTTCCATGCCTACACCTTCTAGGAAAGAATTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS TCA 90 bp TGCACATGGTTGGCTTTCTCAGTCGTCTTGGTCAGAGTCTTGACTTaGTCTTGTAGCCTTCTAATCATTCTGTCCTTCATGTCTAACTCT +
Preference number: 5 (lower is better)
Translates to: CTWLAFSVVLVRVLT*SCSLLIILSFMSNS
Trigger: AGAGTTAGACATGAAGGACAGAATGATTAGAAGGCTACAAGATCAAGTCAAGACTCTGACCAAGACGACTGAGAAAGCCAACCATGTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS TCA 90 bp GAAGGATGGATTGACTCTTTTCTCGAAGTCGTCTATAGGTGTGTATaGATTAAGGATCTTTATGATCTGCACAGCAGACAGGGAAGTGCA +
Preference number: 5 (lower is better)
Translates to: EGWIDSFLEVVYRCV*IKDLYDLHSRQGSA
Trigger: TGCACTTCCCTGTCTGCTGTGCAGATCATAAAGATCCTTAATTCATACACACCTATAGACGACTTCGAGAAAAGAGTCAATCCATCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS GCA 90 bp TGTCTGTATTCTGTAAGATCAAAATTGTTCAAGCAGTTCTTATTCTaGTGTGGGCTGTTATACTTCATGAATTCCTCTTCTCCGCTGTAC +
Preference number: 5 (lower is better)
Translates to: CLYSVRSKLFKQFLF*CGLLYFMNSSSPLY
Trigger: GTACAGCGGAGAAGAGGAATTCATGAAGTATAACAGCCCACAGCAGAATAAGAACTGCTTGAACAATTTTGATCTTACAGAATACAGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS TCA 72 bp ACCCACCAGGATGTCAGGGTTCCGAAGCGGAGGCAGTaGCCCTGGGTCAACAGGGTATTCCAGCTCCATGCC +
Preference number: 6 (lower is better)
Translates to: THQDVRVPKRRQ*PWVNRVFQLHA
Trigger: GGCATGGAGCTGGAATACCCTGTTGACCCAGGGTCACTGCCTCCGCTTCGGAACCCTGACATCCTGGTGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036555.8
ENSMUST00000216788.2
CDS CCA 72 bp TTCGTGGATCGCACCCACCAGCCTCTCCTTCCCTTCTaGATGCATCTCACTCTGTGCTTCCACGGCCCTGCC +
Preference number: 6 (lower is better)
Translates to: FVDRTHQPLLPF*MHLTLCFHGPA
Trigger: GGCAGGGCCGTGGAAGCACAGAGTGAGATGCATCCAGAAGGGAAGGAGAGGCTGGTGGGTGCGATCCACGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS CCA 72 bp CTCCGGAGAAAGCCGAGCTTGAAGCTGCTGGGGATCTaGGTCATCTCCAGGGCGTGTGGTGAGGCGGTGAAA +
Preference number: 6 (lower is better)
Translates to: LRRKPSLKLLGI*VISRACGEAVK
Trigger: TTTCACCGCCTCACCACACGCCCTGGAGATGACCCAGATCCCCAGCAGCTTCAAGCTCGGCTTTCTCCGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS CCA 72 bp GTCCGCGTATCGCACGCACATGAACAGGATGTGAGCTaGCAGCCCTGGGATCATGTTCACCACCACACCTCG +
Preference number: 6 (lower is better)
Translates to: VRVSHAHEQDVS*QPWDHVHHHTS
Trigger: CGAGGTGTGGTGGTGAACATGATCCCAGGGCTGCCAGCTCACATCCTGTTCATGTGCGTGCGATACGCGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS GCA 72 bp GGATGCATCTCACTCTGTGCTTCCACGGCCCTGCCCTaGATTCTCTCCTCTTCTCGGATTCGGTTCAGGTGG +
Preference number: 6 (lower is better)
Translates to: GCISLCASTALP*ILSSSRIRFRW
Trigger: CCACCTGAACCGAATCCGAGAAGAGGAGAGAATGCAGGGCAGGGCCGTGGAAGCACAGAGTGAGATGCATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS GCA 72 bp CAGCCTCTCCTTCCCTTCTGGATGCATCTCACTCTGTaGTTCCACGGCCCTGCCCTGCATTCTCTCCTCTTC +
Preference number: 6 (lower is better)
Translates to: QPLLPFWMHLTL*FHGPALHSLLF
