Pregenerated sensors for MYO1F (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024300Ensembl transcript IDs: ENSMUST00000087605.13, ENSMUST00000173372.8, ENSMUST00000174695.2
Found 283 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | GCCTATGTATTGGTACAGTGCCCGGCACCTCGGGCCATGTGTCCGTaGTTGGGGCTTAGGCCGGCCCACTCCTGGCACAGGTCTCTGCCC | + |
Preference number: 1 (lower is better) Translates to: AYVLVQCPAPRAMCP*LGLRPAHSWHRSLP Trigger: GGGCAGAGACCTGTGCCAGGAGTGGGCCGGCCTAAGCCCCAACCACGGACACATGGCCCGAGGTGCCGGGCACTGTACCAATACATAGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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3UTR CCA 90 bp | ATTCTGTACTGTGCTCTGAAGGTGGCCGTGCTCGAGGACGTCTGCTaGCTCCTAGGGTTGAGGATGGAGGGCCCCGTGGAGGCCTCTGGG | + |
Preference number: 1 (lower is better) Translates to: ILYCALKVAVLEDVC*LLGLRMEGPVEASG Trigger: CCCAGAGGCCTCCACGGGGCCCTCCATCCTCAACCCTAGGAGCCAGCAGACGTCCTCGAGCACGGCCACCTTCAGAGCACAGTACAGAAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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3UTR CCA 90 bp | CCTCGGGCCATGTGTCCGTGGTTGGGGCTTAGGCCGGCCCACTCCTaGCACAGGTCTCTGCCCTATACTTCGCTTCCTTTGCATGCCTGC | + |
Preference number: 1 (lower is better) Translates to: PRAMCPWLGLRPAHS*HRSLPYTSLPLHAC Trigger: GCAGGCATGCAAAGGAAGCGAAGTATAGGGCAGAGACCTGTGCCAGGAGTGGGCCGGCCTAAGCCCCAACCACGGACACATGGCCCGAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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3UTR TCA 90 bp | AGGATGGAGGGCCCCGTGGAGGCCTCTGGGAACTCCTACCAGATGTaGTCTCCAGGGGTAGGGACCTTACCTGGGAAGAGGGTGGTACCC | + |
Preference number: 1 (lower is better) Translates to: RMEGPVEASGNSYQM*SPGVGTLPGKRVVP Trigger: GGGTACCACCCTCTTCCCAGGTAAGGTCCCTACCCCTGGAGATCACATCTGGTAGGAGTTCCCAGAGGCCTCCACGGGGCCCTCCATCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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3UTR GCA 90 bp | GGAATTCTGTACTGTGCTCTGAAGGTGGCCGTGCTCGAGGACGTCTaGTGGCTCCTAGGGTTGAGGATGGAGGGCCCCGTGGAGGCCTCT | + |
Preference number: 1 (lower is better) Translates to: GILYCALKVAVLEDV*WLLGLRMEGPVEAS Trigger: AGAGGCCTCCACGGGGCCCTCCATCCTCAACCCTAGGAGCCAGCAGACGTCCTCGAGCACGGCCACCTTCAGAGCACAGTACAGAATTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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3UTR CCA 90 bp | CTGCTGGCTCCTAGGGTTGAGGATGGAGGGCCCCGTGGAGGCCTCTaGGAACTCCTACCAGATGTGATCTCCAGGGGTAGGGACCTTACC | + |
Preference number: 1 (lower is better) Translates to: LLAPRVEDGGPRGGL*ELLPDVISRGRDLT Trigger: GGTAAGGTCCCTACCCCTGGAGATCACATCTGGTAGGAGTTCCCAGAGGCCTCCACGGGGCCCTCCATCCTCAACCCTAGGAGCCAGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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3UTR CCA 90 bp | ATGTATTGGTACAGTGCCCGGCACCTCGGGCCATGTGTCCGTGGTTaGGGCTTAGGCCGGCCCACTCCTGGCACAGGTCTCTGCCCTATA | + |
Preference number: 1 (lower is better) Translates to: MYWYSARHLGPCVRG*GLGRPTPGTGLCPI Trigger: TATAGGGCAGAGACCTGTGCCAGGAGTGGGCCGGCCTAAGCCCCAACCACGGACACATGGCCCGAGGTGCCGGGCACTGTACCAATACAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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3UTR CCA 90 bp | ACCTTACCTGGGAAGAGGGTGGTACCCCATTTCGATTCAAACCTCTaGGAGGCCCAGGGGCTGCTCGAGTGGGAGCCTGCGCTGACCTTC | + |
Preference number: 1 (lower is better) Translates to: TLPGKRVVPHFDSNL*EAQGLLEWEPALTF Trigger: GAAGGTCAGCGCAGGCTCCCACTCGAGCAGCCCCTGGGCCTCCCAGAGGTTTGAATCGAAATGGGGTACCACCCTCTTCCCAGGTAAGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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3UTR GCA 90 bp | GTTAAAGCTCAGCTCATCCACATCCTGGCCTATGTATTGGTACAGTaGCCGGCACCTCGGGCCATGTGTCCGTGGTTGGGGCTTAGGCCG | + |
Preference number: 1 (lower is better) Translates to: VKAQLIHILAYVLVQ*PAPRAMCPWLGLRP Trigger: CGGCCTAAGCCCCAACCACGGACACATGGCCCGAGGTGCCGGGCACTGTACCAATACATAGGCCAGGATGTGGATGAGCTGAGCTTTAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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3UTR GCA 90 bp | ATGCCTGCCACACCCTGGTCAGGCACATTAAGGAATTCTGTACTGTaGTCTGAAGGTGGCCGTGCTCGAGGACGTCTGCTGGCTCCTAGG | + |
Preference number: 1 (lower is better) Translates to: MPATPWSGTLRNSVL*SEGGRARGRLLAPR Trigger: CCTAGGAGCCAGCAGACGTCCTCGAGCACGGCCACCTTCAGAGCACAGTACAGAATTCCTTAATGTGCCTGACCAGGGTGTGGCAGGCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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3UTR TCA 90 bp | GGTGCTACAGTGCTCATCCTCCATACACAGGGGTCCCACTGGGCTTaGGGCCACAGCCTGAGTATTCTGGCCAGTGCAGATAAGATAACC | + |
Preference number: 1 (lower is better) Translates to: GATVLILHTQGSHWA*GHSLSILASADKIT Trigger: GGTTATCTTATCTGCACTGGCCAGAATACTCAGGCTGTGGCCTCAAGCCCAGTGGGACCCCTGTGTATGGAGGATGAGCACTGTAGCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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3UTR GCA 90 bp | CGGCCCACTCCTGGCACAGGTCTCTGCCCTATACTTCGCTTCCTTTaGATGCCTGCCACACCCTGGTCAGGCACATTAAGGAATTCTGTA | + |
Preference number: 1 (lower is better) Translates to: RPTPGTGLCPILRFL*MPATPWSGTLRNSV Trigger: TACAGAATTCCTTAATGTGCCTGACCAGGGTGTGGCAGGCATGCAAAGGAAGCGAAGTATAGGGCAGAGACCTGTGCCAGGAGTGGGCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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3UTR CCA 90 bp | AAGAAGTCATCCTGTCGGGTGCTGAGAGACACCCCTCGGAGGGCCTaGATATCCAGTTTCTTCTTCAGGACTTCACGCACTAGACCCTTC | + |
Preference number: 1 (lower is better) Translates to: KKSSCRVLRDTPRRA*ISSFFFRTSRTRPF Trigger: GAAGGGTCTAGTGCGTGAAGTCCTGAAGAAGAAACTGGATATCCAGGCCCTCCGAGGGGTGTCTCTCAGCACCCGACAGGATGACTTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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3UTR CCA 90 bp | TGGCAGGGTTTGGATCCCAGGCAGGCAAGCAGGCAGGCTGGTGGATaGACGATCAGATCTTCTCCACATAGTTTCCTGGAAAGAGACCTT | + |
Preference number: 1 (lower is better) Translates to: WQGLDPRQASRQAGG*TIRSSPHSFLERDL Trigger: AAGGTCTCTTTCCAGGAAACTATGTGGAGAAGATCTGATCGTCCATCCACCAGCCTGCCTGCTTGCCTGCCTGGGATCCAAACCCTGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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3UTR TCA 90 bp | CCTAACTCTGGGCAGTGCACAGCACTTTGCTCCCAGGGCAGGACATaGTTTGTTACATACACACAAGGCAGCTGGGAGGTAGGTTTTGCA | + |
Preference number: 1 (lower is better) Translates to: PNSGQCTALCSQGRT*FVTYTQGSWEVGFA Trigger: TGCAAAACCTACCTCCCAGCTGCCTTGTGTGTATGTAACAAATCATGTCCTGCCCTGGGAGCAAAGTGCTGTGCACTGCCCAGAGTTAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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3UTR CCA 90 bp | ATCTCAATGACTTCGTTCACGTTAAAGCTCAGCTCATCCACATCCTaGCCTATGTATTGGTACAGTGCCCGGCACCTCGGGCCATGTGTC | + |
Preference number: 1 (lower is better) Translates to: ISMTSFTLKLSSSTS*PMYWYSARHLGPCV Trigger: GACACATGGCCCGAGGTGCCGGGCACTGTACCAATACATAGGCCAGGATGTGGATGAGCTGAGCTTTAACGTGAACGAAGTCATTGAGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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3UTR TCA 90 bp | TCGGTCTTGAAGATACTTTCTAAGAAGCTGTCCGCAGCCTCTTCTTaGAGGATGAAGAAGTCATCCTGTCGGGTGCTGAGAGACACCCCT | + |
Preference number: 1 (lower is better) Translates to: SVLKILSKKLSAASS*RMKKSSCRVLRDTP Trigger: AGGGGTGTCTCTCAGCACCCGACAGGATGACTTCTTCATCCTTCAAGAAGAGGCTGCGGACAGCTTCTTAGAAAGTATCTTCAAGACCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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3UTR CAA 90 bp | GCTCTGAAGGTGGCCGTGCTCGAGGACGTCTGCTGGCTCCTAGGGTaGAGGATGGAGGGCCCCGTGGAGGCCTCTGGGAACTCCTACCAG | + |
Preference number: 2 (lower is better) Translates to: ALKVAVLEDVCWLLG*RMEGPVEASGNSYQ Trigger: CTGGTAGGAGTTCCCAGAGGCCTCCACGGGGCCCTCCATCCTCAACCCTAGGAGCCAGCAGACGTCCTCGAGCACGGCCACCTTCAGAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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3UTR CAA 90 bp | TATGTATTGGTACAGTGCCCGGCACCTCGGGCCATGTGTCCGTGGTaGGGGCTTAGGCCGGCCCACTCCTGGCACAGGTCTCTGCCCTAT | + |
Preference number: 2 (lower is better) Translates to: YVLVQCPAPRAMCPW*GLRPAHSWHRSLPY Trigger: ATAGGGCAGAGACCTGTGCCAGGAGTGGGCCGGCCTAAGCCCCAACCACGGACACATGGCCCGAGGTGCCGGGCACTGTACCAATACATA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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3UTR-3UTR CCA 90 bp | TTCCTGGCCATGAAGCCGACCCTTCCACCAGCCAGAAGAGTCTTCTATGAGGATCGGGCCATGTGTCCGTaGTTGGGGCTTAGGCCGGCC | + |
Preference number: 2 (lower is better) Translates to: FLAMKPTLPPARRVFYEDRAMCP*LGLRPA Trigger: GGCCGGCCTAAGCCCCAACCACGGACACATGGCCCG...ATCCTCATAGAAGACTCTTCTGGCTGGTGGAAGGGTCGGCTTCATGGCCAGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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3UTR-3UTR TCA 90 bp | AGTCAACCCACAGGAAGGCAGTACCAGGCATGGGGTGCTACAGTGCTCATCCTCAGACCTTCCTGGCCATaGAGCCGACCCTTCCACCAG | + |
Preference number: 2 (lower is better) Translates to: SQPTGRQYQAWGATVLILRPSWP*SRPFHQ Trigger: CTGGTGGAAGGGTCGGCTTCATGGCCAGGAAGGTCT...GAGGATGAGCACTGTAGCACCCCATGCCTGGTACTGCCTTCCTGTGGGTTGACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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3UTR-3UTR GCA 90 bp | AGTCAACCCACAGGAAGGCAGTACCAGGCATGGGGTGCTACAGTGCTCATCCTCGCTCGAGTGGGAGCCTaGGCTGACCTTCGAGGTCTA | + |
Preference number: 2 (lower is better) Translates to: SQPTGRQYQAWGATVLILARVGA*ADLRGL Trigger: TAGACCTCGAAGGTCAGCGCAGGCTCCCACTCGAGC...GAGGATGAGCACTGTAGCACCCCATGCCTGGTACTGCCTTCCTGTGGGTTGACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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3UTR-3UTR GCA 90 bp | CTTCCACTGGCAGGGTTTGGATCCCAGGCAGGCAAGCAGGCAGGCTGGTGGATGATACTTCGCTTCCTTTaGATGCCTGCCACACCCTGG | + |
Preference number: 2 (lower is better) Translates to: LPLAGFGSQAGKQAGWWMILRFL*MPATPW Trigger: CCAGGGTGTGGCAGGCATGCAAAGGAAGCGAAGTAT...CATCCACCAGCCTGCCTGCTTGCCTGCCTGGGATCCAAACCCTGCCAGTGGAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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3UTR-3UTR CCA 90 bp | CTTGTCCCGCGAGAGAAGGTGACATTTCGGGTACTACCTCCGCCCCAGCCTTCTTCCACTGGCAGGGTTTaGATCCCAGGCAGGCAAGCA | + |
Preference number: 2 (lower is better) Translates to: LVPREKVTFRVLPPPQPSSTGRV*IPGRQA Trigger: TGCTTGCCTGCCTGGGATCCAAACCCTGCCAGTGGA...AGAAGGCTGGGGCGGAGGTAGTACCCGAAATGTCACCTTCTCTCGCGGGACAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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3UTR-3UTR CCA 90 bp | TTCCTGGCCATGAAGCCGACCCTTCCACCAGCCAGAAGAGTCTTCTATGAGGATGGATGGAGGGCCCCGTaGAGGCCTCTGGGAACTCCT | + |
Preference number: 2 (lower is better) Translates to: FLAMKPTLPPARRVFYEDGWRAP*RPLGTP Trigger: AGGAGTTCCCAGAGGCCTCCACGGGGCCCTCCATCC...ATCCTCATAGAAGACTCTTCTGGCTGGTGGAAGGGTCGGCTTCATGGCCAGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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3UTR-3UTR CCA 90 bp | GGCTTCCACTGGCAGGGTTTGGATCCCAGGCAGGCAAGCAGGCAGGCTGGTGGACTCCACATAGTTTCCTaGAAAGAGACCTTCCTGGCC | + |
Preference number: 2 (lower is better) Translates to: GFHWQGLDPRQASRQAGGLHIVS*KETFLA Trigger: GGCCAGGAAGGTCTCTTTCCAGGAAACTATGTGGAG...TCCACCAGCCTGCCTGCTTGCCTGCCTGGGATCCAAACCCTGCCAGTGGAAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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3UTR-3UTR CCA 90 bp | TCAACCCACAGGAAGGCAGTACCAGGCATGGGGTGCTACAGTGCTCATCCTCCATCCACTGGCAGGGTTTaGATCCCAGGCAGGCAAGCA | + |
Preference number: 2 (lower is better) Translates to: STHRKAVPGMGCYSAHPPSTGRV*IPGRQA Trigger: TGCTTGCCTGCCTGGGATCCAAACCCTGCCAGTGGA...TGGAGGATGAGCACTGTAGCACCCCATGCCTGGTACTGCCTTCCTGTGGGTTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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3UTR-3UTR CCA 90 bp | ACATCCTGGCCTATGTATTGGTACAGTGCCCGGCACCTCGGGCCATGTGTCCGTCTTCGAGGTCTACCCTaGGCTAACCCCTTCCGTGTA | + |
Preference number: 2 (lower is better) Translates to: TSWPMYWYSARHLGPCVRLRGLP*ANPFRV Trigger: TACACGGAAGGGGTTAGCCCAGGGTAGACCTCGAAG...ACGGACACATGGCCCGAGGTGCCGGGCACTGTACCAATACATAGGCCAGGATGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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3UTR CAA 90 bp | GGCAATCCGTCCCCAATGCTGATAGTGAGAGCTCGACCCCCAGCCTaGAGCACAGCCAAGTCACTTGTCCCGCGAGAGAAGGTGACATTT | + |
Preference number: 2 (lower is better) Translates to: GNPSPMLIVRARPPA*STAKSLVPREKVTF Trigger: AAATGTCACCTTCTCTCGCGGGACAAGTGACTTGGCTGTGCTCAAGGCTGGGGGTCGAGCTCTCACTATCAGCATTGGGGACGGATTGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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3UTR CAA 90 bp | CCGGCCCACTCCTGGCACAGGTCTCTGCCCTATACTTCGCTTCCTTaGCATGCCTGCCACACCCTGGTCAGGCACATTAAGGAATTCTGT | + |
Preference number: 2 (lower is better) Translates to: PAHSWHRSLPYTSLP*HACHTLVRHIKEFC Trigger: ACAGAATTCCTTAATGTGCCTGACCAGGGTGTGGCAGGCATGCAAAGGAAGCGAAGTATAGGGCAGAGACCTGTGCCAGGAGTGGGCCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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3UTR CAA 90 bp | TTCGTTCACGTTAAAGCTCAGCTCATCCACATCCTGGCCTATGTATaGGTACAGTGCCCGGCACCTCGGGCCATGTGTCCGTGGTTGGGG | + |
Preference number: 2 (lower is better) Translates to: FVHVKAQLIHILAYV*VQCPAPRAMCPWLG Trigger: CCCCAACCACGGACACATGGCCCGAGGTGCCGGGCACTGTACCAATACATAGGCCAGGATGTGGATGAGCTGAGCTTTAACGTGAACGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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3UTR-3UTR TCA 90 bp | CCAGATGTGATCTCCAGGGGTAGGGACCTTACCTGGGAAGAGGGTGGTACCCCATCCGCAGCCTCTTCTTaGAGGATGAAGAAGTCATCC | + |
