RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MYO19 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000020527

Ensembl transcript IDs: ENSMUST00000020837.7, ENSMUST00000093969.11

Found 246 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGTACCCAGCACCCCCAGATCCTGCCAGTGCTGAAGCCACAGCCCTaGAAGGCTGGCACTCTGGCCATGAAGCCCTGGCTCAGGCTGGAA +
Preference number: 1 (lower is better)
Translates to: GTQHPQILPVLKPQP*KAGTLAMKPWLRLE
Trigger: TTCCAGCCTGAGCCAGGGCTTCATGGCCAGAGTGCCAGCCTTCCAGGGCTGTGGCTTCAGCACTGGCAGGATCTGGGGGTGCTGGGTACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
3UTR CCA 90 bp CTGAAGCCACAGCCCTGGAAGGCTGGCACTCTGGCCATGAAGCCCTaGCTCAGGCTGGAATTTGCTTGCACGTGCAGTTGGAGTCGCCGT +
Preference number: 1 (lower is better)
Translates to: LKPQPWKAGTLAMKP*LRLEFACTCSWSRR
Trigger: ACGGCGACTCCAACTGCACGTGCAAGCAAATTCCAGCCTGAGCCAGGGCTTCATGGCCAGAGTGCCAGCCTTCCAGGGCTGTGGCTTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
3UTR GCA 90 bp GCTGGCACTCTGGCCATGAAGCCCTGGCTCAGGCTGGAATTTGCTTaGACGTGCAGTTGGAGTCGCCGTGGGAATAGCTTGGCACTTGCG +
Preference number: 1 (lower is better)
Translates to: AGTLAMKPWLRLEFA*TCSWSRRGNSLALA
Trigger: CGCAAGTGCCAAGCTATTCCCACGGCGACTCCAACTGCACGTGCAAGCAAATTCCAGCCTGAGCCAGGGCTTCATGGCCAGAGTGCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
3UTR TCA 90 bp GTAAGCCAGGTGTCACTGCACACTCCTTTAATCAGAGCTGGAGGCTaGCAGATCTGTGAGTGTGAGGACAGCCTGGTCTTCGTGAGTTCC +
Preference number: 1 (lower is better)
Translates to: VSQVSLHTPLIRAGG*QICECEDSLVFVSS
Trigger: GGAACTCACGAAGACCAGGCTGTCCTCACACTCACAGATCTGTCAGCCTCCAGCTCTGATTAAAGGAGTGTGCAGTGACACCTGGCTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020837.7
3UTR CCA 90 bp TGGAATTTGCTTGCACGTGCAGTTGGAGTCGCCGTGGGAATAGCTTaGCACTTGCGTGTGGGATCTAATGTCTTTGGCAAGACAGCTGGC +
Preference number: 1 (lower is better)
Translates to: WNLLARAVGVAVGIA*HLRVGSNVFGKTAG
Trigger: GCCAGCTGTCTTGCCAAAGACATTAGATCCCACACGCAAGTGCCAAGCTATTCCCACGGCGACTCCAACTGCACGTGCAAGCAAATTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
3UTR CCA 90 bp GCTTGTGGATGGCCCAGTATCCATCTTGCTGTAGTGACAACATTCTaGATGGAGCTTGAGCACAAAGATACTAAGCTGGGATGTTGTGGC +
Preference number: 1 (lower is better)
Translates to: ACGWPSIHLAVVTTF*MELEHKDTKLGCCG
Trigger: GCCACAACATCCCAGCTTAGTATCTTTGTGCTCAAGCTCCATCCAGAATGTTGTCACTACAGCAAGATGGATACTGGGCCATCCACAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
3UTR TCA 90 bp ACTGAACTCAGGTCTTCTACAAGAGCAATAAATGCTTTGAACCACTaGGTTCTCTCTTCAGCCCCAGTCAAGGAAGAGGTGAGAGCAAGT +
Preference number: 1 (lower is better)
Translates to: TELRSSTRAINALNH*VLSSAPVKEEVRAS
Trigger: ACTTGCTCTCACCTCTTCCTTGACTGGGGCTGAAGAGAGAACTCAGTGGTTCAAAGCATTTATTGCTCTTGTAGAAGACCTGAGTTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020837.7