Trigger: GAAGAGGAGAGAATGCAGGGCAGGGCCGTGGAAGCACAGAGTGAGATGCATCCAGAAGGGAAGGAGAGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS GCA 72 bp AGCATCCCCAGGTACTCCCTGGATCCCGAGGGCAGGTaGACATGGTTGGCTTTCTCAGTCGTCTTGGTCAGA +
Preference number: 6 (lower is better)
Translates to: SIPRYSLDPEGR*TWLAFSVVLVR
Trigger: TCTGACCAAGACGACTGAGAAAGCCAACCATGTGCACCTGCCCTCGGGATCCAGGGAGTACCTGGGGATGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS CCA 72 bp CCCAGGTACTCCCTGGATCCCGAGGGCAGGTGCACATaGTTGGCTTTCTCAGTCGTCTTGGTCAGAGTCTTG +
Preference number: 6 (lower is better)
Translates to: PRYSLDPEGRCT*LAFSVVLVRVL
Trigger: CAAGACTCTGACCAAGACGACTGAGAAAGCCAACCATGTGCACCTGCCCTCGGGATCCAGGGAGTACCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS TCA 72 bp GGTATTCCAGCTCCATGCCATCCTCCAGCAGAAGTCTaGGGACTCGGTCACCCGCTCTGTAGTCCTTTGCGA +
Preference number: 6 (lower is better)
Translates to: GIPAPCHPPAEV*GLGHPLCSPLR
Trigger: TCGCAAAGGACTACAGAGCGGGTGACCGAGTCCTCAGACTTCTGCTGGAGGATGGCATGGAGCTGGAATACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036555.8
ENSMUST00000216788.2
CDS GCA 72 bp TCACAATCTCGGGGTCCAGGCCGTTCTGACACATGGTaGTGTAGAAGTAGCTCAGCTGCTGCAGGATGGACG +
Preference number: 6 (lower is better)
Translates to: SQSRGPGRSDTW*CRSSSAAAGWT
Trigger: CGTCCATCCTGCAGCAGCTGAGCTACTTCTACAGCACCATGTGTCAGAACGGCCTGGACCCCGAGATTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS GCA 72 bp CTTCTGGATGCATCTCACTCTGTGCTTCCACGGCCCTaGCCTGCATTCTCTCCTCTTCTCGGATTCGGTTCA +
Preference number: 6 (lower is better)
Translates to: LLDASHSVLPRP*PAFSPLLGFGS
Trigger: TGAACCGAATCCGAGAAGAGGAGAGAATGCAGGGCAGGGCCGTGGAAGCACAGAGTGAGATGCATCCAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS GCA 72 bp GGCCGGAAATGCCCTGCAGGCTCTCATACTCCAGCATaGCTGGCACTATTATCGGCTGGAGGTTGTTTTCCA +
Preference number: 6 (lower is better)
Translates to: GRKCPAGSHTPA*LALLSAGGCFP
Trigger: TGGAAAACAACCTCCAGCCGATAATAGTGCCAGGCATGCTGGAGTATGAGAGCCTGCAGGGCATTTCCGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS CCA 72 bp TGCTTCTTTGGGAACTTGATGGCTTCATGCGGTTCGTaGATCGCACCCACCAGCCTCTCCTTCCCTTCTGGA +
Preference number: 6 (lower is better)
Translates to: CFFGNLMASCGS*IAPTSLSFPSG
Trigger: TCCAGAAGGGAAGGAGAGGCTGGTGGGTGCGATCCACGAACCGCATGAAGCCATCAAGTTCCCAAAGAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS CAA 72 bp ACAGCAGACAGGGAAGTGCAACACTGGGCGATCTCCTaGGCATCACTGTCTGTGGTCTTCTTCACCTGCAGC +
Preference number: 6 (lower is better)
Translates to: TADREVQHWAIS*ASLSVVFFTCS
Trigger: GCTGCAGGTGAAGAAGACCACAGACAGTGATGCCAAGGAGATCGCCCAGTGTTGCACTTCCCTGTCTGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS TCA 72 bp CTTCCTCCTCAGCTTCTGGTTGCTTCTTTGGGAACTTaGTGGCTTCATGCGGTTCGTGGATCGCACCCACCA +
Preference number: 6 (lower is better)
Translates to: LPPQLLVASLGT*WLHAVRGSHPP