Preference number: 2 (lower is better) Translates to: PDVISRGRDLTWEEGGTPSAASS*RMKKSS Trigger: GGATGACTTCTTCATCCTTCAAGAAGAGGCTGCGGA...TGGGGTACCACCCTCTTCCCAGGTAAGGTCCCTACCCCTGGAGATCACATCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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3UTR-3UTR GCA 90 bp | TCTCCAGGGGTAGGGACCTTACCTGGGAAGAGGGTGGTACCCCATTTCGATTCACCTAACTCTGGGCAGTaGACAGCACTTTGCTCCCAG | + |
Preference number: 2 (lower is better) Translates to: SPGVGTLPGKRVVPHFDSPNSGQ*TALCSQ Trigger: CTGGGAGCAAAGTGCTGTGCACTGCCCAGAGTTAGG...TGAATCGAAATGGGGTACCACCCTCTTCCCAGGTAAGGTCCCTACCCCTGGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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3UTR-3UTR CCA 90 bp | GGCCCACTCCTGGCACAGGTCTCTGCCCTATACTTCGCTTCCTTTGCATGCCTGTACACACAAGGCAGCTaGGAGGTAGGTTTTGCAGCA | + |
Preference number: 2 (lower is better) Translates to: GPLLAQVSALYFASFACLYTQGS*EVGFAA Trigger: TGCTGCAAAACCTACCTCCCAGCTGCCTTGTGTGTA...CAGGCATGCAAAGGAAGCGAAGTATAGGGCAGAGACCTGTGCCAGGAGTGGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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3UTR-3UTR TCA 90 bp | TGGCCTATGTATTGGTACAGTGCCCGGCACCTCGGGCCATGTGTCCGTGGTTGGTCCCAGGGCAGGACATaGTTTGTTACATACACACAA | + |
Preference number: 2 (lower is better) Translates to: WPMYWYSARHLGPCVRGWSQGRT*FVTYTQ Trigger: TTGTGTGTATGTAACAAATCATGTCCTGCCCTGGGA...CCAACCACGGACACATGGCCCGAGGTGCCGGGCACTGTACCAATACATAGGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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3UTR-3UTR CCA 90 bp | TCTCCAGGGGTAGGGACCTTACCTGGGAAGAGGGTGGTACCCCATTTCGATTCAACCCCTCGGAGGGCCTaGATATCCAGTTTCTTCTTC | + |
Preference number: 2 (lower is better) Translates to: SPGVGTLPGKRVVPHFDSTPRRA*ISSFFF Trigger: GAAGAAGAAACTGGATATCCAGGCCCTCCGAGGGGT...TGAATCGAAATGGGGTACCACCCTCTTCCCAGGTAAGGTCCCTACCCCTGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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3UTR-3UTR CCA 90 bp | CTAACTCTGGGCAGTGCACAGCACTTTGCTCCCAGGGCAGGACATGATTTGTTAAACCAAGGCTTCCACTaGCAGGGTTTGGATCCCAGG | + |
Preference number: 2 (lower is better) Translates to: LTLGSAQHFAPRAGHDLLNQGFH*QGLDPR Trigger: CCTGGGATCCAAACCCTGCCAGTGGAAGCCTTGGTT...TAACAAATCATGTCCTGCCCTGGGAGCAAAGTGCTGTGCACTGCCCAGAGTTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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3UTR-3UTR CCA 90 bp | CACACAAGGCAGCTGGGAGGTAGGTTTTGCAGCAACTACTATTGGACACAGGAGAACCAAGGCTTCCACTaGCAGGGTTTGGATCCCAGG | + |
Preference number: 2 (lower is better) Translates to: HTRQLGGRFCSNYYWTQENQGFH*QGLDPR Trigger: CCTGGGATCCAAACCCTGCCAGTGGAAGCCTTGGTT...CTCCTGTGTCCAATAGTAGTTGCTGCAAAACCTACCTCCCAGCTGCCTTGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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3UTR-3UTR CCA 90 bp | GCCGGCCCACTCCTGGCACAGGTCTCTGCCCTATACTTCGCTTCCTTTGCATGCAGTGATGAGAGAAAGTaGAAAGGTCTAACTGTCCAC | + |
Preference number: 2 (lower is better) Translates to: AGPLLAQVSALYFASFACSDERK*KGLTVH Trigger: GTGGACAGTTAGACCTTTCCACTTTCTCTCATCACT...GCATGCAAAGGAAGCGAAGTATAGGGCAGAGACCTGTGCCAGGAGTGGGCCGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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3UTR-3UTR CCA 90 bp | CCCACAGGAAGGCAGTACCAGGCATGGGGTGCTACAGTGCTCATCCTCCATACATGCAGCAACTACTATTaGACACAGGAGAAAATGGAG | + |
Preference number: 2 (lower is better) Translates to: PTGRQYQAWGATVLILHTCSNYY*TQEKME Trigger: CTCCATTTTCTCCTGTGTCCAATAGTAGTTGCTGCA...TGTATGGAGGATGAGCACTGTAGCACCCCATGCCTGGTACTGCCTTCCTGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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3UTR-3UTR CCA 90 bp | CCCACAGGAAGGCAGTACCAGGCATGGGGTGCTACAGTGCTCATCCTCCATACAAGTGATGAGAGAAAGTaGAAAGGTCTAACTGTCCAC | + |
Preference number: 2 (lower is better) Translates to: PTGRQYQAWGATVLILHTSDERK*KGLTVH Trigger: GTGGACAGTTAGACCTTTCCACTTTCTCTCATCACT...TGTATGGAGGATGAGCACTGTAGCACCCCATGCCTGGTACTGCCTTCCTGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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3UTR-3UTR CCA 90 bp | TCAATGACTTCGTTCACGTTAAAGCTCAGCTCATCCACATCCTGGCCTATGTATTTCGATTCAAACCTCTaGGAGGCCCAGGGGCTGCTC | + |
Preference number: 2 (lower is better) Translates to: SMTSFTLKLSSSTSWPMYFDSNL*EAQGLL Trigger: GAGCAGCCCCTGGGCCTCCCAGAGGTTTGAATCGAA...ATACATAGGCCAGGATGTGGATGAGCTGAGCTTTAACGTGAACGAAGTCATTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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3UTR-3UTR TCA 90 bp | ACATACACACAAGGCAGCTGGGAGGTAGGTTTTGCAGCAACTACTATTGGACACCCTCTTCTTGAAGGATaGAGAAGTCATCCTGTCGGG | + |
Preference number: 2 (lower is better) Translates to: TYTQGSWEVGFAATTIGHPLLEG*RSHPVG Trigger: CCCGACAGGATGACTTCTTCATCCTTCAAGAAGAGG...GTGTCCAATAGTAGTTGCTGCAAAACCTACCTCCCAGCTGCCTTGTGTGTATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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3UTR CCA 72 bp | TACAGTGCCCGGCACCTCGGGCCATGTGTCCGTGGTTaGGGCTTAGGCCGGCCCACTCCTGGCACAGGTCTC | + |
Preference number: 3 (lower is better) Translates to: YSARHLGPCVRG*GLGRPTPGTGL Trigger: GAGACCTGTGCCAGGAGTGGGCCGGCCTAAGCCCCAACCACGGACACATGGCCCGAGGTGCCGGGCACTGTA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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3UTR CCA 72 bp | TTGGTACAGTGCCCGGCACCTCGGGCCATGTGTCCGTaGTTGGGGCTTAGGCCGGCCCACTCCTGGCACAGG | + |
Preference number: 3 (lower is better) Translates to: LVQCPAPRAMCP*LGLRPAHSWHR Trigger: CCTGTGCCAGGAGTGGGCCGGCCTAAGCCCCAACCACGGACACATGGCCCGAGGTGCCGGGCACTGTACCAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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3UTR CCA 72 bp | TGTGCTCTGAAGGTGGCCGTGCTCGAGGACGTCTGCTaGCTCCTAGGGTTGAGGATGGAGGGCCCCGTGGAG | + |
Preference number: 3 (lower is better) Translates to: CALKVAVLEDVC*LLGLRMEGPVE Trigger: CTCCACGGGGCCCTCCATCCTCAACCCTAGGAGCCAGCAGACGTCCTCGAGCACGGCCACCTTCAGAGCACA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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3UTR GCA 72 bp | TACTGTGCTCTGAAGGTGGCCGTGCTCGAGGACGTCTaGTGGCTCCTAGGGTTGAGGATGGAGGGCCCCGTG | + |
Preference number: 3 (lower is better) Translates to: YCALKVAVLEDV*WLLGLRMEGPV Trigger: CACGGGGCCCTCCATCCTCAACCCTAGGAGCCAGCAGACGTCCTCGAGCACGGCCACCTTCAGAGCACAGTA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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3UTR CCA 72 bp | GGGAAGAGGGTGGTACCCCATTTCGATTCAAACCTCTaGGAGGCCCAGGGGCTGCTCGAGTGGGAGCCTGCG | + |
Preference number: 3 (lower is better) Translates to: GKRVVPHFDSNL*EAQGLLEWEPA Trigger: CGCAGGCTCCCACTCGAGCAGCCCCTGGGCCTCCCAGAGGTTTGAATCGAAATGGGGTACCACCCTCTTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
||
3UTR TCA 72 bp | GGCCCCGTGGAGGCCTCTGGGAACTCCTACCAGATGTaGTCTCCAGGGGTAGGGACCTTACCTGGGAAGAGG | + |
Preference number: 3 (lower is better) Translates to: GPVEASGNSYQM*SPGVGTLPGKR Trigger: CCTCTTCCCAGGTAAGGTCCCTACCCCTGGAGATCACATCTGGTAGGAGTTCCCAGAGGCCTCCACGGGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
||
3UTR CCA 72 bp | CCTAGGGTTGAGGATGGAGGGCCCCGTGGAGGCCTCTaGGAACTCCTACCAGATGTGATCTCCAGGGGTAGG | + |
Preference number: 3 (lower is better) Translates to: PRVEDGGPRGGL*ELLPDVISRGR Trigger: CCTACCCCTGGAGATCACATCTGGTAGGAGTTCCCAGAGGCCTCCACGGGGCCCTCCATCCTCAACCCTAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
||
3UTR-3UTR CAA 90 bp | TTCCTGGCCATGAAGCCGACCCTTCCACCAGCCAGAAGAGTCTTCTATGAGGATGCCATGTGTCCGTGGTaGGGGCTTAGGCCGGCCCAC | + |
Preference number: 3 (lower is better) Translates to: FLAMKPTLPPARRVFYEDAMCPW*GLRPAH Trigger: GTGGGCCGGCCTAAGCCCCAACCACGGACACATGGC...ATCCTCATAGAAGACTCTTCTGGCTGGTGGAAGGGTCGGCTTCATGGCCAGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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3UTR GCA 72 bp | CCACAGGAAGGCAGTACCAGGCATGGGGTGCTACAGTaGTCATCCTCCATACACAGGGGTCCCACTGGGCTT | + |
Preference number: 3 (lower is better) Translates to: PQEGSTRHGVLQ*SSSIHRGPTGL Trigger: AAGCCCAGTGGGACCCCTGTGTATGGAGGATGAGCACTGTAGCACCCCATGCCTGGTACTGCCTTCCTGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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3UTR CCA 72 bp | ATGTGTCCGTGGTTGGGGCTTAGGCCGGCCCACTCCTaGCACAGGTCTCTGCCCTATACTTCGCTTCCTTTG | + |
Preference number: 3 (lower is better) Translates to: MCPWLGLRPAHS*HRSLPYTSLPL Trigger: CAAAGGAAGCGAAGTATAGGGCAGAGACCTGTGCCAGGAGTGGGCCGGCCTAAGCCCCAACCACGGACACAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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3UTR-3UTR CAA 90 bp | AGCAAGTCAACCCACAGGAAGGCAGTACCAGGCATGGGGTGCTACAGTGCTCATGCAGTGCACAGCACTTaGCTCCCAGGGCAGGACATG | + |
Preference number: 3 (lower is better) Translates to: SKSTHRKAVPGMGCYSAHAVHST*LPGQDM Trigger: CATGTCCTGCCCTGGGAGCAAAGTGCTGTGCACTGC...ATGAGCACTGTAGCACCCCATGCCTGGTACTGCCTTCCTGTGGGTTGACTTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
||
3UTR-3UTR CAA 90 bp | AGCAAGTCAACCCACAGGAAGGCAGTACCAGGCATGGGGTGCTACAGTGCTCATGCTCGACCCCCAGCCTaGAGCACAGCCAAGTCACTT | + |
Preference number: 3 (lower is better) Translates to: SKSTHRKAVPGMGCYSAHARPPA*STAKSL Trigger: AAGTGACTTGGCTGTGCTCAAGGCTGGGGGTCGAGC...ATGAGCACTGTAGCACCCCATGCCTGGTACTGCCTTCCTGTGGGTTGACTTGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
||
3UTR TCA 72 bp | GTGCTCATCCTCCATACACAGGGGTCCCACTGGGCTTaGGGCCACAGCCTGAGTATTCTGGCCAGTGCAGAT | + |
Preference number: 3 (lower is better) Translates to: VLILHTQGSHWA*GHSLSILASAD Trigger: ATCTGCACTGGCCAGAATACTCAGGCTGTGGCCTCAAGCCCAGTGGGACCCCTGTGTATGGAGGATGAGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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3UTR-3UTR CAA 90 bp | GGCTTCCACTGGCAGGGTTTGGATCCCAGGCAGGCAAGCAGGCAGGCTGGTGGAAGGGCAGGACATGATTaGTTACATACACACAAGGCA | + |
Preference number: 3 (lower is better) Translates to: GFHWQGLDPRQASRQAGGRAGHD*LHTHKA Trigger: TGCCTTGTGTGTATGTAACAAATCATGTCCTGCCCT...TCCACCAGCCTGCCTGCTTGCCTGCCTGGGATCCAAACCCTGCCAGTGGAAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
||
3UTR-3UTR CAA 90 bp | GTTGAGGATGGAGGGCCCCGTGGAGGCCTCTGGGAACTCCTACCAGATGTGATCGCCTCTTCAAAACGCTaGCACAGAAGGCTGACAAAC | + |
Preference number: 3 (lower is better) Translates to: VEDGGPRGGLWELLPDVIASSKR*HRRLTN Trigger: GTTTGTCAGCCTTCTGTGCAAGCGTTTTGAAGAGGC...GATCACATCTGGTAGGAGTTCCCAGAGGCCTCCACGGGGCCCTCCATCCTCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
||
3UTR TCA 72 bp | CTGGTCAGGCACATTAAGGAATTCTGTACTGTGCTCTaGAGGTGGCCGTGCTCGAGGACGTCTGCTGGCTCC | + |
Preference number: 3 (lower is better) Translates to: LVRHIKEFCTVL*RWPCSRTSAGS Trigger: GGAGCCAGCAGACGTCCTCGAGCACGGCCACCTTCAGAGCACAGTACAGAATTCCTTAATGTGCCTGACCAG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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3UTR GCA 72 bp | CCTGGCACAGGTCTCTGCCCTATACTTCGCTTCCTTTaGATGCCTGCCACACCCTGGTCAGGCACATTAAGG | + |
Preference number: 3 (lower is better) Translates to: PGTGLCPILRFL*MPATPWSGTLR Trigger: CCTTAATGTGCCTGACCAGGGTGTGGCAGGCATGCAAAGGAAGCGAAGTATAGGGCAGAGACCTGTGCCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
||
3UTR CCA 72 bp | TCCTGTCGGGTGCTGAGAGACACCCCTCGGAGGGCCTaGATATCCAGTTTCTTCTTCAGGACTTCACGCACT | + |
Preference number: 3 (lower is better) Translates to: SCRVLRDTPRRA*ISSFFFRTSRT Trigger: AGTGCGTGAAGTCCTGAAGAAGAAACTGGATATCCAGGCCCTCCGAGGGGTGTCTCTCAGCACCCGACAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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3UTR GCA 72 bp | ACACCCTGGTCAGGCACATTAAGGAATTCTGTACTGTaGTCTGAAGGTGGCCGTGCTCGAGGACGTCTGCTG | + |
Preference number: 3 (lower is better) Translates to: TPWSGTLRNSVL*SEGGRARGRLL Trigger: CAGCAGACGTCCTCGAGCACGGCCACCTTCAGAGCACAGTACAGAATTCCTTAATGTGCCTGACCAGGGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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3UTR-3UTR CAA 90 bp | ACATACACACAAGGCAGCTGGGAGGTAGGTTTTGCAGCAACTACTATTGGACACGGGGTCCCACTGGGCTaGAGGCCACAGCCTGAGTAT | + |
Preference number: 3 (lower is better) Translates to: TYTQGSWEVGFAATTIGHGVPLG*RPQPEY Trigger: ATACTCAGGCTGTGGCCTCAAGCCCAGTGGGACCCC...GTGTCCAATAGTAGTTGCTGCAAAACCTACCTCCCAGCTGCCTTGTGTGTATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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3UTR TCA 72 bp | GGGCAGTGCACAGCACTTTGCTCCCAGGGCAGGACATaGTTTGTTACATACACACAAGGCAGCTGGGAGGTA | + |
Preference number: 3 (lower is better) Translates to: GQCTALCSQGRT*FVTYTQGSWEV Trigger: TACCTCCCAGCTGCCTTGTGTGTATGTAACAAATCATGTCCTGCCCTGGGAGCAAAGTGCTGTGCACTGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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3UTR CCA 72 bp | ACTTCGTTCACGTTAAAGCTCAGCTCATCCACATCCTaGCCTATGTATTGGTACAGTGCCCGGCACCTCGGG | + |
Preference number: 3 (lower is better) Translates to: TSFTLKLSSSTS*PMYWYSARHLG Trigger: CCCGAGGTGCCGGGCACTGTACCAATACATAGGCCAGGATGTGGATGAGCTGAGCTTTAACGTGAACGAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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3UTR CCA 72 bp | TTGGATCCCAGGCAGGCAAGCAGGCAGGCTGGTGGATaGACGATCAGATCTTCTCCACATAGTTTCCTGGAA | + |
Preference number: 3 (lower is better) Translates to: LDPRQASRQAGG*TIRSSPHSFLE Trigger: TTCCAGGAAACTATGTGGAGAAGATCTGATCGTCCATCCACCAGCCTGCCTGCTTGCCTGCCTGGGATCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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3UTR-3UTR CAA 90 bp | CACAGAAGGCTGACAAACTCGGTCTTGAAGATACTTTCTAAGAAGCTGTCCGCAGGGGTCCCACTGGGCTaGAGGCCACAGCCTGAGTAT | + |
