RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MYO1E (Mus musculus)

Ensembl gene IDs: ENSMUSG00000032220

Ensembl transcript IDs: ENSMUST00000034745.9, ENSMUST00000214042.2

Found 273 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCATGGGCTCGGAAGGATGGCCTGCCCGCCCTTGGCAGTGACAGGTaGGTGCCTGTTCGCCCCAAGTCCAGCCTCCAGAGGGTGGGTCCT +
Preference number: 1 (lower is better)
Translates to: PWARKDGLPALGSDR*VPVRPKSSLQRVGP
Trigger: AGGACCCACCCTCTGGAGGCTGGACTTGGGGCGAACAGGCACTCACCTGTCACTGCCAAGGGCGGGCAGGCCATCCTTCCGAGCCCATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034745.9
ENSMUST00000214042.2
3UTR GCA 90 bp GCTTGGGTTGAGGCTTTGGTCTGCCCCCTGCTGGGGGAGGCCGGCTaGTCGTTTGTCTTCGGACTCCAGCAACACCCTGGTCCGGGACCT +
Preference number: 1 (lower is better)
Translates to: AWVEALVCPLLGEAG*SFVFGLQQHPGPGP
Trigger: AGGTCCCGGACCAGGGTGTTGCTGGAGTCCGAAGACAAACGAGCAGCCGGCCTCCCCCAGCAGGGGGCAGACCAAAGCCTCAACCCAAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR GCA 90 bp TGGCACCTGAGGCTTAGGCTTGGGTTGAGGCTTTGGTCTGCCCCCTaGTGGGGGAGGCCGGCTGCTCGTTTGTCTTCGGACTCCAGCAAC +
Preference number: 1 (lower is better)
Translates to: WHLRLRLGLRLWSAP*WGRPAARLSSDSSN
Trigger: GTTGCTGGAGTCCGAAGACAAACGAGCAGCCGGCCTCCCCCAGCAGGGGGCAGACCAAAGCCTCAACCCAAGCCTAAGCCTCAGGTGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR CCA 90 bp CACCTGAGGCTTAGGCTTGGGTTGAGGCTTTGGTCTGCCCCCTGCTaGGGGAGGCCGGCTGCTCGTTTGTCTTCGGACTCCAGCAACACC +
Preference number: 1 (lower is better)
Translates to: HLRLRLGLRLWSAPC*GRPAARLSSDSSNT
Trigger: GGTGTTGCTGGAGTCCGAAGACAAACGAGCAGCCGGCCTCCCCCAGCAGGGGGCAGACCAAAGCCTCAACCCAAGCCTAAGCCTCAGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR CCA 90 bp ACTTTGTTGCTGGGCTTGAGGATAGCCAGGTCACCGAAGCCTTGGTaGAACTGCACTTGCCGGGAGCCCCCTGCACTCCAGGGACCCCAG +
Preference number: 1 (lower is better)
Translates to: TLLLGLRIARSPKPW*NCTCREPPALQGPQ
Trigger: CTGGGGTCCCTGGAGTGCAGGGGGCTCCCGGCAAGTGCAGTTCCACCAAGGCTTCGGTGACCTGGCTATCCTCAAGCCCAGCAACAAAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR CCA 90 bp AGCACTTTGTTGCTGGGCTTGAGGATAGCCAGGTCACCGAAGCCTTaGTGGAACTGCACTTGCCGGGAGCCCCCTGCACTCCAGGGACCC +
Preference number: 1 (lower is better)
Translates to: STLLLGLRIARSPKP*WNCTCREPPALQGP
Trigger: GGGTCCCTGGAGTGCAGGGGGCTCCCGGCAAGTGCAGTTCCACCAAGGCTTCGGTGACCTGGCTATCCTCAAGCCCAGCAACAAAGTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR GCA 90 bp CTGGTAGGACGGGAGTTCTTGGGCAGCCCGGGTCCGATGCTGACCTaGAGCACTTTGTTGCTGGGCTTGAGGATAGCCAGGTCACCGAAG +
Preference number: 1 (lower is better)
Translates to: LVGREFLGSPGPMLT*STLLLGLRIARSPK
Trigger: CTTCGGTGACCTGGCTATCCTCAAGCCCAGCAACAAAGTGCTGCAGGTCAGCATCGGACCCGGGCTGCCCAAGAACTCCCGTCCTACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR TCA 90 bp ACACCCTGGTCCGGGACCTTGAGGAAATCCAGGCTCTCTGGCGTCTaGGACAATCGATCCGAGCCGGTGGACTGTTGCCTTGGCAAGGGT +
Preference number: 1 (lower is better)
Translates to: TPWSGTLRKSRLSGV*DNRSEPVDCCLGKG
Trigger: ACCCTTGCCAAGGCAACAGTCCACCGGCTCGGATCGATTGTCTCAGACGCCAGAGAGCCTGGATTTCCTCAAGGTCCCGGACCAGGGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR CCA 90 bp TCCAGCAACACCCTGGTCCGGGACCTTGAGGAAATCCAGGCTCTCTaGCGTCTGAGACAATCGATCCGAGCCGGTGGACTGTTGCCTTGG +
Preference number: 1 (lower is better)
Translates to: SSNTLVRDLEEIQAL*RLRQSIRAGGLLPW
Trigger: CCAAGGCAACAGTCCACCGGCTCGGATCGATTGTCTCAGACGCCAGAGAGCCTGGATTTCCTCAAGGTCCCGGACCAGGGTGTTGCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR TCA 90 bp TGCTCGTTTGTCTTCGGACTCCAGCAACACCCTGGTCCGGGACCTTaGGGAAATCCAGGCTCTCTGGCGTCTGAGACAATCGATCCGAGC +
Preference number: 1 (lower is better)
Translates to: CSFVFGLQQHPGPGP*GNPGSLASETIDPS
Trigger: GCTCGGATCGATTGTCTCAGACGCCAGAGAGCCTGGATTTCCTCAAGGTCCCGGACCAGGGTGTTGCTGGAGTCCGAAGACAAACGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR CCA 90 bp CTCTGGCGTCTGAGACAATCGATCCGAGCCGGTGGACTGTTGCCTTaGCAAGGGTGGGCGGGCCATAGAGGTGTACAGGCTTTTCTGATT +
Preference number: 1 (lower is better)
Translates to: LWRLRQSIRAGGLLP*QGWAGHRGVQAFLI
Trigger: AATCAGAAAAGCCTGTACACCTCTATGGCCCGCCCACCCTTGCCAAGGCAACAGTCCACCGGCTCGGATCGATTGTCTCAGACGCCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR CCA 90 bp TTCGTCCGTGTCCTGAGCATCATAGGCATACAAGGCCTTGCACTGTaGCACCTGAGGCTTAGGCTTGGGTTGAGGCTTTGGTCTGCCCCC +
Preference number: 1 (lower is better)
Translates to: FVRVLSIIGIQGLAL*HLRLRLGLRLWSAP
Trigger: GGGGGCAGACCAAAGCCTCAACCCAAGCCTAAGCCTCAGGTGCCACAGTGCAAGGCCTTGTATGCCTATGATGCTCAGGACACGGACGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR GCA 90 bp AGGAGAATTTCCTACAGGGAGAGGGTAAGGGGGTCTGAGGGACTGTaGGGGAATGCAGTGACTGTTTCTCTAGGCAAAGAGGAGAGGGCG +
Preference number: 1 (lower is better)
Translates to: RRISYRERVRGSEGL*GNAVTVSLGKEERA
Trigger: CGCCCTCTCCTCTTTGCCTAGAGAAACAGTCACTGCATTCCCGCACAGTCCCTCAGACCCCCTTACCCTCTCCCTGTAGGAAATTCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034745.9
ENSMUST00000214042.2
3UTR CCA 90 bp GGGAGCAGGGGCAGCTCTCATCGGGTAATTGTTCTTAGTTCCACCTaGATACCCTCTGCTGGTGACGGTGTTTCTTCTGGTAGGACGGGA +
Preference number: 1 (lower is better)
Translates to: GSRGSSHRVIVLSST*IPSAGDGVSSGRTG
Trigger: TCCCGTCCTACCAGAAGAAACACCGTCACCAGCAGAGGGTATCCAGGTGGAACTAAGAACAATTACCCGATGAGAGCTGCCCCTGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR GCA 90 bp CTCCATGGCTTTATTGATAGAATCTACCAAGAAATCAAAGACTCGTaGGTGCAGGGCCTTGGCGAGCGCGTCCCTGGTGTAGCAGGCCTG +
Preference number: 1 (lower is better)
Translates to: LHGFIDRIYQEIKDS*VQGLGERVPGVAGL
Trigger: CAGGCCTGCTACACCAGGGACGCGCTCGCCAAGGCCCTGCACGCACGAGTCTTTGATTTCTTGGTAGATTCTATCAATAAAGCCATGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR CCA 90 bp CCAAGCTGGAACTGGTCGCTGTCCATGTTGACAGACTGCAGTAGATaGAGGACACCTTGTTTCTCATCTCCTCTCCACACAGGCCAGGTA +
Preference number: 1 (lower is better)
Translates to: PSWNWSLSMLTDCSR*RTPCFSSPLHTGQV
Trigger: TACCTGGCCTGTGTGGAGAGGAGATGAGAAACAAGGTGTCCTCCATCTACTGCAGTCTGTCAACATGGACAGCGACCAGTTCCAGCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR TCA 90 bp CACGCCGATAAGCATAACCAGCTCTTCTCACTCGGATGTTTTCTTTaGGACCCAGGTACTCCACTTGATGCTTCACTCTGCTCTCCTCCC +
Preference number: 1 (lower is better)
Translates to: HADKHNQLFSLGCFL*DPGTPLDASLCSPP
Trigger: GGGAGGAGAGCAGAGTGAAGCATCAAGTGGAGTACCTGGGTCTCAAAGAAAACATCCGAGTGAGAAGAGCTGGTTATGCTTATCGGCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR GCA 90 bp ATCCTCCGCTTCAGGACTTCCTTCACAACACCTTTGTCTGGGCCTTaGTTCACCTTCTCCCTTCCAATTAAGTACAAGCACTTGGGGGTT +
Preference number: 1 (lower is better)
Translates to: ILRFRTSFTTPLSGP*FTFSLPIKYKHLGV
Trigger: AACCCCCAAGTGCTTGTACTTAATTGGAAGGGAGAAGGTGAAGCAAGGCCCAGACAAAGGTGTTGTGAAGGAAGTCCTGAAGCGGAGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR CCA 90 bp GTCACATGGATGGACTCTGACTTTCCTCCCCACTTACTGTCCATCTaGCGGCTCGTTAGCTTCTCTTTTAACCGGTCTTGGTTTATACCC +
Preference number: 1 (lower is better)
Translates to: VTWMDSDFPPHLLSI*RLVSFSFNRSWFIP
Trigger: GGGTATAAACCAAGACCGGTTAAAAGAGAAGCTAACGAGCCGCCAGATGGACAGTAAGTGGGGAGGAAAGTCAGAGTCCATCCATGTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR CCA 90 bp GCAACACGAGAGTCTGCTCTTCCGAGAAGATTCCAATCACATTCATaGCGTGCAGGGTTTCCTGGAAATCCCGCTTGTCATCAATGTCAT +
Preference number: 1 (lower is better)
Translates to: ATRESALPRRFQSHS*RAGFPGNPACHQCH
Trigger: ATGACATTGATGACAAGCGGGATTTCCAGGAAACCCTGCACGCCATGAATGTGATTGGAATCTTCTCGGAAGAGCAGACTCTCGTGTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR CCA 90 bp TCCGTTTTAAAGACGGACTCCAGCAAACTGTCATATTCTTGCTCGTaGAGAATGAAGATGTCATCCTGCATGGTACTGAGGGACACGGAC +
Preference number: 1 (lower is better)
Translates to: SVLKTDSSKLSYSCS*RMKMSSCMVLRDTD
Trigger: GTCCGTGTCCCTCAGTACCATGCAGGATGACATCTTCATTCTCCACGAGCAAGAATATGACAGTTTGCTGGAGTCCGTCTTTAAAACGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR GCA 90 bp TCAACAGCAGGTCTGAGGCTTCTTCTCTCATTTGAACATATTTCTTaGGGGCCACGAACTTCCTCCATGTTTTCTGTATCACACGTGCGT +
Preference number: 1 (lower is better)
Translates to: STAGLRLLLSFEHIS*GPRTSSMFSVSHVR
Trigger: ACGCACGTGTGATACAGAAAACATGGAGGAAGTTCGTGGCCCGCAAGAAATATGTTCAAATGAGAGAAGAAGCCTCAGACCTGCTGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR GCA 90 bp AGGAACTCCGTTTTAAAGACGGACTCCAGCAAACTGTCATATTCTTaGTCGTGGAGAATGAAGATGTCATCCTGCATGGTACTGAGGGAC +
Preference number: 1 (lower is better)
Translates to: RNSVLKTDSSKLSYS*SWRMKMSSCMVLRD
Trigger: GTCCCTCAGTACCATGCAGGATGACATCTTCATTCTCCACGAGCAAGAATATGACAGTTTGCTGGAGTCCGTCTTTAAAACGGAGTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR GCA 90 bp TCTTTGAAGCTGATGTTTCCCAAGTGGAGAATTCCAGCCACAATCTaGAACACGAGAGTCTGCTCTTCCGAGAAGATTCCAATCACATTC +
Preference number: 1 (lower is better)
Translates to: SLKLMFPKWRIPATI*NTRVCSSEKIPITF
Trigger: GAATGTGATTGGAATCTTCTCGGAAGAGCAGACTCTCGTGTTGCAGATTGTGGCTGGAATTCTCCACTTGGGAAACATCAGCTTCAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR CAA 90 bp AGTGGTCCCGGCTCCCATGGGCTCGGAAGGATGGCCTGCCCGCCCTaGGCAGTGACAGGTGAGTGCCTGTTCGCCCCAAGTCCAGCCTCC +
Preference number: 2 (lower is better)
Translates to: SGPGSHGLGRMACPP*AVTGECLFAPSPAS
Trigger: GGAGGCTGGACTTGGGGCGAACAGGCACTCACCTGTCACTGCCAAGGGCGGGCAGGCCATCCTTCCGAGCCCATGGGAGCCGGGACCACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034745.9
ENSMUST00000214042.2
3UTR-3UTR CCA 90 bp ACCAGCAGTCTTAGTGGTCCCGGCTCCCATGGGCTCGGAAGGATGGCCTGCCCGTGGCGAGCGCGTCCCTaGTGTAGCAGGCCTGCTCCA +
Preference number: 2 (lower is better)
Translates to: TSSLSGPGSHGLGRMACPWRARP*CSRPAP
Trigger: TGGAGCAGGCCTGCTACACCAGGGACGCGCTCGCCA...CGGGCAGGCCATCCTTCCGAGCCCATGGGAGCCGGGACCACTAAGACTGCTGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR-3UTR GCA 90 bp ACCAGCAGTCTTAGTGGTCCCGGCTCCCATGGGCTCGGAAGGATGGCCTGCCCGTGGTGGAACTGCACTTaGCGGGAGCCCCCTGCACTC +
Preference number: 2 (lower is better)
Translates to: TSSLSGPGSHGLGRMACPWWNCT*REPPAL
Trigger: GAGTGCAGGGGGCTCCCGGCAAGTGCAGTTCCACCA...CGGGCAGGCCATCCTTCCGAGCCCATGGGAGCCGGGACCACTAAGACTGCTGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR-3UTR TCA 90 bp TCTACCAAGAAATCAAAGACTCGTGCGTGCAGGGCCTTGGCGAGCGCGTCCCTGGTCCCCTGGACCTGGTaGGTGGGCAGGAGGCTGTGG +
Preference number: 2 (lower is better)
Translates to: STKKSKTRACRALASASLVPWTW*VGRRLW
Trigger: CCACAGCCTCCTGCCCACTCACCAGGTCCAGGGGAC...CAGGGACGCGCTCGCCAAGGCCCTGCACGCACGAGTCTTTGATTTCTTGGTAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR-3UTR GCA 90 bp ACCAGCAGTCTTAGTGGTCCCGGCTCCCATGGGCTCGGAAGGATGGCCTGCCCGGCAGTGACAGGTGAGTaGCTGTTCGCCCCAAGTCCA +
Preference number: 2 (lower is better)
Translates to: TSSLSGPGSHGLGRMACPAVTGE*LFAPSP
Trigger: TGGACTTGGGGCGAACAGGCACTCACCTGTCACTGC...CGGGCAGGCCATCCTTCCGAGCCCATGGGAGCCGGGACCACTAAGACTGCTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034745.9
ENSMUST00000214042.2
3UTR-3UTR CCA 90 bp ACCAGCAGTCTTAGTGGTCCCGGCTCCCATGGGCTCGGAAGGATGGCCTGCCCGAGGTCACCGAAGCCTTaGTGGAACTGCACTTGCCGG +
Preference number: 2 (lower is better)
Translates to: TSSLSGPGSHGLGRMACPRSPKP*WNCTCR
Trigger: CCGGCAAGTGCAGTTCCACCAAGGCTTCGGTGACCT...CGGGCAGGCCATCCTTCCGAGCCCATGGGAGCCGGGACCACTAAGACTGCTGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR CAA 90 bp CAGCACTTTGTTGCTGGGCTTGAGGATAGCCAGGTCACCGAAGCCTaGGTGGAACTGCACTTGCCGGGAGCCCCCTGCACTCCAGGGACC +
Preference number: 2 (lower is better)
Translates to: QHFVAGLEDSQVTEA*VELHLPGAPCTPGT
Trigger: GGTCCCTGGAGTGCAGGGGGCTCCCGGCAAGTGCAGTTCCACCAAGGCTTCGGTGACCTGGCTATCCTCAAGCCCAGCAACAAAGTGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR CAA 90 bp CGGGAGTTCTTGGGCAGCCCGGGTCCGATGCTGACCTGCAGCACTTaGTTGCTGGGCTTGAGGATAGCCAGGTCACCGAAGCCTTGGTGG +
Preference number: 2 (lower is better)
Translates to: REFLGSPGPMLTCST*LLGLRIARSPKPWW
Trigger: CCACCAAGGCTTCGGTGACCTGGCTATCCTCAAGCCCAGCAACAAAGTGCTGCAGGTCAGCATCGGACCCGGGCTGCCCAAGAACTCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR-3UTR CCA 90 bp CACAGGAGAATTTCCTACAGGGAGAGGGTAAGGGGGTCTGAGGGACTGTGCGGGTGGTCCCGGCTCCCATaGGCTCGGAAGGATGGCCTG +
Preference number: 2 (lower is better)
Translates to: HRRISYRERVRGSEGLCGWSRLP*ARKDGL
Trigger: CAGGCCATCCTTCCGAGCCCATGGGAGCCGGGACCA...CCCGCACAGTCCCTCAGACCCCCTTACCCTCTCCCTGTAGGAAATTCTCCTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034745.9