Trigger: TGGTGGGTGCGATCCACGAACCGCATGAAGCCATCAAGTTCCCAAAGAAGCAACCAGAAGCTGAGGAGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS CCA 72 bp CTTCTTTCTTGTATTCCAGCATCCCCAGGTACTCCCTaGATCCCGAGGGCAGGTGCACATGGTTGGCTTTCT +
Preference number: 6 (lower is better)
Translates to: LLSCIPASPGTP*IPRAGAHGWLS
Trigger: AGAAAGCCAACCATGTGCACCTGCCCTCGGGATCCAGGGAGTACCTGGGGATGCTGGAATACAAGAAAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS CAA 72 bp ACTTCCTCCTCAGCTTCTGGTTGCTTCTTTGGGAACTaGATGGCTTCATGCGGTTCGTGGATCGCACCCACC +
Preference number: 6 (lower is better)
Translates to: TSSSASGCFFGN*MASCGSWIAPT
Trigger: GGTGGGTGCGATCCACGAACCGCATGAAGCCATCAAGTTCCCAAAGAAGCAACCAGAAGCTGAGGAGGAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS TCA 72 bp GCTGCTGGGGATCTGGGTCATCTCCAGGGCGTGTGGTaGGGCGGTGAAAGGAAATGTGACTTGAAAAAGATA +
Preference number: 6 (lower is better)
Translates to: AAGDLGHLQGVW*GGERKCDLKKI
Trigger: TATCTTTTTCAAGTCACATTTCCTTTCACCGCCTCACCACACGCCCTGGAGATGACCCAGATCCCCAGCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS GCA 72 bp GCCTGCTCCTTCAGGCGGGATTCAAGATCCTGCTTCTaGCTCTCCAGCTCTGAAATCTGCTGCTTAAAGTCT +
Preference number: 6 (lower is better)
Translates to: ACSFRRDSRSCF*LSSSEICCLKS
Trigger: AGACTTTAAGCAGCAGATTTCAGAGCTGGAGAGGCAGAAGCAGGATCTTGAATCCCGCCTGAAGGAGCAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS GCA 72 bp TTCTCAGCCTGCTCCTTCAGGCGGGATTCAAGATCCTaGTTCTGCCTCTCCAGCTCTGAAATCTGCTGCTTA +
Preference number: 6 (lower is better)
Translates to: FSACSFRRDSRS*FCLSSSEICCL
Trigger: TAAGCAGCAGATTTCAGAGCTGGAGAGGCAGAAGCAGGATCTTGAATCCCGCCTGAAGGAGCAGGCTGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS GCA 72 bp AACGGCTCTTCCAGCTTTCCTTCTATCTTCTCAGCCTaGTCCTTCAGGCGGGATTCAAGATCCTGCTTCTGC +
Preference number: 6 (lower is better)
Translates to: NGSSSFPSIFSA*SFRRDSRSCFC
Trigger: GCAGAAGCAGGATCTTGAATCCCGCCTGAAGGAGCAGGCTGAGAAGATAGAAGGAAAGCTGGAAGAGCCGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS CCA 72 bp CCCTGCATTCTCTCCTCTTCTCGGATTCGGTTCAGGTaGCTGAACGGCTCTTCCAGCTTTCCTTCTATCTTC +
Preference number: 6 (lower is better)
Translates to: PCILSSSRIRFR*LNGSSSFPSIF
Trigger: GAAGATAGAAGGAAAGCTGGAAGAGCCGTTCAGCCACCTGAACCGAATCCGAGAAGAGGAGAGAATGCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS CCA 72 bp ACTCTCGACTTCCTCCTCAGCTTCTGGTTGCTTCTTTaGGAACTTGATGGCTTCATGCGGTTCGTGGATCGC +
Preference number: 6 (lower is better)
Translates to: TLDFLLSFWLLL*ELDGFMRFVDR
Trigger: GCGATCCACGAACCGCATGAAGCCATCAAGTTCCCAAAGAAGCAACCAGAAGCTGAGGAGGAAGTCGAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS CCA 72 bp GGAAATGCCCTGCAGGCTCTCATACTCCAGCATGCCTaGCACTATTATCGGCTGGAGGTTGTTTTCCATCAC +
Preference number: 6 (lower is better)
Translates to: GNALQALILQHA*HYYRLEVVFHH
Trigger: GTGATGGAAAACAACCTCCAGCCGATAATAGTGCCAGGCATGCTGGAGTATGAGAGCCTGCAGGGCATTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS CAA 72 bp GGATTGGATGCCAAGACTTTGTCCTCCACATGGGCATaGCTGCTCGATTTGCTGACGGTAGCGAAGTACCTC +