Preference number: 3 (lower is better) Translates to: HRRLTNSVLKILSKKLSAGVPLG*RPQPEY Trigger: ATACTCAGGCTGTGGCCTCAAGCCCAGTGGGACCCC...TGCGGACAGCTTCTTAGAAAGTATCTTCAAGACCGAGTTTGTCAGCCTTCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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3UTR CCA 72 bp | CCTATACTTCGCTTCCTTTGCATGCCTGCCACACCCTaGTCAGGCACATTAAGGAATTCTGTACTGTGCTCT | + |
Preference number: 3 (lower is better) Translates to: PILRFLCMPATP*SGTLRNSVLCS Trigger: AGAGCACAGTACAGAATTCCTTAATGTGCCTGACCAGGGTGTGGCAGGCATGCAAAGGAAGCGAAGTATAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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3UTR-3UTR CAA 90 bp | TCCAGGGGTAGGGACCTTACCTGGGAAGAGGGTGGTACCCCATTTCGATTCAAATTGCAGCAACTACTATaGGACACAGGAGAAAATGGA | + |
Preference number: 3 (lower is better) Translates to: SRGRDLTWEEGGTPFRFKLQQLL*DTGENG Trigger: TCCATTTTCTCCTGTGTCCAATAGTAGTTGCTGCAA...TTTGAATCGAAATGGGGTACCACCCTCTTCCCAGGTAAGGTCCCTACCCCTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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3UTR TCA 72 bp | AAGATACTTTCTAAGAAGCTGTCCGCAGCCTCTTCTTaGAGGATGAAGAAGTCATCCTGTCGGGTGCTGAGA | + |
Preference number: 3 (lower is better) Translates to: KILSKKLSAASS*RMKKSSCRVLR Trigger: TCTCAGCACCCGACAGGATGACTTCTTCATCCTTCAAGAAGAGGCTGCGGACAGCTTCTTAGAAAGTATCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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3UTR GCA 72 bp | TGTTACATACACACAAGGCAGCTGGGAGGTAGGTTTTaGAGCAACTACTATTGGACACAGGAGAAAATGGAG | + |
Preference number: 3 (lower is better) Translates to: CYIHTRQLGGRF*SNYYWTQEKME Trigger: CTCCATTTTCTCCTGTGTCCAATAGTAGTTGCTGCAAAACCTACCTCCCAGCTGCCTTGTGTGTATGTAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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3UTR CAA 72 bp | GTGGCCGTGCTCGAGGACGTCTGCTGGCTCCTAGGGTaGAGGATGGAGGGCCCCGTGGAGGCCTCTGGGAAC | + |
Preference number: 4 (lower is better) Translates to: VAVLEDVCWLLG*RMEGPVEASGN Trigger: GTTCCCAGAGGCCTCCACGGGGCCCTCCATCCTCAACCCTAGGAGCCAGCAGACGTCCTCGAGCACGGCCAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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3UTR CAA 72 bp | GTACAGTGCCCGGCACCTCGGGCCATGTGTCCGTGGTaGGGGCTTAGGCCGGCCCACTCCTGGCACAGGTCT | + |
Preference number: 4 (lower is better) Translates to: VQCPAPRAMCPW*GLRPAHSWHRS Trigger: AGACCTGTGCCAGGAGTGGGCCGGCCTAAGCCCCAACCACGGACACATGGCCCGAGGTGCCGGGCACTGTAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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CDS-3UTR CCA 90 bp | GGCTTCCACTGGCAGGGTTTGGATCCCAGGCAGGCAAGCAGGCAGGCTGGTGGAAGGCCGGCCCACTCCTaGCACAGGTCTCTGCCCTAT | + |
Preference number: 4 (lower is better) Translates to: GFHWQGLDPRQASRQAGGRPAHS*HRSLPY Trigger: ATAGGGCAGAGACCTGTGCCAGGAGTGGGCCGGCCT...TCCACCAGCCTGCCTGCTTGCCTGCCTGGGATCCAAACCCTGCCAGTGGAAGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087605.13 |
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CDS-3UTR TCA 90 bp | GGCTTCCACTGGCAGGGTTTGGATCCCAGGCAGGCAAGCAGGCAGGCTGGTGGAGGTCTGGCTCCATGTTaGCAGCACGAAGCAGGTGCT | + |
Preference number: 4 (lower is better) Translates to: GFHWQGLDPRQASRQAGGGLAPC*QHEAGA Trigger: AGCACCTGCTTCGTGCTGTCAACATGGAGCCAGACC...TCCACCAGCCTGCCTGCTTGCCTGCCTGGGATCCAAACCCTGCCAGTGGAAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR GCA 90 bp | CACTGGCAGGGTTTGGATCCCAGGCAGGCAAGCAGGCAGGCTGGTGGATGGACGATGAGTCCTAGGTTCTaGTGCTGCTCCTGGGAGGCC | + |
Preference number: 4 (lower is better) Translates to: HWQGLDPRQASRQAGGWTMSPRF*CCSWEA Trigger: GGCCTCCCAGGAGCAGCAGCAGAACCTAGGACTCAT...CGTCCATCCACCAGCCTGCCTGCTTGCCTGCCTGGGATCCAAACCCTGCCAGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR CCA 90 bp | GGCTTCCACTGGCAGGGTTTGGATCCCAGGCAGGCAAGCAGGCAGGCTGGTGGATGGAGCCAGCAGTACTaGGGCGGCCCTTCTTGTCTA | + |
Preference number: 4 (lower is better) Translates to: GFHWQGLDPRQASRQAGGWSQQY*GGPSCL Trigger: TAGACAAGAAGGGCCGCCCCAGTACTGCTGGCTCCA...TCCACCAGCCTGCCTGCTTGCCTGCCTGGGATCCAAACCCTGCCAGTGGAAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR CCA 90 bp | CACTGGCAGGGTTTGGATCCCAGGCAGGCAAGCAGGCAGGCTGGTGGATGGACGGGTAGGGACCTTACCTaGGAAGAGGGTGGTACCCCA | + |
Preference number: 4 (lower is better) Translates to: HWQGLDPRQASRQAGGWTGRDLT*EEGGTP Trigger: TGGGGTACCACCCTCTTCCCAGGTAAGGTCCCTACC...CGTCCATCCACCAGCCTGCCTGCTTGCCTGCCTGGGATCCAAACCCTGCCAGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087605.13 |
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CDS-3UTR TCA 90 bp | TCAACCCACAGGAAGGCAGTACCAGGCATGGGGTGCTACAGTGCTCATCCTCCACCGCGCTCCAGCTGTTaGAGTGCTCGTGGGTGCCCA | + |
Preference number: 4 (lower is better) Translates to: STHRKAVPGMGCYSAHPPPRSSC*SARGCP Trigger: TGGGCACCCACGAGCACTTCAACAGCTGGAGCGCGG...TGGAGGATGAGCACTGTAGCACCCCATGCCTGGTACTGCCTTCCTGTGGGTTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR TCA 90 bp | CTTCCACTGGCAGGGTTTGGATCCCAGGCAGGCAAGCAGGCAGGCTGGTGGATGGGTCTGGCTCCATGTTaGCAGCACGAAGCAGGTGCT | + |
Preference number: 4 (lower is better) Translates to: LPLAGFGSQAGKQAGWWMGLAPC*QHEAGA Trigger: AGCACCTGCTTCGTGCTGTCAACATGGAGCCAGACC...CATCCACCAGCCTGCCTGCTTGCCTGCCTGGGATCCAAACCCTGCCAGTGGAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR GCA 90 bp | CACTGGCAGGGTTTGGATCCCAGGCAGGCAAGCAGGCAGGCTGGTGGATGGACGTGCAAGACAAGCTGCTaGACGCTTGTCGGAATCCCG | + |
Preference number: 4 (lower is better) Translates to: HWQGLDPRQASRQAGGWTCKTSC*TLVGIP Trigger: CGGGATTCCGACAAGCGTGCAGCAGCTTGTCTTGCA...CGTCCATCCACCAGCCTGCCTGCTTGCCTGCCTGGGATCCAAACCCTGCCAGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR GCA 90 bp | GGCTTCCACTGGCAGGGTTTGGATCCCAGGCAGGCAAGCAGGCAGGCTGGTGGACAGGTGCAAGATCCCTaGCACGAGCTGCAAGACAAG | + |
Preference number: 4 (lower is better) Translates to: GFHWQGLDPRQASRQAGGQVQDP*HELQDK Trigger: CTTGTCTTGCAGCTCGTGGCAGGGATCTTGCACCTG...TCCACCAGCCTGCCTGCTTGCCTGCCTGGGATCCAAACCCTGCCAGTGGAAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR GCA 90 bp | ATAGTGAGAGCTCGACCCCCAGCCTTGAGCACAGCCAAGTCACTTGTCCCGCGAGCCGCCCACTGTCTATaGCCAGCAGGTAGGCTGGGA | + |
Preference number: 4 (lower is better) Translates to: IVRARPPALSTAKSLVPRAAHCL*PAGRLG Trigger: TCCCAGCCTACCTGCTGGGCATAGACAGTGGGCGGC...TCGCGGGACAAGTGACTTGGCTGTGCTCAAGGCTGGGGGTCGAGCTCTCACTAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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CDS-3UTR GCA 90 bp | AACCAAGGCTTCCACTGGCAGGGTTTGGATCCCAGGCAGGCAAGCAGGCAGGCTGAGTCCCTTGGCCAGTaGGTCACGAGTGTAGGCTGC | + |
Preference number: 4 (lower is better) Translates to: NQGFHWQGLDPRQASRQAESLGQ*VTSVGC Trigger: GCAGCCTACACTCGTGACGCACTGGCCAAGGGACTC...AGCCTGCCTGCTTGCCTGCCTGGGATCCAAACCCTGCCAGTGGAAGCCTTGGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR GCA 90 bp | CTTCCACTGGCAGGGTTTGGATCCCAGGCAGGCAAGCAGGCAGGCTGGTGGATGCTTCCTTTGCATGCCTaGCACACCCTGGTCAGGCAC | + |
Preference number: 4 (lower is better) Translates to: LPLAGFGSQAGKQAGWWMLPLHA*HTLVRH Trigger: GTGCCTGACCAGGGTGTGGCAGGCATGCAAAGGAAG...CATCCACCAGCCTGCCTGCTTGCCTGCCTGGGATCCAAACCCTGCCAGTGGAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087605.13 |
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CDS-3UTR CCA 90 bp | CACTGGCAGGGTTTGGATCCCAGGCAGGCAAGCAGGCAGGCTGGTGGATGGACGCCCAGGTACTCCACCTaGTGCTTCACTCTGCTTTCC | + |
Preference number: 4 (lower is better) Translates to: HWQGLDPRQASRQAGGWTPRYST*CFTLLS Trigger: GGAAAGCAGAGTGAAGCACCAGGTGGAGTACCTGGG...CGTCCATCCACCAGCCTGCCTGCTTGCCTGCCTGGGATCCAAACCCTGCCAGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR CCA 90 bp | AACCAAGGCTTCCACTGGCAGGGTTTGGATCCCAGGCAGGCAAGCAGGCAGGCTAGGTGCTGGACACCCTaGCGTTCATCTCCACGCCAC | + |
Preference number: 4 (lower is better) Translates to: NQGFHWQGLDPRQASRQARCWTP*RSSPRH Trigger: GTGGCGTGGAGATGAACGCCAGGGTGTCCAGCACCT...AGCCTGCCTGCTTGCCTGCCTGGGATCCAAACCCTGCCAGTGGAAGCCTTGGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR CCA 90 bp | ACATCCTGGCCTATGTATTGGTACAGTGCCCGGCACCTCGGGCCATGTGTCCGTCGCCGCCAGGCTTTCTaGATAGTGCGAGCGAAGCCG | + |
Preference number: 4 (lower is better) Translates to: TSWPMYWYSARHLGPCVRRRQAF*IVRAKP Trigger: CGGCTTCGCTCGCACTATCCAGAAAGCCTGGCGGCG...ACGGACACATGGCCCGAGGTGCCGGGCACTGTACCAATACATAGGCCAGGATGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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CDS-3UTR GCA 90 bp | AACCAAGGCTTCCACTGGCAGGGTTTGGATCCCAGGCAGGCAAGCAGGCAGGCTACAGCACGAAGCAGGTaGTGGACACCCTGGCGTTCA | + |
Preference number: 4 (lower is better) Translates to: NQGFHWQGLDPRQASRQATARSR*WTPWRS Trigger: TGAACGCCAGGGTGTCCAGCACCTGCTTCGTGCTGT...AGCCTGCCTGCTTGCCTGCCTGGGATCCAAACCCTGCCAGTGGAAGCCTTGGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR GCA 90 bp | CTTCCACTGGCAGGGTTTGGATCCCAGGCAGGCAAGCAGGCAGGCTGGTGGATGTTCATACTTTCGGACTaGTACATGGCGCCGCCAGGC | + |
Preference number: 4 (lower is better) Translates to: LPLAGFGSQAGKQAGWWMFILSD*YMAPPG Trigger: GCCTGGCGGCGCCATGTAGCAGTCCGAAAGTATGAA...CATCCACCAGCCTGCCTGCTTGCCTGCCTGGGATCCAAACCCTGCCAGTGGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR CCA 90 bp | CTTCCACTGGCAGGGTTTGGATCCCAGGCAGGCAAGCAGGCAGGCTGGTGGATGCCCAGGTACTCCACCTaGTGCTTCACTCTGCTTTCC | + |
Preference number: 4 (lower is better) Translates to: LPLAGFGSQAGKQAGWWMPRYST*CFTLLS Trigger: GGAAAGCAGAGTGAAGCACCAGGTGGAGTACCTGGG...CATCCACCAGCCTGCCTGCTTGCCTGCCTGGGATCCAAACCCTGCCAGTGGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR CCA 90 bp | TGCGCTGACCTTCGAGGTCTACCCTGGGCTAACCCCTTCCGTGTAGGCTTGGTGGCACGAAGCAGGTGCTaGACACCCTGGCGTTCATCT | + |
Preference number: 4 (lower is better) Translates to: CADLRGLPWANPFRVGLVARSRC*TPWRSS Trigger: AGATGAACGCCAGGGTGTCCAGCACCTGCTTCGTGC...CACCAAGCCTACACGGAAGGGGTTAGCCCAGGGTAGACCTCGAAGGTCAGCGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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CDS-3UTR CCA 90 bp | GGCTTCCACTGGCAGGGTTTGGATCCCAGGCAGGCAAGCAGGCAGGCTGGTGGACATCTGGTACTGGTCTaGCTCCATGTTGACAGCACG | + |
Preference number: 4 (lower is better) Translates to: GFHWQGLDPRQASRQAGGHLVLV*LHVDST Trigger: CGTGCTGTCAACATGGAGCCAGACCAGTACCAGATG...TCCACCAGCCTGCCTGCTTGCCTGCCTGGGATCCAAACCCTGCCAGTGGAAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR TCA 90 bp | CACTGGCAGGGTTTGGATCCCAGGCAGGCAAGCAGGCAGGCTGGTGGATGGACGCTGCCTGTTCCACATTaGGGGTCACATCAATGGACT | + |
Preference number: 4 (lower is better) Translates to: HWQGLDPRQASRQAGGWTLPVPH*GSHQWT Trigger: AGTCCATTGATGTGACCCTCAATGTGGAACAGGCAG...CGTCCATCCACCAGCCTGCCTGCTTGCCTGCCTGGGATCCAAACCCTGCCAGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR TCA 90 bp | TCCAGGGGTAGGGACCTTACCTGGGAAGAGGGTGGTACCCCATTTCGATTCAAACCGCGCTCCAGCTGTTaGAGTGCTCGTGGGTGCCCA | + |
Preference number: 4 (lower is better) Translates to: SRGRDLTWEEGGTPFRFKPRSSC*SARGCP Trigger: TGGGCACCCACGAGCACTTCAACAGCTGGAGCGCGG...TTTGAATCGAAATGGGGTACCACCCTCTTCCCAGGTAAGGTCCCTACCCCTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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CDS-3UTR GCA 90 bp | TTCTTCACCCGGAACTGTAGTAGGTCACTGAAGGTGAGGGGAAGGGGCCTGCGCCTGATGTTCCCCAGGTaGAAGATCCCTGCCACGAGC | + |
Preference number: 4 (lower is better) Translates to: FFTRNCSRSLKVRGRGLRLMFPR*KIPATS Trigger: GCTCGTGGCAGGGATCTTGCACCTGGGGAACATCAG...GCGCAGGCCCCTTCCCCTCACCTTCAGTGACCTACTACAGTTCCGGGTGAAGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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CDS-3UTR GCA 90 bp | AGCAAGTCAACCCACAGGAAGGCAGTACCAGGCATGGGGTGCTACAGTGCTCATGCCGCCCACTGTCTATaGCCAGCAGGTAGGCTGGGA | + |
Preference number: 4 (lower is better) Translates to: SKSTHRKAVPGMGCYSAHAAHCL*PAGRLG Trigger: TCCCAGCCTACCTGCTGGGCATAGACAGTGGGCGGC...ATGAGCACTGTAGCACCCCATGCCTGGTACTGCCTTCCTGTGGGTTGACTTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR GCA 90 bp | CTTCCACTGGCAGGGTTTGGATCCCAGGCAGGCAAGCAGGCAGGCTGGTGGATGAGGTACTCCACCTGGTaGTTCACTCTGCTTTCCTCC | + |
Preference number: 4 (lower is better) Translates to: LPLAGFGSQAGKQAGWWMRYSTW*FTLLSS Trigger: GGAGGAAAGCAGAGTGAAGCACCAGGTGGAGTACCT...CATCCACCAGCCTGCCTGCTTGCCTGCCTGGGATCCAAACCCTGCCAGTGGAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR CCA 90 bp | CTTCCACTGGCAGGGTTTGGATCCCAGGCAGGCAAGCAGGCAGGCTGGTGGATGATGTCTTTGACGTGCTaGACCTTGTCTCCCCCACCA | + |
Preference number: 4 (lower is better) Translates to: LPLAGFGSQAGKQAGWWMMSLTC*TLSPPP Trigger: TGGTGGGGGAGACAAGGTCCAGCACGTCAAAGACAT...CATCCACCAGCCTGCCTGCTTGCCTGCCTGGGATCCAAACCCTGCCAGTGGAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR CCA 90 bp | AGTCAACCCACAGGAAGGCAGTACCAGGCATGGGGTGCTACAGTGCTCATCCTCTTCTGCTGCTGCTCCTaGGAGGCCCCTTCCAGAAGC | + |
Preference number: 4 (lower is better) Translates to: SQPTGRQYQAWGATVLILFCCCS*EAPSRS Trigger: GCTTCTGGAAGGGGCCTCCCAGGAGCAGCAGCAGAA...GAGGATGAGCACTGTAGCACCCCATGCCTGGTACTGCCTTCCTGTGGGTTGACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR TCA 90 bp | TCAACCCACAGGAAGGCAGTACCAGGCATGGGGTGCTACAGTGCTCATCCTCCAGGTACATGTTGTCGGTaGGGGCATAGATGTGCGGGG | + |
Preference number: 4 (lower is better) Translates to: STHRKAVPGMGCYSAHPPGTCCR*GHRCAG Trigger: CCCCGCACATCTATGCCCTCACCGACAACATGTACC...TGGAGGATGAGCACTGTAGCACCCCATGCCTGGTACTGCCTTCCTGTGGGTTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR TCA 90 bp | CACAGGTCTCTGCCCTATACTTCGCTTCCTTTGCATGCCTGCCACACCCTGGTCGGTACATGTTGTCGGTaGGGGCATAGATGTGCGGGG | + |
Preference number: 4 (lower is better) Translates to: HRSLPYTSLPLHACHTLVGTCCR*GHRCAG Trigger: CCCCGCACATCTATGCCCTCACCGACAACATGTACC...GACCAGGGTGTGGCAGGCATGCAAAGGAAGCGAAGTATAGGGCAGAGACCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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CDS-3UTR TCA 90 bp | CAAGTCAACCCACAGGAAGGCAGTACCAGGCATGGGGTGCTACAGTGCTCATCCTCTGCATGGCACGGTTaGTGGCCTCCACCAGGAAGT | + |