ENSMUST00000214042.2
3UTR CAA 90 bp GGCAGCCCGGGTCCGATGCTGACCTGCAGCACTTTGTTGCTGGGCTaGAGGATAGCCAGGTCACCGAAGCCTTGGTGGAACTGCACTTGC +
Preference number: 2 (lower is better)
Translates to: GSPGPMLTCSTLLLG*RIARSPKPWWNCTC
Trigger: GCAAGTGCAGTTCCACCAAGGCTTCGGTGACCTGGCTATCCTCAAGCCCAGCAACAAAGTGCTGCAGGTCAGCATCGGACCCGGGCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR-3UTR GCA 90 bp CTTCTTCCCACCAGCAGTCTTAGTGGTCCCGGCTCCCATGGGCTCGGAAGGATGAAGCCTTGGTGGAACTaGACTTGCCGGGAGCCCCCT +
Preference number: 2 (lower is better)
Translates to: LLPTSSLSGPGSHGLGRMKPWWN*TCREPP
Trigger: AGGGGGCTCCCGGCAAGTGCAGTTCCACCAAGGCTT...CATCCTTCCGAGCCCATGGGAGCCGGGACCACTAAGACTGCTGGTGGGAAGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR CAA 90 bp GAGTTCTTGGGCAGCCCGGGTCCGATGCTGACCTGCAGCACTTTGTaGCTGGGCTTGAGGATAGCCAGGTCACCGAAGCCTTGGTGGAAC +
Preference number: 2 (lower is better)
Translates to: EFLGSPGPMLTCSTL*LGLRIARSPKPWWN
Trigger: GTTCCACCAAGGCTTCGGTGACCTGGCTATCCTCAAGCCCAGCAACAAAGTGCTGCAGGTCAGCATCGGACCCGGGCTGCCCAAGAACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR CAA 90 bp CAGGCTCTCTGGCGTCTGAGACAATCGATCCGAGCCGGTGGACTGTaGCCTTGGCAAGGGTGGGCGGGCCATAGAGGTGTACAGGCTTTT +
Preference number: 2 (lower is better)
Translates to: QALWRLRQSIRAGGL*PWQGWAGHRGVQAF
Trigger: AAAAGCCTGTACACCTCTATGGCCCGCCCACCCTTGCCAAGGCAACAGTCCACCGGCTCGGATCGATTGTCTCAGACGCCAGAGAGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR-3UTR CCA 90 bp ACCAGCAGTCTTAGTGGTCCCGGCTCCCATGGGCTCGGAAGGATGGCCTGCCCGTTACTTCTCCCAAGCTaGAACTGGTCGCTGTCCATG +
Preference number: 2 (lower is better)
Translates to: TSSLSGPGSHGLGRMACPLLLPS*NWSLSM
Trigger: CATGGACAGCGACCAGTTCCAGCTTGGGAGAAGTAA...CGGGCAGGCCATCCTTCCGAGCCCATGGGAGCCGGGACCACTAAGACTGCTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR CAA 90 bp TACCCTCTGCTGGTGACGGTGTTTCTTCTGGTAGGACGGGAGTTCTaGGGCAGCCCGGGTCCGATGCTGACCTGCAGCACTTTGTTGCTG +
Preference number: 2 (lower is better)
Translates to: YPLLVTVFLLVGREF*GSPGPMLTCSTLLL
Trigger: CAGCAACAAAGTGCTGCAGGTCAGCATCGGACCCGGGCTGCCCAAGAACTCCCGTCCTACCAGAAGAAACACCGTCACCAGCAGAGGGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR-3UTR CCA 90 bp GAGTGGGCAGGAGGCTGTGGGATAGACACCAAGCAGTCCCCGCTACTTACACCATCACATGCTGGACCTTaGGGCCTCCTCCAGACACTC +
Preference number: 2 (lower is better)
Translates to: EWAGGCGIDTKQSPLLTPSHAGP*GLLQTL
Trigger: GAGTGTCTGGAGGAGGCCCCAAGGTCCAGCATGTGA...TGGTGTAAGTAGCGGGGACTGCTTGGTGTCTATCCCACAGCCTCCTGCCCACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR-3UTR TCA 90 bp ACCAGCAGTCTTAGTGGTCCCGGCTCCCATGGGCTCGGAAGGATGGCCTGCCCGGTACTGAGAGAGGAATaGGTGAGATGTGCTCTTCAA +
Preference number: 2 (lower is better)
Translates to: TSSLSGPGSHGLGRMACPVLREE*VRCALQ
Trigger: TTGAAGAGCACATCTCACTCATTCCTCTCTCAGTAC...CGGGCAGGCCATCCTTCCGAGCCCATGGGAGCCGGGACCACTAAGACTGCTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034745.9
ENSMUST00000214042.2
3UTR-3UTR GCA 90 bp GGGGGAAGGTGTCAGAATAGCTTCAGGCCTTGGTGTAGCAGTTGCTCACTGTCGCGCCTGGAGCTCCTCTaGCCACGTGTCAGTTTCCGA +
Preference number: 2 (lower is better)
Translates to: GGRCQNSFRPWCSSCSLSRLELL*PRVSFR
Trigger: TCGGAAACTGACACGTGGGCAGAGGAGCTCCAGGCG...CGACAGTGAGCAACTGCTACACCAAGGCCTGAAGCTATTCTGACACCTTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034745.9
ENSMUST00000214042.2
3UTR-3UTR TCA 90 bp ACATTACAAGCGAAGACCAAGAGAAAGCAAGACCATCAGCCCAGCACCCAACTTGTCCCCTGGACCTGGTaGGTGGGCAGGAGGCTGTGG +
Preference number: 2 (lower is better)
Translates to: TLQAKTKRKQDHQPSTQLVPWTW*VGRRLW
Trigger: CCACAGCCTCCTGCCCACTCACCAGGTCCAGGGGAC...AAGTTGGGTGCTGGGCTGATGGTCTTGCTTTCTCTTGGTCTTCGCTTGTAATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034745.9
ENSMUST00000214042.2
3UTR-3UTR TCA 90 bp CCAGCAGATACGCAGGAAAAGCCAAAAATTCTTCACTCTCCACGGCGGCATAGTGCCCGCCCTTGGCAGTaGCAGGTGAGTGCCTGTTCG +
Preference number: 2 (lower is better)
Translates to: PADTQEKPKILHSPRRHSARPWQ*QVSACS
Trigger: CGAACAGGCACTCACCTGTCACTGCCAAGGGCGGGC...ACTATGCCGCCGTGGAGAGTGAAGAATTTTTGGCTTTTCCTGCGTATCTGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR-3UTR CCA 90 bp GGAATGAGTGAGATGTGCTCTTCAACTAAAGGCACTTGTCATCGAGTCACCGCCATGGGCTCGGAAGGATaGCCTGCCCGCCCTTGGCAG +
Preference number: 2 (lower is better)
Translates to: GMSEMCSSTKGTCHRVTAMGSEG*PARPWQ
Trigger: CTGCCAAGGGCGGGCAGGCCATCCTTCCGAGCCCAT...GGCGGTGACTCGATGACAAGTGCCTTTAGTTGAAGAGCACATCTCACTCATTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034745.9
ENSMUST00000214042.2
3UTR-3UTR CCA 90 bp CACAGGAGAATTTCCTACAGGGAGAGGGTAAGGGGGTCTGAGGGACTGTGCGGGGATCTTGCCACCATCTaGTTCCCCACCTGGACTGAA +
Preference number: 2 (lower is better)
Translates to: HRRISYRERVRGSEGLCGDLATI*FPTWTE
Trigger: TTCAGTCCAGGTGGGGAACCAGATGGTGGCAAGATC...CCCGCACAGTCCCTCAGACCCCCTTACCCTCTCCCTGTAGGAAATTCTCCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR-3UTR TCA 90 bp TCTACCAAGAAATCAAAGACTCGTGCGTGCAGGGCCTTGGCGAGCGCGTCCCTGAGGAGCGGGTTGGATTaGAGGATGATGTCCTTCACA +
Preference number: 2 (lower is better)
Translates to: STKKSKTRACRALASASLRSGLD*RMMSFT
Trigger: TGTGAAGGACATCATCCTTCAATCCAACCCGCTCCT...CAGGGACGCGCTCGCCAAGGCCCTGCACGCACGAGTCTTTGATTTCTTGGTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR-3UTR TCA 90 bp CACAGGAGAATTTCCTACAGGGAGAGGGTAAGGGGGTCTGAGGGACTGTGCGGGAGTAGTCCATGCTGGTaGTGCCAAGGCTTTGCTTCT +
Preference number: 2 (lower is better)
Translates to: HRRISYRERVRGSEGLCGSSPCW*CQGFAS
Trigger: AGAAGCAAAGCCTTGGCATCACCAGCATGGACTACT...CCCGCACAGTCCCTCAGACCCCCTTACCCTCTCCCTGTAGGAAATTCTCCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR-3UTR GCA 90 bp GTTGAAGCTGAGTTCGTCCGTGTCCTGAGCATCATAGGCATACAAGGCCTTGCACCCTCACCCACAGCATaGATGGTGGCGCACACGTCA +
Preference number: 2 (lower is better)
Translates to: VEAEFVRVLSIIGIQGLAPSPTA*MVAHTS
Trigger: TGACGTGTGCGCCACCATGCATGCTGTGGGTGAGGG...TGCAAGGCCTTGTATGCCTATGATGCTCAGGACACGGACGAACTCAGCTTCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR-3UTR CCA 90 bp AAGTACAAGCACTTGGGGGTTAGCAGCAGGTCTCGCTTGACACCCTTGAACCTCGTGGGCAGGAGGCTGTaGGATAGACACCAAGCAGTC +
Preference number: 2 (lower is better)
Translates to: KYKHLGVSSRSRLTPLNLVGRRL*DRHQAV
Trigger: GACTGCTTGGTGTCTATCCCACAGCCTCCTGCCCAC...GAGGTTCAAGGGTGTCAAGCGAGACCTGCTGCTAACCCCCAAGTGCTTGTACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR-3UTR TCA 90 bp TCGGACTCCAGCAACACCCTGGTCCGGGACCTTGAGGAAATCCAGGCTCTCTGGGGATCATTTGTGGAGTaGCCCATAACTTGTCCTTGT +
Preference number: 2 (lower is better)
Translates to: SDSSNTLVRDLEEIQALWGSFVE*PITCPC
Trigger: ACAAGGACAAGTTATGGGTCACTCCACAAATGATCC...CCAGAGAGCCTGGATTTCCTCAAGGTCCCGGACCAGGGTGTTGCTGGAGTCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR-3UTR TCA 90 bp ATCGTTGGCGTTGAAGCTGAGTTCGTCCGTGTCCTGAGCATCATAGGCATACAACCTGGTCCGGGACCTTaGGGAAATCCAGGCTCTCTG +
Preference number: 2 (lower is better)
Translates to: IVGVEAEFVRVLSIIGIQPGPGP*GNPGSL
Trigger: CAGAGAGCCTGGATTTCCTCAAGGTCCCGGACCAGG...TTGTATGCCTATGATGCTCAGGACACGGACGAACTCAGCTTCAACGCCAACGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR-3UTR GCA 90 bp CCAGCAGATACGCAGGAAAAGCCAAAAATTCTTCACTCTCCACGGCGGCATAGTCGCCTGGAGCTCCTCTaGCCACGTGTCAGTTTCCGA +
Preference number: 2 (lower is better)
Translates to: PADTQEKPKILHSPRRHSRLELL*PRVSFR
Trigger: TCGGAAACTGACACGTGGGCAGAGGAGCTCCAGGCG...ACTATGCCGCCGTGGAGAGTGAAGAATTTTTGGCTTTTCCTGCGTATCTGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR-3UTR GCA 90 bp CAATCACATTCATGGCGTGCAGGGTTTCCTGGAAATCCCGCTTGTCATCAATGTCATCGAGTCACCGCCTaGTGTCCCCTGGACCTGGTG +
Preference number: 2 (lower is better)
Translates to: QSHSWRAGFPGNPACHQCHRVTA*CPLDLV
Trigger: CACCAGGTCCAGGGGACAGCAGGCGGTGACTCGATG...ACATTGATGACAAGCGGGATTTCCAGGAAACCCTGCACGCCATGAATGTGATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR-3UTR GCA 90 bp GTTGAAGCTGAGTTCGTCCGTGTCCTGAGCATCATAGGCATACAAGGCCTTGCAGGTCCGATGCTGACCTaGAGCACTTTGTTGCTGGGC +
Preference number: 2 (lower is better)
Translates to: VEAEFVRVLSIIGIQGLAGPMLT*STLLLG
Trigger: GCCCAGCAACAAAGTGCTGCAGGTCAGCATCGGACC...TGCAAGGCCTTGTATGCCTATGATGCTCAGGACACGGACGAACTCAGCTTCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR-3UTR CCA 90 bp ACAAGCGAAGACCAAGAGAAAGCAAGACCATCAGCCCAGCACCCAACTTCTTCCGTGGGCAGGAGGCTGTaGGATAGACACCAAGCAGTC +
Preference number: 2 (lower is better)
Translates to: TSEDQEKARPSAQHPTSSVGRRL*DRHQAV
Trigger: GACTGCTTGGTGTCTATCCCACAGCCTCCTGCCCAC...GGAAGAAGTTGGGTGCTGGGCTGATGGTCTTGCTTTCTCTTGGTCTTCGCTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034745.9
ENSMUST00000214042.2
3UTR-3UTR CCA 90 bp ATAGAATCTACCAAGAAATCAAAGACTCGTGCGTGCAGGGCCTTGGCGAGCGCGATGTCCTTCACATGCTaGACCTTGGGGCCTCCTCCA +
Preference number: 2 (lower is better)
Translates to: IESTKKSKTRACRALASAMSFTC*TLGPPP
Trigger: TGGAGGAGGCCCCAAGGTCCAGCATGTGAAGGACAT...CGCGCTCGCCAAGGCCCTGCACGCACGAGTCTTTGATTTCTTGGTAGATTCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR CAA 90 bp TCTGGGCCTTGCTTCACCTTCTCCCTTCCAATTAAGTACAAGCACTaGGGGGTTAGCAGCAGGTCTCGCTTGACACCCTTGAACCTCCTG +
Preference number: 2 (lower is better)
Translates to: SGPCFTFSLPIKYKH*GVSSRSRLTPLNLL
Trigger: CAGGAGGTTCAAGGGTGTCAAGCGAGACCTGCTGCTAACCCCCAAGTGCTTGTACTTAATTGGAAGGGAGAAGGTGAAGCAAGGCCCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR-3UTR TCA 90 bp GAGTGGGCAGGAGGCTGTGGGATAGACACCAAGCAGTCCCCGCTACTTACACCAGGATCATTTGTGGAGTaGCCCATAACTTGTCCTTGT +
Preference number: 2 (lower is better)
Translates to: EWAGGCGIDTKQSPLLTPGSFVE*PITCPC
Trigger: ACAAGGACAAGTTATGGGTCACTCCACAAATGATCC...TGGTGTAAGTAGCGGGGACTGCTTGGTGTCTATCCCACAGCCTCCTGCCCACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034745.9
ENSMUST00000214042.2
3UTR-3UTR TCA 90 bp GGACTGTGCGGGAATGCAGTGACTGTTTCTCTAGGCAAAGAGGAGAGGGCGCGTGGTTGGATTGAAGGATaGTGTCCTTCACATGCTGGA +
Preference number: 2 (lower is better)
Translates to: GLCGNAVTVSLGKEERARGWIEG*CPSHAG
Trigger: TCCAGCATGTGAAGGACATCATCCTTCAATCCAACC...ACGCGCCCTCTCCTCTTTGCCTAGAGAAACAGTCACTGCATTCCCGCACAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR-3UTR CCA 90 bp ATCTGCATCTGGAGCTTCTGTAGCAGAGTCTGGTCAGCCCCCTCACCCACAGCATTCCAATCACATTCATaGCGTGCAGGGTTTCCTGGA +
Preference number: 2 (lower is better)
Translates to: ICIWSFCSRVWSAPSPTAFQSHS*RAGFPG
Trigger: TCCAGGAAACCCTGCACGCCATGAATGTGATTGGAA...TGCTGTGGGTGAGGGGGCTGACCAGACTCTGCTACAGAAGCTCCAGATGCAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR-3UTR CCA 90 bp GGAATGAGTGAGATGTGCTCTTCAACTAAAGGCACTTGTCATCGAGTCACCGCCTCACCGAAGCCTTGGTaGAACTGCACTTGCCGGGAG +
Preference number: 2 (lower is better)
Translates to: GMSEMCSSTKGTCHRVTASPKPW*NCTCRE
Trigger: CTCCCGGCAAGTGCAGTTCCACCAAGGCTTCGGTGA...GGCGGTGACTCGATGACAAGTGCCTTTAGTTGAAGAGCACATCTCACTCATTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR-3UTR GCA 90 bp GGACGGCAGAGGGGTCACAGGAGAATTTCCTACAGGGAGAGGGTAAGGGGGTCTGGAATGAGTGAGATGTaGTCTTCAACTAAAGGCACT +
Preference number: 2 (lower is better)
Translates to: GRQRGHRRISYRERVRGSGMSEM*SSTKGT
Trigger: AGTGCCTTTAGTTGAAGAGCACATCTCACTCATTCC...AGACCCCCTTACCCTCTCCCTGTAGGAAATTCTCCTGTGACCCCTCTGCCGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034745.9
ENSMUST00000214042.2
3UTR-3UTR GCA 90 bp TCACCTTCTCCCTTCCAATTAAGTACAAGCACTTGGGGGTTAGCAGCAGGTCTCGAAATCAAAGACTCGTaGGTGCAGGGCCTTGGCGAG +
Preference number: 2 (lower is better)
Translates to: SPSPFQLSTSTWGLAAGLEIKDS*VQGLGE
Trigger: CTCGCCAAGGCCCTGCACGCACGAGTCTTTGATTTC...GAGACCTGCTGCTAACCCCCAAGTGCTTGTACTTAATTGGAAGGGAGAAGGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR-3UTR CCA 90 bp TCGGACTCCAGCAACACCCTGGTCCGGGACCTTGAGGAAATCCAGGCTCTCTGGTCATATTCTTGCTCGTaGAGAATGAAGATGTCATCC +
Preference number: 2 (lower is better)
Translates to: SDSSNTLVRDLEEIQALWSYSCS*RMKMSS
Trigger: GGATGACATCTTCATTCTCCACGAGCAAGAATATGA...CCAGAGAGCCTGGATTTCCTCAAGGTCCCGGACCAGGGTGTTGCTGGAGTCCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR-3UTR GCA 90 bp CCTTGCTTCACCTTCTCCCTTCCAATTAAGTACAAGCACTTGGGGGTTAGCAGCGTGATGCCAAGGCTTTaGTTCTGCTCTGGAGAGGCA +
Preference number: 2 (lower is better)
Translates to: PCFTFSLPIKYKHLGVSSVMPRL*FCSGEA