Preference number: 6 (lower is better)
Translates to: GLDAKTLSSTWA*LLDLLTVAKYL
Trigger: GAGGTACTTCGCTACCGTCAGCAAATCGAGCAGCAATGCCCATGTGGAGGACAAAGTCTTGGCATCCAATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036555.8
ENSMUST00000216788.2
CDS CAA 72 bp CCGTTAATAGCACTGTTCATGAGGGATTTGAGCATGTaGGCGTCGTTTAGGGAGTCCGCGTATCGCACGCAC +
Preference number: 6 (lower is better)
Translates to: PLIALFMRDLSM*ASFRESAYRTH
Trigger: GTGCGTGCGATACGCGGACTCCCTAAACGACGCCAACATGCTCAAATCCCTCATGAACAGTGCTATTAACGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS CAA 90 bp TTGGCATTTCCAACAGCCTCAGTTATGGGATTGGATGCCAAGACTTaGTCCTCCACATGGGCATTGCTGCTCGATTTGCTGACGGTAGCG +
Preference number: 6 (lower is better)
Translates to: LAFPTASVMGLDAKT*SSTWALLLDLLTVA
Trigger: CGCTACCGTCAGCAAATCGAGCAGCAATGCCCATGTGGAGGACAAAGTCTTGGCATCCAATCCCATAACTGAGGCTGTTGGAAATGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036555.8
ENSMUST00000216788.2
CDS CAA 90 bp TGCTTGATGCCGTTAATAGCACTGTTCATGAGGGATTTGAGCATGTaGGCGTCGTTTAGGGAGTCCGCGTATCGCACGCACATGAACAGG +
Preference number: 6 (lower is better)
Translates to: CLMPLIALFMRDLSM*ASFRESAYRTHMNR
Trigger: CCTGTTCATGTGCGTGCGATACGCGGACTCCCTAAACGACGCCAACATGCTCAAATCCCTCATGAACAGTGCTATTAACGGCATCAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS TCA 72 bp GCATTCTCTCCTCTTCTCGGATTCGGTTCAGGTGGCTaGACGGCTCTTCCAGCTTTCCTTCTATCTTCTCAG +
Preference number: 6 (lower is better)
Translates to: AFSPLLGFGSGG*TALPAFLLSSQ
Trigger: CTGAGAAGATAGAAGGAAAGCTGGAAGAGCCGTTCAGCCACCTGAACCGAATCCGAGAAGAGGAGAGAATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS CCA 72 bp GTTATGGGATTGGATGCCAAGACTTTGTCCTCCACATaGGCATTGCTGCTCGATTTGCTGACGGTAGCGAAG +
Preference number: 6 (lower is better)
Translates to: VMGLDAKTLSST*ALLLDLLTVAK
Trigger: CTTCGCTACCGTCAGCAAATCGAGCAGCAATGCCCATGTGGAGGACAAAGTCTTGGCATCCAATCCCATAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036555.8
ENSMUST00000216788.2
CDS CCA 72 bp TTTATGATCTGCACAGCAGACAGGGAAGTGCAACACTaGGCGATCTCCTTGGCATCACTGTCTGTGGTCTTC +
Preference number: 6 (lower is better)
Translates to: FMICTADREVQH*AISLASLSVVF
Trigger: GAAGACCACAGACAGTGATGCCAAGGAGATCGCCCAGTGTTGCACTTCCCTGTCTGCTGTGCAGATCATAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS CAA 72 bp CCAACAGCCTCAGTTATGGGATTGGATGCCAAGACTTaGTCCTCCACATGGGCATTGCTGCTCGATTTGCTG +
Preference number: 6 (lower is better)
Translates to: PTASVMGLDAKT*SSTWALLLDLL
Trigger: CAGCAAATCGAGCAGCAATGCCCATGTGGAGGACAAAGTCTTGGCATCCAATCCCATAACTGAGGCTGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036555.8
ENSMUST00000216788.2
CDS CAA 90 bp TTAACCACATGCTTGATGCCGTTAATAGCACTGTTCATGAGGGATTaGAGCATGTTGGCGTCGTTTAGGGAGTCCGCGTATCGCACGCAC +
Preference number: 6 (lower is better)
Translates to: LTTCLMPLIALFMRD*SMLASFRESAYRTH