Preference number: 4 (lower is better) Translates to: QVNPQEGSTRHGVLQCSSSAWHG*WPPPGS Trigger: ACTTCCTGGTGGAGGCCATCAACCGTGCCATGCAGA...GGATGAGCACTGTAGCACCCCATGCCTGGTACTGCCTTCCTGTGGGTTGACTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR GCA 90 bp | ACATCCTGGCCTATGTATTGGTACAGTGCCCGGCACCTCGGGCCATGTGTCCGTCTGGTCAGCTTCTCTTaGAGCCGCCCACTGTCTATG | + |
Preference number: 4 (lower is better) Translates to: TSWPMYWYSARHLGPCVRLVSFS*SRPLSM Trigger: CATAGACAGTGGGCGGCTGCAAGAGAAGCTGACCAG...ACGGACACATGGCCCGAGGTGCCGGGCACTGTACCAATACATAGGCCAGGATGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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CDS-3UTR GCA 90 bp | CACAGGTCTCTGCCCTATACTTCGCTTCCTTTGCATGCCTGCCACACCCTGGTCTGGGGGTCCAGCGGATaGCCTCTTGCACATACTCCT | + |
Preference number: 4 (lower is better) Translates to: HRSLPYTSLPLHACHTLVWGSSG*PLAHTP Trigger: AGGAGTATGTGCAAGAGGGCATCCGCTGGACCCCCA...GACCAGGGTGTGGCAGGCATGCAAAGGAAGCGAAGTATAGGGCAGAGACCTGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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CDS-3UTR GCA 90 bp | AGCAAGTCAACCCACAGGAAGGCAGTACCAGGCATGGGGTGCTACAGTGCTCATCTCCAGCTGTTGAAGTaGTCGTGGGTGCCCACTGCC | + |
Preference number: 4 (lower is better) Translates to: SKSTHRKAVPGMGCYSAHLQLLK*SWVPTA Trigger: GGCAGTGGGCACCCACGAGCACTTCAACAGCTGGAG...ATGAGCACTGTAGCACCCCATGCCTGGTACTGCCTTCCTGTGGGTTGACTTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR GCA 90 bp | CACAGGTCTCTGCCCTATACTTCGCTTCCTTTGCATGCCTGCCACACCCTGGTCACAGCACGAAGCAGGTaGTGGACACCCTGGCGTTCA | + |
Preference number: 4 (lower is better) Translates to: HRSLPYTSLPLHACHTLVTARSR*WTPWRS Trigger: TGAACGCCAGGGTGTCCAGCACCTGCTTCGTGCTGT...GACCAGGGTGTGGCAGGCATGCAAAGGAAGCGAAGTATAGGGCAGAGACCTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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CDS-3UTR CCA 90 bp | GGCTTCCACTGGCAGGGTTTGGATCCCAGGCAGGCAAGCAGGCAGGCTGGTGGACCACCTCGACTGAACTaGATCTCAAAGTACTTGCCA | + |
Preference number: 4 (lower is better) Translates to: GFHWQGLDPRQASRQAGGPPRLN*ISKYLP Trigger: TGGCAAGTACTTTGAGATCCAGTTCAGTCGAGGTGG...TCCACCAGCCTGCCTGCTTGCCTGCCTGGGATCCAAACCCTGCCAGTGGAAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR CCA 90 bp | AACCAAGGCTTCCACTGGCAGGGTTTGGATCCCAGGCAGGCAAGCAGGCAGGCTGATCTTGCCTCCATCTaGCTCTCCACCTCGACTGAA | + |
Preference number: 4 (lower is better) Translates to: NQGFHWQGLDPRQASRQADLASI*LSTSTE Trigger: TTCAGTCGAGGTGGAGAGCCAGATGGAGGCAAGATC...AGCCTGCCTGCTTGCCTGCCTGGGATCCAAACCCTGCCAGTGGAAGCCTTGGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR CCA 90 bp | ACATCCTGGCCTATGTATTGGTACAGTGCCCGGCACCTCGGGCCATGTGTCCGTCACGCTCATGATGCCTaGGGGGCTCAGCTTGTTTTC | + |
Preference number: 4 (lower is better) Translates to: TSWPMYWYSARHLGPCVRHAHDA*GAQLVF Trigger: GAAAACAAGCTGAGCCCCCCAGGCATCATGAGCGTG...ACGGACACATGGCCCGAGGTGCCGGGCACTGTACCAATACATAGGCCAGGATGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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CDS-3UTR CCA 90 bp | TGGCCTATGTATTGGTACAGTGCCCGGCACCTCGGGCCATGTGTCCGTGGTTGGCATCTGGTACTGGTCTaGCTCCATGTTGACAGCACG | + |
Preference number: 4 (lower is better) Translates to: WPMYWYSARHLGPCVRGWHLVLV*LHVDST Trigger: CGTGCTGTCAACATGGAGCCAGACCAGTACCAGATG...CCAACCACGGACACATGGCCCGAGGTGCCGGGCACTGTACCAATACATAGGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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CDS-3UTR CCA 90 bp | GATAAGATAACCAAGGCTTCCACTGGCAGGGTTTGGATCCCAGGCAGGCAAGCACGCCGCCAGGCTTTCTaGATAGTGCGAGCGAAGCCG | + |
Preference number: 4 (lower is better) Translates to: DKITKASTGRVWIPGRQARRQAF*IVRAKP Trigger: CGGCTTCGCTCGCACTATCCAGAAAGCCTGGCGGCG...TGCTTGCCTGCCTGGGATCCAAACCCTGCCAGTGGAAGCCTTGGTTATCTTATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR CCA 90 bp | CTGGGCAGTGCACAGCACTTTGCTCCCAGGGCAGGACATGATTTGTTACATACAGGATGGAGGGCCCCGTaGAGGCCTCTGGGAACTCCT | + |
Preference number: 4 (lower is better) Translates to: LGSAQHFAPRAGHDLLHTGWRAP*RPLGTP Trigger: AGGAGTTCCCAGAGGCCTCCACGGGGCCCTCCATCC...TGTATGTAACAAATCATGTCCTGCCCTGGGAGCAAAGTGCTGTGCACTGCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087605.13 |
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3UTR CAA 72 bp | AGTGCTCATCCTCCATACACAGGGGTCCCACTGGGCTaGAGGCCACAGCCTGAGTATTCTGGCCAGTGCAGA | + |
Preference number: 4 (lower is better) Translates to: SAHPPYTGVPLG*RPQPEYSGQCR Trigger: TCTGCACTGGCCAGAATACTCAGGCTGTGGCCTCAAGCCCAGTGGGACCCCTGTGTATGGAGGATGAGCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR TCA 90 bp | GGCTTCCACTGGCAGGGTTTGGATCCCAGGCAGGCAAGCAGGCAGGCTGGTGGACACCTTGTAGGTGTCTaGTTGGTTGAGGTAGTAGTA | + |
Preference number: 4 (lower is better) Translates to: GFHWQGLDPRQASRQAGGHLVGV*LVEVVV Trigger: TACTACTACCTCAACCAATCAGACACCTACAAGGTG...TCCACCAGCCTGCCTGCTTGCCTGCCTGGGATCCAAACCCTGCCAGTGGAAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR TCA 90 bp | AACCAAGGCTTCCACTGGCAGGGTTTGGATCCCAGGCAGGCAAGCAGGCAGGCTCTTCTTCACAGAAGCTaGTGTTCCCCAGGTGCAAGA | + |
Preference number: 4 (lower is better) Translates to: NQGFHWQGLDPRQASRQALLHRS*CSPGAR Trigger: TCTTGCACCTGGGGAACATCAGCTTCTGTGAAGAAG...AGCCTGCCTGCTTGCCTGCCTGGGATCCAAACCCTGCCAGTGGAAGCCTTGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR GCA 90 bp | CAAGTCAACCCACAGGAAGGCAGTACCAGGCATGGGGTGCTACAGTGCTCATCCCAGGTGCAAGATCCCTaGCACGAGCTGCAAGACAAG | + |
Preference number: 4 (lower is better) Translates to: QVNPQEGSTRHGVLQCSSQVQDP*HELQDK Trigger: CTTGTCTTGCAGCTCGTGGCAGGGATCTTGCACCTG...GGATGAGCACTGTAGCACCCCATGCCTGGTACTGCCTTCCTGTGGGTTGACTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR GCA 90 bp | TCCAGGGGTAGGGACCTTACCTGGGAAGAGGGTGGTACCCCATTTCGATTCAAAGAGTCCCTTGGCCAGTaGGTCACGAGTGTAGGCTGC | + |
Preference number: 4 (lower is better) Translates to: SRGRDLTWEEGGTPFRFKESLGQ*VTSVGC Trigger: GCAGCCTACACTCGTGACGCACTGGCCAAGGGACTC...TTTGAATCGAAATGGGGTACCACCCTCTTCCCAGGTAAGGTCCCTACCCCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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CDS-3UTR GCA 90 bp | AAGGTGGCCGTGCTCGAGGACGTCTGCTGGCTCCTAGGGTTGAGGATGGAGGGCATAGGAGACCTTGCCTaGATAGTGATGGATGACGAA | + |
Preference number: 4 (lower is better) Translates to: KVAVLEDVCWLLGLRMEGIGDLA*IVMDDE Trigger: TTCGTCATCCATCACTATGCAGGCAAGGTCTCCTAT...GCCCTCCATCCTCAACCCTAGGAGCCAGCAGACGTCCTCGAGCACGGCCACCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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CDS-3UTR GCA 90 bp | TCATCCACATCCTGGCCTATGTATTGGTACAGTGCCCGGCACCTCGGGCCATGTTTCATACTTTCGGACTaGTACATGGCGCCGCCAGGC | + |
Preference number: 4 (lower is better) Translates to: SSTSWPMYWYSARHLGPCFILSD*YMAPPG Trigger: GCCTGGCGGCGCCATGTAGCAGTCCGAAAGTATGAA...ACATGGCCCGAGGTGCCGGGCACTGTACCAATACATAGGCCAGGATGTGGATGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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CDS-3UTR CCA 90 bp | GACTTAGATAGCAAGTCAACCCACAGGAAGGCAGTACCAGGCATGGGGTGCTACTTCTGCTGCTGCTCCTaGGAGGCCCCTTCCAGAAGC | + |
Preference number: 4 (lower is better) Translates to: DLDSKSTHRKAVPGMGCYFCCCS*EAPSRS Trigger: GCTTCTGGAAGGGGCCTCCCAGGAGCAGCAGCAGAA...GTAGCACCCCATGCCTGGTACTGCCTTCCTGTGGGTTGACTTGCTATCTAAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR CCA 90 bp | ATAGTGAGAGCTCGACCCCCAGCCTTGAGCACAGCCAAGTCACTTGTCCCGCGATGTCCATCTTACGGCTaGTCAGCTTCTCTTGCAGCC | + |
Preference number: 4 (lower is better) Translates to: IVRARPPALSTAKSLVPRCPSYG*SASLAA Trigger: GGCTGCAAGAGAAGCTGACCAGCCGTAAGATGGACA...TCGCGGGACAAGTGACTTGGCTGTGCTCAAGGCTGGGGGTCGAGCTCTCACTAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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CDS-3UTR CCA 90 bp | TCAACCCACAGGAAGGCAGTACCAGGCATGGGGTGCTACAGTGCTCATCCTCCACACGCTCATGATGCCTaGGGGGCTCAGCTTGTTTTC | + |
Preference number: 4 (lower is better) Translates to: STHRKAVPGMGCYSAHPPHAHDA*GAQLVF Trigger: GAAAACAAGCTGAGCCCCCCAGGCATCATGAGCGTG...TGGAGGATGAGCACTGTAGCACCCCATGCCTGGTACTGCCTTCCTGTGGGTTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR CCA 90 bp | GACTTAGATAGCAAGTCAACCCACAGGAAGGCAGTACCAGGCATGGGGTGCTACATCTCCACGCCACCGTaGCCATGTCTCAGGGGTCAG | + |
Preference number: 4 (lower is better) Translates to: DLDSKSTHRKAVPGMGCYISTPP*PCLRGQ Trigger: CTGACCCCTGAGACATGGCCACGGTGGCGTGGAGAT...GTAGCACCCCATGCCTGGTACTGCCTTCCTGTGGGTTGACTTGCTATCTAAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR CCA 90 bp | TCCAGGGGTAGGGACCTTACCTGGGAAGAGGGTGGTACCCCATTTCGATTCAAAAGGTGCTGGACACCCTaGCGTTCATCTCCACGCCAC | + |
Preference number: 4 (lower is better) Translates to: SRGRDLTWEEGGTPFRFKRCWTP*RSSPRH Trigger: GTGGCGTGGAGATGAACGCCAGGGTGTCCAGCACCT...TTTGAATCGAAATGGGGTACCACCCTCTTCCCAGGTAAGGTCCCTACCCCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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CDS-3UTR CCA 90 bp | CAAGTCAACCCACAGGAAGGCAGTACCAGGCATGGGGTGCTACAGTGCTCATCCCTTCGAGGTCTACCCTaGGCTAACCCCTTCCGTGTA | + |
Preference number: 4 (lower is better) Translates to: QVNPQEGSTRHGVLQCSSLRGLP*ANPFRV Trigger: TACACGGAAGGGGTTAGCCCAGGGTAGACCTCGAAG...GGATGAGCACTGTAGCACCCCATGCCTGGTACTGCCTTCCTGTGGGTTGACTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087605.13 |
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CDS-3UTR CCA 90 bp | CTGGGCAGTGCACAGCACTTTGCTCCCAGGGCAGGACATGATTTGTTACATACACCATGTGTCCGTGGTTaGGGCTTAGGCCGGCCCACT | + |
Preference number: 4 (lower is better) Translates to: LGSAQHFAPRAGHDLLHTPCVRG*GLGRPT Trigger: AGTGGGCCGGCCTAAGCCCCAACCACGGACACATGG...TGTATGTAACAAATCATGTCCTGCCCTGGGAGCAAAGTGCTGTGCACTGCCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087605.13 |
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3UTR CAA 72 bp | CGAGGTCTACCCTGGGCTAACCCCTTCCGTGTAGGCTaGGTGCTCTTAGGCAATCCGTCCCCAATGCTGATA | + |
Preference number: 4 (lower is better) Translates to: RGLPWANPFRVG*VLLGNPSPMLI Trigger: TATCAGCATTGGGGACGGATTGCCTAAGAGCACCAAGCCTACACGGAAGGGGTTAGCCCAGGGTAGACCTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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3UTR CAA 72 bp | GTTAAAGCTCAGCTCATCCACATCCTGGCCTATGTATaGGTACAGTGCCCGGCACCTCGGGCCATGTGTCCG | + |
Preference number: 4 (lower is better) Translates to: VKAQLIHILAYV*VQCPAPRAMCP Trigger: CGGACACATGGCCCGAGGTGCCGGGCACTGTACCAATACATAGGCCAGGATGTGGATGAGCTGAGCTTTAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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CDS-3UTR TCA 90 bp | GACTTAGATAGCAAGTCAACCCACAGGAAGGCAGTACCAGGCATGGGGTGCTACTTGTCGGAATCCCGATaGCTTGCATGGCGCTCAGGG | + |
Preference number: 4 (lower is better) Translates to: DLDSKSTHRKAVPGMGCYLSESR*LAWRSG Trigger: CCCTGAGCGCCATGCAAGTCATCGGGATTCCGACAA...GTAGCACCCCATGCCTGGTACTGCCTTCCTGTGGGTTGACTTGCTATCTAAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR TCA 90 bp | ACATCCTGGCCTATGTATTGGTACAGTGCCCGGCACCTCGGGCCATGTGTCCGTCTGCCTGTTCCACATTaGGGGTCACATCAATGGACT | + |
Preference number: 4 (lower is better) Translates to: TSWPMYWYSARHLGPCVRLPVPH*GSHQWT Trigger: AGTCCATTGATGTGACCCTCAATGTGGAACAGGCAG...ACGGACACATGGCCCGAGGTGCCGGGCACTGTACCAATACATAGGCCAGGATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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CDS-3UTR TCA 90 bp | GACTTAGATAGCAAGTCAACCCACAGGAAGGCAGTACCAGGCATGGGGTGCTACTCTGCATGGCACGGTTaGTGGCCTCCACCAGGAAGT | + |
Preference number: 4 (lower is better) Translates to: DLDSKSTHRKAVPGMGCYSAWHG*WPPPGS Trigger: ACTTCCTGGTGGAGGCCATCAACCGTGCCATGCAGA...GTAGCACCCCATGCCTGGTACTGCCTTCCTGTGGGTTGACTTGCTATCTAAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR GCA 90 bp | CACACAAGGCAGCTGGGAGGTAGGTTTTGCAGCAACTACTATTGGACACAGGAGAGTCCTAGGTTCTGCTaGTGCTCCTGGGAGGCCCCT | + |
Preference number: 4 (lower is better) Translates to: HTRQLGGRFCSNYYWTQESPRFC*CSWEAP Trigger: AGGGGCCTCCCAGGAGCAGCAGCAGAACCTAGGACT...CTCCTGTGTCCAATAGTAGTTGCTGCAAAACCTACCTCCCAGCTGCCTTGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR GCA 90 bp | TCTCCAGGGGTAGGGACCTTACCTGGGAAGAGGGTGGTACCCCATTTCGATTCATGCAAGACAAGCTGCTaGACGCTTGTCGGAATCCCG | + |
Preference number: 4 (lower is better) Translates to: SPGVGTLPGKRVVPHFDSCKTSC*TLVGIP Trigger: CGGGATTCCGACAAGCGTGCAGCAGCTTGTCTTGCA...TGAATCGAAATGGGGTACCACCCTCTTCCCAGGTAAGGTCCCTACCCCTGGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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CDS-3UTR GCA 90 bp | GGCCCACTCCTGGCACAGGTCTCTGCCCTATACTTCGCTTCCTTTGCATGCCTGCATCAATGGACTCACTaGGTCCACCCCATTTGCTGT | + |
Preference number: 4 (lower is better) Translates to: GPLLAQVSALYFASFACLHQWTH*VHPICC Trigger: ACAGCAAATGGGGTGGACGCAGTGAGTCCATTGATG...CAGGCATGCAAAGGAAGCGAAGTATAGGGCAGAGACCTGTGCCAGGAGTGGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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CDS-3UTR GCA 90 bp | GGCTTCCACTGGCAGGGTTTGGATCCCAGGCAGGCAAGCAGGCAGGCTGGTGGATCCTGGTCACTGGACTaGATCAGTTCTATAAGATCA | + |
Preference number: 4 (lower is better) Translates to: GFHWQGLDPRQASRQAGGSWSLD*ISSIRS Trigger: TGATCTTATAGAACTGATGCAGTCCAGTGACCAGGA...TCCACCAGCCTGCCTGCTTGCCTGCCTGGGATCCAAACCCTGCCAGTGGAAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR CCA 90 bp | TGCGCTGACCTTCGAGGTCTACCCTGGGCTAACCCCTTCCGTGTAGGCTTGGTGTTTCCAGCAGGAAGTTaGAGATCTTGCCTCCATCTG | + |