Trigger: TGCCTCTCCAGAGCAGAAGCAAAGCCTTGGCATCAC...GCTGCTAACCCCCAAGTGCTTGTACTTAATTGGAAGGGAGAAGGTGAAGCAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR-3UTR GCA 90 bp ATCGTTGGCGTTGAAGCTGAGTTCGTCCGTGTCCTGAGCATCATAGGCATACAACCTTTGTCTGGGCCTTaGTTCACCTTCTCCCTTCCA +
Preference number: 2 (lower is better)
Translates to: IVGVEAEFVRVLSIIGIQPLSGP*FTFSLP
Trigger: TGGAAGGGAGAAGGTGAAGCAAGGCCCAGACAAAGG...TTGTATGCCTATGATGCTCAGGACACGGACGAACTCAGCTTCAACGCCAACGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR-3UTR CCA 90 bp AAGTACAAGCACTTGGGGGTTAGCAGCAGGTCTCGCTTGACACCCTTGAACCTCAATAGCTTCAGGCCTTaGTGTAGCAGTTGCTCACTG +
Preference number: 2 (lower is better)
Translates to: KYKHLGVSSRSRLTPLNLNSFRP*CSSCSL
Trigger: CAGTGAGCAACTGCTACACCAAGGCCTGAAGCTATT...GAGGTTCAAGGGTGTCAAGCGAGACCTGCTGCTAACCCCCAAGTGCTTGTACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR-3UTR CCA 90 bp GGACTGTGCGGGAATGCAGTGACTGTTTCTCTAGGCAAAGAGGAGAGGGCGCGTAACATAAAACCAACATaGGCCAGCCACATTACAAGC +
Preference number: 2 (lower is better)
Translates to: GLCGNAVTVSLGKEERARNIKPT*ASHITS
Trigger: GCTTGTAATGTGGCTGGCCCATGTTGGTTTTATGTT...ACGCGCCCTCTCCTCTTTGCCTAGAGAAACAGTCACTGCATTCCCGCACAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034745.9
ENSMUST00000214042.2
3UTR-3UTR CCA 90 bp CCTTGCTTCACCTTCTCCCTTCCAATTAAGTACAAGCACTTGGGGGTTAGCAGCGCGTGCAGGGTTTCCTaGAAATCCCGCTTGTCATCA +
Preference number: 2 (lower is better)
Translates to: PCFTFSLPIKYKHLGVSSACRVS*KSRLSS
Trigger: TGATGACAAGCGGGATTTCCAGGAAACCCTGCACGC...GCTGCTAACCCCCAAGTGCTTGTACTTAATTGGAAGGGAGAAGGTGAAGCAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR CAA 90 bp CTTTCCACCTCGATCCTCCGCTTCAGGACTTCCTTCACAACACCTTaGTCTGGGCCTTGCTTCACCTTCTCCCTTCCAATTAAGTACAAG +
Preference number: 2 (lower is better)
Translates to: LSTSILRFRTSFTTP*SGPCFTFSLPIKYK
Trigger: CTTGTACTTAATTGGAAGGGAGAAGGTGAAGCAAGGCCCAGACAAAGGTGTTGTGAAGGAAGTCCTGAAGCGGAGGATCGAGGTGGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR-3UTR TCA 90 bp CCTACCTTCATGAATGGGTACAGTGGAATACTACCTGCTGCATTCATATGTGCTCGTATGACTCCGTTTTaGTGGCATCCTGGGGGAGCA +
Preference number: 2 (lower is better)
Translates to: PTFMNGYSGILPAAFICARMTPF*WHPGGA
Trigger: TGCTCCCCCAGGATGCCATCAAAACGGAGTCATACG...AGCACATATGAATGCAGCAGGTAGTATTCCACTGTACCCATTCATGAAGGTAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR-3UTR GCA 90 bp CCAGCAGATACGCAGGAAAAGCCAAAAATTCTTCACTCTCCACGGCGGCATAGTATTCCAGCCACAATCTaGAACACGAGAGTCTGCTCT +
Preference number: 2 (lower is better)
Translates to: PADTQEKPKILHSPRRHSIPATI*NTRVCS
Trigger: AGAGCAGACTCTCGTGTTGCAGATTGTGGCTGGAAT...ACTATGCCGCCGTGGAGAGTGAAGAATTTTTGGCTTTTCCTGCGTATCTGCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR-3UTR CCA 90 bp TTCTTTATTTTGCTTCCTGCGGTCGTTGGGCGCCCTTTCTTGTCAGCTTGCAGGGCGTCTGTAAGTACCTaGTGCGAGTCCTGTAATAAA +
Preference number: 2 (lower is better)
Translates to: FFILLPAVVGRPFLSACRASVST*CESCNK
Trigger: TTTATTACAGGACTCGCACCAGGTACTTACAGACGC...CCTGCAAGCTGACAAGAAAGGGCGCCCAACGACCGCAGGAAGCAAAATAAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR-3UTR CCA 90 bp ATTACAAGCGAAGACCAAGAGAAAGCAAGACCATCAGCCCAGCACCCAACTTCTAATAGCTTCAGGCCTTaGTGTAGCAGTTGCTCACTG +
Preference number: 2 (lower is better)
Translates to: ITSEDQEKARPSAQHPTSNSFRP*CSSCSL
Trigger: CAGTGAGCAACTGCTACACCAAGGCCTGAAGCTATT...AGAAGTTGGGTGCTGGGCTGATGGTCTTGCTTTCTCTTGGTCTTCGCTTGTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034745.9
ENSMUST00000214042.2
3UTR CAA 90 bp GGAACTAGACTACCTTTTAGGATCATTTGTGGAGTGACCCATAACTaGTCCTTGTCCCTAACCCAAGCTTTTCTGTGTCTTCCATGGGGG +
Preference number: 2 (lower is better)
Translates to: GTRLPFRIICGVTHN*SLSLTQAFLCLPWG
Trigger: CCCCCATGGAAGACACAGAAAAGCTTGGGTTAGGGACAAGGACAAGTTATGGGTCACTCCACAAATGATCCTAAAAGGTAGTCTAGTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034745.9
ENSMUST00000214042.2
3UTR CAA 90 bp CAGGAACTCCGTTTTAAAGACGGACTCCAGCAAACTGTCATATTCTaGCTCGTGGAGAATGAAGATGTCATCCTGCATGGTACTGAGGGA +
Preference number: 2 (lower is better)
Translates to: QELRFKDGLQQTVIF*LVENEDVILHGTEG
Trigger: TCCCTCAGTACCATGCAGGATGACATCTTCATTCTCCACGAGCAAGAATATGACAGTTTGCTGGAGTCCGTCTTTAAAACGGAGTTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR-3UTR TCA 90 bp GGAATGAGTGAGATGTGCTCTTCAACTAAAGGCACTTGTCATCGAGTCACCGCCGTTCAAGGGTATTGCTaGATTTCAGAGGTAGTTGCT +
Preference number: 2 (lower is better)
Translates to: GMSEMCSSTKGTCHRVTAVQGYC*ISEVVA
Trigger: AGCAACTACCTCTGAAATTCAGCAATACCCTTGAAC...GGCGGTGACTCGATGACAAGTGCCTTTAGTTGAAGAGCACATCTCACTCATTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR-3UTR CCA 90 bp ACAAGCGAAGACCAAGAGAAAGCAAGACCATCAGCCCAGCACCCAACTTCTTCCCCACCTGGACTGAACTaGATTTCAAAGTATTTTCCA +
Preference number: 2 (lower is better)
Translates to: TSEDQEKARPSAQHPTSSPPGLN*ISKYFP
Trigger: TGGAAAATACTTTGAAATCCAGTTCAGTCCAGGTGG...GGAAGAAGTTGGGTGCTGGGCTGATGGTCTTGCTTTCTCTTGGTCTTCGCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR-3UTR CCA 90 bp GACTTTATAAAAGGCAGCTCACTGCTCTGCATGAGTTCAATCAGGTCCATGAAACTGTTGAAGTGCTCATaGCTCCCGATCTGCATCTGG +
Preference number: 2 (lower is better)
Translates to: DFIKGSSLLCMSSIRSMKLLKCS*LPICIW
Trigger: CCAGATGCAGATCGGGAGCCATGAGCACTTCAACAG...TTTCATGGACCTGATTGAACTCATGCAGAGCAGTGAGCTGCCTTTTATAAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR TCA 72 bp CGGAAGGATGGCCTGCCCGCCCTTGGCAGTGACAGGTaGGTGCCTGTTCGCCCCAAGTCCAGCCTCCAGAGG +
Preference number: 3 (lower is better)
Translates to: RKDGLPALGSDR*VPVRPKSSLQR
Trigger: CCTCTGGAGGCTGGACTTGGGGCGAACAGGCACTCACCTGTCACTGCCAAGGGCGGGCAGGCCATCCTTCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034745.9
ENSMUST00000214042.2
3UTR GCA 72 bp AGGATGGCCTGCCCGCCCTTGGCAGTGACAGGTGAGTaGCTGTTCGCCCCAAGTCCAGCCTCCAGAGGGTGG +
Preference number: 3 (lower is better)
Translates to: RMACPPLAVTGE*LFAPSPASRGW
Trigger: CCACCCTCTGGAGGCTGGACTTGGGGCGAACAGGCACTCACCTGTCACTGCCAAGGGCGGGCAGGCCATCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034745.9
ENSMUST00000214042.2
3UTR TCA 72 bp ATGGGCTCGGAAGGATGGCCTGCCCGCCCTTGGCAGTaGCAGGTGAGTGCCTGTTCGCCCCAAGTCCAGCCT +
Preference number: 3 (lower is better)
Translates to: MGSEGWPARPWQ*QVSACSPQVQP
Trigger: AGGCTGGACTTGGGGCGAACAGGCACTCACCTGTCACTGCCAAGGGCGGGCAGGCCATCCTTCCGAGCCCAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034745.9
ENSMUST00000214042.2
3UTR GCA 72 bp TTGAGGATAGCCAGGTCACCGAAGCCTTGGTGGAACTaGACTTGCCGGGAGCCCCCTGCACTCCAGGGACCC +
Preference number: 3 (lower is better)
Translates to: LRIARSPKPWWN*TCREPPALQGP
Trigger: GGGTCCCTGGAGTGCAGGGGGCTCCCGGCAAGTGCAGTTCCACCAAGGCTTCGGTGACCTGGCTATCCTCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR GCA 72 bp AGGCTTAGGCTTGGGTTGAGGCTTTGGTCTGCCCCCTaGTGGGGGAGGCCGGCTGCTCGTTTGTCTTCGGAC +
Preference number: 3 (lower is better)
Translates to: RLRLGLRLWSAP*WGRPAARLSSD
Trigger: GTCCGAAGACAAACGAGCAGCCGGCCTCCCCCAGCAGGGGGCAGACCAAAGCCTCAACCCAAGCCTAAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR CCA 72 bp CTGGGCTTGAGGATAGCCAGGTCACCGAAGCCTTGGTaGAACTGCACTTGCCGGGAGCCCCCTGCACTCCAG +
Preference number: 3 (lower is better)
Translates to: LGLRIARSPKPW*NCTCREPPALQ
Trigger: CTGGAGTGCAGGGGGCTCCCGGCAAGTGCAGTTCCACCAAGGCTTCGGTGACCTGGCTATCCTCAAGCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR-3UTR CAA 90 bp GGACGGCAGAGGGGTCACAGGAGAATTTCCTACAGGGAGAGGGTAAGGGGGTCTATGGCCTGCCCGCCCTaGGCAGTGACAGGTGAGTGC +
Preference number: 3 (lower is better)
Translates to: GRQRGHRRISYRERVRGSMACPP*AVTGEC
Trigger: GCACTCACCTGTCACTGCCAAGGGCGGGCAGGCCAT...AGACCCCCTTACCCTCTCCCTGTAGGAAATTCTCCTGTGACCCCTCTGCCGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034745.9
ENSMUST00000214042.2
3UTR GCA 72 bp CGGGAGTTCTTGGGCAGCCCGGGTCCGATGCTGACCTaGAGCACTTTGTTGCTGGGCTTGAGGATAGCCAGG +
Preference number: 3 (lower is better)
Translates to: REFLGSPGPMLT*STLLLGLRIAR
Trigger: CCTGGCTATCCTCAAGCCCAGCAACAAAGTGCTGCAGGTCAGCATCGGACCCGGGCTGCCCAAGAACTCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR CCA 72 bp TTGCTGGGCTTGAGGATAGCCAGGTCACCGAAGCCTTaGTGGAACTGCACTTGCCGGGAGCCCCCTGCACTC +
Preference number: 3 (lower is better)
Translates to: LLGLRIARSPKP*WNCTCREPPAL
Trigger: GAGTGCAGGGGGCTCCCGGCAAGTGCAGTTCCACCAAGGCTTCGGTGACCTGGCTATCCTCAAGCCCAGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR CCA 72 bp CTACCAAGAAATCAAAGACTCGTGCGTGCAGGGCCTTaGCGAGCGCGTCCCTGGTGTAGCAGGCCTGCTCCA +
Preference number: 3 (lower is better)
Translates to: LPRNQRLVRAGP*RARPWCSRPAP
Trigger: TGGAGCAGGCCTGCTACACCAGGGACGCGCTCGCCAAGGCCCTGCACGCACGAGTCTTTGATTTCTTGGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR CCA 72 bp CTGAGACAATCGATCCGAGCCGGTGGACTGTTGCCTTaGCAAGGGTGGGCGGGCCATAGAGGTGTACAGGCT +
Preference number: 3 (lower is better)
Translates to: LRQSIRAGGLLP*QGWAGHRGVQA
Trigger: AGCCTGTACACCTCTATGGCCCGCCCACCCTTGCCAAGGCAACAGTCCACCGGCTCGGATCGATTGTCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR CCA 72 bp ACCCTGGTCCGGGACCTTGAGGAAATCCAGGCTCTCTaGCGTCTGAGACAATCGATCCGAGCCGGTGGACTG +
Preference number: 3 (lower is better)
Translates to: TLVRDLEEIQAL*RLRQSIRAGGL
Trigger: CAGTCCACCGGCTCGGATCGATTGTCTCAGACGCCAGAGAGCCTGGATTTCCTCAAGGTCCCGGACCAGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR CCA 72 bp CGGCTGCTCGTTTGTCTTCGGACTCCAGCAACACCCTaGTCCGGGACCTTGAGGAAATCCAGGCTCTCTGGC +
Preference number: 3 (lower is better)
Translates to: RLLVCLRTPATP*SGTLRKSRLSG
Trigger: GCCAGAGAGCCTGGATTTCCTCAAGGTCCCGGACCAGGGTGTTGCTGGAGTCCGAAGACAAACGAGCAGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR-3UTR CAA 90 bp GAGTGGGCAGGAGGCTGTGGGATAGACACCAAGCAGTCCCCGCTACTTACACCATTCACATGCTGGACCTaGGGGCCTCCTCCAGACACT +
Preference number: 3 (lower is better)
Translates to: EWAGGCGIDTKQSPLLTPFTCWT*GPPPDT
Trigger: AGTGTCTGGAGGAGGCCCCAAGGTCCAGCATGTGAA...TGGTGTAAGTAGCGGGGACTGCTTGGTGTCTATCCCACAGCCTCCTGCCCACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR-3UTR CAA 90 bp CACAGGAGAATTTCCTACAGGGAGAGGGTAAGGGGGTCTGAGGGACTGTGCGGGGGTGATGCCAAGGCTTaGCTTCTGCTCTGGAGAGGC +
Preference number: 3 (lower is better)
Translates to: HRRISYRERVRGSEGLCGGDAKA*LLLWRG
Trigger: GCCTCTCCAGAGCAGAAGCAAAGCCTTGGCATCACC...CCCGCACAGTCCCTCAGACCCCCTTACCCTCTCCCTGTAGGAAATTCTCCTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR-3UTR CAA 90 bp CAGCCCGGGTCCGATGCTGACCTGCAGCACTTTGTTGCTGGGCTTGAGGATAGCGTTGGGCGCCCTTTCTaGTCAGCTTGCAGGTTTTCA +
Preference number: 3 (lower is better)
Translates to: QPGSDADLQHFVAGLEDSVGRPF*SACRFS
Trigger: TGAAAACCTGCAAGCTGACAAGAAAGGGCGCCCAAC...GCTATCCTCAAGCCCAGCAACAAAGTGCTGCAGGTCAGCATCGGACCCGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR TCA 72 bp TCCGGGACCTTGAGGAAATCCAGGCTCTCTGGCGTCTaGGACAATCGATCCGAGCCGGTGGACTGTTGCCTT +
Preference number: 3 (lower is better)
Translates to: SGTLRKSRLSGV*DNRSEPVDCCL
Trigger: AAGGCAACAGTCCACCGGCTCGGATCGATTGTCTCAGACGCCAGAGAGCCTGGATTTCCTCAAGGTCCCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR-3UTR CAA 90 bp TCTACCAAGAAATCAAAGACTCGTGCGTGCAGGGCCTTGGCGAGCGCGTCCCTGCAGGAGCGGGTTGGATaGAAGGATGATGTCCTTCAC +
Preference number: 3 (lower is better)
Translates to: STKKSKTRACRALASASLQERVG*KDDVLH
Trigger: GTGAAGGACATCATCCTTCAATCCAACCCGCTCCTG...CAGGGACGCGCTCGCCAAGGCCCTGCACGCACGAGTCTTTGATTTCTTGGTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR-3UTR CAA 90 bp TTCTTTATTTTGCTTCCTGCGGTCGTTGGGCGCCCTTTCTTGTCAGCTTGCAGGCCTTGGTTCCAGCTGTaGAAGTGCTCATGGCTCCCG +
Preference number: 3 (lower is better)
Translates to: FFILLPAVVGRPFLSACRPWFQL*KCSWLP
Trigger: CGGGAGCCATGAGCACTTCAACAGCTGGAACCAAGG...CCTGCAAGCTGACAAGAAAGGGCGCCCAACGACCGCAGGAAGCAAAATAAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR-3UTR CAA 90 bp ATCGTTGGCGTTGAAGCTGAGTTCGTCCGTGTCCTGAGCATCATAGGCATACAACAGGTCACCGAAGCCTaGGTGGAACTGCACTTGCCG +
Preference number: 3 (lower is better)
Translates to: IVGVEAEFVRVLSIIGIQQVTEA*VELHLP
Trigger: CGGCAAGTGCAGTTCCACCAAGGCTTCGGTGACCTG...TTGTATGCCTATGATGCTCAGGACACGGACGAACTCAGCTTCAACGCCAACGAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR TCA 72 bp CAGGAGAATTTCCTACAGGGAGAGGGTAAGGGGGTCTaGGGGACTGTGCGGGAATGCAGTGACTGTTTCTCT +