Trigger: GTGCGTGCGATACGCGGACTCCCTAAACGACGCCAACATGCTCAAATCCCTCATGAACAGTGCTATTAACGGCATCAAGCATGTGGTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS GCA 72 bp CTTGGCATTTCCAACAGCCTCAGTTATGGGATTGGATaGCAAGACTTTGTCCTCCACATGGGCATTGCTGCT +
Preference number: 6 (lower is better)
Translates to: LGISNSLSYGIG*QDFVLHMGIAA
Trigger: AGCAGCAATGCCCATGTGGAGGACAAAGTCTTGGCATCCAATCCCATAACTGAGGCTGTTGGAAATGCCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036555.8
ENSMUST00000216788.2
CDS CCA 72 bp TGGTCTTGGCATTTCCAACAGCCTCAGTTATGGGATTaGATGCCAAGACTTTGTCCTCCACATGGGCATTGC +
Preference number: 6 (lower is better)
Translates to: WSWHFQQPQLWD*MPRLCPPHGHC
Trigger: GCAATGCCCATGTGGAGGACAAAGTCTTGGCATCCAATCCCATAACTGAGGCTGTTGGAAATGCCAAGACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036555.8
ENSMUST00000216788.2
CDS CAA 72 bp GTGGTCTTGGCATTTCCAACAGCCTCAGTTATGGGATaGGATGCCAAGACTTTGTCCTCCACATGGGCATTG +
Preference number: 6 (lower is better)
Translates to: VVLAFPTASVMG*DAKTLSSTWAL
Trigger: CAATGCCCATGTGGAGGACAAAGTCTTGGCATCCAATCCCATAACTGAGGCTGTTGGAAATGCCAAGACCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036555.8
ENSMUST00000216788.2
CDS TCA 72 bp ACAGATAGTTGTGAGCCACCACGAGGTGCTGGGAATTaGACTCATGACCTGAAAGACAACTCTGGACTTCTC +
Preference number: 6 (lower is better)
Translates to: TDSCEPPRGAGN*THDLKDNSGLL
Trigger: GAGAAGTCCAGAGTTGTCTTTCAGGTCATGAGTTCAATTCCCAGCACCTCGTGGTGGCTCACAACTATCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216788.2
CDS GCA 72 bp GACTTGAAAAAGATATTTGGTATCCAGCATCAGCTGTaGCGAGTCGCCCCGGTTATTCAGAAGAGCCTGTAC +
Preference number: 6 (lower is better)
Translates to: DLKKIFGIQHQL*RVAPVIQKSLY
Trigger: GTACAGGCTCTTCTGAATAACCGGGGCGACTCGGCACAGCTGATGCTGGATACCAAATATCTTTTTCAAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS CCA 72 bp TTGTTGGAGAATACTCTCGACTTCCTCCTCAGCTTCTaGTTGCTTCTTTGGGAACTTGATGGCTTCATGCGG +
Preference number: 6 (lower is better)
Translates to: LLENTLDFLLSF*LLLWELDGFMR
Trigger: CCGCATGAAGCCATCAAGTTCCCAAAGAAGCAACCAGAAGCTGAGGAGGAAGTCGAGAGTATTCTCCAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS CAA 72 bp TTGGAGAATACTCTCGACTTCCTCCTCAGCTTCTGGTaGCTTCTTTGGGAACTTGATGGCTTCATGCGGTTC +
Preference number: 6 (lower is better)
Translates to: LENTLDFLLSFW*LLWELDGFMRF
Trigger: GAACCGCATGAAGCCATCAAGTTCCCAAAGAAGCAACCAGAAGCTGAGGAGGAAGTCGAGAGTATTCTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS CAA 72 bp TGCTTGATGCCGTTAATAGCACTGTTCATGAGGGATTaGAGCATGTTGGCGTCGTTTAGGGAGTCCGCGTAT +
Preference number: 6 (lower is better)
Translates to: CLMPLIALFMRD*SMLASFRESAY
Trigger: ATACGCGGACTCCCTAAACGACGCCAACATGCTCAAATCCCTCATGAACAGTGCTATTAACGGCATCAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS GCA 72 bp GAGAGGGGCTCCAGTGTCTCCTTGGCTAAGCTACTCTaGACATTCTTATCTTTTAGCCATTCTTCCAAGAAG +
Preference number: 6 (lower is better)
Translates to: ERGSSVSLAKLL*TFLSFSHSSKK