Preference number: 4 (lower is better) Translates to: CADLRGLPWANPFRVGLVFPAGS*RSCLHL Trigger: CAGATGGAGGCAAGATCTCCAACTTCCTGCTGGAAA...CACCAAGCCTACACGGAAGGGGTTAGCCCAGGGTAGACCTCGAAGGTCAGCGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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CDS-3UTR CCA 90 bp | TCAACCCACAGGAAGGCAGTACCAGGCATGGGGTGCTACAGTGCTCATCCTCCATGTCCATCTTACGGCTaGTCAGCTTCTCTTGCAGCC | + |
Preference number: 4 (lower is better) Translates to: STHRKAVPGMGCYSAHPPCPSYG*SASLAA Trigger: GGCTGCAAGAGAAGCTGACCAGCCGTAAGATGGACA...TGGAGGATGAGCACTGTAGCACCCCATGCCTGGTACTGCCTTCCTGTGGGTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR CCA 90 bp | GATAAGATAACCAAGGCTTCCACTGGCAGGGTTTGGATCCCAGGCAGGCAAGCAGCACGAAGCAGGTGCTaGACACCCTGGCGTTCATCT | + |
Preference number: 4 (lower is better) Translates to: DKITKASTGRVWIPGRQAARSRC*TPWRSS Trigger: AGATGAACGCCAGGGTGTCCAGCACCTGCTTCGTGC...TGCTTGCCTGCCTGGGATCCAAACCCTGCCAGTGGAAGCCTTGGTTATCTTATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR CCA 90 bp | AGGCAGCTGGGAGGTAGGTTTTGCAGCAACTACTATTGGACACAGGAGAAAATGCAGGGGCTGCTCGAGTaGGAGCCTGCGCTGACCTTC | + |
Preference number: 4 (lower is better) Translates to: RQLGGRFCSNYYWTQEKMQGLLE*EPALTF Trigger: GAAGGTCAGCGCAGGCTCCCACTCGAGCAGCCCCTG...CATTTTCTCCTGTGTCCAATAGTAGTTGCTGCAAAACCTACCTCCCAGCTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000087605.13 |
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CDS-3UTR CCA 90 bp | TGTTACATACACACAAGGCAGCTGGGAGGTAGGTTTTGCAGCAACTACTATTGGCGGGCCATGTGTCCGTaGTTGGGGCTTAGGCCGGCC | + |
Preference number: 4 (lower is better) Translates to: CYIHTRQLGGRFCSNYYWRAMCP*LGLRPA Trigger: GGCCGGCCTAAGCCCCAACCACGGACACATGGCCCG...CCAATAGTAGTTGCTGCAAAACCTACCTCCCAGCTGCCTTGTGTGTATGTAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087605.13 |
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3UTR CAA 72 bp | TCCTGGCACAGGTCTCTGCCCTATACTTCGCTTCCTTaGCATGCCTGCCACACCCTGGTCAGGCACATTAAG | + |
Preference number: 4 (lower is better) Translates to: SWHRSLPYTSLP*HACHTLVRHIK Trigger: CTTAATGTGCCTGACCAGGGTGTGGCAGGCATGCAAAGGAAGCGAAGTATAGGGCAGAGACCTGTGCCAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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CDS-3UTR TCA 90 bp | CAAGTCAACCCACAGGAAGGCAGTACCAGGCATGGGGTGCTACAGTGCTCATCCGCTCTCCACCTCGACTaGACTGGATCTCAAAGTACT | + |
Preference number: 4 (lower is better) Translates to: QVNPQEGSTRHGVLQCSSALHLD*TGSQST Trigger: AGTACTTTGAGATCCAGTTCAGTCGAGGTGGAGAGC...GGATGAGCACTGTAGCACCCCATGCCTGGTACTGCCTTCCTGTGGGTTGACTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR TCA 90 bp | CCCACAGGAAGGCAGTACCAGGCATGGGGTGCTACAGTGCTCATCCTCCATACACCTCTTCTTGAAGGATaGAGAAGTCATCCTGTCGGG | + |
Preference number: 4 (lower is better) Translates to: PTGRQYQAWGATVLILHTPLLEG*RSHPVG Trigger: CCCGACAGGATGACTTCTTCATCCTTCAAGAAGAGG...TGTATGGAGGATGAGCACTGTAGCACCCCATGCCTGGTACTGCCTTCCTGTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087605.13 |
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CDS-3UTR GCA 90 bp | CTAACTCTGGGCAGTGCACAGCACTTTGCTCCCAGGGCAGGACATGATTTGTTACTGATGTTCCCCAGGTaGAAGATCCCTGCCACGAGC | + |
Preference number: 4 (lower is better) Translates to: LTLGSAQHFAPRAGHDLLLMFPR*KIPATS Trigger: GCTCGTGGCAGGGATCTTGCACCTGGGGAACATCAG...TAACAAATCATGTCCTGCCCTGGGAGCAAAGTGCTGTGCACTGCCCAGAGTTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR GCA 90 bp | GACTTAGATAGCAAGTCAACCCACAGGAAGGCAGTACCAGGCATGGGGTGCTACCTGGTCAGCTTCTCTTaGAGCCGCCCACTGTCTATG | + |
Preference number: 4 (lower is better) Translates to: DLDSKSTHRKAVPGMGCYLVSFS*SRPLSM Trigger: CATAGACAGTGGGCGGCTGCAAGAGAAGCTGACCAG...GTAGCACCCCATGCCTGGTACTGCCTTCCTGTGGGTTGACTTGCTATCTAAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR CCA 90 bp | ATGCTGATAGTGAGAGCTCGACCCCCAGCCTTGAGCACAGCCAAGTCACTTGTCATGTCTTTGACGTGCTaGACCTTGTCTCCCCCACCA | + |
Preference number: 4 (lower is better) Translates to: MLIVRARPPALSTAKSLVMSLTC*TLSPPP Trigger: TGGTGGGGGAGACAAGGTCCAGCACGTCAAAGACAT...GACAAGTGACTTGGCTGTGCTCAAGGCTGGGGGTCGAGCTCTCACTATCAGCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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CDS-3UTR CCA 90 bp | CTGGGCAGTGCACAGCACTTTGCTCCCAGGGCAGGACATGATTTGTTACATACATGGAGCCAGCAGTACTaGGGCGGCCCTTCTTGTCTA | + |
Preference number: 4 (lower is better) Translates to: LGSAQHFAPRAGHDLLHTWSQQY*GGPSCL Trigger: TAGACAAGAAGGGCCGCCCCAGTACTGCTGGCTCCA...TGTATGTAACAAATCATGTCCTGCCCTGGGAGCAAAGTGCTGTGCACTGCCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR CCA 90 bp | CCCACAGGAAGGCAGTACCAGGCATGGGGTGCTACAGTGCTCATCCTCCATACAACCTTTGCAGGAATTTaGAGAACTGCCGACGGTAGG | + |
Preference number: 4 (lower is better) Translates to: PTGRQYQAWGATVLILHTTFAGI*RTADGR Trigger: CCTACCGTCGGCAGTTCTCCAAATTCCTGCAAAGGT...TGTATGGAGGATGAGCACTGTAGCACCCCATGCCTGGTACTGCCTTCCTGTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR CCA 90 bp | CACACAAGGCAGCTGGGAGGTAGGTTTTGCAGCAACTACTATTGGACACAGGAGTTCGATTCAAACCTCTaGGAGGCCCAGGGGCTGCTC | + |
Preference number: 4 (lower is better) Translates to: HTRQLGGRFCSNYYWTQEFDSNL*EAQGLL Trigger: GAGCAGCCCCTGGGCCTCCCAGAGGTTTGAATCGAA...CTCCTGTGTCCAATAGTAGTTGCTGCAAAACCTACCTCCCAGCTGCCTTGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087605.13 |
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CDS-3UTR TCA 90 bp | ATGCTGATAGTGAGAGCTCGACCCCCAGCCTTGAGCACAGCCAAGTCACTTGTCTCTCACAGAAGCCACTaGCATCATAGGAGACCTTGC | + |
Preference number: 4 (lower is better) Translates to: MLIVRARPPALSTAKSLVSHRSH*HHRRPC Trigger: GCAAGGTCTCCTATGATGTCAGTGGCTTCTGTGAGA...GACAAGTGACTTGGCTGTGCTCAAGGCTGGGGGTCGAGCTCTCACTATCAGCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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CDS-3UTR TCA 90 bp | AGGCAGCTGGGAGGTAGGTTTTGCAGCAACTACTATTGGACACAGGAGAAAATGAGACCTTCCTGGCCATaGAGCCGACCCTTCCACCAG | + |
Preference number: 4 (lower is better) Translates to: RQLGGRFCSNYYWTQEKMRPSWP*SRPFHQ Trigger: CTGGTGGAAGGGTCGGCTTCATGGCCAGGAAGGTCT...CATTTTCTCCTGTGTCCAATAGTAGTTGCTGCAAAACCTACCTCCCAGCTGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087605.13 |
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CDS-3UTR GCA 90 bp | TCCAGGGGTAGGGACCTTACCTGGGAAGAGGGTGGTACCCCATTTCGATTCAAAGTCACGAGTGTAGGCTaGCTGTTCCACATTGAGGGT | + |
Preference number: 4 (lower is better) Translates to: SRGRDLTWEEGGTPFRFKVTSVG*LFHIEG Trigger: ACCCTCAATGTGGAACAGGCAGCCTACACTCGTGAC...TTTGAATCGAAATGGGGTACCACCCTCTTCCCAGGTAAGGTCCCTACCCCTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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CDS-3UTR GCA 90 bp | CTAACTCTGGGCAGTGCACAGCACTTTGCTCCCAGGGCAGGACATGATTTGTTACAGCGGATGCCCTCTTaGACATACTCCTCCTGCTCT | + |
Preference number: 4 (lower is better) Translates to: LTLGSAQHFAPRAGHDLLQRMPS*TYSSCS Trigger: AGAGCAGGAGGAGTATGTGCAAGAGGGCATCCGCTG...TAACAAATCATGTCCTGCCCTGGGAGCAAAGTGCTGTGCACTGCCCAGAGTTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR GCA 90 bp | CTGGGCAGTGCACAGCACTTTGCTCCCAGGGCAGGACATGATTTGTTACATACACAGCGGATGCCCTCTTaGACATACTCCTCCTGCTCT | + |
Preference number: 4 (lower is better) Translates to: LGSAQHFAPRAGHDLLHTQRMPS*TYSSCS Trigger: AGAGCAGGAGGAGTATGTGCAAGAGGGCATCCGCTG...TGTATGTAACAAATCATGTCCTGCCCTGGGAGCAAAGTGCTGTGCACTGCCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR GCA 90 bp | ACATACACACAAGGCAGCTGGGAGGTAGGTTTTGCAGCAACTACTATTGGACACCTCCAGCTGTTGAAGTaGTCGTGGGTGCCCACTGCC | + |
Preference number: 4 (lower is better) Translates to: TYTQGSWEVGFAATTIGHLQLLK*SWVPTA Trigger: GGCAGTGGGCACCCACGAGCACTTCAACAGCTGGAG...GTGTCCAATAGTAGTTGCTGCAAAACCTACCTCCCAGCTGCCTTGTGTGTATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR GCA 90 bp | GACTTAGATAGCAAGTCAACCCACAGGAAGGCAGTACCAGGCATGGGGTGCTACATACTTCGCTTCCTTTaGATGCCTGCCACACCCTGG | + |
Preference number: 4 (lower is better) Translates to: DLDSKSTHRKAVPGMGCYILRFL*MPATPW Trigger: CCAGGGTGTGGCAGGCATGCAAAGGAAGCGAAGTAT...GTAGCACCCCATGCCTGGTACTGCCTTCCTGTGGGTTGACTTGCTATCTAAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087605.13 |
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CDS-3UTR TCA 90 bp | AGGCAGCTGGGAGGTAGGTTTTGCAGCAACTACTATTGGACACAGGAGAAAATGTTGTCGGAATCCCGATaGCTTGCATGGCGCTCAGGG | + |
Preference number: 4 (lower is better) Translates to: RQLGGRFCSNYYWTQEKMLSESR*LAWRSG Trigger: CCCTGAGCGCCATGCAAGTCATCGGGATTCCGACAA...CATTTTCTCCTGTGTCCAATAGTAGTTGCTGCAAAACCTACCTCCCAGCTGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR TCA 90 bp | GATAAGATAACCAAGGCTTCCACTGGCAGGGTTTGGATCCCAGGCAGGCAAGCACGTTGGCTTGTTTCTTaGTCTTGGAGCCAGCAGTAC | + |
Preference number: 4 (lower is better) Translates to: DKITKASTGRVWIPGRQARWLVS*SWSQQY Trigger: GTACTGCTGGCTCCAAGATCAAGAAACAAGCCAACG...TGCTTGCCTGCCTGGGATCCAAACCCTGCCAGTGGAAGCCTTGGTTATCTTATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR TCA 90 bp | ACAAGGCAGCTGGGAGGTAGGTTTTGCAGCAACTACTATTGGACACAGGAGAAATTCTGTACTGTGCTCTaGAGGTGGCCGTGCTCGAGG | + |
Preference number: 4 (lower is better) Translates to: TRQLGGRFCSNYYWTQEKFCTVL*RWPCSR Trigger: CCTCGAGCACGGCCACCTTCAGAGCACAGTACAGAA...TTTCTCCTGTGTCCAATAGTAGTTGCTGCAAAACCTACCTCCCAGCTGCCTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087605.13 |
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CDS-3UTR GCA 90 bp | GACTTAGATAGCAAGTCAACCCACAGGAAGGCAGTACCAGGCATGGGGTGCTACCATCAATGGACTCACTaGGTCCACCCCATTTGCTGT | + |
Preference number: 4 (lower is better) Translates to: DLDSKSTHRKAVPGMGCYHQWTH*VHPICC Trigger: ACAGCAAATGGGGTGGACGCAGTGAGTCCATTGATG...GTAGCACCCCATGCCTGGTACTGCCTTCCTGTGGGTTGACTTGCTATCTAAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR GCA 90 bp | CACACAAGGCAGCTGGGAGGTAGGTTTTGCAGCAACTACTATTGGACACAGGAGGTCACGAGTGTAGGCTaGCTGTTCCACATTGAGGGT | + |
Preference number: 4 (lower is better) Translates to: HTRQLGGRFCSNYYWTQEVTSVG*LFHIEG Trigger: ACCCTCAATGTGGAACAGGCAGCCTACACTCGTGAC...CTCCTGTGTCCAATAGTAGTTGCTGCAAAACCTACCTCCCAGCTGCCTTGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR GCA 90 bp | AGGCAGCTGGGAGGTAGGTTTTGCAGCAACTACTATTGGACACAGGAGAAAATGTGGGGGTCCAGCGGATaGCCTCTTGCACATACTCCT | + |
Preference number: 4 (lower is better) Translates to: RQLGGRFCSNYYWTQEKMWGSSG*PLAHTP Trigger: AGGAGTATGTGCAAGAGGGCATCCGCTGGACCCCCA...CATTTTCTCCTGTGTCCAATAGTAGTTGCTGCAAAACCTACCTCCCAGCTGCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR CCA 90 bp | TGTTACATACACACAAGGCAGCTGGGAGGTAGGTTTTGCAGCAACTACTATTGGATCTCCACGCCACCGTaGCCATGTCTCAGGGGTCAG | + |
Preference number: 4 (lower is better) Translates to: CYIHTRQLGGRFCSNYYWISTPP*PCLRGQ Trigger: CTGACCCCTGAGACATGGCCACGGTGGCGTGGAGAT...CCAATAGTAGTTGCTGCAAAACCTACCTCCCAGCTGCCTTGTGTGTATGTAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR CCA 90 bp | CTAACTCTGGGCAGTGCACAGCACTTTGCTCCCAGGGCAGGACATGATTTGTTACTCCCCATCTGGTACTaGTCTGGCTCCATGTTGACA | + |
Preference number: 4 (lower is better) Translates to: LTLGSAQHFAPRAGHDLLLPIWY*SGSMLT Trigger: TGTCAACATGGAGCCAGACCAGTACCAGATGGGGAG...TAACAAATCATGTCCTGCCCTGGGAGCAAAGTGCTGTGCACTGCCCAGAGTTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR CCA 90 bp | ACATACACACAAGGCAGCTGGGAGGTAGGTTTTGCAGCAACTACTATTGGACACTTTCGGACTGCTACATaGCGCCGCCAGGCTTTCTGG | + |
Preference number: 4 (lower is better) Translates to: TYTQGSWEVGFAATTIGHFRTAT*RRQAFW Trigger: CCAGAAAGCCTGGCGGCGCCATGTAGCAGTCCGAAA...GTGTCCAATAGTAGTTGCTGCAAAACCTACCTCCCAGCTGCCTTGTGTGTATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR CCA 90 bp | CACACAAGGCAGCTGGGAGGTAGGTTTTGCAGCAACTACTATTGGACACAGGAGACCCCTCGGAGGGCCTaGATATCCAGTTTCTTCTTC | + |
Preference number: 4 (lower is better) Translates to: HTRQLGGRFCSNYYWTQETPRRA*ISSFFF Trigger: GAAGAAGAAACTGGATATCCAGGCCCTCCGAGGGGT...CTCCTGTGTCCAATAGTAGTTGCTGCAAAACCTACCTCCCAGCTGCCTTGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087605.13 |
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CDS-3UTR TCA 90 bp | CTGGGCAGTGCACAGCACTTTGCTCCCAGGGCAGGACATGATTTGTTACATACACGTTGGCTTGTTTCTTaGTCTTGGAGCCAGCAGTAC | + |
Preference number: 4 (lower is better) Translates to: LGSAQHFAPRAGHDLLHTRWLVS*SWSQQY Trigger: GTACTGCTGGCTCCAAGATCAAGAAACAAGCCAACG...TGTATGTAACAAATCATGTCCTGCCCTGGGAGCAAAGTGCTGTGCACTGCCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR GCA 90 bp | TATGAGGATCTCAATGACTTCGTTCACGTTAAAGCTCAGCTCATCCACATCCTGAGTCCTAGGTTCTGCTaGTGCTCCTGGGAGGCCCCT | + |
Preference number: 4 (lower is better) Translates to: YEDLNDFVHVKAQLIHILSPRFC*CSWEAP Trigger: AGGGGCCTCCCAGGAGCAGCAGCAGAACCTAGGACT...CAGGATGTGGATGAGCTGAGCTTTAACGTGAACGAAGTCATTGAGATCCTCATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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CDS-3UTR CCA 90 bp | CTAACTCTGGGCAGTGCACAGCACTTTGCTCCCAGGGCAGGACATGATTTGTTAACCTTTGCAGGAATTTaGAGAACTGCCGACGGTAGG | + |
Preference number: 4 (lower is better) Translates to: LTLGSAQHFAPRAGHDLLTFAGI*RTADGR Trigger: CCTACCGTCGGCAGTTCTCCAAATTCCTGCAAAGGT...TAACAAATCATGTCCTGCCCTGGGAGCAAAGTGCTGTGCACTGCCCAGAGTTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR TCA 90 bp | CAAGTCAACCCACAGGAAGGCAGTACCAGGCATGGGGTGCTACAGTGCTCATCCTCAGCTTGTTTTCGATaGGGTCACACACAATTTTGT | + |
Preference number: 4 (lower is better) Translates to: QVNPQEGSTRHGVLQCSSSACFR*GHTQFC Trigger: ACAAAATTGTGTGTGACCTCATCGAAAACAAGCTGA...GGATGAGCACTGTAGCACCCCATGCCTGGTACTGCCTTCCTGTGGGTTGACTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR GCA 90 bp | TCCAGGGGTAGGGACCTTACCTGGGAAGAGGGTGGTACCCCATTTCGATTCAAAGGATCTCAAAGTACTTaGCAAAGCGGCTGGAATTGT | + |