Preference number: 3 (lower is better)
Translates to: QENFLQGEGKGV*GTVRECSDCFS
Trigger: AGAGAAACAGTCACTGCATTCCCGCACAGTCCCTCAGACCCCCTTACCCTCTCCCTGTAGGAAATTCTCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034745.9
ENSMUST00000214042.2
3UTR TCA 72 bp CCGAGAGGCTCAGGTAGTAATAGTAGTCCATGCTGGTaGTGCCAAGGCTTTGCTTCTGCTCTGGAGAGGCAC +
Preference number: 3 (lower is better)
Translates to: PRGSGSNSSPCW*CQGFASALERH
Trigger: GTGCCTCTCCAGAGCAGAAGCAAAGCCTTGGCATCACCAGCATGGACTACTATTACTACCTGAGCCTCTCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR CCA 72 bp GTCCATGCTGGTGATGCCAAGGCTTTGCTTCTGCTCTaGAGAGGCACCCTCAATGAGCTGGTAGAATATGTG +
Preference number: 3 (lower is better)
Translates to: VHAGDAKALLLL*RGTLNELVEYV
Trigger: CACATATTCTACCAGCTCATTGAGGGTGCCTCTCCAGAGCAGAAGCAAAGCCTTGGCATCACCAGCATGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR-3UTR CAA 90 bp TACCTTCATGAATGGGTACAGTGGAATACTACCTGCTGCATTCATATGTGCTTCATGGCCTGCCCGCCCTaGGCAGTGACAGGTGAGTGC +
Preference number: 3 (lower is better)
Translates to: YLHEWVQWNTTCCIHMCFMACPP*AVTGEC
Trigger: GCACTCACCTGTCACTGCCAAGGGCGGGCAGGCCAT...GAAGCACATATGAATGCAGCAGGTAGTATTCCACTGTACCCATTCATGAAGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034745.9
ENSMUST00000214042.2
3UTR CCA 72 bp TTCCATGGGGGAAGGTGTCAGAATAGCTTCAGGCCTTaGTGTAGCAGTTGCTCACTGTCGATCAGAAGAGGA +
Preference number: 3 (lower is better)
Translates to: FHGGRCQNSFRP*CSSCSLSIRRG
Trigger: TCCTCTTCTGATCGACAGTGAGCAACTGCTACACCAAGGCCTGAAGCTATTCTGACACCTTCCCCCATGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034745.9
ENSMUST00000214042.2
3UTR CCA 72 bp ATGGACTCTGACTTTCCTCCCCACTTACTGTCCATCTaGCGGCTCGTTAGCTTCTCTTTTAACCGGTCTTGG +
Preference number: 3 (lower is better)
Translates to: MDSDFPPHLLSI*RLVSFSFNRSW
Trigger: CCAAGACCGGTTAAAAGAGAAGCTAACGAGCCGCCAGATGGACAGTAAGTGGGGAGGAAAGTCAGAGTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR CCA 72 bp GGGGTGTGCATTTCATCAGGGTGCTCACCAGGTCGTTaGCTTGTTTCTTTATTTTGCTTCCTGCGGTCGTTG +
Preference number: 3 (lower is better)
Translates to: GVCISSGCSPGR*LVSLFCFLRSL
Trigger: CAACGACCGCAGGAAGCAAAATAAAGAAACAAGCCAACGACCTGGTGAGCACCCTGATGAAATGCACACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR CCA 72 bp GGCAGCTCTCATCGGGTAATTGTTCTTAGTTCCACCTaGATACCCTCTGCTGGTGACGGTGTTTCTTCTGGT +
Preference number: 3 (lower is better)
Translates to: GSSHRVIVLSST*IPSAGDGVSSG
Trigger: ACCAGAAGAAACACCGTCACCAGCAGAGGGTATCCAGGTGGAACTAAGAACAATTACCCGATGAGAGCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR TCA 72 bp ACTCGGATGTTTTCTTTGAGACCCAGGTACTCCACTTaGTGCTTCACTCTGCTCTCCTCCCAGTCTTTAGGC +
Preference number: 3 (lower is better)
Translates to: TRMFSLRPRYST*CFTLLSSQSLG
Trigger: GCCTAAAGACTGGGAGGAGAGCAGAGTGAAGCATCAAGTGGAGTACCTGGGTCTCAAAGAAAACATCCGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR TCA 72 bp TACTTCTCCCAAGCTGGAACTGGTCGCTGTCCATGTTaGCAGACTGCAGTAGATGGAGGACACCTTGTTTCT +
Preference number: 3 (lower is better)
Translates to: YFSQAGTGRCPC*QTAVDGGHLVS
Trigger: AGAAACAAGGTGTCCTCCATCTACTGCAGTCTGTCAACATGGACAGCGACCAGTTCCAGCTTGGGAGAAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR GCA 72 bp AGGTGTCAGAATAGCTTCAGGCCTTGGTGTAGCAGTTaGTCACTGTCGATCAGAAGAGGAGTCCCCAAAAGT +
Preference number: 3 (lower is better)
Translates to: RCQNSFRPWCSS*SLSIRRGVPKS
Trigger: ACTTTTGGGGACTCCTCTTCTGATCGACAGTGAGCAACTGCTACACCAAGGCCTGAAGCTATTCTGACACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034745.9
ENSMUST00000214042.2
3UTR GCA 72 bp TTTATTGATAGAATCTACCAAGAAATCAAAGACTCGTaGGTGCAGGGCCTTGGCGAGCGCGTCCCTGGTGTA +
Preference number: 3 (lower is better)
Translates to: FIDRIYQEIKDS*VQGLGERVPGV
Trigger: TACACCAGGGACGCGCTCGCCAAGGCCCTGCACGCACGAGTCTTTGATTTCTTGGTAGATTCTATCAATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR CCA 72 bp GAGTCTGCTCTTCCGAGAAGATTCCAATCACATTCATaGCGTGCAGGGTTTCCTGGAAATCCCGCTTGTCAT +
Preference number: 3 (lower is better)
Translates to: ESALPRRFQSHS*RAGFPGNPACH
Trigger: ATGACAAGCGGGATTTCCAGGAAACCCTGCACGCCATGAATGTGATTGGAATCTTCTCGGAAGAGCAGACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR CCA 72 bp TCTGGGGCTTTGATGAACACTTTACTTCTCCCAAGCTaGAACTGGTCGCTGTCCATGTTGACAGACTGCAGT +
Preference number: 3 (lower is better)
Translates to: SGALMNTLLLPS*NWSLSMLTDCS
Trigger: ACTGCAGTCTGTCAACATGGACAGCGACCAGTTCCAGCTTGGGAGAAGTAAAGTGTTCATCAAAGCCCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR-3UTR CAA 90 bp ATTTCTTGCGGGCCACGAACTTCCTCCATGTTTTCTGTATCACACGTGCGTAACTCCTGGAAATCCCGCTaGTCATCAATGTCATCCACC +
Preference number: 3 (lower is better)
Translates to: ISCGPRTSSMFSVSHVRNSWKSR*SSMSST
Trigger: GGTGGATGACATTGATGACAAGCGGGATTTCCAGGA...GTTACGCACGTGTGATACAGAAAACATGGAGGAAGTTCGTGGCCCGCAAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR-3UTR CAA 90 bp GGAATGAGTGAGATGTGCTCTTCAACTAAAGGCACTTGTCATCGAGTCACCGCCATAATATCGTTGGCGTaGAAGCTGAGTTCGTCCGTG +
Preference number: 3 (lower is better)
Translates to: GMSEMCSSTKGTCHRVTAIISLA*KLSSSV
Trigger: CACGGACGAACTCAGCTTCAACGCCAACGATATTAT...GGCGGTGACTCGATGACAAGTGCCTTTAGTTGAAGAGCACATCTCACTCATTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR GCA 72 bp TGCTCTTCCGAGAAGATTCCAATCACATTCATGGCGTaGAGGGTTTCCTGGAAATCCCGCTTGTCATCAATG +
Preference number: 3 (lower is better)
Translates to: CSSEKIPITFMA*RVSWKSRLSSM
Trigger: CATTGATGACAAGCGGGATTTCCAGGAAACCCTGCACGCCATGAATGTGATTGGAATCTTCTCGGAAGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR GCA 72 bp CTGATGTTTCCCAAGTGGAGAATTCCAGCCACAATCTaGAACACGAGAGTCTGCTCTTCCGAGAAGATTCCA +
Preference number: 3 (lower is better)
Translates to: LMFPKWRIPATI*NTRVCSSEKIP
Trigger: TGGAATCTTCTCGGAAGAGCAGACTCTCGTGTTGCAGATTGTGGCTGGAATTCTCCACTTGGGAAACATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR CCA 72 bp GCTTTGATGAACACTTTACTTCTCCCAAGCTGGAACTaGTCGCTGTCCATGTTGACAGACTGCAGTAGATGG +
Preference number: 3 (lower is better)
Translates to: ALMNTLLLPSWN*SLSMLTDCSRW
Trigger: CCATCTACTGCAGTCTGTCAACATGGACAGCGACCAGTTCCAGCTTGGGAGAAGTAAAGTGTTCATCAAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR TCA 72 bp AAGCATAACCAGCTCTTCTCACTCGGATGTTTTCTTTaGGACCCAGGTACTCCACTTGATGCTTCACTCTGC +
Preference number: 3 (lower is better)
Translates to: KHNQLFSLGCFL*DPGTPLDASLC
Trigger: GCAGAGTGAAGCATCAAGTGGAGTACCTGGGTCTCAAAGAAAACATCCGAGTGAGAAGAGCTGGTTATGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR GCA 72 bp CTTCCTGCGGTCGTTGGGCGCCCTTTCTTGTCAGCTTaGAGGTTTTCAGGAAATAAAGACTTTATAAAAGGC +
Preference number: 3 (lower is better)
Translates to: LPAVVGRPFLSA*RFSGNKDFIKG
Trigger: GCCTTTTATAAAGTCTTTATTTCCTGAAAACCTGCAAGCTGACAAGAAAGGGCGCCCAACGACCGCAGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR GCA 72 bp GGCCACGAACTTCCTCCATGTTTTCTGTATCACACGTaGGTAACCATCGTACTTTCTCTCTCTCATCTCTTC +
Preference number: 3 (lower is better)
Translates to: GHELPPCFLYHT*VTIVLSLSHLF
Trigger: GAAGAGATGAGAGAGAGAAAGTACGATGGTTACGCACGTGTGATACAGAAAACATGGAGGAAGTTCGTGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR GCA 72 bp TTCAGGACTTCCTTCACAACACCTTTGTCTGGGCCTTaGTTCACCTTCTCCCTTCCAATTAAGTACAAGCAC +
Preference number: 3 (lower is better)
Translates to: FRTSFTTPLSGP*FTFSLPIKYKH
Trigger: GTGCTTGTACTTAATTGGAAGGGAGAAGGTGAAGCAAGGCCCAGACAAAGGTGTTGTGAAGGAAGTCCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR CCA 72 bp ATCTGGCGGCTCGTTAGCTTCTCTTTTAACCGGTCTTaGTTTATACCCAGCAGATACGCAGGAAAAGCCAAA +
Preference number: 3 (lower is better)
Translates to: IWRLVSFSFNRS*FIPSRYAGKAK
Trigger: TTTGGCTTTTCCTGCGTATCTGCTGGGTATAAACCAAGACCGGTTAAAAGAGAAGCTAACGAGCCGCCAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR TCA 72 bp TTGAAATATTCAATGGGTGTCCATCTTATTCCCTCCTaGACGTATTCTTCCTGCTCTGCTTTTAGCGTCAGC +
Preference number: 3 (lower is better)
Translates to: LKYSMGVHLIPS*TYSSCSAFSVS
Trigger: GCTGACGCTAAAAGCAGAGCAGGAAGAATACGTTCAGGAGGGAATAAGATGGACACCCATTGAATATTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR GCA 72 bp GTTTTAAAGACGGACTCCAGCAAACTGTCATATTCTTaGTCGTGGAGAATGAAGATGTCATCCTGCATGGTA +
Preference number: 3 (lower is better)
Translates to: VLKTDSSKLSYS*SWRMKMSSCMV
Trigger: TACCATGCAGGATGACATCTTCATTCTCCACGAGCAAGAATATGACAGTTTGCTGGAGTCCGTCTTTAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR GCA 72 bp GGAAATAAAGACTTTATAAAAGGCAGCTCACTGCTCTaGATGAGTTCAATCAGGTCCATGAAAAGCACATCC +
Preference number: 3 (lower is better)
Translates to: GNKDFIKGSSLL*MSSIRSMKSTS
Trigger: GGATGTGCTTTTCATGGACCTGATTGAACTCATGCAGAGCAGTGAGCTGCCTTTTATAAAGTCTTTATTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR CAA 72 bp GGCTCCCATGGGCTCGGAAGGATGGCCTGCCCGCCCTaGGCAGTGACAGGTGAGTGCCTGTTCGCCCCAAGT +
Preference number: 4 (lower is better)
Translates to: GSHGLGRMACPP*AVTGECLFAPS
Trigger: ACTTGGGGCGAACAGGCACTCACCTGTCACTGCCAAGGGCGGGCAGGCCATCCTTCCGAGCCCATGGGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034745.9
ENSMUST00000214042.2
3UTR CAA 72 bp GGCCTTGCACTGTGGCACCTGAGGCTTAGGCTTGGGTaGAGGCTTTGGTCTGCCCCCTGCTGGGGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: GLALWHLRLRLG*RLWSAPCWGRP
Trigger: CGGCCTCCCCCAGCAGGGGGCAGACCAAAGCCTCAACCCAAGCCTAAGCCTCAGGTGCCACAGTGCAAGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
CDS-3UTR GCA 90 bp CCACCAGCAGTCTTAGTGGTCCCGGCTCCCATGGGCTCGGAAGGATGGCCTGCCTCAAAGACTCGTGCGTaGAGGGCCTTGGCGAGCGCG +
Preference number: 4 (lower is better)
Translates to: PPAVLVVPAPMGSEGWPASKTRA*RALASA
Trigger: CGCGCTCGCCAAGGCCCTGCACGCACGAGTCTTTGA...GGCAGGCCATCCTTCCGAGCCCATGGGAGCCGGGACCACTAAGACTGCTGGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR GCA 90 bp AGGCACTTGTCATCGAGTCACCGCCTGCTGTCCCCTGGACCTGGTGAGTGGGCAGAGCCGGTGGACTGTTaGCTTGGCAAGGGTGGGCGG +
Preference number: 4 (lower is better)
Translates to: RHLSSSHRLLSPGPGEWAEPVDC*LGKGGR
Trigger: CCGCCCACCCTTGCCAAGGCAACAGTCCACCGGCTC...TGCCCACTCACCAGGTCCAGGGGACAGCAGGCGGTGACTCGATGACAAGTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR GCA 90 bp CCTGGTGAGTGGGCAGGAGGCTGTGGGATAGACACCAAGCAGTCCCCGCTACTTTTGCCGGGAGCCCCCTaGACTCCAGGGACCCCAGTT +
Preference number: 4 (lower is better)
Translates to: PGEWAGGCGIDTKQSPLLLPGAP*TPGTPV
Trigger: AACTGGGGTCCCTGGAGTGCAGGGGGCTCCCGGCAA...AAGTAGCGGGGACTGCTTGGTGTCTATCCCACAGCCTCCTGCCCACTCACCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR GCA 90 bp CCACCAGCAGTCTTAGTGGTCCCGGCTCCCATGGGCTCGGAAGGATGGCCTGCCAGGCATACAAGGCCTTaGACTGTGGCACCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: PPAVLVVPAPMGSEGWPARHTRP*TVAPEA
Trigger: AGCCTCAGGTGCCACAGTGCAAGGCCTTGTATGCCT...GGCAGGCCATCCTTCCGAGCCCATGGGAGCCGGGACCACTAAGACTGCTGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR CCA 90 bp CCACCAGCAGTCTTAGTGGTCCCGGCTCCCATGGGCTCGGAAGGATGGCCTGCCATGTCCTTCACATGCTaGACCTTGGGGCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: PPAVLVVPAPMGSEGWPAMSFTC*TLGPPP
Trigger: TGGAGGAGGCCCCAAGGTCCAGCATGTGAAGGACAT...GGCAGGCCATCCTTCCGAGCCCATGGGAGCCGGGACCACTAAGACTGCTGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR CCA 90 bp CCTGGTGAGTGGGCAGGAGGCTGTGGGATAGACACCAAGCAGTCCCCGCTACTTGGTGGACTGTTGCCTTaGCAAGGGTGGGCGGGCCAT +
Preference number: 4 (lower is better)
Translates to: PGEWAGGCGIDTKQSPLLGGLLP*QGWAGH
Trigger: ATGGCCCGCCCACCCTTGCCAAGGCAACAGTCCACC...AAGTAGCGGGGACTGCTTGGTGTCTATCCCACAGCCTCCTGCCCACTCACCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR CCA 90 bp CCACCAGCAGTCTTAGTGGTCCCGGCTCCCATGGGCTCGGAAGGATGGCCTGCCCAAGGCCTTGCACTGTaGCACCTGAGGCTTAGGCTT +
Preference number: 4 (lower is better)
Translates to: PPAVLVVPAPMGSEGWPAQGLAL*HLRLRL
Trigger: AAGCCTAAGCCTCAGGTGCCACAGTGCAAGGCCTTG...GGCAGGCCATCCTTCCGAGCCCATGGGAGCCGGGACCACTAAGACTGCTGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
3UTR CAA 72 bp GTTGCTGGGCTTGAGGATAGCCAGGTCACCGAAGCCTaGGTGGAACTGCACTTGCCGGGAGCCCCCTGCACT +
Preference number: 4 (lower is better)
Translates to: VAGLEDSQVTEA*VELHLPGAPCT
Trigger: AGTGCAGGGGGCTCCCGGCAAGTGCAGTTCCACCAAGGCTTCGGTGACCTGGCTATCCTCAAGCCCAGCAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR CAA 72 bp GGCAGCCCGGGTCCGATGCTGACCTGCAGCACTTTGTaGCTGGGCTTGAGGATAGCCAGGTCACCGAAGCCT +