Trigger: CTTCTTGGAAGAATGGCTAAAAGATAAGAATGTGCAGAGTAGCTTAGCCAAGGAGACACTGGAGCCCCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS CAA 90 bp CCCCGGTTATTCAGAAGAGCCTGTACTTTGCGGACGAAGGATGGATaGACTCTTTTCTCGAAGTCGTCTATAGGTGTGTATGAATTAAGG +
Preference number: 6 (lower is better)
Translates to: PRLFRRACTLRTKDG*TLFSKSSIGVYELR
Trigger: CCTTAATTCATACACACCTATAGACGACTTCGAGAAAAGAGTCAATCCATCCTTCGTCCGCAAAGTACAGGCTCTTCTGAATAACCGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS TCA 72 bp AATCTGCTGCTTAAAGTCTGGGATCATCATGTTTTCTaGTGTCAGCCTGGTGACTTCATGCCGGATACTTTC +
Preference number: 6 (lower is better)
Translates to: NLLLKVWDHHVF*CQPGDFMPDTF
Trigger: GAAAGTATCCGGCATGAAGTCACCAGGCTGACATCAGAAAACATGATGATCCCAGACTTTAAGCAGCAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS GCA 72 bp TCTATAGGTGTGTATGAATTAAGGATCTTTATGATCTaGACAGCAGACAGGGAAGTGCAACACTGGGCGATC +
Preference number: 6 (lower is better)
Translates to: SIGVYELRIFMI*TADREVQHWAI
Trigger: GATCGCCCAGTGTTGCACTTCCCTGTCTGCTGTGCAGATCATAAAGATCCTTAATTCATACACACCTATAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS CCA 72 bp GTTATTCAGAAGAGCCTGTACTTTGCGGACGAAGGATaGATTGACTCTTTTCTCGAAGTCGTCTATAGGTGT +
Preference number: 6 (lower is better)
Translates to: VIQKSLYFADEG*IDSFLEVVYRC
Trigger: ACACCTATAGACGACTTCGAGAAAAGAGTCAATCCATCCTTCGTCCGCAAAGTACAGGCTCTTCTGAATAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS CAA 72 bp TTCAGAAGAGCCTGTACTTTGCGGACGAAGGATGGATaGACTCTTTTCTCGAAGTCGTCTATAGGTGTGTAT +
Preference number: 6 (lower is better)
Translates to: FRRACTLRTKDG*TLFSKSSIGVY
Trigger: ATACACACCTATAGACGACTTCGAGAAAAGAGTCAATCCATCCTTCGTCCGCAAAGTACAGGCTCTTCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS TCA 72 bp TTGGCTTTCTCAGTCGTCTTGGTCAGAGTCTTGACTTaGTCTTGTAGCCTTCTAATCATTCTGTCCTTCATG +
Preference number: 6 (lower is better)
Translates to: LAFSVVLVRVLT*SCSLLIILSFM
Trigger: CATGAAGGACAGAATGATTAGAAGGCTACAAGATCAAGTCAAGACTCTGACCAAGACGACTGAGAAAGCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS TCA 72 bp ATTGACTCTTTTCTCGAAGTCGTCTATAGGTGTGTATaGATTAAGGATCTTTATGATCTGCACAGCAGACAG +
Preference number: 6 (lower is better)
Translates to: IDSFLEVVYRCV*IKDLYDLHSRQ
Trigger: CTGTCTGCTGTGCAGATCATAAAGATCCTTAATTCATACACACCTATAGACGACTTCGAGAAAAGAGTCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS CCA 72 bp AAGATCAAAATTGTTCAAGCAGTTCTTATTCTGCTGTaGGCTGTTATACTTCATGAATTCCTCTTCTCCGCT +
Preference number: 6 (lower is better)
Translates to: KIKIVQAVLILL*AVILHEFLFSA
Trigger: AGCGGAGAAGAGGAATTCATGAAGTATAACAGCCCACAGCAGAATAAGAACTGCTTGAACAATTTTGATCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8
CDS GCA 72 bp TCTGTAAGATCAAAATTGTTCAAGCAGTTCTTATTCTaGTGTGGGCTGTTATACTTCATGAATTCCTCTTCT +
Preference number: 6 (lower is better)
Translates to: SVRSKLFKQFLF*CGLLYFMNSSS
Trigger: AGAAGAGGAATTCATGAAGTATAACAGCCCACAGCAGAATAAGAACTGCTTGAACAATTTTGATCTTACAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036555.8