3UTR TCA 90 bp GATGAGGTTATGGGAGTTGTGAGCCATCATGTGGATGCTGGGAACTaGACTCAGGTCTTCTACAAGAGCAATAAATGCTTTGAACCACTG +
Preference number: 1 (lower is better)
Translates to: DEVMGVVSHHVDAGN*TQVFYKSNKCFEPL
Trigger: CAGTGGTTCAAAGCATTTATTGCTCTTGTAGAAGACCTGAGTTCAGTTCCCAGCATCCACATGATGGCTCACAACTCCCATAACCTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020837.7
3UTR-3UTR TCA 90 bp TGGCTTGGTACCCAGCACCCCCAGATCCTGCCAGTGCTGAAGCCACAGCCCTGGCTGGCACTCTGGCCATaGAGCCCTGGCTCAGGCTGG +
Preference number: 2 (lower is better)
Translates to: WLGTQHPQILPVLKPQPWLALWP*SPGSGW
Trigger: CCAGCCTGAGCCAGGGCTTCATGGCCAGAGTGCCAG...CCAGGGCTGTGGCTTCAGCACTGGCAGGATCTGGGGGTGCTGGGTACCAAGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
3UTR-3UTR CCA 90 bp GATCCTGCCAGTGCTGAAGCCACAGCCCTGGAAGGCTGGCACTCTGGCCATGAACTTTGGCAAGACAGCTaGCAGGAAAAGGCCTTGTGG +
Preference number: 2 (lower is better)
Translates to: DPASAEATALEGWHSGHELWQDS*QEKALW
Trigger: CCACAAGGCCTTTTCCTGCCAGCTGTCTTGCCAAAG...TTCATGGCCAGAGTGCCAGCCTTCCAGGGCTGTGGCTTCAGCACTGGCAGGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
3UTR-3UTR CCA 90 bp TGGCACTCTGGCCATGAAGCCCTGGCTCAGGCTGGAATTTGCTTGCACGTGCAGCTTGGCACTTGCGTGTaGGATCTAATGTCTTTGGCA +
Preference number: 2 (lower is better)
Translates to: WHSGHEALAQAGICLHVQLGTCV*DLMSLA
Trigger: TGCCAAAGACATTAGATCCCACACGCAAGTGCCAAG...CTGCACGTGCAAGCAAATTCCAGCCTGAGCCAGGGCTTCATGGCCAGAGTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
3UTR CAA 90 bp TTGCTTGCACGTGCAGTTGGAGTCGCCGTGGGAATAGCTTGGCACTaGCGTGTGGGATCTAATGTCTTTGGCAAGACAGCTGGCAGGAAA +
Preference number: 2 (lower is better)
Translates to: LLARAVGVAVGIAWH*RVGSNVFGKTAGRK
Trigger: TTTCCTGCCAGCTGTCTTGCCAAAGACATTAGATCCCACACGCAAGTGCCAAGCTATTCCCACGGCGACTCCAACTGCACGTGCAAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
3UTR-3UTR GCA 90 bp GGATGGAGCTTGAGCACAAAGATACTAAGCTGGGATGTTGTGGCCCTAATCCTGAGGCTGGAATTTGCTTaGACGTGCAGTTGGAGTCGC +
Preference number: 2 (lower is better)
Translates to: GWSLSTKILSWDVVALILRLEFA*TCSWSR
Trigger: GCGACTCCAACTGCACGTGCAAGCAAATTCCAGCCT...CAGGATTAGGGCCACAACATCCCAGCTTAGTATCTTTGTGCTCAAGCTCCATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
3UTR-3UTR TCA 90 bp CAGGTCTTCTACAAGAGCAATAAATGCTTTGAACCACTGAGTTCTCTCTTCAGCACAGCCTGGTCTTCGTaGGTTCCAGGACAGCCAGAG +
Preference number: 2 (lower is better)
Translates to: QVFYKSNKCFEPLSSLFSTAWSS*VPGQPE
Trigger: CTCTGGCTGTCCTGGAACTCACGAAGACCAGGCTGT...GCTGAAGAGAGAACTCAGTGGTTCAAAGCATTTATTGCTCTTGTAGAAGACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020837.7
3UTR-3UTR TCA 90 bp AGTCAAGGAAGAGGTGAGAGCAAGTGCTTCCTACAGGTTTTAGGCAGACACAGCAAGCTATGCCACCTTTaGCAAACTTCCTTCTTTTGG +
Preference number: 2 (lower is better)
Translates to: SQGRGESKCFLQVLGRHSKLCHL*QTSFFW