Preference number: 4 (lower is better) Translates to: SRGRDLTWEEGGTPFRFKGSQST*QSGWNC Trigger: ACAATTCCAGCCGCTTTGGCAAGTACTTTGAGATCC...TTTGAATCGAAATGGGGTACCACCCTCTTCCCAGGTAAGGTCCCTACCCCTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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CDS-3UTR CCA 90 bp | TATGAGGATCTCAATGACTTCGTTCACGTTAAAGCTCAGCTCATCCACATCCTGTTTCGGACTGCTACATaGCGCCGCCAGGCTTTCTGG | + |
Preference number: 4 (lower is better) Translates to: YEDLNDFVHVKAQLIHILFRTAT*RRQAFW Trigger: CCAGAAAGCCTGGCGGCGCCATGTAGCAGTCCGAAA...CAGGATGTGGATGAGCTGAGCTTTAACGTGAACGAAGTCATTGAGATCCTCATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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CDS-3UTR TCA 90 bp | ACATACACACAAGGCAGCTGGGAGGTAGGTTTTGCAGCAACTACTATTGGACACTCTCACAGAAGCCACTaGCATCATAGGAGACCTTGC | + |
Preference number: 4 (lower is better) Translates to: TYTQGSWEVGFAATTIGHSHRSH*HHRRPC Trigger: GCAAGGTCTCCTATGATGTCAGTGGCTTCTGTGAGA...GTGTCCAATAGTAGTTGCTGCAAAACCTACCTCCCAGCTGCCTTGTGTGTATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR TCA 90 bp | AGGCAGCTGGGAGGTAGGTTTTGCAGCAACTACTATTGGACACAGGAGAAAATGTCCGCAGCCTCTTCTTaGAGGATGAAGAAGTCATCC | + |
Preference number: 4 (lower is better) Translates to: RQLGGRFCSNYYWTQEKMSAASS*RMKKSS Trigger: GGATGACTTCTTCATCCTTCAAGAAGAGGCTGCGGA...CATTTTCTCCTGTGTCCAATAGTAGTTGCTGCAAAACCTACCTCCCAGCTGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087605.13 |
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CDS-3UTR GCA 90 bp | CTGGGCAGTGCACAGCACTTTGCTCCCAGGGCAGGACATGATTTGTTACATACAGGATCTCAAAGTACTTaGCAAAGCGGCTGGAATTGT | + |
Preference number: 4 (lower is better) Translates to: LGSAQHFAPRAGHDLLHTGSQST*QSGWNC Trigger: ACAATTCCAGCCGCTTTGGCAAGTACTTTGAGATCC...TGTATGTAACAAATCATGTCCTGCCCTGGGAGCAAAGTGCTGTGCACTGCCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR GCA 90 bp | TCATCCACATCCTGGCCTATGTATTGGTACAGTGCCCGGCACCTCGGGCCATGTAGCTCAATAAAAATCTaGTGCAGCTTTTCATTGACG | + |
Preference number: 4 (lower is better) Translates to: SSTSWPMYWYSARHLGPCSSIKI*CSFSLT Trigger: CGTCAATGAAAAGCTGCAGCAGATTTTTATTGAGCT...ACATGGCCCGAGGTGCCGGGCACTGTACCAATACATAGGCCAGGATGTGGATGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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CDS-3UTR GCA 90 bp | CTGGGCAGTGCACAGCACTTTGCTCCCAGGGCAGGACATGATTTGTTACATACAATAGGAGACCTTGCCTaGATAGTGATGGATGACGAA | + |
Preference number: 4 (lower is better) Translates to: LGSAQHFAPRAGHDLLHTIGDLA*IVMDDE Trigger: TTCGTCATCCATCACTATGCAGGCAAGGTCTCCTAT...TGTATGTAACAAATCATGTCCTGCCCTGGGAGCAAAGTGCTGTGCACTGCCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR GCA 90 bp | GATAAGATAACCAAGGCTTCCACTGGCAGGGTTTGGATCCCAGGCAGGCAAGCATCCTGGTCACTGGACTaGATCAGTTCTATAAGATCA | + |
Preference number: 4 (lower is better) Translates to: DKITKASTGRVWIPGRQASWSLD*ISSIRS Trigger: TGATCTTATAGAACTGATGCAGTCCAGTGACCAGGA...TGCTTGCCTGCCTGGGATCCAAACCCTGCCAGTGGAAGCCTTGGTTATCTTATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR GCA 90 bp | CTGGGCAGTGCACAGCACTTTGCTCCCAGGGCAGGACATGATTTGTTACATACAAGGATGGCATACCTTTaGAGGAATTTGGAGAACTGC | + |
Preference number: 4 (lower is better) Translates to: LGSAQHFAPRAGHDLLHTRMAYL*RNLENC Trigger: GCAGTTCTCCAAATTCCTGCAAAGGTATGCCATCCT...TGTATGTAACAAATCATGTCCTGCCCTGGGAGCAAAGTGCTGTGCACTGCCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR CCA 90 bp | CACAGAAGGCTGACAAACTCGGTCTTGAAGATACTTTCTAAGAAGCTGTCCGCAGATCTTGCCTCCATCTaGCTCTCCACCTCGACTGAA | + |
Preference number: 4 (lower is better) Translates to: HRRLTNSVLKILSKKLSADLASI*LSTSTE Trigger: TTCAGTCGAGGTGGAGAGCCAGATGGAGGCAAGATC...TGCGGACAGCTTCTTAGAAAGTATCTTCAAGACCGAGTTTGTCAGCCTTCTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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CDS-3UTR CCA 90 bp | TGTTACATACACACAAGGCAGCTGGGAGGTAGGTTTTGCAGCAACTACTATTGGCTCCCCATCTGGTACTaGTCTGGCTCCATGTTGACA | + |
Preference number: 4 (lower is better) Translates to: CYIHTRQLGGRFCSNYYWLPIWY*SGSMLT Trigger: TGTCAACATGGAGCCAGACCAGTACCAGATGGGGAG...CCAATAGTAGTTGCTGCAAAACCTACCTCCCAGCTGCCTTGTGTGTATGTAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR CCA 90 bp | ACAAGGCAGCTGGGAGGTAGGTTTTGCAGCAACTACTATTGGACACAGGAGAAACTCCACATAGTTTCCTaGAAAGAGACCTTCCTGGCC | + |
Preference number: 4 (lower is better) Translates to: TRQLGGRFCSNYYWTQEKLHIVS*KETFLA Trigger: GGCCAGGAAGGTCTCTTTCCAGGAAACTATGTGGAG...TTTCTCCTGTGTCCAATAGTAGTTGCTGCAAAACCTACCTCCCAGCTGCCTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087605.13 |
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CDS-3UTR TCA 90 bp | TGTTACATACACACAAGGCAGCTGGGAGGTAGGTTTTGCAGCAACTACTATTGGGCTCTCCACCTCGACTaGACTGGATCTCAAAGTACT | + |
Preference number: 4 (lower is better) Translates to: CYIHTRQLGGRFCSNYYWALHLD*TGSQST Trigger: AGTACTTTGAGATCCAGTTCAGTCGAGGTGGAGAGC...CCAATAGTAGTTGCTGCAAAACCTACCTCCCAGCTGCCTTGTGTGTATGTAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR GCA 90 bp | TCAATGACTTCGTTCACGTTAAAGCTCAGCTCATCCACATCCTGGCCTATGTATAGGTACTCCACCTGGTaGTTCACTCTGCTTTCCTCC | + |
Preference number: 4 (lower is better) Translates to: SMTSFTLKLSSSTSWPMYRYSTW*FTLLSS Trigger: GGAGGAAAGCAGAGTGAAGCACCAGGTGGAGTACCT...ATACATAGGCCAGGATGTGGATGAGCTGAGCTTTAACGTGAACGAAGTCATTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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CDS-3UTR TCA 90 bp | CTGGGCAGTGCACAGCACTTTGCTCCCAGGGCAGGACATGATTTGTTACATACATCAGCTTGTTTTCGATaGGGTCACACACAATTTTGT | + |
Preference number: 4 (lower is better) Translates to: LGSAQHFAPRAGHDLLHTSACFR*GHTQFC Trigger: ACAAAATTGTGTGTGACCTCATCGAAAACAAGCTGA...TGTATGTAACAAATCATGTCCTGCCCTGGGAGCAAAGTGCTGTGCACTGCCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR CCA 90 bp | TGTTACATACACACAAGGCAGCTGGGAGGTAGGTTTTGCAGCAACTACTATTGGTTTCCAGCAGGAAGTTaGAGATCTTGCCTCCATCTG | + |
Preference number: 4 (lower is better) Translates to: CYIHTRQLGGRFCSNYYWFPAGS*RSCLHL Trigger: CAGATGGAGGCAAGATCTCCAACTTCCTGCTGGAAA...CCAATAGTAGTTGCTGCAAAACCTACCTCCCAGCTGCCTTGTGTGTATGTAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR GCA 90 bp | TATGAGGATCTCAATGACTTCGTTCACGTTAAAGCTCAGCTCATCCACATCCTGAGGATGGCATACCTTTaGAGGAATTTGGAGAACTGC | + |
Preference number: 4 (lower is better) Translates to: YEDLNDFVHVKAQLIHILRMAYL*RNLENC Trigger: GCAGTTCTCCAAATTCCTGCAAAGGTATGCCATCCT...CAGGATGTGGATGAGCTGAGCTTTAACGTGAACGAAGTCATTGAGATCCTCATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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CDS-3UTR GCA 90 bp | TGTTACATACACACAAGGCAGCTGGGAGGTAGGTTTTGCAGCAACTACTATTGGAGCTCAATAAAAATCTaGTGCAGCTTTTCATTGACG | + |
Preference number: 4 (lower is better) Translates to: CYIHTRQLGGRFCSNYYWSSIKI*CSFSLT Trigger: CGTCAATGAAAAGCTGCAGCAGATTTTTATTGAGCT...CCAATAGTAGTTGCTGCAAAACCTACCTCCCAGCTGCCTTGTGTGTATGTAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR CAA 90 bp | CGTGCTCGAGGACGTCTGCTGGCTCCTAGGGTTGAGGATGGAGGGCCCCGTGGACTGCGTCCACCCCATTaGCTGTCCATCTTACGGCTG | + |
Preference number: 5 (lower is better) Translates to: RARGRLLAPRVEDGGPRGLRPPH*LSILRL Trigger: CAGCCGTAAGATGGACAGCAAATGGGGTGGACGCAG...TCCACGGGGCCCTCCATCCTCAACCCTAGGAGCCAGCAGACGTCCTCGAGCACG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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CDS-3UTR CAA 90 bp | CACTGGCAGGGTTTGGATCCCAGGCAGGCAAGCAGGCAGGCTGGTGGATGGACGGCTCGACCCCCAGCCTaGAGCACAGCCAAGTCACTT | + |
Preference number: 5 (lower is better) Translates to: HWQGLDPRQASRQAGGWTARPPA*STAKSL Trigger: AAGTGACTTGGCTGTGCTCAAGGCTGGGGGTCGAGC...CGTCCATCCACCAGCCTGCCTGCTTGCCTGCCTGGGATCCAAACCCTGCCAGTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087605.13 |
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CDS-3UTR CAA 90 bp | GGCTTCCACTGGCAGGGTTTGGATCCCAGGCAGGCAAGCAGGCAGGCTGGTGGAGCTGGTCAGCTTCTCTaGCAGCCGCCCACTGTCTAT | + |
Preference number: 5 (lower is better) Translates to: GFHWQGLDPRQASRQAGGAGQLL*QPPTVY Trigger: ATAGACAGTGGGCGGCTGCAAGAGAAGCTGACCAGC...TCCACCAGCCTGCCTGCTTGCCTGCCTGGGATCCAAACCCTGCCAGTGGAAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR CAA 90 bp | CCCACAGGAAGGCAGTACCAGGCATGGGGTGCTACAGTGCTCATCCTCCATACACCCGCGCTCCAGCTGTaGAAGTGCTCGTGGGTGCCC | + |
Preference number: 5 (lower is better) Translates to: PTGRQYQAWGATVLILHTPALQL*KCSWVP Trigger: GGGCACCCACGAGCACTTCAACAGCTGGAGCGCGGG...TGTATGGAGGATGAGCACTGTAGCACCCCATGCCTGGTACTGCCTTCCTGTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR CAA 90 bp | CACAGGTCTCTGCCCTATACTTCGCTTCCTTTGCATGCCTGCCACACCCTGGTCCCCGCGCTCCAGCTGTaGAAGTGCTCGTGGGTGCCC | + |
Preference number: 5 (lower is better) Translates to: HRSLPYTSLPLHACHTLVPALQL*KCSWVP Trigger: GGGCACCCACGAGCACTTCAACAGCTGGAGCGCGGG...GACCAGGGTGTGGCAGGCATGCAAAGGAAGCGAAGTATAGGGCAGAGACCTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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CDS GCA 90 bp | CCCATCTGGTACTGGTCTGGCTCCATGTTGACAGCACGAAGCAGGTaGTGGACACCCTGGCGTTCATCTCCACGCCACCGTGGCCATGTC | + |
Preference number: 5 (lower is better) Translates to: PIWYWSGSMLTARSR*WTPWRSSPRHRGHV Trigger: GACATGGCCACGGTGGCGTGGAGATGAACGCCAGGGTGTCCAGCACCTGCTTCGTGCTGTCAACATGGAGCCAGACCAGTACCAGATGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR CAA 90 bp | CACTGGCAGGGTTTGGATCCCAGGCAGGCAAGCAGGCAGGCTGGTGGATGGACGCCAAAGCGGCTGGAATaGTTGTTGCGCACGGTCTTG | + |
Preference number: 5 (lower is better) Translates to: HWQGLDPRQASRQAGGWTPKRLE*LLRTVL Trigger: CAAGACCGTGCGCAACAACAATTCCAGCCGCTTTGG...CGTCCATCCACCAGCCTGCCTGCTTGCCTGCCTGGGATCCAAACCCTGCCAGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR CAA 90 bp | CGTGCTCGAGGACGTCTGCTGGCTCCTAGGGTTGAGGATGGAGGGCCCCGTGGACACCAGGTCGTTGGCTaGTTTCTTGATCTTGGAGCC | + |
Preference number: 5 (lower is better) Translates to: RARGRLLAPRVEDGGPRGHQVVG*FLDLGA Trigger: GGCTCCAAGATCAAGAAACAAGCCAACGACCTGGTG...TCCACGGGGCCCTCCATCCTCAACCCTAGGAGCCAGCAGACGTCCTCGAGCACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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CDS GCA 90 bp | TTCCCCAGGTGCAAGATCCCTGCCACGAGCTGCAAGACAAGCTGCTaGACGCTTGTCGGAATCCCGATGACTTGCATGGCGCTCAGGGTC | + |
Preference number: 5 (lower is better) Translates to: FPRCKIPATSCKTSC*TLVGIPMTCMALRV Trigger: GACCCTGAGCGCCATGCAAGTCATCGGGATTCCGACAAGCGTGCAGCAGCTTGTCTTGCAGCTCGTGGCAGGGATCTTGCACCTGGGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS GCA 90 bp | ATGTTCCCCAGGTGCAAGATCCCTGCCACGAGCTGCAAGACAAGCTaGTGCACGCTTGTCGGAATCCCGATGACTTGCATGGCGCTCAGG | + |
Preference number: 5 (lower is better) Translates to: MFPRCKIPATSCKTS*CTLVGIPMTCMALR Trigger: CCTGAGCGCCATGCAAGTCATCGGGATTCCGACAAGCGTGCAGCAGCTTGTCTTGCAGCTCGTGGCAGGGATCTTGCACCTGGGGAACAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS GCA 90 bp | GAGGCGGGCATAGAGTCCCTTGGCCAGTGCGTCACGAGTGTAGGCTaGCTGTTCCACATTGAGGGTCACATCAATGGACTCACTGCGTCC | + |
Preference number: 5 (lower is better) Translates to: EAGIESLGQCVTSVG*LFHIEGHINGLTAS Trigger: GGACGCAGTGAGTCCATTGATGTGACCCTCAATGTGGAACAGGCAGCCTACACTCGTGACGCACTGGCCAAGGGACTCTATGCCCGCCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS GCA 90 bp | ATACCTTTGCAGGAATTTGGAGAACTGCCGACGGTAGGCGAAGCCTaGCCTTCGCACTCGGATGTTCTCCCGCAGGCCCAGGTACTCCAC | + |
Preference number: 5 (lower is better) Translates to: IPLQEFGELPTVGEA*PSHSDVLPQAQVLH Trigger: GTGGAGTACCTGGGCCTGCGGGAGAACATCCGAGTGCGAAGGGCAGGCTTCGCCTACCGTCGGCAGTTCTCCAAATTCCTGCAAAGGTAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR CAA 90 bp | AGTCAACCCACAGGAAGGCAGTACCAGGCATGGGGTGCTACAGTGCTCATCCTCTTGACGTGCTGGACCTaGTCTCCCCCACCAGACACC | + |
Preference number: 5 (lower is better) Translates to: SQPTGRQYQAWGATVLILLTCWT*SPPPDT Trigger: GGTGTCTGGTGGGGGAGACAAGGTCCAGCACGTCAA...GAGGATGAGCACTGTAGCACCCCATGCCTGGTACTGCCTTCCTGTGGGTTGACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR CAA 90 bp | CAAGTCAACCCACAGGAAGGCAGTACCAGGCATGGGGTGCTACAGTGCTCATCCCGGAATCCCGATGACTaGCATGGCGCTCAGGGTCTC | + |
Preference number: 5 (lower is better) Translates to: QVNPQEGSTRHGVLQCSSRNPDD*HGAQGL Trigger: GAGACCCTGAGCGCCATGCAAGTCATCGGGATTCCG...GGATGAGCACTGTAGCACCCCATGCCTGGTACTGCCTTCCTGTGGGTTGACTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR CAA 90 bp | GGCTTCCACTGGCAGGGTTTGGATCCCAGGCAGGCAAGCAGGCAGGCTGGTGGAGTGGACACCAGGTCGTaGGCTTGTTTCTTGATCTTG | + |
Preference number: 5 (lower is better) Translates to: GFHWQGLDPRQASRQAGGVDTRS*ACFLIL Trigger: CAAGATCAAGAAACAAGCCAACGACCTGGTGTCCAC...TCCACCAGCCTGCCTGCTTGCCTGCCTGGGATCCAAACCCTGCCAGTGGAAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR CAA 90 bp | CACACAAGGCAGCTGGGAGGTAGGTTTTGCAGCAACTACTATTGGACACAGGAGGCCATGTGTCCGTGGTaGGGGCTTAGGCCGGCCCAC | + |
Preference number: 5 (lower is better) Translates to: HTRQLGGRFCSNYYWTQEAMCPW*GLRPAH Trigger: GTGGGCCGGCCTAAGCCCCAACCACGGACACATGGC...CTCCTGTGTCCAATAGTAGTTGCTGCAAAACCTACCTCCCAGCTGCCTTGTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087605.13 |
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CDS GCA 90 bp | CCATCTTACGGCTGGTCAGCTTCTCTTGCAGCCGCCCACTGTCTATaGCCAGCAGGTAGGCTGGGAAAGCTAAGAGGTCTACGCTCTCCA | + |
Preference number: 5 (lower is better) Translates to: PSYGWSASLAAAHCL*PAGRLGKLRGLRSP Trigger: TGGAGAGCGTAGACCTCTTAGCTTTCCCAGCCTACCTGCTGGGCATAGACAGTGGGCGGCTGCAAGAGAAGCTGACCAGCCGTAAGATGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS CCA 90 bp | CAATGGACTCACTGCGTCCACCCCATTTGCTGTCCATCTTACGGCTaGTCAGCTTCTCTTGCAGCCGCCCACTGTCTATGCCCAGCAGGT | + |