Preference number: 4 (lower is better)
Translates to: GSPGPMLTCSTL*LGLRIARSPKP
Trigger: AGGCTTCGGTGACCTGGCTATCCTCAAGCCCAGCAACAAAGTGCTGCAGGTCAGCATCGGACCCGGGCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
CDS-3UTR TCA 90 bp CTTCTTCCCACCAGCAGTCTTAGTGGTCCCGGCTCCCATGGGCTCGGAAGGATGAGGCTCTCTGGCGTCTaGGACAATCGATCCGAGCCG +
Preference number: 4 (lower is better)
Translates to: LLPTSSLSGPGSHGLGRMRLSGV*DNRSEP
Trigger: CGGCTCGGATCGATTGTCTCAGACGCCAGAGAGCCT...CATCCTTCCGAGCCCATGGGAGCCGGGACCACTAAGACTGCTGGTGGGAAGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR GCA 90 bp ACCAGCAGTCTTAGTGGTCCCGGCTCCCATGGGCTCGGAAGGATGGCCTGCCCGTCATGGCTCCCGATCTaGATCTGGAGCTTCTGTAGC +
Preference number: 4 (lower is better)
Translates to: TSSLSGPGSHGLGRMACPSWLPI*IWSFCS
Trigger: GCTACAGAAGCTCCAGATGCAGATCGGGAGCCATGA...CGGGCAGGCCATCCTTCCGAGCCCATGGGAGCCGGGACCACTAAGACTGCTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR GCA 90 bp CACAGGAGAATTTCCTACAGGGAGAGGGTAAGGGGGTCTGAGGGACTGTGCGGGCTGGGGGAGGCCGGCTaGTCGTTTGTCTTCGGACTC +
Preference number: 4 (lower is better)
Translates to: HRRISYRERVRGSEGLCGLGEAG*SFVFGL
Trigger: GAGTCCGAAGACAAACGAGCAGCCGGCCTCCCCCAG...CCCGCACAGTCCCTCAGACCCCCTTACCCTCTCCCTGTAGGAAATTCTCCTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR CCA 90 bp GGGGGAAGGTGTCAGAATAGCTTCAGGCCTTGGTGTAGCAGTTGCTCACTGTCGGTGCGTGCAGGGCCTTaGCGAGCGCGTCCCTGGTGT +
Preference number: 4 (lower is better)
Translates to: GGRCQNSFRPWCSSCSLSVRAGP*RARPWC
Trigger: ACACCAGGGACGCGCTCGCCAAGGCCCTGCACGCAC...CGACAGTGAGCAACTGCTACACCAAGGCCTGAAGCTATTCTGACACCTTCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR CCA 90 bp GAGTGGGCAGGAGGCTGTGGGATAGACACCAAGCAGTCCCCGCTACTTACACCACTTGGGTTGAGGCTTTaGTCTGCCCCCTGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: EWAGGCGIDTKQSPLLTPLGLRL*SAPCWG
Trigger: CCCCCAGCAGGGGGCAGACCAAAGCCTCAACCCAAG...TGGTGTAAGTAGCGGGGACTGCTTGGTGTCTATCCCACAGCCTCCTGCCCACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
3UTR CAA 72 bp TTGGGCAGCCCGGGTCCGATGCTGACCTGCAGCACTTaGTTGCTGGGCTTGAGGATAGCCAGGTCACCGAAG +
Preference number: 4 (lower is better)
Translates to: LGSPGPMLTCST*LLGLRIARSPK
Trigger: CTTCGGTGACCTGGCTATCCTCAAGCCCAGCAACAAAGTGCTGCAGGTCAGCATCGGACCCGGGCTGCCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR CAA 72 bp CTGGTGACGGTGTTTCTTCTGGTAGGACGGGAGTTCTaGGGCAGCCCGGGTCCGATGCTGACCTGCAGCACT +
Preference number: 4 (lower is better)
Translates to: LVTVFLLVGREF*GSPGPMLTCST
Trigger: AGTGCTGCAGGTCAGCATCGGACCCGGGCTGCCCAAGAACTCCCGTCCTACCAGAAGAAACACCGTCACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR CAA 72 bp TGGCGTCTGAGACAATCGATCCGAGCCGGTGGACTGTaGCCTTGGCAAGGGTGGGCGGGCCATAGAGGTGTA +
Preference number: 4 (lower is better)
Translates to: WRLRQSIRAGGL*PWQGWAGHRGV
Trigger: TACACCTCTATGGCCCGCCCACCCTTGCCAAGGCAACAGTCCACCGGCTCGGATCGATTGTCTCAGACGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
CDS-3UTR CCA 90 bp CTTCTTCCCACCAGCAGTCTTAGTGGTCCCGGCTCCCATGGGCTCGGAAGGATGTCACATGCTGGACCTTaGGGCCTCCTCCAGACACTC +
Preference number: 4 (lower is better)
Translates to: LLPTSSLSGPGSHGLGRMSHAGP*GLLQTL
Trigger: GAGTGTCTGGAGGAGGCCCCAAGGTCCAGCATGTGA...CATCCTTCCGAGCCCATGGGAGCCGGGACCACTAAGACTGCTGGTGGGAAGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR CCA 90 bp ACCAGCAGTCTTAGTGGTCCCGGCTCCCATGGGCTCGGAAGGATGGCCTGCCCGGAAATCCAGGCTCTCTaGCGTCTGAGACAATCGATC +
Preference number: 4 (lower is better)
Translates to: TSSLSGPGSHGLGRMACPEIQAL*RLRQSI
Trigger: GATCGATTGTCTCAGACGCCAGAGAGCCTGGATTTC...CGGGCAGGCCATCCTTCCGAGCCCATGGGAGCCGGGACCACTAAGACTGCTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR GCA 90 bp CCACCAGCAGTCTTAGTGGTCCCGGCTCCCATGGGCTCGGAAGGATGGCCTGCCATTCCAGCCACAATCTaGAACACGAGAGTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: PPAVLVVPAPMGSEGWPAIPATI*NTRVCS
Trigger: AGAGCAGACTCTCGTGTTGCAGATTGTGGCTGGAAT...GGCAGGCCATCCTTCCGAGCCCATGGGAGCCGGGACCACTAAGACTGCTGGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR GCA 90 bp GTGTCTTCCATGGGGGAAGGTGTCAGAATAGCTTCAGGCCTTGGTGTAGCAGTTCTTTGGTCTGCCCCCTaGTGGGGGAGGCCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: VSSMGEGVRIASGLGVAVLWSAP*WGRPAA
Trigger: AGCAGCCGGCCTCCCCCAGCAGGGGGCAGACCAAAG...AACTGCTACACCAAGGCCTGAAGCTATTCTGACACCTTCCCCCATGGAAGACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR CCA 90 bp CCACCAGCAGTCTTAGTGGTCCCGGCTCCCATGGGCTCGGAAGGATGGCCTGCCTTCCAATCACATTCATaGCGTGCAGGGTTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: PPAVLVVPAPMGSEGWPAFQSHS*RAGFPG
Trigger: TCCAGGAAACCCTGCACGCCATGAATGTGATTGGAA...GGCAGGCCATCCTTCCGAGCCCATGGGAGCCGGGACCACTAAGACTGCTGGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR CCA 90 bp TACAAGCGAAGACCAAGAGAAAGCAAGACCATCAGCCCAGCACCCAACTTCTTCTGGTCTGCCCCCTGCTaGGGGAGGCCGGCTGCTCGT +
Preference number: 4 (lower is better)
Translates to: YKRRPRESKTISPAPNFFWSAPC*GRPAAR
Trigger: ACGAGCAGCCGGCCTCCCCCAGCAGGGGGCAGACCA...GAAGAAGTTGGGTGCTGGGCTGATGGTCTTGCTTTCTCTTGGTCTTCGCTTGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR TCA 90 bp CCACCAGCAGTCTTAGTGGTCCCGGCTCCCATGGGCTCGGAAGGATGGCCTGCCGTTCCCCACCTGGACTaGACTGGATTTCAAAGTATT +
Preference number: 4 (lower is better)
Translates to: PPAVLVVPAPMGSEGWPAVPHLD*TGFQSI
Trigger: AATACTTTGAAATCCAGTTCAGTCCAGGTGGGGAAC...GGCAGGCCATCCTTCCGAGCCCATGGGAGCCGGGACCACTAAGACTGCTGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR TCA 90 bp AGGCACTTGTCATCGAGTCACCGCCTGCTGTCCCCTGGACCTGGTGAGTGGGCACTTGCTCGTGGAGAATaGAGATGTCATCCTGCATGG +
Preference number: 4 (lower is better)
Translates to: RHLSSSHRLLSPGPGEWALARGE*RCHPAW
Trigger: CCATGCAGGATGACATCTTCATTCTCCACGAGCAAG...TGCCCACTCACCAGGTCCAGGGGACAGCAGGCGGTGACTCGATGACAAGTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR TCA 90 bp CACAGGAGAATTTCCTACAGGGAGAGGGTAAGGGGGTCTGAGGGACTGTGCGGGCGTATGACTCCGTTTTaGTGGCATCCTGGGGGAGCA +
Preference number: 4 (lower is better)
Translates to: HRRISYRERVRGSEGLCGRMTPF*WHPGGA
Trigger: TGCTCCCCCAGGATGCCATCAAAACGGAGTCATACG...CCCGCACAGTCCCTCAGACCCCCTTACCCTCTCCCTGTAGGAAATTCTCCTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR GCA 90 bp CCTGGTGAGTGGGCAGGAGGCTGTGGGATAGACACCAAGCAGTCCCCGCTACTTGTGATGCCAAGGCTTTaGTTCTGCTCTGGAGAGGCA +
Preference number: 4 (lower is better)
Translates to: PGEWAGGCGIDTKQSPLLVMPRL*FCSGEA
Trigger: TGCCTCTCCAGAGCAGAAGCAAAGCCTTGGCATCAC...AAGTAGCGGGGACTGCTTGGTGTCTATCCCACAGCCTCCTGCCCACTCACCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR GCA 90 bp TCAGGCCTTGGTGTAGCAGTTGCTCACTGTCGATCAGAAGAGGAGTCCCCAAAAGTTGAGGCTTTGGTCTaGCCCCTGCTGGGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: SGLGVAVAHCRSEEESPKVEALV*PLLGEA
Trigger: GGCCTCCCCCAGCAGGGGGCAGACCAAAGCCTCAAC...TTTTGGGGACTCCTCTTCTGATCGACAGTGAGCAACTGCTACACCAAGGCCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR CCA 90 bp GGTGAGTGGGCAGGAGGCTGTGGGATAGACACCAAGCAGTCCCCGCTACTTACATTCTGTAGCAGAGTCTaGTCAGCCCCCTCACCCACA +
Preference number: 4 (lower is better)
Translates to: GEWAGGCGIDTKQSPLLTFCSRV*SAPSPT
Trigger: TGTGGGTGAGGGGGCTGACCAGACTCTGCTACAGAA...TGTAAGTAGCGGGGACTGCTTGGTGTCTATCCCACAGCCTCCTGCCCACTCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR CCA 90 bp CTTCTTCCCACCAGCAGTCTTAGTGGTCCCGGCTCCCATGGGCTCGGAAGGATGCTCCCGATCTGCATCTaGAGCTTCTGTAGCAGAGTC +
Preference number: 4 (lower is better)
Translates to: LLPTSSLSGPGSHGLGRMLPICI*SFCSRV
Trigger: GACTCTGCTACAGAAGCTCCAGATGCAGATCGGGAG...CATCCTTCCGAGCCCATGGGAGCCGGGACCACTAAGACTGCTGGTGGGAAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
3UTR CAA 72 bp GGTCCGATGCTGACCTGCAGCACTTTGTTGCTGGGCTaGAGGATAGCCAGGTCACCGAAGCCTTGGTGGAAC +
Preference number: 4 (lower is better)
Translates to: GPMLTCSTLLLG*RIARSPKPWWN
Trigger: GTTCCACCAAGGCTTCGGTGACCTGGCTATCCTCAAGCCCAGCAACAAAGTGCTGCAGGTCAGCATCGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
CDS-3UTR TCA 90 bp GGACTGTGCGGGAATGCAGTGACTGTTTCTCTAGGCAAAGAGGAGAGGGCGCGTCCCAGGTACTCCACTTaGTGCTTCACTCTGCTCTCC +
Preference number: 4 (lower is better)
Translates to: GLCGNAVTVSLGKEERARPRYST*CFTLLS
Trigger: GGAGAGCAGAGTGAAGCATCAAGTGGAGTACCTGGG...ACGCGCCCTCTCCTCTTTGCCTAGAGAAACAGTCACTGCATTCCCGCACAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR GCA 90 bp CACAGGAGAATTTCCTACAGGGAGAGGGTAAGGGGGTCTGAGGGACTGTGCGGGTCGTCCACACCACTGTaGTTGACATTGTGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: HRRISYRERVRGSEGLCGSSTPL*LTLWLC
Trigger: GCAGAGCCACAATGTCAAGCACAGTGGTGTGGACGA...CCCGCACAGTCCCTCAGACCCCCTTACCCTCTCCCTGTAGGAAATTCTCCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034745.9
ENSMUST00000214042.2
CDS-3UTR GCA 90 bp GAGTGGGCAGGAGGCTGTGGGATAGACACCAAGCAGTCCCCGCTACTTACACCATTAGGAAACAGGCCCTaGTTGCCTCGTAGTCTACCC +
Preference number: 4 (lower is better)
Translates to: EWAGGCGIDTKQSPLLTPLGNRP*LPRSLP
Trigger: GGGTAGACTACGAGGCAAGCAGGGCCTGTTTCCTAA...TGGTGTAAGTAGCGGGGACTGCTTGGTGTCTATCCCACAGCCTCCTGCCCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR CCA 90 bp GGTGAGTGGGCAGGAGGCTGTGGGATAGACACCAAGCAGTCCCCGCTACTTACATGGTTTCCAAAGGCATaGGGAGGAGGCACAAACTGG +
Preference number: 4 (lower is better)
Translates to: GEWAGGCGIDTKQSPLLTWFPKA*GGGTNW
Trigger: CCAGTTTGTGCCTCCTCCCCATGCCTTTGGAAACCA...TGTAAGTAGCGGGGACTGCTTGGTGTCTATCCCACAGCCTCCTGCCCACTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR TCA 90 bp CTTCTTCCCACCAGCAGTCTTAGTGGTCCCGGCTCCCATGGGCTCGGAAGGATGGGTTGGATTGAAGGATaGTGTCCTTCACATGCTGGA +
Preference number: 4 (lower is better)
Translates to: LLPTSSLSGPGSHGLGRMGWIEG*CPSHAG
Trigger: TCCAGCATGTGAAGGACATCATCCTTCAATCCAACC...CATCCTTCCGAGCCCATGGGAGCCGGGACCACTAAGACTGCTGGTGGGAAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR TCA 90 bp GGTGAGTGGGCAGGAGGCTGTGGGATAGACACCAAGCAGTCCCCGCTACTTACAAGTAGTCCATGCTGGTaGTGCCAAGGCTTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: GEWAGGCGIDTKQSPLLTSSPCW*CQGFAS
Trigger: AGAAGCAAAGCCTTGGCATCACCAGCATGGACTACT...TGTAAGTAGCGGGGACTGCTTGGTGTCTATCCCACAGCCTCCTGCCCACTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR GCA 90 bp CACAGGAGAATTTCCTACAGGGAGAGGGTAAGGGGGTCTGAGGGACTGTGCGGGTGCATTTCATCAGGGTaGTCACCAGGTCGTTGGCTT +
Preference number: 4 (lower is better)
Translates to: HRRISYRERVRGSEGLCGCISSG*SPGRWL
Trigger: AAGCCAACGACCTGGTGAGCACCCTGATGAAATGCA...CCCGCACAGTCCCTCAGACCCCCTTACCCTCTCCCTGTAGGAAATTCTCCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR GCA 90 bp GGAATGAGTGAGATGTGCTCTTCAACTAAAGGCACTTGTCATCGAGTCACCGCCTGGTGGAACTGCACTTaGCGGGAGCCCCCTGCACTC +
Preference number: 4 (lower is better)
Translates to: GMSEMCSSTKGTCHRVTAWWNCT*REPPAL
Trigger: GAGTGCAGGGGGCTCCCGGCAAGTGCAGTTCCACCA...GGCGGTGACTCGATGACAAGTGCCTTTAGTTGAAGAGCACATCTCACTCATTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR GCA 90 bp CAAGCGAAGACCAAGAGAAAGCAAGACCATCAGCCCAGCACCCAACTTCTTCCCGAAACAGGCCCTGCTTaGCTCGTAGTCTACCCGTCC +
Preference number: 4 (lower is better)
Translates to: QAKTKRKQDHQPSTQLLPETGPA*LVVYPS
Trigger: GGACGGGTAGACTACGAGGCAAGCAGGGCCTGTTTC...GGGAAGAAGTTGGGTGCTGGGCTGATGGTCTTGCTTTCTCTTGGTCTTCGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR CCA 90 bp ATTACAAGCGAAGACCAAGAGAAAGCAAGACCATCAGCCCAGCACCCAACTTCTTGGCGAGCGCGTCCCTaGTGTAGCAGGCCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: ITSEDQEKARPSAQHPTSWRARP*CSRPAP
Trigger: TGGAGCAGGCCTGCTACACCAGGGACGCGCTCGCCA...AGAAGTTGGGTGCTGGGCTGATGGTCTTGCTTTCTCTTGGTCTTCGCTTGTAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR CCA 90 bp GTGTCTTCCATGGGGGAAGGTGTCAGAATAGCTTCAGGCCTTGGTGTAGCAGTTGCTTCCTGCGGTCGTTaGGCGCCCTTTCTTGTCAGC +
Preference number: 4 (lower is better)
Translates to: VSSMGEGVRIASGLGVAVASCGR*APFLVS
Trigger: GCTGACAAGAAAGGGCGCCCAACGACCGCAGGAAGC...AACTGCTACACCAAGGCCTGAAGCTATTCTGACACCTTCCCCCATGGAAGACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR TCA 90 bp CATTACAAGCGAAGACCAAGAGAAAGCAAGACCATCAGCCCAGCACCCAACTTCGGCTTAGGCTTGGGTTaGGGCTTTGGTCTGCCCCCT +
Preference number: 4 (lower is better)