Trigger: CCAAAAGAAGGAAGTTTGTCAAAGGTGGCATAGCTT...GCTGTGTCTGCCTAAAACCTGTAGGAAGCACTTGCTCTCACCTCTTCCTTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020837.7
3UTR-3UTR CCA 90 bp GTCTTCTACAAGAGCAATAAATGCTTTGAACCACTGAGTTCTCTCTTCAGCCCCCAAACTTCCTTCTTTTaGCACGTTAGGAAACTCAAC +
Preference number: 2 (lower is better)
Translates to: VFYKSNKCFEPLSSLFSPQTSFF*HVRKLN
Trigger: GTTGAGTTTCCTAACGTGCCAAAAGAAGGAAGTTTG...GGGGCTGAAGAGAGAACTCAGTGGTTCAAAGCATTTATTGCTCTTGTAGAAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020837.7
3UTR TCA 72 bp GGCTTGGTACCCAGCACCCCCAGATCCTGCCAGTGCTaGAGCCACAGCCCTGGAAGGCTGGCACTCTGGCCA +
Preference number: 3 (lower is better)
Translates to: GLVPSTPRSCQC*SHSPGRLALWP
Trigger: TGGCCAGAGTGCCAGCCTTCCAGGGCTGTGGCTTCAGCACTGGCAGGATCTGGGGGTGCTGGGTACCAAGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
3UTR CCA 72 bp CACCCCCAGATCCTGCCAGTGCTGAAGCCACAGCCCTaGAAGGCTGGCACTCTGGCCATGAAGCCCTGGCTC +
Preference number: 3 (lower is better)
Translates to: HPQILPVLKPQP*KAGTLAMKPWL
Trigger: GAGCCAGGGCTTCATGGCCAGAGTGCCAGCCTTCCAGGGCTGTGGCTTCAGCACTGGCAGGATCTGGGGGTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
3UTR CCA 72 bp GATCCTGCCAGTGCTGAAGCCACAGCCCTGGAAGGCTaGCACTCTGGCCATGAAGCCCTGGCTCAGGCTGGA +
Preference number: 3 (lower is better)
Translates to: DPASAEATALEG*HSGHEALAQAG
Trigger: TCCAGCCTGAGCCAGGGCTTCATGGCCAGAGTGCCAGCCTTCCAGGGCTGTGGCTTCAGCACTGGCAGGATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
3UTR CCA 72 bp CAGCCCTGGAAGGCTGGCACTCTGGCCATGAAGCCCTaGCTCAGGCTGGAATTTGCTTGCACGTGCAGTTGG +
Preference number: 3 (lower is better)
Translates to: QPWKAGTLAMKP*LRLEFACTCSW
Trigger: CCAACTGCACGTGCAAGCAAATTCCAGCCTGAGCCAGGGCTTCATGGCCAGAGTGCCAGCCTTCCAGGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
3UTR-3UTR CAA 90 bp TGGCTTGGTACCCAGCACCCCCAGATCCTGCCAGTGCTGAAGCCACAGCCCTGGTGGGATCTAATGTCTTaGGCAAGACAGCTGGCAGGA +
Preference number: 3 (lower is better)
Translates to: WLGTQHPQILPVLKPQPWWDLMS*ARQLAG
Trigger: TCCTGCCAGCTGTCTTGCCAAAGACATTAGATCCCA...CCAGGGCTGTGGCTTCAGCACTGGCAGGATCTGGGGGTGCTGGGTACCAAGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
3UTR CCA 72 bp CTTGCACGTGCAGTTGGAGTCGCCGTGGGAATAGCTTaGCACTTGCGTGTGGGATCTAATGTCTTTGGCAAG +
Preference number: 3 (lower is better)
Translates to: LARAVGVAVGIA*HLRVGSNVFGK
Trigger: CTTGCCAAAGACATTAGATCCCACACGCAAGTGCCAAGCTATTCCCACGGCGACTCCAACTGCACGTGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
3UTR TCA 72 bp GTGTCACTGCACACTCCTTTAATCAGAGCTGGAGGCTaGCAGATCTGTGAGTGTGAGGACAGCCTGGTCTTC +
Preference number: 3 (lower is better)
Translates to: VSLHTPLIRAGG*QICECEDSLVF
Trigger: GAAGACCAGGCTGTCCTCACACTCACAGATCTGTCAGCCTCCAGCTCTGATTAAAGGAGTGTGCAGTGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020837.7