Preference number: 5 (lower is better) Translates to: QWTHCVHPICCPSYG*SASLAAAHCLCPAG Trigger: ACCTGCTGGGCATAGACAGTGGGCGGCTGCAAGAGAAGCTGACCAGCCGTAAGATGGACAGCAAATGGGGTGGACGCAGTGAGTCCATTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS CCA 90 bp | ACGAAGCAGGTGCTGGACACCCTGGCGTTCATCTCCACGCCACCGTaGCCATGTCTCAGGGGTCAGGATGGCATACCTTTGCAGGAATTT | + |
Preference number: 5 (lower is better) Translates to: TKQVLDTLAFISTPP*PCLRGQDGIPLQEF Trigger: AAATTCCTGCAAAGGTATGCCATCCTGACCCCTGAGACATGGCCACGGTGGCGTGGAGATGAACGCCAGGGTGTCCAGCACCTGCTTCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR CAA 90 bp | CAAGTCAACCCACAGGAAGGCAGTACCAGGCATGGGGTGCTACAGTGCTCATCCCTGCGTCCACCCCATTaGCTGTCCATCTTACGGCTG | + |
Preference number: 5 (lower is better) Translates to: QVNPQEGSTRHGVLQCSSLRPPH*LSILRL Trigger: CAGCCGTAAGATGGACAGCAAATGGGGTGGACGCAG...GGATGAGCACTGTAGCACCCCATGCCTGGTACTGCCTTCCTGTGGGTTGACTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR CAA 90 bp | TCAACCCACAGGAAGGCAGTACCAGGCATGGGGTGCTACAGTGCTCATCCTCCATTCTGCATGGCACGGTaGATGGCCTCCACCAGGAAG | + |
Preference number: 5 (lower is better) Translates to: STHRKAVPGMGCYSAHPPFCMAR*MASTRK Trigger: CTTCCTGGTGGAGGCCATCAACCGTGCCATGCAGAA...TGGAGGATGAGCACTGTAGCACCCCATGCCTGGTACTGCCTTCCTGTGGGTTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR CAA 90 bp | TTCTTCACCCGGAACTGTAGTAGGTCACTGAAGGTGAGGGGAAGGGGCCTGCGCAAGCGGCGGTCATACTaGGTGACTGAGTCGGCAAAG | + |
Preference number: 5 (lower is better) Translates to: FFTRNCSRSLKVRGRGLRKRRSY*VTESAK Trigger: CTTTGCCGACTCAGTCACCAAGTATGACCGCCGCTT...GCGCAGGCCCCTTCCCCTCACCTTCAGTGACCTACTACAGTTCCGGGTGAAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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CDS-3UTR CAA 90 bp | CTTCCACTGGCAGGGTTTGGATCCCAGGCAGGCAAGCAGGCAGGCTGGTGGATGGTCCGCAGCCTCTTCTaGAAGGATGAAGAAGTCATC | + |
Preference number: 5 (lower is better) Translates to: LPLAGFGSQAGKQAGWWMVRSLF*KDEEVI Trigger: GATGACTTCTTCATCCTTCAAGAAGAGGCTGCGGAC...CATCCACCAGCCTGCCTGCTTGCCTGCCTGGGATCCAAACCCTGCCAGTGGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087605.13 |
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CDS-3UTR CAA 90 bp | TCATCCACATCCTGGCCTATGTATTGGTACAGTGCCCGGCACCTCGGGCCATGTAGGCCAGGTCTCACCTaGAAGCGGCGGTCATACTTG | + |
Preference number: 5 (lower is better) Translates to: SSTSWPMYWYSARHLGPCRPGLT*KRRSYL Trigger: CAAGTATGACCGCCGCTTCAAGGTGAGACCTGGCCT...ACATGGCCCGAGGTGCCGGGCACTGTACCAATACATAGGCCAGGATGTGGATGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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CDS TCA 90 bp | GTCCCTTGGCCAGTGCGTCACGAGTGTAGGCTGCCTGTTCCACATTaGGGGTCACATCAATGGACTCACTGCGTCCACCCCATTTGCTGT | + |
Preference number: 5 (lower is better) Translates to: VPWPVRHECRLPVPH*GSHQWTHCVHPICC Trigger: ACAGCAAATGGGGTGGACGCAGTGAGTCCATTGATGTGACCCTCAATGTGGAACAGGCAGCCTACACTCGTGACGCACTGGCCAAGGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR CAA 90 bp | TCAACCCACAGGAAGGCAGTACCAGGCATGGGGTGCTACAGTGCTCATCCTCCAAAGCGGCGGTCATACTaGGTGACTGAGTCGGCAAAG | + |
Preference number: 5 (lower is better) Translates to: STHRKAVPGMGCYSAHPPKRRSY*VTESAK Trigger: CTTTGCCGACTCAGTCACCAAGTATGACCGCCGCTT...TGGAGGATGAGCACTGTAGCACCCCATGCCTGGTACTGCCTTCCTGTGGGTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS TCA 90 bp | GGTCTACGCTCTCCACGCGGGCATAATTCCCTTCTTCACAGAAGCTaGTGTTCCCCAGGTGCAAGATCCCTGCCACGAGCTGCAAGACAA | + |
Preference number: 5 (lower is better) Translates to: GLRSPRGHNSLLHRS*CSPGARSLPRAARQ Trigger: TTGTCTTGCAGCTCGTGGCAGGGATCTTGCACCTGGGGAACATCAGCTTCTGTGAAGAAGGGAATTATGCCCGCGTGGAGAGCGTAGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR CAA 90 bp | CTAACTCTGGGCAGTGCACAGCACTTTGCTCCCAGGGCAGGACATGATTTGTTATTGACGTGCTGGACCTaGTCTCCCCCACCAGACACC | + |
Preference number: 5 (lower is better) Translates to: LTLGSAQHFAPRAGHDLLLTCWT*SPPPDT Trigger: GGTGTCTGGTGGGGGAGACAAGGTCCAGCACGTCAA...TAACAAATCATGTCCTGCCCTGGGAGCAAAGTGCTGTGCACTGCCCAGAGTTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR CAA 90 bp | GTTGAGGATGGAGGGCCCCGTGGAGGCCTCTGGGAACTCCTACCAGATGTGATCTTTTCCAGCAGGAAGTaGGAGATCTTGCCTCCATCT | + |
Preference number: 5 (lower is better) Translates to: VEDGGPRGGLWELLPDVIFSSRK*EILPPS Trigger: AGATGGAGGCAAGATCTCCAACTTCCTGCTGGAAAA...GATCACATCTGGTAGGAGTTCCCAGAGGCCTCCACGGGGCCCTCCATCCTCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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CDS-3UTR CAA 90 bp | GATAAGATAACCAAGGCTTCCACTGGCAGGGTTTGGATCCCAGGCAGGCAAGCAGCTGGTCAGCTTCTCTaGCAGCCGCCCACTGTCTAT | + |
Preference number: 5 (lower is better) Translates to: DKITKASTGRVWIPGRQAAGQLL*QPPTVY Trigger: ATAGACAGTGGGCGGCTGCAAGAGAAGCTGACCAGC...TGCTTGCCTGCCTGGGATCCAAACCCTGCCAGTGGAAGCCTTGGTTATCTTATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR CAA 90 bp | CAAGTCAACCCACAGGAAGGCAGTACCAGGCATGGGGTGCTACAGTGCTCATCCGCTGCCTGTTCCACATaGAGGGTCACATCAATGGAC | + |
Preference number: 5 (lower is better) Translates to: QVNPQEGSTRHGVLQCSSAACST*RVTSMD Trigger: GTCCATTGATGTGACCCTCAATGTGGAACAGGCAGC...GGATGAGCACTGTAGCACCCCATGCCTGGTACTGCCTTCCTGTGGGTTGACTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR CAA 90 bp | CAAGTCAACCCACAGGAAGGCAGTACCAGGCATGGGGTGCTACAGTGCTCATCCCACCAGGTCGTTGGCTaGTTTCTTGATCTTGGAGCC | + |
Preference number: 5 (lower is better) Translates to: QVNPQEGSTRHGVLQCSSHQVVG*FLDLGA Trigger: GGCTCCAAGATCAAGAAACAAGCCAACGACCTGGTG...GGATGAGCACTGTAGCACCCCATGCCTGGTACTGCCTTCCTGTGGGTTGACTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR CAA 90 bp | AACCAAGGCTTCCACTGGCAGGGTTTGGATCCCAGGCAGGCAAGCAGGCAGGCTCCTCAAGCAGTGGGTTaGACTGTAGGATTATGTCTT | + |
Preference number: 5 (lower is better) Translates to: NQGFHWQGLDPRQASRQAPQAVG*TVGLCL Trigger: AAGACATAATCCTACAGTCAAACCCACTGCTTGAGG...AGCCTGCCTGCTTGCCTGCCTGGGATCCAAACCCTGCCAGTGGAAGCCTTGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR CAA 90 bp | TGCGCTGACCTTCGAGGTCTACCCTGGGCTAACCCCTTCCGTGTAGGCTTGGTGCCTCAAGCAGTGGGTTaGACTGTAGGATTATGTCTT | + |
Preference number: 5 (lower is better) Translates to: CADLRGLPWANPFRVGLVPQAVG*TVGLCL Trigger: AAGACATAATCCTACAGTCAAACCCACTGCTTGAGG...CACCAAGCCTACACGGAAGGGGTTAGCCCAGGGTAGACCTCGAAGGTCAGCGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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CDS-3UTR CAA 90 bp | TCATCCACATCCTGGCCTATGTATTGGTACAGTGCCCGGCACCTCGGGCCATGTGTGGACACCAGGTCGTaGGCTTGTTTCTTGATCTTG | + |
Preference number: 5 (lower is better) Translates to: SSTSWPMYWYSARHLGPCVDTRS*ACFLIL Trigger: CAAGATCAAGAAACAAGCCAACGACCTGGTGTCCAC...ACATGGCCCGAGGTGCCGGGCACTGTACCAATACATAGGCCAGGATGTGGATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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CDS-3UTR CAA 90 bp | AGTCAACCCACAGGAAGGCAGTACCAGGCATGGGGTGCTACAGTGCTCATCCTCGCCTCTTCAAAACGCTaGCACAGAAGGCTGACAAAC | + |
Preference number: 5 (lower is better) Translates to: SQPTGRQYQAWGATVLILASSKR*HRRLTN Trigger: GTTTGTCAGCCTTCTGTGCAAGCGTTTTGAAGAGGC...GAGGATGAGCACTGTAGCACCCCATGCCTGGTACTGCCTTCCTGTGGGTTGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087605.13 |
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CDS-3UTR CAA 90 bp | TGTTACATACACACAAGGCAGCTGGGAGGTAGGTTTTGCAGCAACTACTATTGGTGCTGGCTCCTAGGGTaGAGGATGGAGGGCCCCGTG | + |
Preference number: 5 (lower is better) Translates to: CYIHTRQLGGRFCSNYYWCWLLG*RMEGPV Trigger: CACGGGGCCCTCCATCCTCAACCCTAGGAGCCAGCA...CCAATAGTAGTTGCTGCAAAACCTACCTCCCAGCTGCCTTGTGTGTATGTAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087605.13 |
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CDS TCA 90 bp | ACTGGTTCTCACAGTCGATCAGCATATTCCGGTACATGTTGTCGGTaGGGGCATAGATGTGCGGGGGATTCTCATATTGAGCCGCGCCCT | + |
Preference number: 5 (lower is better) Translates to: TGSHSRSAYSGTCCR*GHRCAGDSHIEPRP Trigger: AGGGCGCGGCTCAATATGAGAATCCCCCGCACATCTATGCCCTCACCGACAACATGTACCGGAATATGCTGATCGACTGTGAGAACCAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS CCA 90 bp | ATCTCTTCATACTTTCGGACTGCTACATGGCGCCGCCAGGCTTTCTaGATAGTGCGAGCGAAGCCGTCAAACTTCCTCTCTCGCATCTCT | + |
Preference number: 5 (lower is better) Translates to: ISSYFRTATWRRQAF*IVRAKPSNFLSRIS Trigger: AGAGATGCGAGAGAGGAAGTTTGACGGCTTCGCTCGCACTATCCAGAAAGCCTGGCGGCGCCATGTAGCAGTCCGAAAGTATGAAGAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS CCA 90 bp | TTAGAAGCTTCTTCCCGCATCTCTTCATACTTTCGGACTGCTACATaGCGCCGCCAGGCTTTCTGGATAGTGCGAGCGAAGCCGTCAAAC | + |
Preference number: 5 (lower is better) Translates to: LEASSRISSYFRTAT*RRQAFWIVRAKPSN Trigger: GTTTGACGGCTTCGCTCGCACTATCCAGAAAGCCTGGCGGCGCCATGTAGCAGTCCGAAAGTATGAAGAGATGCGGGAAGAAGCTTCTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR CAA 90 bp | ACAAGGCAGCTGGGAGGTAGGTTTTGCAGCAACTACTATTGGACACAGGAGAAACGGAATCCCGATGACTaGCATGGCGCTCAGGGTCTC | + |
Preference number: 5 (lower is better) Translates to: TRQLGGRFCSNYYWTQEKRNPDD*HGAQGL Trigger: GAGACCCTGAGCGCCATGCAAGTCATCGGGATTCCG...TTTCTCCTGTGTCCAATAGTAGTTGCTGCAAAACCTACCTCCCAGCTGCCTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR CAA 90 bp | GGCTTCCACTGGCAGGGTTTGGATCCCAGGCAGGCAAGCAGGCAGGCTGGTGGAAGGTCACACACAATTTaGTTGTTGAAGTATTCGATG | + |
Preference number: 5 (lower is better) Translates to: GFHWQGLDPRQASRQAGGRSHTI*LLKYSM Trigger: CATCGAATACTTCAACAACAAAATTGTGTGTGACCT...TCCACCAGCCTGCCTGCTTGCCTGCCTGGGATCCAAACCCTGCCAGTGGAAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR CAA 90 bp | CAAGTCAACCCACAGGAAGGCAGTACCAGGCATGGGGTGCTACAGTGCTCATCCTCGTTGGCTTGTTTCTaGATCTTGGAGCCAGCAGTA | + |
Preference number: 5 (lower is better) Translates to: QVNPQEGSTRHGVLQCSSSLACF*ILEPAV Trigger: TACTGCTGGCTCCAAGATCAAGAAACAAGCCAACGA...GGATGAGCACTGTAGCACCCCATGCCTGGTACTGCCTTCCTGTGGGTTGACTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS TCA 90 bp | TGCCGAAAGCCTCAAGCAGTGGGTTTGACTGTAGGATTATGTCTTTaGCGTGCTGGACCTTGTCTCCCCCACCAGACACCTTGGAGATGT | + |
Preference number: 5 (lower is better) Translates to: CRKPQAVGLTVGLCL*RAGPCLPHQTPWRC Trigger: ACATCTCCAAGGTGTCTGGTGGGGGAGACAAGGTCCAGCACGTCAAAGACATAATCCTACAGTCAAACCCACTGCTTGAGGCTTTCGGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS GCA 90 bp | TCGATTCCTCTCACAGAAGCCACTGACATCATAGGAGACCTTGCCTaGATAGTGATGGATGACGAAACCCGCGCTCCAGCTGTTGAAGTG | + |
Preference number: 5 (lower is better) Translates to: SIPLTEATDIIGDLA*IVMDDETRAPAVEV Trigger: CACTTCAACAGCTGGAGCGCGGGTTTCGTCATCCATCACTATGCAGGCAAGGTCTCCTATGATGTCAGTGGCTTCTGTGAGAGGAATCGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR CAA 90 bp | CACAGAAGGCTGACAAACTCGGTCTTGAAGATACTTTCTAAGAAGCTGTCCGCATTCTGCATGGCACGGTaGATGGCCTCCACCAGGAAG | + |
Preference number: 5 (lower is better) Translates to: HRRLTNSVLKILSKKLSAFCMAR*MASTRK Trigger: CTTCCTGGTGGAGGCCATCAACCGTGCCATGCAGAA...TGCGGACAGCTTCTTAGAAAGTATCTTCAAGACCGAGTTTGTCAGCCTTCTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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CDS-3UTR CAA 90 bp | AACCAAGGCTTCCACTGGCAGGGTTTGGATCCCAGGCAGGCAAGCAGGCAGGCTAGGTCACACACAATTTaGTTGTTGAAGTATTCGATG | + |
Preference number: 5 (lower is better) Translates to: NQGFHWQGLDPRQASRQARSHTI*LLKYSM Trigger: CATCGAATACTTCAACAACAAAATTGTGTGTGACCT...AGCCTGCCTGCTTGCCTGCCTGGGATCCAAACCCTGCCAGTGGAAGCCTTGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR CAA 90 bp | GATAAGATAACCAAGGCTTCCACTGGCAGGGTTTGGATCCCAGGCAGGCAAGCATCGTTGGCTTGTTTCTaGATCTTGGAGCCAGCAGTA | + |
Preference number: 5 (lower is better) Translates to: DKITKASTGRVWIPGRQASLACF*ILEPAV Trigger: TACTGCTGGCTCCAAGATCAAGAAACAAGCCAACGA...TGCTTGCCTGCCTGGGATCCAAACCCTGCCAGTGGAAGCCTTGGTTATCTTATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR CAA 90 bp | CTAACTCTGGGCAGTGCACAGCACTTTGCTCCCAGGGCAGGACATGATTTGTTATCACATACACACACTTaGGGGTCAGGATCAAGTCCC | + |
Preference number: 5 (lower is better) Translates to: LTLGSAQHFAPRAGHDLLSHTHT*GSGSSP Trigger: GGGACTTGATCCTGACCCCAAAGTGTGTGTATGTGA...TAACAAATCATGTCCTGCCCTGGGAGCAAAGTGCTGTGCACTGCCCAGAGTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087605.13 |
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CDS-3UTR CAA 90 bp | TCCAGGGGTAGGGACCTTACCTGGGAAGAGGGTGGTACCCCATTTCGATTCAAATTCTTAACAAAGACCTaGGTACTCCCCATCTGGTAC | + |
Preference number: 5 (lower is better) Translates to: SRGRDLTWEEGGTPFRFKFLTKT*VLPIWY Trigger: GTACCAGATGGGGAGTACCAAGGTCTTTGTTAAGAA...TTTGAATCGAAATGGGGTACCACCCTCTTCCCAGGTAAGGTCCCTACCCCTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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CDS-3UTR CAA 90 bp | TGTTACATACACACAAGGCAGCTGGGAGGTAGGTTTTGCAGCAACTACTATTGGGCTGCCTGTTCCACATaGAGGGTCACATCAATGGAC | + |
Preference number: 5 (lower is better) Translates to: CYIHTRQLGGRFCSNYYWAACST*RVTSMD Trigger: GTCCATTGATGTGACCCTCAATGTGGAACAGGCAGC...CCAATAGTAGTTGCTGCAAAACCTACCTCCCAGCTGCCTTGTGTGTATGTAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS GCA 90 bp | AGCTTCTCAGGAAAGAGCATCCGTAGGAAGTCCTGGTCACTGGACTaGATCAGTTCTATAAGATCAGAGAACAGCACATCTCGATTCCTC | + |
Preference number: 5 (lower is better) Translates to: SFSGKSIRRKSWSLD*ISSIRSENSTSRFL Trigger: GAGGAATCGAGATGTGCTGTTCTCTGATCTTATAGAACTGATGCAGTCCAGTGACCAGGACTTCCTACGGATGCTCTTTCCTGAGAAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR CAA 90 bp | ACAAGGCAGCTGGGAGGTAGGTTTTGCAGCAACTACTATTGGACACAGGAGAAATTTTCCAGCAGGAAGTaGGAGATCTTGCCTCCATCT | + |
Preference number: 5 (lower is better) Translates to: TRQLGGRFCSNYYWTQEKFSSRK*EILPPS Trigger: AGATGGAGGCAAGATCTCCAACTTCCTGCTGGAAAA...TTTCTCCTGTGTCCAATAGTAGTTGCTGCAAAACCTACCTCCCAGCTGCCTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS-3UTR CAA 90 bp | AGGCAGCTGGGAGGTAGGTTTTGCAGCAACTACTATTGGACACAGGAGAAAATGTTCTTAACAAAGACCTaGGTACTCCCCATCTGGTAC | + |