Translates to: HYKRRPRESKTISPAPNFGLGLG*GFGLPP
Trigger: AGGGGGCAGACCAAAGCCTCAACCCAAGCCTAAGCC...GAAGTTGGGTGCTGGGCTGATGGTCTTGCTTTCTCTTGGTCTTCGCTTGTAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR GCA 90 bp CATTACAAGCGAAGACCAAGAGAAAGCAAGACCATCAGCCCAGCACCCAACTTCCCCTCACCCACAGCATaGATGGTGGCGCACACGTCA +
Preference number: 4 (lower is better)
Translates to: HYKRRPRESKTISPAPNFPSPTA*MVAHTS
Trigger: TGACGTGTGCGCCACCATGCATGCTGTGGGTGAGGG...GAAGTTGGGTGCTGGGCTGATGGTCTTGCTTTCTCTTGGTCTTCGCTTGTAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR GCA 90 bp CCACCAGCAGTCTTAGTGGTCCCGGCTCCCATGGGCTCGGAAGGATGGCCTGCCCCTTTCTTGTCAGCTTaGAGGTTTTCAGGAAATAAA +
Preference number: 4 (lower is better)
Translates to: PPAVLVVPAPMGSEGWPAPFLSA*RFSGNK
Trigger: TTTATTTCCTGAAAACCTGCAAGCTGACAAGAAAGG...GGCAGGCCATCCTTCCGAGCCCATGGGAGCCGGGACCACTAAGACTGCTGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR CCA 90 bp TCAGGCCTTGGTGTAGCAGTTGCTCACTGTCGATCAGAAGAGGAGTCCCCAAAAAGGTCACCGAAGCCTTaGTGGAACTGCACTTGCCGG +
Preference number: 4 (lower is better)
Translates to: SGLGVAVAHCRSEEESPKRSPKP*WNCTCR
Trigger: CCGGCAAGTGCAGTTCCACCAAGGCTTCGGTGACCT...TTTTGGGGACTCCTCTTCTGATCGACAGTGAGCAACTGCTACACCAAGGCCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
3UTR CAA 72 bp TTGGTGACTGTGTCAGCAAAGTCAATCTTCTCCCTCTaGCCTACAAACTGCTGCAGTTCCGGGCGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LVTVSAKSIFSL*PTNCCSSGRSS
Trigger: GGAGGAGCGCCCGGAACTGCAGCAGTTTGTAGGCAAGAGGGAGAAGATTGACTTTGCTGACACAGTCACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
CDS-3UTR GCA 90 bp GAGGGACTGTGCGGGAATGCAGTGACTGTTTCTCTAGGCAAAGAGGAGAGGGCGGAATGTAGTGGGGTGTaGATTTCATCAGGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: EGLCGNAVTVSLGKEERAECSGV*ISSGCS
Trigger: TGAGCACCCTGATGAAATGCACACCCCACTACATTC...CGCCCTCTCCTCTTTGCCTAGAGAAACAGTCACTGCATTCCCGCACAGTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR GCA 90 bp ACATTACAAGCGAAGACCAAGAGAAAGCAAGACCATCAGCCCAGCACCCAACTTAAGCCTTGGTGGAACTaGACTTGCCGGGAGCCCCCT +
Preference number: 4 (lower is better)
Translates to: TLQAKTKRKQDHQPSTQLKPWWN*TCREPP
Trigger: AGGGGGCTCCCGGCAAGTGCAGTTCCACCAAGGCTT...AAGTTGGGTGCTGGGCTGATGGTCTTGCTTTCTCTTGGTCTTCGCTTGTAATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR CCA 90 bp CAAGCGAAGACCAAGAGAAAGCAAGACCATCAGCCCAGCACCCAACTTCTTCCCCTGTGCTTGACATTGTaGCTCTGCCAATGGTACCGG +
Preference number: 4 (lower is better)
Translates to: QAKTKRKQDHQPSTQLLPLCLTL*LCQWYR
Trigger: CCGGTACCATTGGCAGAGCCACAATGTCAAGCACAG...GGGAAGAAGTTGGGTGCTGGGCTGATGGTCTTGCTTTCTCTTGGTCTTCGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034745.9
ENSMUST00000214042.2
CDS-3UTR CCA 90 bp CAAGCGAAGACCAAGAGAAAGCAAGACCATCAGCCCAGCACCCAACTTCTTCCCGCGTGCAGGGTTTCCTaGAAATCCCGCTTGTCATCA +
Preference number: 4 (lower is better)
Translates to: QAKTKRKQDHQPSTQLLPACRVS*KSRLSS
Trigger: TGATGACAAGCGGGATTTCCAGGAAACCCTGCACGC...GGGAAGAAGTTGGGTGCTGGGCTGATGGTCTTGCTTTCTCTTGGTCTTCGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR CCA 90 bp GGGGGAAGGTGTCAGAATAGCTTCAGGCCTTGGTGTAGCAGTTGCTCACTGTCGTTACTTCTCCCAAGCTaGAACTGGTCGCTGTCCATG +
Preference number: 4 (lower is better)
Translates to: GGRCQNSFRPWCSSCSLSLLLPS*NWSLSM
Trigger: CATGGACAGCGACCAGTTCCAGCTTGGGAGAAGTAA...CGACAGTGAGCAACTGCTACACCAAGGCCTGAAGCTATTCTGACACCTTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR CCA 90 bp GAGGGACTGTGCGGGAATGCAGTGACTGTTTCTCTAGGCAAAGAGGAGAGGGCGTTAAGTACAAGCACTTaGGGGTTAGCAGCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: EGLCGNAVTVSLGKEERALSTST*GLAAGL
Trigger: GAGACCTGCTGCTAACCCCCAAGTGCTTGTACTTAA...CGCCCTCTCCTCTTTGCCTAGAGAAACAGTCACTGCATTCCCGCACAGTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR CCA 90 bp GGGGGAAGGTGTCAGAATAGCTTCAGGCCTTGGTGTAGCAGTTGCTCACTGTCGCACAACACCTTTGTCTaGGCCTTGCTTCACCTTCTC +
Preference number: 4 (lower is better)
Translates to: GGRCQNSFRPWCSSCSLSHNTFV*ALLHLL
Trigger: GAGAAGGTGAAGCAAGGCCCAGACAAAGGTGTTGTG...CGACAGTGAGCAACTGCTACACCAAGGCCTGAAGCTATTCTGACACCTTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR TCA 90 bp ACATTACAAGCGAAGACCAAGAGAAAGCAAGACCATCAGCCCAGCACCCAACTTAGGCCTGCTCCACGTTaGGGGTCACATGGATGGACT +
Preference number: 4 (lower is better)
Translates to: TLQAKTKRKQDHQPSTQLRPAPR*GSHGWT
Trigger: AGTCCATCCATGTGACCCTCAACGTGGAGCAGGCCT...AAGTTGGGTGCTGGGCTGATGGTCTTGCTTTCTCTTGGTCTTCGCTTGTAATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR TCA 90 bp ACAAGCGAAGACCAAGAGAAAGCAAGACCATCAGCCCAGCACCCAACTTCTTCCGGTCGCTGTCCATGTTaGCAGACTGCAGTAGATGGA +
Preference number: 4 (lower is better)
Translates to: TSEDQEKARPSAQHPTSSGRCPC*QTAVDG
Trigger: TCCATCTACTGCAGTCTGTCAACATGGACAGCGACC...GGAAGAAGTTGGGTGCTGGGCTGATGGTCTTGCTTTCTCTTGGTCTTCGCTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR CCA 90 bp CCTGGTGAGTGGGCAGGAGGCTGTGGGATAGACACCAAGCAGTCCCCGCTACTTCCACCTGGACTGAACTaGATTTCAAAGTATTTTCCA +
Preference number: 4 (lower is better)
Translates to: PGEWAGGCGIDTKQSPLLPPGLN*ISKYFP
Trigger: TGGAAAATACTTTGAAATCCAGTTCAGTCCAGGTGG...AAGTAGCGGGGACTGCTTGGTGTCTATCCCACAGCCTCCTGCCCACTCACCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR CCA 90 bp ACAAGCGAAGACCAAGAGAAAGCAAGACCATCAGCCCAGCACCCAACTTCTTCCGATCTTGCCACCATCTaGTTCCCCACCTGGACTGAA +
Preference number: 4 (lower is better)
Translates to: TSEDQEKARPSAQHPTSSDLATI*FPTWTE
Trigger: TTCAGTCCAGGTGGGGAACCAGATGGTGGCAAGATC...GGAAGAAGTTGGGTGCTGGGCTGATGGTCTTGCTTTCTCTTGGTCTTCGCTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR CCA 90 bp TCAGGCCTTGGTGTAGCAGTTGCTCACTGTCGATCAGAAGAGGAGTCCCCAAAAGCTTTGCTTCTGCTCTaGAGAGGCACCCTCAATGAG +
Preference number: 4 (lower is better)
Translates to: SGLGVAVAHCRSEEESPKALLLL*RGTLNE
Trigger: CTCATTGAGGGTGCCTCTCCAGAGCAGAAGCAAAGC...TTTTGGGGACTCCTCTTCTGATCGACAGTGAGCAACTGCTACACCAAGGCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR CCA 90 bp GGACTGTGCGGGAATGCAGTGACTGTTTCTCTAGGCAAAGAGGAGAGGGCGCGTATGTTGTACTCCTCGTaGTCCTTCTCCATGGCTTTA +
Preference number: 4 (lower is better)
Translates to: GLCGNAVTVSLGKEERARMLYSS*SFSMAL
Trigger: TAAAGCCATGGAGAAGGACCACGAGGAGTACAACAT...ACGCGCCCTCTCCTCTTTGCCTAGAGAAACAGTCACTGCATTCCCGCACAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR CCA 90 bp CATTACAAGCGAAGACCAAGAGAAAGCAAGACCATCAGCCCAGCACCCAACTTCACTCCAGCAACACCCTaGTCCGGGACCTTGAGGAAA +
Preference number: 4 (lower is better)
Translates to: HYKRRPRESKTISPAPNFTPATP*SGTLRK
Trigger: TTTCCTCAAGGTCCCGGACCAGGGTGTTGCTGGAGT...GAAGTTGGGTGCTGGGCTGATGGTCTTGCTTTCTCTTGGTCTTCGCTTGTAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR TCA 90 bp CCTACCTTCATGAATGGGTACAGTGGAATACTACCTGCTGCATTCATATGTGCTCCTGGTCCGGGACCTTaGGGAAATCCAGGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: PTFMNGYSGILPAAFICAPGPGP*GNPGSL
Trigger: CAGAGAGCCTGGATTTCCTCAAGGTCCCGGACCAGG...AGCACATATGAATGCAGCAGGTAGTATTCCACTGTACCCATTCATGAAGGTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
3UTR CAA 72 bp GTAGTAATAGTAGTCCATGCTGGTGATGCCAAGGCTTaGCTTCTGCTCTGGAGAGGCACCCTCAATGAGCTG +
Preference number: 4 (lower is better)
Translates to: VVIVVHAGDAKA*LLLWRGTLNEL
Trigger: CAGCTCATTGAGGGTGCCTCTCCAGAGCAGAAGCAAAGCCTTGGCATCACCAGCATGGACTACTATTACTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR CAA 72 bp AGGTCTCGCTTGACACCCTTGAACCTCCTGTCGTACTaGGTGACTGTGTCAGCAAAGTCAATCTTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: RSRLTPLNLLSY*VTVSAKSIFSL
Trigger: GAGGGAGAAGATTGACTTTGCTGACACAGTCACCAAGTACGACAGGAGGTTCAAGGGTGTCAAGCGAGACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR CAA 72 bp TGCTTCACCTTCTCCCTTCCAATTAAGTACAAGCACTaGGGGGTTAGCAGCAGGTCTCGCTTGACACCCTTG +
Preference number: 4 (lower is better)
Translates to: CFTFSLPIKYKH*GVSSRSRLTPL
Trigger: CAAGGGTGTCAAGCGAGACCTGCTGCTAACCCCCAAGTGCTTGTACTTAATTGGAAGGGAGAAGGTGAAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR CAA 72 bp TCGATCCTCCGCTTCAGGACTTCCTTCACAACACCTTaGTCTGGGCCTTGCTTCACCTTCTCCCTTCCAATT +
Preference number: 4 (lower is better)
Translates to: SILRFRTSFTTP*SGPCFTFSLPI
Trigger: AATTGGAAGGGAGAAGGTGAAGCAAGGCCCAGACAAAGGTGTTGTGAAGGAAGTCCTGAAGCGGAGGATCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
CDS-3UTR TCA 90 bp GGAATGAGTGAGATGTGCTCTTCAACTAAAGGCACTTGTCATCGAGTCACCGCCGTTCAATCAGGTCCATaGAAAGCACATCCCGGTTCC +
Preference number: 4 (lower is better)
Translates to: GMSEMCSSTKGTCHRVTAVQSGP*KAHPGS
Trigger: GGAACCGGGATGTGCTTTTCATGGACCTGATTGAAC...GGCGGTGACTCGATGACAAGTGCCTTTAGTTGAAGAGCACATCTCACTCATTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR TCA 90 bp GTGTCTTCCATGGGGGAAGGTGTCAGAATAGCTTCAGGCCTTGGTGTAGCAGTTGTTCAACAGCAGGTCTaGGGCTTCTTCTCTCATTTG +
Preference number: 4 (lower is better)
Translates to: VSSMGEGVRIASGLGVAVVQQQV*GFFSHL
Trigger: CAAATGAGAGAAGAAGCCTCAGACCTGCTGTTGAAC...AACTGCTACACCAAGGCCTGAAGCTATTCTGACACCTTCCCCCATGGAAGACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR TCA 90 bp GTGTCTTCCATGGGGGAAGGTGTCAGAATAGCTTCAGGCCTTGGTGTAGCAGTTGTGTACAGGCTTTTCTaGTTGGACCTCTGGTTTCCA +
Preference number: 4 (lower is better)
Translates to: VSSMGEGVRIASGLGVAVVYRLF*LDLWFP
Trigger: TGGAAACCAGAGGTCCAATCAGAAAAGCCTGTACAC...AACTGCTACACCAAGGCCTGAAGCTATTCTGACACCTTCCCCCATGGAAGACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR GCA 90 bp ATTTCTTGCGGGCCACGAACTTCCTCCATGTTTTCTGTATCACACGTGCGTAACTCGTCCACACCACTGTaGTTGACATTGTGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: ISCGPRTSSMFSVSHVRNSSTPL*LTLWLC
Trigger: GCAGAGCCACAATGTCAAGCACAGTGGTGTGGACGA...GTTACGCACGTGTGATACAGAAAACATGGAGGAAGTTCGTGGCCCGCAAGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
CDS-3UTR CCA 90 bp AAGATTCCAATCACATTCATGGCGTGCAGGGTTTCCTGGAAATCCCGCTTGTCACTGTGCTTGACATTGTaGCTCTGCCAATGGTACCGG +
Preference number: 4 (lower is better)
Translates to: KIPITFMACRVSWKSRLSLCLTL*LCQWYR
Trigger: CCGGTACCATTGGCAGAGCCACAATGTCAAGCACAG...TGACAAGCGGGATTTCCAGGAAACCCTGCACGCCATGAATGTGATTGGAATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
CDS-3UTR CCA 90 bp GTGTCTTCCATGGGGGAAGGTGTCAGAATAGCTTCAGGCCTTGGTGTAGCAGTTTCCGCATCACCACTCTaGACTTTTCCAGAAGGAAGT +
Preference number: 4 (lower is better)
Translates to: VSSMGEGVRIASGLGVAVSASPL*TFPEGS
Trigger: ACTTCCTTCTGGAAAAGTCCAGAGTGGTGATGCGGA...AACTGCTACACCAAGGCCTGAAGCTATTCTGACACCTTCCCCCATGGAAGACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR CCA 90 bp TGTCAGAATAGCTTCAGGCCTTGGTGTAGCAGTTGCTCACTGTCGATCAGAAGACTCCCAAGCTGGAACTaGTCGCTGTCCATGTTGACA +
Preference number: 4 (lower is better)
Translates to: CQNSFRPWCSSCSLSIRRLPSWN*SLSMLT
Trigger: TGTCAACATGGACAGCGACCAGTTCCAGCTTGGGAG...TCTTCTGATCGACAGTGAGCAACTGCTACACCAAGGCCTGAAGCTATTCTGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR CCA 90 bp GGACTGTGCGGGAATGCAGTGACTGTTTCTCTAGGCAAAGAGGAGAGGGCGCGTAAGAAACAGAGACTCTaGGGCTTTGATGAACACTTT +
Preference number: 4 (lower is better)
Translates to: GLCGNAVTVSLGKEERARKKQRL*GFDEHF
Trigger: AAAGTGTTCATCAAAGCCCCAGAGTCTCTGTTTCTT...ACGCGCCCTCTCCTCTTTGCCTAGAGAAACAGTCACTGCATTCCCGCACAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR CCA 90 bp GAGGGACTGTGCGGGAATGCAGTGACTGTTTCTCTAGGCAAAGAGGAGAGGGCGTCATATTCTTGCTCGTaGAGAATGAAGATGTCATCC +
Preference number: 4 (lower is better)
Translates to: EGLCGNAVTVSLGKEERASYSCS*RMKMSS
Trigger: GGATGACATCTTCATTCTCCACGAGCAAGAATATGA...CGCCCTCTCCTCTTTGCCTAGAGAAACAGTCACTGCATTCCCGCACAGTCCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR CCA 90 bp TCAGGCCTTGGTGTAGCAGTTGCTCACTGTCGATCAGAAGAGGAGTCCCCAAAAGGAGGAGGCACAAACTaGTTTCGTATGACTCCGTTT +
Preference number: 4 (lower is better)
Translates to: SGLGVAVAHCRSEEESPKGGGTN*FRMTPF
Trigger: AAACGGAGTCATACGAAACCAGTTTGTGCCTCCTCC...TTTTGGGGACTCCTCTTCTGATCGACAGTGAGCAACTGCTACACCAAGGCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
3UTR CAA 72 bp CACTCGGATGTTTTCTTTGAGACCCAGGTACTCCACTaGATGCTTCACTCTGCTCTCCTCCCAGTCTTTAGG +
Preference number: 4 (lower is better)
Translates to: HSDVFFETQVLH*MLHSALLPVFR
Trigger: CCTAAAGACTGGGAGGAGAGCAGAGTGAAGCATCAAGTGGAGTACCTGGGTCTCAAAGAAAACATCCGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR CAA 72 bp TTACTTCTCCCAAGCTGGAACTGGTCGCTGTCCATGTaGACAGACTGCAGTAGATGGAGGACACCTTGTTTC +