3UTR GCA 72 bp CTCTTCAGCCCCAGTCAAGGAAGAGGTGAGAGCAAGTaGTTCCTACAGGTTTTAGGCAGACACAGCATGTGG +
Preference number: 3 (lower is better)
Translates to: LFSPSQGRGESK*FLQVLGRHSMW
Trigger: CCACATGCTGTGTCTGCCTAAAACCTGTAGGAAGCACTTGCTCTCACCTCTTCCTTGACTGGGGCTGAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020837.7
3UTR CCA 72 bp CATTCTGGATGGAGCTTGAGCACAAAGATACTAAGCTaGGATGTTGTGGCCCTAATCCTGGCTTGGTACCCA +
Preference number: 3 (lower is better)
Translates to: HSGWSLSTKILS*DVVALILAWYP
Trigger: TGGGTACCAAGCCAGGATTAGGGCCACAACATCCCAGCTTAGTATCTTTGTGCTCAAGCTCCATCCAGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
3UTR CCA 72 bp TCAGAAGAGGTGGACCATCCCTTAGAACTGGAATTATaGGATGAGGTTATGGGAGTTGTGAGCCATCATGTG +
Preference number: 3 (lower is better)
Translates to: SEEVDHPLELEL*DEVMGVVSHHV
Trigger: CACATGATGGCTCACAACTCCCATAACCTCATCCCATAATTCCAGTTCTAAGGGATGGTCCACCTCTTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020837.7
3UTR CCA 72 bp TGGCCCAGTATCCATCTTGCTGTAGTGACAACATTCTaGATGGAGCTTGAGCACAAAGATACTAAGCTGGGA +
Preference number: 3 (lower is better)
Translates to: WPSIHLAVVTTF*MELEHKDTKLG
Trigger: TCCCAGCTTAGTATCTTTGTGCTCAAGCTCCATCCAGAATGTTGTCACTACAGCAAGATGGATACTGGGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
3UTR-3UTR CAA 90 bp CAGGTCTTCTACAAGAGCAATAAATGCTTTGAACCACTGAGTTCTCTCTTCAGCTCTAGAAAAGGGGTTTaGCAGATGCTAGGCTCTAGC +
Preference number: 3 (lower is better)
Translates to: QVFYKSNKCFEPLSSLFSSRKGV*QMLGSS
Trigger: GCTAGAGCCTAGCATCTGCAAAACCCCTTTTCTAGA...GCTGAAGAGAGAACTCAGTGGTTCAAAGCATTTATTGCTCTTGTAGAAGACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020837.7
3UTR-3UTR CAA 90 bp CAGGTCTTCTACAAGAGCAATAAATGCTTTGAACCACTGAGTTCTCTCTTCAGCAAAGCTATGCCACCTTaGACAAACTTCCTTCTTTTG +
Preference number: 3 (lower is better)
Translates to: QVFYKSNKCFEPLSSLFSKAMPP*TNFLLL
Trigger: CAAAAGAAGGAAGTTTGTCAAAGGTGGCATAGCTTT...GCTGAAGAGAGAACTCAGTGGTTCAAAGCATTTATTGCTCTTGTAGAAGACCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020837.7
CDS-3UTR TCA 90 bp TGGCTTGGTACCCAGCACCCCCAGATCCTGCCAGTGCTGAAGCCACAGCCCTGGAGCTGGGCTCCCGGCTaGGCTTGTTATGGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: WLGTQHPQILPVLKPQPWSWAPG*ACYGPG
Trigger: GCCTGGGCCATAACAAGCTCAGCCGGGAGCCCAGCT...CCAGGGCTGTGGCTTCAGCACTGGCAGGATCTGGGGGTGCTGGGTACCAAGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR TCA 90 bp GCCAGTGCTGAAGCCACAGCCCTGGAAGGCTGGCACTCTGGCCATGAAGCCCTGCCCTTAGGTCTCCCTTaGGGGAGGCCCTACCTTCGG +
Preference number: 4 (lower is better)
Translates to: ASAEATALEGWHSGHEALPLGLP*GRPYLR
Trigger: CCGAAGGTAGGGCCTCCCTCAAGGGAGACCTAAGGG...CAGGGCTTCATGGCCAGAGTGCCAGCCTTCCAGGGCTGTGGCTTCAGCACTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR CCA 90 bp GTGCTGAAGCCACAGCCCTGGAAGGCTGGCACTCTGGCCATGAAGCCCTGGCTCCGCCTCCAGCCACACTaGATGCAACGGGCACACTGC +