Preference number: 5 (lower is better) Translates to: RQLGGRFCSNYYWTQEKMFLTKT*VLPIWY Trigger: GTACCAGATGGGGAGTACCAAGGTCTTTGTTAAGAA...CATTTTCTCCTGTGTCCAATAGTAGTTGCTGCAAAACCTACCTCCCAGCTGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS GCA 72 bp | CAGGAATTTGGAGAACTGCCGACGGTAGGCGAAGCCTaGCCTTCGCACTCGGATGTTCTCCCGCAGGCCCAG | + |
Preference number: 6 (lower is better) Translates to: QEFGELPTVGEA*PSHSDVLPQAQ Trigger: CTGGGCCTGCGGGAGAACATCCGAGTGCGAAGGGCAGGCTTCGCCTACCGTCGGCAGTTCTCCAAATTCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS CCA 72 bp | ACTCGGATGTTCTCCCGCAGGCCCAGGTACTCCACCTaGTGCTTCACTCTGCTTTCCTCCCAGTCCCGGGGA | + |
Preference number: 6 (lower is better) Translates to: TRMFSRRPRYST*CFTLLSSQSRG Trigger: TCCCCGGGACTGGGAGGAAAGCAGAGTGAAGCACCAGGTGGAGTACCTGGGCCTGCGGGAGAACATCCGAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS CAA 90 bp | GCGTCCACCCCATTTGCTGTCCATCTTACGGCTGGTCAGCTTCTCTaGCAGCCGCCCACTGTCTATGCCCAGCAGGTAGGCTGGGAAAGC | + |
Preference number: 6 (lower is better) Translates to: ASTPFAVHLTAGQLL*QPPTVYAQQVGWES Trigger: GCTTTCCCAGCCTACCTGCTGGGCATAGACAGTGGGCGGCTGCAAGAGAAGCTGACCAGCCGTAAGATGGACAGCAAATGGGGTGGACGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS GCA 72 bp | CTGATGTTCCCCAGGTGCAAGATCCCTGCCACGAGCTaGAAGACAAGCTGCTGCACGCTTGTCGGAATCCCG | + |
Preference number: 6 (lower is better) Translates to: LMFPRCKIPATS*KTSCCTLVGIP Trigger: CGGGATTCCGACAAGCGTGCAGCAGCTTGTCTTGCAGCTCGTGGCAGGGATCTTGCACCTGGGGAACATCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS GCA 72 bp | TGTAGCAGTGTCTGGTCCGCGCCGCCACCGGTAGCATaGATCGTGGCACACACATCATCTAGCACGCTCATG | + |
Preference number: 6 (lower is better) Translates to: CSSVWSAPPPVA*IVAHTSSSTLM Trigger: CATGAGCGTGCTAGATGATGTGTGTGCCACGATGCATGCTACCGGTGGCGGCGCGGACCAGACACTGCTACA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS GCA 72 bp | TACTGGTCTGGCTCCATGTTGACAGCACGAAGCAGGTaGTGGACACCCTGGCGTTCATCTCCACGCCACCGT | + |
Preference number: 6 (lower is better) Translates to: YWSGSMLTARSR*WTPWRSSPRHR Trigger: ACGGTGGCGTGGAGATGAACGCCAGGGTGTCCAGCACCTGCTTCGTGCTGTCAACATGGAGCCAGACCAGTA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS TCA 72 bp | CCAGTGCGTCACGAGTGTAGGCTGCCTGTTCCACATTaGGGGTCACATCAATGGACTCACTGCGTCCACCCC | + |
Preference number: 6 (lower is better) Translates to: PVRHECRLPVPH*GSHQWTHCVHP Trigger: GGGGTGGACGCAGTGAGTCCATTGATGTGACCCTCAATGTGGAACAGGCAGCCTACACTCGTGACGCACTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS GCA 72 bp | TGCAAGATCCCTGCCACGAGCTGCAAGACAAGCTGCTaGACGCTTGTCGGAATCCCGATGACTTGCATGGCG | + |
Preference number: 6 (lower is better) Translates to: CKIPATSCKTSC*TLVGIPMTCMA Trigger: CGCCATGCAAGTCATCGGGATTCCGACAAGCGTGCAGCAGCTTGTCTTGCAGCTCGTGGCAGGGATCTTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS GCA 72 bp | GGCTGGTCAGCTTCTCTTGCAGCCGCCCACTGTCTATaGCCAGCAGGTAGGCTGGGAAAGCTAAGAGGTCTA | + |
Preference number: 6 (lower is better) Translates to: GWSASLAAAHCL*PAGRLGKLRGL Trigger: TAGACCTCTTAGCTTTCCCAGCCTACCTGCTGGGCATAGACAGTGGGCGGCTGCAAGAGAAGCTGACCAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS CCA 72 bp | CACTGCGTCCACCCCATTTGCTGTCCATCTTACGGCTaGTCAGCTTCTCTTGCAGCCGCCCACTGTCTATGC | + |
Preference number: 6 (lower is better) Translates to: HCVHPICCPSYG*SASLAAAHCLC Trigger: GCATAGACAGTGGGCGGCTGCAAGAGAAGCTGACCAGCCGTAAGATGGACAGCAAATGGGGTGGACGCAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS CAA 90 bp | GTAGTGGGGTGTGCACTTCTTCAGCGTGGACACCAGGTCGTTGGCTaGTTTCTTGATCTTGGAGCCAGCAGTACTGGGGCGGCCCTTCTT | + |
Preference number: 6 (lower is better) Translates to: VVGCALLQRGHQVVG*FLDLGASSTGAALL Trigger: AAGAAGGGCCGCCCCAGTACTGCTGGCTCCAAGATCAAGAAACAAGCCAACGACCTGGTGTCCACGCTGAAGAAGTGCACACCCCACTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS TCA 72 bp | TGCTGTATTCTTCCTGAGGCTTCTGCATGGCACGGTTaGTGGCCTCCACCAGGAAGTCGAAGAGGCGGGCAT | + |
Preference number: 6 (lower is better) Translates to: CCILPEASAWHG*WPPPGSRRGGH Trigger: ATGCCCGCCTCTTCGACTTCCTGGTGGAGGCCATCAACCGTGCCATGCAGAAGCCTCAGGAAGAATACAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS TCA 72 bp | TCTTCAGCGTGGACACCAGGTCGTTGGCTTGTTTCTTaGTCTTGGAGCCAGCAGTACTGGGGCGGCCCTTCT | + |
Preference number: 6 (lower is better) Translates to: SSAWTPGRWLVS*SWSQQYWGGPS Trigger: AGAAGGGCCGCCCCAGTACTGCTGGCTCCAAGATCAAGAAACAAGCCAACGACCTGGTGTCCACGCTGAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS GCA 72 bp | AGGTGCAAGATCCCTGCCACGAGCTGCAAGACAAGCTaGTGCACGCTTGTCGGAATCCCGATGACTTGCATG | + |
Preference number: 6 (lower is better) Translates to: RCKIPATSCKTS*CTLVGIPMTCM Trigger: CATGCAAGTCATCGGGATTCCGACAAGCGTGCAGCAGCTTGTCTTGCAGCTCGTGGCAGGGATCTTGCACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS CCA 72 bp | TCTCAGGGGTCAGGATGGCATACCTTTGCAGGAATTTaGAGAACTGCCGACGGTAGGCGAAGCCTGCCCTTC | + |
Preference number: 6 (lower is better) Translates to: SQGSGWHTFAGI*RTADGRRSLPF Trigger: GAAGGGCAGGCTTCGCCTACCGTCGGCAGTTCTCCAAATTCCTGCAAAGGTATGCCATCCTGACCCCTGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS CAA 72 bp | AGCGTGGACACCAGGTCGTTGGCTTGTTTCTTGATCTaGGAGCCAGCAGTACTGGGGCGGCCCTTCTTGTCT | + |
Preference number: 6 (lower is better) Translates to: SVDTRSLACFLI*EPAVLGRPFLS Trigger: AGACAAGAAGGGCCGCCCCAGTACTGCTGGCTCCAAGATCAAGAAACAAGCCAACGACCTGGTGTCCACGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS CAA 90 bp | GTCCCGTTTGATAGGCCAGGTCTCACCTTGAAGCGGCGGTCATACTaGGTGACTGAGTCGGCAAAGTCCACTCGTTCCCTTTTAGCCAGG | + |
Preference number: 6 (lower is better) Translates to: VPFDRPGLTLKRRSY*VTESAKSTRSLLAR Trigger: CCTGGCTAAAAGGGAACGAGTGGACTTTGCCGACTCAGTCACCAAGTATGACCGCCGCTTCAAGGTGAGACCTGGCCTATCAAACGGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173372.8 |
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CDS TCA 72 bp | TCTCCACGCGGGCATAATTCCCTTCTTCACAGAAGCTaGTGTTCCCCAGGTGCAAGATCCCTGCCACGAGCT | + |
Preference number: 6 (lower is better) Translates to: SPRGHNSLLHRS*CSPGARSLPRA Trigger: AGCTCGTGGCAGGGATCTTGCACCTGGGGAACATCAGCTTCTGTGAAGAAGGGAATTATGCCCGCGTGGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS CCA 72 bp | TACTTTCGGACTGCTACATGGCGCCGCCAGGCTTTCTaGATAGTGCGAGCGAAGCCGTCAAACTTCCTCTCT | + |
Preference number: 6 (lower is better) Translates to: YFRTATWRRQAF*IVRAKPSNFLS Trigger: AGAGAGGAAGTTTGACGGCTTCGCTCGCACTATCCAGAAAGCCTGGCGGCGCCATGTAGCAGTCCGAAAGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS CCA 72 bp | TCTTCCCGCATCTCTTCATACTTTCGGACTGCTACATaGCGCCGCCAGGCTTTCTGGATAGTGCGAGCGAAG | + |
Preference number: 6 (lower is better) Translates to: SSRISSYFRTAT*RRQAFWIVRAK Trigger: CTTCGCTCGCACTATCCAGAAAGCCTGGCGGCGCCATGTAGCAGTCCGAAAGTATGAAGAGATGCGGGAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS CAA 72 bp | TGTGCACTTCTTCAGCGTGGACACCAGGTCGTTGGCTaGTTTCTTGATCTTGGAGCCAGCAGTACTGGGGCG | + |
Preference number: 6 (lower is better) Translates to: CALLQRGHQVVG*FLDLGASSTGA Trigger: CGCCCCAGTACTGCTGGCTCCAAGATCAAGAAACAAGCCAACGACCTGGTGTCCACGCTGAAGAAGTGCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS GCA 72 bp | GGGTCACATCAATGGACTCACTGCGTCCACCCCATTTaGTGTCCATCTTACGGCTGGTCAGCTTCTCTTGCA | + |
Preference number: 6 (lower is better) Translates to: GSHQWTHCVHPI*CPSYGWSASLA Trigger: TGCAAGAGAAGCTGACCAGCCGTAAGATGGACAGCAAATGGGGTGGACGCAGTGAGTCCATTGATGTGACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS GCA 72 bp | CTCACAGAAGCCACTGACATCATAGGAGACCTTGCCTaGATAGTGATGGATGACGAAACCCGCGCTCCAGCT | + |
Preference number: 6 (lower is better) Translates to: LTEATDIIGDLA*IVMDDETRAPA Trigger: AGCTGGAGCGCGGGTTTCGTCATCCATCACTATGCAGGCAAGGTCTCCTATGATGTCAGTGGCTTCTGTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS GCA 72 bp | AGAAGCTTCTTCCCGCATCTCTTCATACTTTCGGACTaGTACATGGCGCCGCCAGGCTTTCTGGATAGTGCG | + |
Preference number: 6 (lower is better) Translates to: RSFFPHLFILSD*YMAPPGFLDSA Trigger: CGCACTATCCAGAAAGCCTGGCGGCGCCATGTAGCAGTCCGAAAGTATGAAGAGATGCGGGAAGAAGCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS CAA 72 bp | GCCTCAAGCAGTGGGTTTGACTGTAGGATTATGTCTTaGACGTGCTGGACCTTGTCTCCCCCACCAGACACC | + |
Preference number: 6 (lower is better) Translates to: ASSSGFDCRIMS*TCWTLSPPPDT Trigger: GGTGTCTGGTGGGGGAGACAAGGTCCAGCACGTCAAAGACATAATCCTACAGTCAAACCCACTGCTTGAGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS CAA 72 bp | TGGGGTGTGCACTTCTTCAGCGTGGACACCAGGTCGTaGGCTTGTTTCTTGATCTTGGAGCCAGCAGTACTG | + |
Preference number: 6 (lower is better) Translates to: WGVHFFSVDTRS*ACFLILEPAVL Trigger: CAGTACTGCTGGCTCCAAGATCAAGAAACAAGCCAACGACCTGGTGTCCACGCTGAAGAAGTGCACACCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS TCA 72 bp | CCTCAAGCAGTGGGTTTGACTGTAGGATTATGTCTTTaGCGTGCTGGACCTTGTCTCCCCCACCAGACACCT | + |
Preference number: 6 (lower is better) Translates to: PQAVGLTVGLCL*RAGPCLPHQTP Trigger: AGGTGTCTGGTGGGGGAGACAAGGTCCAGCACGTCAAAGACATAATCCTACAGTCAAACCCACTGCTTGAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS GCA 72 bp | AGCAGTGGGTTTGACTGTAGGATTATGTCTTTGACGTaGTGGACCTTGTCTCCCCCACCAGACACCTTGGAG | + |
Preference number: 6 (lower is better) Translates to: SSGFDCRIMSLT*WTLSPPPDTLE Trigger: CTCCAAGGTGTCTGGTGGGGGAGACAAGGTCCAGCACGTCAAAGACATAATCCTACAGTCAAACCCACTGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS GCA 72 bp | GGAAGATCTCAAAGCCGTAGATGTCAAGCACGCCGATaGTGTATTCTTCCTGAGGCTTCTGCATGGCACGGT | + |
Preference number: 6 (lower is better) Translates to: GRSQSRRCQARR*CILPEASAWHG Trigger: ACCGTGCCATGCAGAAGCCTCAGGAAGAATACAGCATCGGCGTGCTTGACATCTACGGCTTTGAGATCTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS CAA 72 bp | TTCTGCATGACCACACGAGACTTTTCCAGCAGGAAGTaGGAGATCTTGCCTCCATCTGGCTCTCCACCTCGA | + |
Preference number: 6 (lower is better) Translates to: FCMTTRDFSSRK*EILPPSGSPPR Trigger: TCGAGGTGGAGAGCCAGATGGAGGCAAGATCTCCAACTTCCTGCTGGAAAAGTCTCGTGTGGTCATGCAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS CAA 72 bp | AAGTCCCGTTTGATAGGCTTGAAGCGGCGGTCATACTaGGTGACTGAGTCGGCAAAGTCCACTCGTTCCCTT | + |
Preference number: 6 (lower is better) Translates to: KSRLIGLKRRSY*VTESAKSTRSL Trigger: AAGGGAACGAGTGGACTTTGCCGACTCAGTCACCAAGTATGACCGCCGCTTCAAGCCTATCAAACGGGACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087605.13 |
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CDS CAA 90 bp | TTGCCGAAAGCCTCAAGCAGTGGGTTTGACTGTAGGATTATGTCTTaGACGTGCTGGACCTTGTCTCCCCCACCAGACACCTTGGAGATG | + |
Preference number: 6 (lower is better) Translates to: LPKASSSGFDCRIMS*TCWTLSPPPDTLEM Trigger: CATCTCCAAGGTGTCTGGTGGGGGAGACAAGGTCCAGCACGTCAAAGACATAATCCTACAGTCAAACCCACTGCTTGAGGCTTTCGGCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS TCA 72 bp | TTTGATAGGCTTGAAGCGGCGGTCATACTTGGTGACTaGGTCGGCAAAGTCCACTCGTTCCCTTTTAGCCAG | + |
Preference number: 6 (lower is better) Translates to: FDRLEAAVILGD*VGKVHSFPFSQ Trigger: CTGGCTAAAAGGGAACGAGTGGACTTTGCCGACTCAGTCACCAAGTATGACCGCCGCTTCAAGCCTATCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087605.13 |
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CDS TCA 72 bp | CACAGTCGATCAGCATATTCCGGTACATGTTGTCGGTaGGGGCATAGATGTGCGGGGGATTCTCATATTGAG | + |
Preference number: 6 (lower is better) Translates to: HSRSAYSGTCCR*GHRCAGDSHIE Trigger: CTCAATATGAGAATCCCCCGCACATCTATGCCCTCACCGACAACATGTACCGGAATATGCTGATCGACTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 ENSMUST00000174695.2 |
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CDS CCA 72 bp | TCAGGATTCTTAACAAAGACCTTGGTACTCCCCATCTaGTACTGGTCTGGCTCCATGTTGACAGCACGAAGC | + |
Preference number: 6 (lower is better) Translates to: SGFLTKTLVLPI*YWSGSMLTARS Trigger: GCTTCGTGCTGTCAACATGGAGCCAGACCAGTACCAGATGGGGAGTACCAAGGTCTTTGTTAAGAATCCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS TCA 72 bp | ACTTCGGTCATCAGTGCCTTCCACCTTGTAGGTGTCTaGTTGGTTGAGGTAGTAGTAGTAGTCTGGCGTCAT | + |
Preference number: 6 (lower is better) Translates to: TSVISAFHLVGV*LVEVVVVVWRH Trigger: ATGACGCCAGACTACTACTACTACCTCAACCAATCAGACACCTACAAGGTGGAAGGCACTGATGACCGAAGT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS TCA 72 bp | AGAACAGCACATCTCGATTCCTCTCACAGAAGCCACTaGCATCATAGGAGACCTTGCCTGCATAGTGATGGA | + |
Preference number: 6 (lower is better) Translates to: RTAHLDSSHRSH*HHRRPCLHSDG Trigger: TCCATCACTATGCAGGCAAGGTCTCCTATGATGTCAGTGGCTTCTGTGAGAGGAATCGAGATGTGCTGTTCT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS CAA 90 bp | TCCCCAACGAAGTTACGGTTGATGCTGTTTCGCCTTCGTTCCTTCTaGTTCAGTAGGATGTTAGAAGCTTCTTCCCGCATCTCTTCATAC | + |
Preference number: 6 (lower is better) Translates to: SPTKLRLMLFRLRSF*FSRMLEASSRISSY Trigger: GTATGAAGAGATGCGGGAAGAAGCTTCTAACATCCTACTGAACAAGAAGGAACGAAGGCGAAACAGCATCAACCGTAACTTCGTTGGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |
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CDS TCA 72 bp | GGGGATTCTCATATTGAGCAAAAATGTAGTCATCCATaGAGCGTTTGCGGAGGTTGCTCACAATGGCGTCCT | + |
Preference number: 6 (lower is better) Translates to: GDSHIEQKCSHP*SVCGGCSQWRP Trigger: AGGACGCCATTGTGAGCAACCTCCGCAAACGCTTCATGGATGACTACATTTTTGCTCAATATGAGAATCCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174695.2 |
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CDS CAA 72 bp | AAGTTACGGTTGATGCTGTTTCGCCTTCGTTCCTTCTaGTTCAGTAGGATGTTAGAAGCTTCTTCCCGCATC | + |
Preference number: 6 (lower is better) Translates to: KLRLMLFRLRSF*FSRMLEASSRI Trigger: GATGCGGGAAGAAGCTTCTAACATCCTACTGAACAAGAAGGAACGAAGGCGAAACAGCATCAACCGTAACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087605.13 ENSMUST00000173372.8 |