Preference number: 4 (lower is better)
Translates to: LLLPSWNWSLSM*TDCSRWRTPCF
Trigger: GAAACAAGGTGTCCTCCATCTACTGCAGTCTGTCAACATGGACAGCGACCAGTTCCAGCTTGGGAGAAGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
CDS-3UTR TCA 90 bp ACATTACAAGCGAAGACCAAGAGAAAGCAAGACCATCAGCCCAGCACCCAACTTAGGAGCGGGTTGGATTaGAGGATGATGTCCTTCACA +
Preference number: 4 (lower is better)
Translates to: TLQAKTKRKQDHQPSTQLRSGLD*RMMSFT
Trigger: TGTGAAGGACATCATCCTTCAATCCAACCCGCTCCT...AAGTTGGGTGCTGGGCTGATGGTCTTGCTTTCTCTTGGTCTTCGCTTGTAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR TCA 90 bp CCTACCTTCATGAATGGGTACAGTGGAATACTACCTGCTGCATTCATATGTGCTCTTGGTTCCAGCTGTTaGAGTGCTCATGGCTCCCGA +
Preference number: 4 (lower is better)
Translates to: PTFMNGYSGILPAAFICALGSSC*SAHGSR
Trigger: TCGGGAGCCATGAGCACTTCAACAGCTGGAACCAAG...AGCACATATGAATGCAGCAGGTAGTATTCCACTGTACCCATTCATGAAGGTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR GCA 90 bp TACAAGCGAAGACCAAGAGAAAGCAAGACCATCAGCCCAGCACCCAACTTCTTCATCACATTCATGGCGTaGAGGGTTTCCTGGAAATCC +
Preference number: 4 (lower is better)
Translates to: YKRRPRESKTISPAPNFFITFMA*RVSWKS
Trigger: GGATTTCCAGGAAACCCTGCACGCCATGAATGTGAT...GAAGAAGTTGGGTGCTGGGCTGATGGTCTTGCTTTCTCTTGGTCTTCGCTTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR GCA 90 bp CCTACCTTCATGAATGGGTACAGTGGAATACTACCTGCTGCATTCATATGTGCTGAAATCAAAGACTCGTaGGTGCAGGGCCTTGGCGAG +
Preference number: 4 (lower is better)
Translates to: PTFMNGYSGILPAAFICAEIKDS*VQGLGE
Trigger: CTCGCCAAGGCCCTGCACGCACGAGTCTTTGATTTC...AGCACATATGAATGCAGCAGGTAGTATTCCACTGTACCCATTCATGAAGGTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR GCA 90 bp GGACTGTGCGGGAATGCAGTGACTGTTTCTCTAGGCAAAGAGGAGAGGGCGCGTAAACTGTCATATTCTTaGTCGTGGAGAATGAAGATG +
Preference number: 4 (lower is better)
Translates to: GLCGNAVTVSLGKEERARKLSYS*SWRMKM
Trigger: CATCTTCATTCTCCACGAGCAAGAATATGACAGTTT...ACGCGCCCTCTCCTCTTTGCCTAGAGAAACAGTCACTGCATTCCCGCACAGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR GCA 90 bp TACCTTCATGAATGGGTACAGTGGAATACTACCTGCTGCATTCATATGTGCTTCGGTCCGATGCTGACCTaGAGCACTTTGTTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: YLHEWVQWNTTCCIHMCFGPMLT*STLLLG
Trigger: GCCCAGCAACAAAGTGCTGCAGGTCAGCATCGGACC...GAAGCACATATGAATGCAGCAGGTAGTATTCCACTGTACCCATTCATGAAGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR TCA 90 bp GGAATGAGTGAGATGTGCTCTTCAACTAAAGGCACTTGTCATCGAGTCACCGCCCATCTTATTCCCTCCTaGACGTATTCTTCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: GMSEMCSSTKGTCHRVTAHLIPS*TYSSCS
Trigger: AGAGCAGGAAGAATACGTTCAGGAGGGAATAAGATG...GGCGGTGACTCGATGACAAGTGCCTTTAGTTGAAGAGCACATCTCACTCATTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR GCA 90 bp TACAAGCGAAGACCAAGAGAAAGCAAGACCATCAGCCCAGCACCCAACTTCTTCCTTGTTTCTTTATTTTaGTTCCTGCGGTCGTTGGGC +
Preference number: 4 (lower is better)
Translates to: YKRRPRESKTISPAPNFFLVSLF*FLRSLG
Trigger: GCCCAACGACCGCAGGAAGCAAAATAAAGAAACAAG...GAAGAAGTTGGGTGCTGGGCTGATGGTCTTGCTTTCTCTTGGTCTTCGCTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR CCA 90 bp GGGATAGACACCAAGCAGTCCCCGCTACTTACACCAGATTTAAATACAATAAATTCACCGAAGCCTTGGTaGAACTGCACTTGCCGGGAG +
Preference number: 4 (lower is better)
Translates to: GIDTKQSPLLTPDLNTINSPKPW*NCTCRE
Trigger: CTCCCGGCAAGTGCAGTTCCACCAAGGCTTCGGTGA...ATTTATTGTATTTAAATCTGGTGTAAGTAGCGGGGACTGCTTGGTGTCTATCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR TCA 90 bp TACAAGCGAAGACCAAGAGAAAGCAAGACCATCAGCCCAGCACCCAACTTCTTCGGTTCTCTCTGTCGATaGTCATGTTTCTGTACATAC +
Preference number: 4 (lower is better)
Translates to: YKRRPRESKTISPAPNFFGSLCR*SCFCTY
Trigger: GTATGTACAGAAACATGATCATCGACAGAGAGAACC...GAAGAAGTTGGGTGCTGGGCTGATGGTCTTGCTTTCTCTTGGTCTTCGCTTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034745.9
ENSMUST00000214042.2
CDS-3UTR TCA 90 bp CATTACAAGCGAAGACCAAGAGAAAGCAAGACCATCAGCCCAGCACCCAACTTCGGTTCTCTCTGTCGATaGTCATGTTTCTGTACATAC +
Preference number: 4 (lower is better)
Translates to: HYKRRPRESKTISPAPNFGSLCR*SCFCTY
Trigger: GTATGTACAGAAACATGATCATCGACAGAGAGAACC...GAAGTTGGGTGCTGGGCTGATGGTCTTGCTTTCTCTTGGTCTTCGCTTGTAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034745.9
ENSMUST00000214042.2
CDS-3UTR GCA 90 bp TACCTTCATGAATGGGTACAGTGGAATACTACCTGCTGCATTCATATGTGCTTCCCTTTGTCTGGGCCTTaGTTCACCTTCTCCCTTCCA +
Preference number: 4 (lower is better)
Translates to: YLHEWVQWNTTCCIHMCFPLSGP*FTFSLP
Trigger: TGGAAGGGAGAAGGTGAAGCAAGGCCCAGACAAAGG...GAAGCACATATGAATGCAGCAGGTAGTATTCCACTGTACCCATTCATGAAGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR TCA 90 bp TACCTTCATGAATGGGTACAGTGGAATACTACCTGCTGCATTCATATGTGCTTCCACATGGATGGACTCTaGCTTTCCTCCCCACTTACT +
Preference number: 4 (lower is better)
Translates to: YLHEWVQWNTTCCIHMCFHMDGL*LSSPLT
Trigger: AGTAAGTGGGGAGGAAAGTCAGAGTCCATCCATGTG...GAAGCACATATGAATGCAGCAGGTAGTATTCCACTGTACCCATTCATGAAGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR TCA 90 bp TGTCAGAATAGCTTCAGGCCTTGGTGTAGCAGTTGCTCACTGTCGATCAGAAGAGTTCAAGGGTATTGCTaGATTTCAGAGGTAGTTGCT +
Preference number: 4 (lower is better)
Translates to: CQNSFRPWCSSCSLSIRRVQGYC*ISEVVA
Trigger: AGCAACTACCTCTGAAATTCAGCAATACCCTTGAAC...TCTTCTGATCGACAGTGAGCAACTGCTACACCAAGGCCTGAAGCTATTCTGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR CCA 90 bp GGGATAGACACCAAGCAGTCCCCGCTACTTACACCAGATTTAAATACAATAAATCTGTTGAAGTGCTCATaGCTCCCGATCTGCATCTGG +
Preference number: 4 (lower is better)
Translates to: GIDTKQSPLLTPDLNTINLLKCS*LPICIW
Trigger: CCAGATGCAGATCGGGAGCCATGAGCACTTCAACAG...ATTTATTGTATTTAAATCTGGTGTAAGTAGCGGGGACTGCTTGGTGTCTATCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR GCA 90 bp TACCTTCATGAATGGGTACAGTGGAATACTACCTGCTGCATTCATATGTGCTTCATGAAGATGTCATCCTaGATGGTACTGAGGGACACG +
Preference number: 4 (lower is better)
Translates to: YLHEWVQWNTTCCIHMCFMKMSS*MVLRDT
Trigger: CGTGTCCCTCAGTACCATGCAGGATGACATCTTCAT...GAAGCACATATGAATGCAGCAGGTAGTATTCCACTGTACCCATTCATGAAGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
3UTR CAA 72 bp TTTATTTTGCTTCCTGCGGTCGTTGGGCGCCCTTTCTaGTCAGCTTGCAGGTTTTCAGGAAATAAAGACTTT +
Preference number: 4 (lower is better)
Translates to: FILLPAVVGRPF*SACRFSGNKDF
Trigger: AAAGTCTTTATTTCCTGAAAACCTGCAAGCTGACAAGAAAGGGCGCCCAACGACCGCAGGAAGCAAAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
3UTR CAA 72 bp CTACCTTTTAGGATCATTTGTGGAGTGACCCATAACTaGTCCTTGTCCCTAACCCAAGCTTTTCTGTGTCTT +
Preference number: 4 (lower is better)
Translates to: LPFRIICGVTHN*SLSLTQAFLCL
Trigger: AAGACACAGAAAAGCTTGGGTTAGGGACAAGGACAAGTTATGGGTCACTCCACAAATGATCCTAAAAGGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034745.9
ENSMUST00000214042.2
CDS-3UTR CAA 90 bp ACCAGCAGTCTTAGTGGTCCCGGCTCCCATGGGCTCGGAAGGATGGCCTGCCCGCGTGCGTGCAGGGCCTaGGCGAGCGCGTCCCTGGTG +
Preference number: 5 (lower is better)
Translates to: TSSLSGPGSHGLGRMACPRACRA*ASASLV
Trigger: CACCAGGGACGCGCTCGCCAAGGCCCTGCACGCACG...CGGGCAGGCCATCCTTCCGAGCCCATGGGAGCCGGGACCACTAAGACTGCTGGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR CAA 90 bp ACCAGCAGTCTTAGTGGTCCCGGCTCCCATGGGCTCGGAAGGATGGCCTGCCCGCAGGTCACCGAAGCCTaGGTGGAACTGCACTTGCCG +
Preference number: 5 (lower is better)
Translates to: TSSLSGPGSHGLGRMACPQVTEA*VELHLP
Trigger: CGGCAAGTGCAGTTCCACCAAGGCTTCGGTGACCTG...CGGGCAGGCCATCCTTCCGAGCCCATGGGAGCCGGGACCACTAAGACTGCTGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR CAA 90 bp ACCAGCAGTCTTAGTGGTCCCGGCTCCCATGGGCTCGGAAGGATGGCCTGCCCGCCCTGGTCCGGGACCTaGAGGAAATCCAGGCTCTCT +
Preference number: 5 (lower is better)
Translates to: TSSLSGPGSHGLGRMACPPWSGT*RKSRLS
Trigger: AGAGAGCCTGGATTTCCTCAAGGTCCCGGACCAGGG...CGGGCAGGCCATCCTTCCGAGCCCATGGGAGCCGGGACCACTAAGACTGCTGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR CAA 90 bp CCACCAGCAGTCTTAGTGGTCCCGGCTCCCATGGGCTCGGAAGGATGGCCTGCCACAGGCCAGGTAGCTTaGGTCAGAATGGCATACCTC +
Preference number: 5 (lower is better)
Translates to: PPAVLVVPAPMGSEGWPATGQVA*VRMAYL
Trigger: GAGGTATGCCATTCTGACCAAAGCTACCTGGCCTGT...GGCAGGCCATCCTTCCGAGCCCATGGGAGCCGGGACCACTAAGACTGCTGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR CAA 90 bp GAGTGGGCAGGAGGCTGTGGGATAGACACCAAGCAGTCCCCGCTACTTACACCATTGGTGGAACTGCACTaGCCGGGAGCCCCCTGCACT +
Preference number: 5 (lower is better)
Translates to: EWAGGCGIDTKQSPLLTPLVELH*PGAPCT
Trigger: AGTGCAGGGGGCTCCCGGCAAGTGCAGTTCCACCAA...TGGTGTAAGTAGCGGGGACTGCTTGGTGTCTATCCCACAGCCTCCTGCCCACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR CAA 90 bp GGTGAGTGGGCAGGAGGCTGTGGGATAGACACCAAGCAGTCCCCGCTACTTACATTCACATGCTGGACCTaGGGGCCTCCTCCAGACACT +
Preference number: 5 (lower is better)
Translates to: GEWAGGCGIDTKQSPLLTFTCWT*GPPPDT
Trigger: AGTGTCTGGAGGAGGCCCCAAGGTCCAGCATGTGAA...TGTAAGTAGCGGGGACTGCTTGGTGTCTATCCCACAGCCTCCTGCCCACTCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR CAA 90 bp GAGGGACTGTGCGGGAATGCAGTGACTGTTTCTCTAGGCAAAGAGGAGAGGGCGCCTTGGTTCCAGCTGTaGAAGTGCTCATGGCTCCCG +
Preference number: 5 (lower is better)
Translates to: EGLCGNAVTVSLGKEERAPWFQL*KCSWLP
Trigger: CGGGAGCCATGAGCACTTCAACAGCTGGAACCAAGG...CGCCCTCTCCTCTTTGCCTAGAGAAACAGTCACTGCATTCCCGCACAGTCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR CAA 90 bp CCACCAGCAGTCTTAGTGGTCCCGGCTCCCATGGGCTCGGAAGGATGGCCTGCCAGAGACTCTGGGGCTTaGATGAACACTTTACTTCTC +
Preference number: 5 (lower is better)
Translates to: PPAVLVVPAPMGSEGWPARDSGA*MNTLLL
Trigger: GAGAAGTAAAGTGTTCATCAAAGCCCCAGAGTCTCT...GGCAGGCCATCCTTCCGAGCCCATGGGAGCCGGGACCACTAAGACTGCTGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR CAA 90 bp CACAGGAGAATTTCCTACAGGGAGAGGGTAAGGGGGTCTGAGGGACTGTGCGGGACCTTTGTCTGGGCCTaGCTTCACCTTCTCCCTTCC +
Preference number: 5 (lower is better)
Translates to: HRRISYRERVRGSEGLCGTFVWA*LHLLPS
Trigger: GGAAGGGAGAAGGTGAAGCAAGGCCCAGACAAAGGT...CCCGCACAGTCCCTCAGACCCCCTTACCCTCTCCCTGTAGGAAATTCTCCTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR CAA 90 bp CACAGGAGAATTTCCTACAGGGAGAGGGTAAGGGGGTCTGAGGGACTGTGCGGGCCACTGTGCTTGACATaGTGGCTCTGCCAATGGTAC +
Preference number: 5 (lower is better)
Translates to: HRRISYRERVRGSEGLCGPLCLT*WLCQWY
Trigger: GTACCATTGGCAGAGCCACAATGTCAAGCACAGTGG...CCCGCACAGTCCCTCAGACCCCCTTACCCTCTCCCTGTAGGAAATTCTCCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034745.9
ENSMUST00000214042.2
CDS-3UTR CAA 90 bp GGTGAGTGGGCAGGAGGCTGTGGGATAGACACCAAGCAGTCCCCGCTACTTACACCAGGAGGGTTGACTTaGCTCTCTATGAGGTCACAC +
Preference number: 5 (lower is better)
Translates to: GEWAGGCGIDTKQSPLLTPGGLT*LSMRSH
Trigger: GTGTGACCTCATAGAGAGCAAAGTCAACCCTCCTGG...TGTAAGTAGCGGGGACTGCTTGGTGTCTATCCCACAGCCTCCTGCCCACTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR CAA 90 bp ATCTGCATCTGGAGCTTCTGTAGCAGAGTCTGGTCAGCCCCCTCACCCACAGCACCACTGTGCTTGACATaGTGGCTCTGCCAATGGTAC +
Preference number: 5 (lower is better)
Translates to: ICIWSFCSRVWSAPSPTAPLCLT*WLCQWY
Trigger: GTACCATTGGCAGAGCCACAATGTCAAGCACAGTGG...TGCTGTGGGTGAGGGGGCTGACCAGACTCTGCTACAGAAGCTCCAGATGCAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
CDS-3UTR CAA 90 bp GTGTCTTCCATGGGGGAAGGTGTCAGAATAGCTTCAGGCCTTGGTGTAGCAGTTTGCTTCCTGCGGTCGTaGGGCGCCCTTTCTTGTCAG +
Preference number: 5 (lower is better)
Translates to: VSSMGEGVRIASGLGVAVCFLRS*GALSCQ
Trigger: CTGACAAGAAAGGGCGCCCAACGACCGCAGGAAGCA...AACTGCTACACCAAGGCCTGAAGCTATTCTGACACCTTCCCCCATGGAAGACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR CAA 90 bp GGGGGAAGGTGTCAGAATAGCTTCAGGCCTTGGTGTAGCAGTTGCTCACTGTCGACCTGCAGCACTTTGTaGCTGGGCTTGAGGATAGCC +
Preference number: 5 (lower is better)
Translates to: GGRCQNSFRPWCSSCSLSTCSTL*LGLRIA
Trigger: GGCTATCCTCAAGCCCAGCAACAAAGTGCTGCAGGT...CGACAGTGAGCAACTGCTACACCAAGGCCTGAAGCTATTCTGACACCTTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR CAA 90 bp CTTCTTCCCACCAGCAGTCTTAGTGGTCCCGGCTCCCATGGGCTCGGAAGGATGATAATATCGTTGGCGTaGAAGCTGAGTTCGTCCGTG +
Preference number: 5 (lower is better)
Translates to: LLPTSSLSGPGSHGLGRMIISLA*KLSSSV