Preference number: 4 (lower is better)
Translates to: VLKPQPWKAGTLAMKPWLRLQPH*MQRAHC
Trigger: GCAGTGTGCCCGTTGCATCCAGTGTGGCTGGAGGCG...GAGCCAGGGCTTCATGGCCAGAGTGCCAGCCTTCCAGGGCTGTGGCTTCAGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR GCA 90 bp TGGCTTGGTACCCAGCACCCCCAGATCCTGCCAGTGCTGAAGCCACAGCCCTGGTGGCCAGACAGTCTCTaGGTGTGTCACACTCGGCTC +
Preference number: 4 (lower is better)
Translates to: WLGTQHPQILPVLKPQPWWPDSL*VCHTRL
Trigger: GAGCCGAGTGTGACACACGCAGAGACTGTCTGGCCA...CCAGGGCTGTGGCTTCAGCACTGGCAGGATCTGGGGGTGCTGGGTACCAAGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR CCA 90 bp GTGCTGAAGCCACAGCCCTGGAAGGCTGGCACTCTGGCCATGAAGCCCTGGCTCCACTGCTCCAGCATCTaGGCACGCCCACATTCCAGA +
Preference number: 4 (lower is better)
Translates to: VLKPQPWKAGTLAMKPWLHCSSI*ARPHSR
Trigger: TCTGGAATGTGGGCGTGCCCAGATGCTGGAGCAGTG...GAGCCAGGGCTTCATGGCCAGAGTGCCAGCCTTCCAGGGCTGTGGCTTCAGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR GCA 90 bp GCCAGTGCTGAAGCCACAGCCCTGGAAGGCTGGCACTCTGGCCATGAAGCCCTGTCTGTGTATCGGGCCTaGAGGCACCTCAGGACTGTT +
Preference number: 4 (lower is better)
Translates to: ASAEATALEGWHSGHEALSVYRA*RHLRTV
Trigger: AACAGTCCTGAGGTGCCTGCAGGCCCGATACACAGA...CAGGGCTTCATGGCCAGAGTGCCAGCCTTCCAGGGCTGTGGCTTCAGCACTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR GCA 90 bp GATCCTGCCAGTGCTGAAGCCACAGCCCTGGAAGGCTGGCACTCTGGCCATGAACGAGGCCAGAGGACATaGGAGGTCCGAGCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: DPASAEATALEGWHSGHERGQRT*EVRAFS
Trigger: TGAGAAGGCTCGGACCTCGCATGTCCTCTGGCCTCG...TTCATGGCCAGAGTGCCAGCCTTCCAGGGCTGTGGCTTCAGCACTGGCAGGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR TCA 90 bp GCCAGTGCTGAAGCCACAGCCCTGGAAGGCTGGCACTCTGGCCATGAAGCCCTGGCTGCTTGCCTGCCTTaGTGGTTCGAATCTGCATAC +
Preference number: 4 (lower is better)
Translates to: ASAEATALEGWHSGHEALAACLP*WFESAY
Trigger: GTATGCAGATTCGAACCATCAAGGCAGGCAAGCAGC...CAGGGCTTCATGGCCAGAGTGCCAGCCTTCCAGGGCTGTGGCTTCAGCACTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR TCA 90 bp GTGCTGAAGCCACAGCCCTGGAAGGCTGGCACTCTGGCCATGAAGCCCTGGCTCGGAGACTTCCTGCAGTaGAACTTTATCGAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: VLKPQPWKAGTLAMKPWLGDFLQ*NFIEPW
Trigger: CCAGGGCTCGATAAAGTTTCACTGCAGGAAGTCTCC...GAGCCAGGGCTTCATGGCCAGAGTGCCAGCCTTCCAGGGCTGTGGCTTCAGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR GCA 90 bp GCTTGGTACCCAGCACCCCCAGATCCTGCCAGTGCTGAAGCCACAGCCCTGGAACGAAGCGGCTGCTGTTaGTGTTCCTCAGTGTGCATG +
Preference number: 4 (lower is better)
Translates to: AWYPAPPDPASAEATALERSGCC*CSSVCM