Trigger: CACGGACGAACTCAGCTTCAACGCCAACGATATTAT...CATCCTTCCGAGCCCATGGGAGCCGGGACCACTAAGACTGCTGGTGGGAAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR CAA 90 bp CCACCAGCAGTCTTAGTGGTCCCGGCTCCCATGGGCTCGGAAGGATGGCCTGCCATATCAATAATATCGTaGGCGTTGAAGCTGAGTTCG +
Preference number: 5 (lower is better)
Translates to: PPAVLVVPAPMGSEGWPAISIIS*ALKLSS
Trigger: CGAACTCAGCTTCAACGCCAACGATATTATTGATAT...GGCAGGCCATCCTTCCGAGCCCATGGGAGCCGGGACCACTAAGACTGCTGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR CAA 90 bp TACAAGCGAAGACCAAGAGAAAGCAAGACCATCAGCCCAGCACCCAACTTCTTCAGGCTTAGGCTTGGGTaGAGGCTTTGGTCTGCCCCC +
Preference number: 5 (lower is better)
Translates to: YKRRPRESKTISPAPNFFRLRLG*RLWSAP
Trigger: GGGGGCAGACCAAAGCCTCAACCCAAGCCTAAGCCT...GAAGAAGTTGGGTGCTGGGCTGATGGTCTTGCTTTCTCTTGGTCTTCGCTTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR CAA 90 bp TACAAGCGAAGACCAAGAGAAAGCAAGACCATCAGCCCAGCACCCAACTTCTTCGGAAACAGGCCCTGCTaGCCTCGTAGTCTACCCGTC +
Preference number: 5 (lower is better)
Translates to: YKRRPRESKTISPAPNFFGNRPC*PRSLPV
Trigger: GACGGGTAGACTACGAGGCAAGCAGGGCCTGTTTCC...GAAGAAGTTGGGTGCTGGGCTGATGGTCTTGCTTTCTCTTGGTCTTCGCTTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR CAA 90 bp GGGGGAAGGTGTCAGAATAGCTTCAGGCCTTGGTGTAGCAGTTGCTCACTGTCGGAGCTCTCTGTGATCTaGGACAGTAGAACCATGTCG +
Preference number: 5 (lower is better)
Translates to: GGRCQNSFRPWCSSCSLSELSVI*DSRTMS
Trigger: CGACATGGTTCTACTGTCCAAGATCACAGAGAGCTC...CGACAGTGAGCAACTGCTACACCAAGGCCTGAAGCTATTCTGACACCTTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034745.9
ENSMUST00000214042.2
CDS-3UTR CAA 90 bp TCAGGCCTTGGTGTAGCAGTTGCTCACTGTCGATCAGAAGAGGAGTCCCCAAAATCGTATGACTCCGTTTaGATGGCATCCTGGGGGAGC +
Preference number: 5 (lower is better)
Translates to: SGLGVAVAHCRSEEESPKSYDSV*MASWGS
Trigger: GCTCCCCCAGGATGCCATCAAAACGGAGTCATACGA...TTTTGGGGACTCCTCTTCTGATCGACAGTGAGCAACTGCTACACCAAGGCCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR CAA 90 bp TACCTTCATGAATGGGTACAGTGGAATACTACCTGCTGCATTCATATGTGCTTCCGGTGGACTGTTGCCTaGGCAAGGGTGGGCGGGCCA +
Preference number: 5 (lower is better)
Translates to: YLHEWVQWNTTCCIHMCFRWTVA*ARVGGP
Trigger: TGGCCCGCCCACCCTTGCCAAGGCAACAGTCCACCG...GAAGCACATATGAATGCAGCAGGTAGTATTCCACTGTACCCATTCATGAAGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR CAA 90 bp AAGTACAAGCACTTGGGGGTTAGCAGCAGGTCTCGCTTGACACCCTTGAACCTCGAGCTCTCTGTGATCTaGGACAGTAGAACCATGTCG +
Preference number: 5 (lower is better)
Translates to: KYKHLGVSSRSRLTPLNLELSVI*DSRTMS
Trigger: CGACATGGTTCTACTGTCCAAGATCACAGAGAGCTC...GAGGTTCAAGGGTGTCAAGCGAGACCTGCTGCTAACCCCCAAGTGCTTGTACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
CDS-3UTR CAA 90 bp GTGTCTTCCATGGGGGAAGGTGTCAGAATAGCTTCAGGCCTTGGTGTAGCAGTTCAGGAGCGGGTTGGATaGAAGGATGATGTCCTTCAC +
Preference number: 5 (lower is better)
Translates to: VSSMGEGVRIASGLGVAVQERVG*KDDVLH
Trigger: GTGAAGGACATCATCCTTCAATCCAACCCGCTCCTG...AACTGCTACACCAAGGCCTGAAGCTATTCTGACACCTTCCCCCATGGAAGACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR CAA 90 bp ACATTACAAGCGAAGACCAAGAGAAAGCAAGACCATCAGCCCAGCACCCAACTTGGTGATGCCAAGGCTTaGCTTCTGCTCTGGAGAGGC +
Preference number: 5 (lower is better)
Translates to: TLQAKTKRKQDHQPSTQLGDAKA*LLLWRG
Trigger: GCCTCTCCAGAGCAGAAGCAAAGCCTTGGCATCACC...AAGTTGGGTGCTGGGCTGATGGTCTTGCTTTCTCTTGGTCTTCGCTTGTAATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR CAA 90 bp GTGTCTTCCATGGGGGAAGGTGTCAGAATAGCTTCAGGCCTTGGTGTAGCAGTTGTTGGGCGCCCTTTCTaGTCAGCTTGCAGGTTTTCA +
Preference number: 5 (lower is better)
Translates to: VSSMGEGVRIASGLGVAVVGRPF*SACRFS
Trigger: TGAAAACCTGCAAGCTGACAAGAAAGGGCGCCCAAC...AACTGCTACACCAAGGCCTGAAGCTATTCTGACACCTTCCCCCATGGAAGACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR CAA 90 bp GGACTGTGCGGGAATGCAGTGACTGTTTCTCTAGGCAAAGAGGAGAGGGCGCGTGTGCTCACCAGGTCGTaGGCTTGTTTCTTTATTTTG +
Preference number: 5 (lower is better)
Translates to: GLCGNAVTVSLGKEERARVLTRS*ACFFIL
Trigger: CAAAATAAAGAAACAAGCCAACGACCTGGTGAGCAC...ACGCGCCCTCTCCTCTTTGCCTAGAGAAACAGTCACTGCATTCCCGCACAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR CAA 90 bp GTGTCTTCCATGGGGGAAGGTGTCAGAATAGCTTCAGGCCTTGGTGTAGCAGTTACCCAGGTACTCCACTaGATGCTTCACTCTGCTCTC +
Preference number: 5 (lower is better)
Translates to: VSSMGEGVRIASGLGVAVTQVLH*MLHSAL
Trigger: GAGAGCAGAGTGAAGCATCAAGTGGAGTACCTGGGT...AACTGCTACACCAAGGCCTGAAGCTATTCTGACACCTTCCCCCATGGAAGACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR CAA 90 bp GGGGGAAGGTGTCAGAATAGCTTCAGGCCTTGGTGTAGCAGTTGCTCACTGTCGATTAAGTACAAGCACTaGGGGGTTAGCAGCAGGTCT +
Preference number: 5 (lower is better)
Translates to: GGRCQNSFRPWCSSCSLSIKYKH*GVSSRS
Trigger: AGACCTGCTGCTAACCCCCAAGTGCTTGTACTTAAT...CGACAGTGAGCAACTGCTACACCAAGGCCTGAAGCTATTCTGACACCTTCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR CAA 90 bp TCTACCAAGAAATCAAAGACTCGTGCGTGCAGGGCCTTGGCGAGCGCGTCCCTGTCCAAAATATGGCATTaGCTTGAATGGGTTGACAGA +
Preference number: 5 (lower is better)
Translates to: STKKSKTRACRALASASLSKIWH*LEWVDR
Trigger: TCTGTCAACCCATTCAAGCAAATGCCATATTTTGGA...CAGGGACGCGCTCGCCAAGGCCCTGCACGCACGAGTCTTTGATTTCTTGGTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214042.2
CDS-3UTR CAA 90 bp ACAAGCGAAGACCAAGAGAAAGCAAGACCATCAGCCCAGCACCCAACTTCTTCCTCCTGGAAATCCCGCTaGTCATCAATGTCATCCACC +
Preference number: 5 (lower is better)
Translates to: TSEDQEKARPSAQHPTSSSWKSR*SSMSST
Trigger: GGTGGATGACATTGATGACAAGCGGGATTTCCAGGA...GGAAGAAGTTGGGTGCTGGGCTGATGGTCTTGCTTTCTCTTGGTCTTCGCTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR CAA 90 bp GAGGGACTGTGCGGGAATGCAGTGACTGTTTCTCTAGGCAAAGAGGAGAGGGCGGCTTCTTGGTTTCGTTaGGTTTTATGCAGCGAATGT +
Preference number: 5 (lower is better)
Translates to: EGLCGNAVTVSLGKEERAASWFR*VLCSEC
Trigger: ACATTCGCTGCATAAAACCAAACGAAACCAAGAAGC...CGCCCTCTCCTCTTTGCCTAGAGAAACAGTCACTGCATTCCCGCACAGTCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR CAA 90 bp GGAATGAGTGAGATGTGCTCTTCAACTAAAGGCACTTGTCATCGAGTCACCGCCCTCCTCCTCTCCTTCTaGTTCAACAGCAGGTCTGAG +
Preference number: 5 (lower is better)
Translates to: GMSEMCSSTKGTCHRVTALLLSF*FNSRSE
Trigger: CTCAGACCTGCTGTTGAACAAGAAGGAGAGGAGGAG...GGCGGTGACTCGATGACAAGTGCCTTTAGTTGAAGAGCACATCTCACTCATTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR CAA 90 bp GAGTGGGCAGGAGGCTGTGGGATAGACACCAAGCAGTCCCCGCTACTTACACCACAAACTGTCATATTCTaGCTCGTGGAGAATGAAGAT +
Preference number: 5 (lower is better)
Translates to: EWAGGCGIDTKQSPLLTPQTVIF*LVENED
Trigger: ATCTTCATTCTCCACGAGCAAGAATATGACAGTTTG...TGGTGTAAGTAGCGGGGACTGCTTGGTGTCTATCCCACAGCCTCCTGCCCACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR CAA 90 bp ATTACAAGCGAAGACCAAGAGAAAGCAAGACCATCAGCCCAGCACCCAACTTCTACTTTGTTGCTGGGCTaGAGGATAGCCAGGTCACCG +
Preference number: 5 (lower is better)
Translates to: ITSEDQEKARPSAQHPTSTLLLG*RIARSP
Trigger: CGGTGACCTGGCTATCCTCAAGCCCAGCAACAAAGT...AGAAGTTGGGTGCTGGGCTGATGGTCTTGCTTTCTCTTGGTCTTCGCTTGTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR CAA 90 bp GGGATAGACACCAAGCAGTCCCCGCTACTTACACCAGATTTAAATACAATAAATGTAGGACGGGAGTTCTaGGGCAGCCCGGGTCCGATG +
Preference number: 5 (lower is better)
Translates to: GIDTKQSPLLTPDLNTINVGREF*GSPGPM
Trigger: CATCGGACCCGGGCTGCCCAAGAACTCCCGTCCTAC...ATTTATTGTATTTAAATCTGGTGTAAGTAGCGGGGACTGCTTGGTGTCTATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR CAA 90 bp ATTACAAGCGAAGACCAAGAGAAAGCAAGACCATCAGCCCAGCACCCAACTTCTTGGTCGCTGTCCATGTaGACAGACTGCAGTAGATGG +
Preference number: 5 (lower is better)
Translates to: ITSEDQEKARPSAQHPTSWSLSM*TDCSRW
Trigger: CCATCTACTGCAGTCTGTCAACATGGACAGCGACCA...AGAAGTTGGGTGCTGGGCTGATGGTCTTGCTTTCTCTTGGTCTTCGCTTGTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR CAA 90 bp GTGTCTTCCATGGGGGAAGGTGTCAGAATAGCTTCAGGCCTTGGTGTAGCAGTTTTTCCTCGTATCGCTTaGCTAAGAGGCTCAGGAACT +
Preference number: 5 (lower is better)
Translates to: VSSMGEGVRIASGLGVAVFPRIA*LRGSGT
Trigger: AGTTCCTGAGCCTCTTAGCAAAGCGATACGAGGAAA...AACTGCTACACCAAGGCCTGAAGCTATTCTGACACCTTCCCCCATGGAAGACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR CAA 90 bp GGACTGTGCGGGAATGCAGTGACTGTTTCTCTAGGCAAAGAGGAGAGGGCGCGTTTCAGTTCAAGGGTATaGCTGAATTTCAGAGGTAGT +
Preference number: 5 (lower is better)
Translates to: GLCGNAVTVSLGKEERARFSSRV*LNFRGS
Trigger: ACTACCTCTGAAATTCAGCAATACCCTTGAACTGAA...ACGCGCCCTCTCCTCTTTGCCTAGAGAAACAGTCACTGCATTCCCGCACAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR CAA 90 bp TCAGGCCTTGGTGTAGCAGTTGCTCACTGTCGATCAGAAGAGGAGTCCCCAAAAGGCTTCTTCTCTCATTaGAACATATTTCTTGCGGGC +
Preference number: 5 (lower is better)
Translates to: SGLGVAVAHCRSEEESPKGFFSH*NIFLAG
Trigger: GCCCGCAAGAAATATGTTCAAATGAGAGAAGAAGCC...TTTTGGGGACTCCTCTTCTGATCGACAGTGAGCAACTGCTACACCAAGGCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR CAA 90 bp GGAATGAGTGAGATGTGCTCTTCAACTAAAGGCACTTGTCATCGAGTCACCGCCTCCAAAATATGGCATTaGCTTGAATGGGTTGACAGA +
Preference number: 5 (lower is better)
Translates to: GMSEMCSSTKGTCHRVTASKIWH*LEWVDR
Trigger: TCTGTCAACCCATTCAAGCAAATGCCATATTTTGGA...GGCGGTGACTCGATGACAAGTGCCTTTAGTTGAAGAGCACATCTCACTCATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034745.9
ENSMUST00000214042.2
CDS-3UTR CAA 90 bp CCTACCTTCATGAATGGGTACAGTGGAATACTACCTGCTGCATTCATATGTGCTGCTTGTTTCTTTATTTaGCTTCCTGCGGTCGTTGGG +
Preference number: 5 (lower is better)
Translates to: PTFMNGYSGILPAAFICAACFFI*LPAVVG
Trigger: CCCAACGACCGCAGGAAGCAAAATAAAGAAACAAGC...AGCACATATGAATGCAGCAGGTAGTATTCCACTGTACCCATTCATGAAGGTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR CAA 90 bp CCTACCTTCATGAATGGGTACAGTGGAATACTACCTGCTGCATTCATATGTGCTTCAATCTTCTCCCTCTaGCCTACAAACTGCTGCAGT +
Preference number: 5 (lower is better)
Translates to: PTFMNGYSGILPAAFICASIFSL*PTNCCS
Trigger: ACTGCAGCAGTTTGTAGGCAAGAGGGAGAAGATTGA...AGCACATATGAATGCAGCAGGTAGTATTCCACTGTACCCATTCATGAAGGTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR CAA 90 bp TACCTTCATGAATGGGTACAGTGGAATACTACCTGCTGCATTCATATGTGCTTCAACCTCCTGTCGTACTaGGTGACTGTGTCAGCAAAG +
Preference number: 5 (lower is better)
Translates to: YLHEWVQWNTTCCIHMCFNLLSY*VTVSAK
Trigger: CTTTGCTGACACAGTCACCAAGTACGACAGGAGGTT...GAAGCACATATGAATGCAGCAGGTAGTATTCCACTGTACCCATTCATGAAGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS-3UTR CAA 90 bp ATTACAAGCGAAGACCAAGAGAAAGCAAGACCATCAGCCCAGCACCCAACTTCTATTTGCTTGAATGGGTaGACAGAGATTAATACAGAC +
Preference number: 5 (lower is better)
Translates to: ITSEDQEKARPSAQHPTSICLNG*TEINTD
Trigger: GTCTGTATTAATCTCTGTCAACCCATTCAAGCAAAT...AGAAGTTGGGTGCTGGGCTGATGGTCTTGCTTTCTCTTGGTCTTCGCTTGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034745.9
ENSMUST00000214042.2
CDS-3UTR CAA 90 bp ATTACAAGCGAAGACCAAGAGAAAGCAAGACCATCAGCCCAGCACCCAACTTCTTTTTCGTTAACGAAATaGATGCAGAACTGCTCAAAG +
Preference number: 5 (lower is better)
Translates to: ITSEDQEKARPSAQHPTSFSLTK*MQNCSK
Trigger: CTTTGAGCAGTTCTGCATCAATTTCGTTAACGAAAA...AGAAGTTGGGTGCTGGGCTGATGGTCTTGCTTTCTCTTGGTCTTCGCTTGTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034745.9
CDS CAA 72 bp TTCTTCAGGTTCTCTACAATGGAGCTCTCTGTGATCTaGGACAGTAGAACCATGTCGTCCACACCACTGTGC +
Preference number: 6 (lower is better)
Translates to: FFRFSTMELSVI*DSRTMSSTPLC
Trigger: GCACAGTGGTGTGGACGACATGGTTCTACTGTCCAAGATCACAGAGAGCTCCATTGTAGAGAACCTGAAGAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034745.9
ENSMUST00000214042.2
CDS TCA 72 bp ATCTCTTCTTCAGGTTCTCTACAATGGAGCTCTCTGTaGTCTTGGACAGTAGAACCATGTCGTCCACACCAC +
Preference number: 6 (lower is better)
Translates to: ISSSGSLQWSSL*SWTVEPCRPHH
Trigger: GTGGTGTGGACGACATGGTTCTACTGTCCAAGATCACAGAGAGCTCCATTGTAGAGAACCTGAAGAAGAGAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034745.9
ENSMUST00000214042.2
CDS CAA 90 bp ATGTATCTCTTCTTCAGGTTCTCTACAATGGAGCTCTCTGTGATCTaGGACAGTAGAACCATGTCGTCCACACCACTGTGCTTGACATTG +
Preference number: 6 (lower is better)
Translates to: MYLFFRFSTMELSVI*DSRTMSSTPLCLTL
Trigger: CAATGTCAAGCACAGTGGTGTGGACGACATGGTTCTACTGTCCAAGATCACAGAGAGCTCCATTGTAGAGAACCTGAAGAAGAGATACAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034745.9
ENSMUST00000214042.2