Trigger: CATGCACACTGAGGAACAGCAACAGCAGCCGCTTCG...TTCCAGGGCTGTGGCTTCAGCACTGGCAGGATCTGGGGGTGCTGGGTACCAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR GCA 90 bp GTGCTGAAGCCACAGCCCTGGAAGGCTGGCACTCTGGCCATGAAGCCCTGGCTCCCAGTCGAACAGCCGTaGATAGATCAGTTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: VLKPQPWKAGTLAMKPWLPVEQP*IDQFGQ
Trigger: CTGGCCAAACTGATCTATGCACGGCTGTTCGACTGG...GAGCCAGGGCTTCATGGCCAGAGTGCCAGCCTTCCAGGGCTGTGGCTTCAGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR CCA 90 bp GATCCTGCCAGTGCTGAAGCCACAGCCCTGGAAGGCTGGCACTCTGGCCATGAAATCCAGCTGGTGCAGTaGGATCTCCCCACCCAGGAA +
Preference number: 4 (lower is better)
Translates to: DPASAEATALEGWHSGHEIQLVQ*DLPTQE
Trigger: TTCCTGGGTGGGGAGATCCCACTGCACCAGCTGGAT...TTCATGGCCAGAGTGCCAGCCTTCCAGGGCTGTGGCTTCAGCACTGGCAGGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR CCA 90 bp GTGCTGAAGCCACAGCCCTGGAAGGCTGGCACTCTGGCCATGAAGCCCTGGCTCTCAGGGAGGTGCCATTaGAGCCTTTCATCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: VLKPQPWKAGTLAMKPWLSGRCH*SLSSLV
Trigger: CACCAAGGATGAAAGGCTCCAATGGCACCTCCCTGA...GAGCCAGGGCTTCATGGCCAGAGTGCCAGCCTTCCAGGGCTGTGGCTTCAGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR CCA 90 bp TGGCACTCTGGCCATGAAGCCCTGGCTCAGGCTGGAATTTGCTTGCACGTGCAGCGGGAGCAGGGCTTCTaGAACACCTGCTGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: WHSGHEALAQAGICLHVQREQGF*NTCCCL
Trigger: CAAGCAGCAGCAGGTGTTCCAGAAGCCCTGCTCCCG...CTGCACGTGCAAGCAAATTCCAGCCTGAGCCAGGGCTTCATGGCCAGAGTGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR TCA 90 bp GCTTGGTACCCAGCACCCCCAGATCCTGCCAGTGCTGAAGCCACAGCCCTGGAACACAGATGCTGCTGTTaGTCACAGACACCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: AWYPAPPDPASAEATALEHRCCC*SQTPAS
Trigger: ACTGGCTGGTGTCTGTGATCAACAGCAGCATCTGTG...TTCCAGGGCTGTGGCTTCAGCACTGGCAGGATCTGGGGGTGCTGGGTACCAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR TCA 90 bp GCCAGTGCTGAAGCCACAGCCCTGGAAGGCTGGCACTCTGGCCATGAAGCCCTGCATCTAGCAGCCCTATaGAGGCAGTCCATGATTTGG +
Preference number: 4 (lower is better)
Translates to: ASAEATALEGWHSGHEALHLAAL*RQSMIW
Trigger: CCAAATCATGGACTGCCTTCATAGGGCTGCTAGATG...CAGGGCTTCATGGCCAGAGTGCCAGCCTTCCAGGGCTGTGGCTTCAGCACTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR GCA 90 bp GATCCTGCCAGTGCTGAAGCCACAGCCCTGGAAGGCTGGCACTCTGGCCATGAAGAGGTAGGTCTGGACTaGAGCTCCTGTCATCTGCTG +
Preference number: 4 (lower is better)
Translates to: DPASAEATALEGWHSGHEEVGLD*SSCHLL
Trigger: CAGCAGATGACAGGAGCTGCAGTCCAGACCTACCTC...TTCATGGCCAGAGTGCCAGCCTTCCAGGGCTGTGGCTTCAGCACTGGCAGGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR GCA 90 bp GTTGTGGCCCTAATCCTGGCTTGGTACCCAGCACCCCCAGATCCTGCCAGTGCTGTTCCCTCAGGGAGGTaGCATTGGAGCCTTTCATCC +
Preference number: 4 (lower is better)
Translates to: VVALILAWYPAPPDPASAVPSGR*HWSLSS
Trigger: GGATGAAAGGCTCCAATGGCACCTCCCTGAGGGAAC...AGCACTGGCAGGATCTGGGGGTGCTGGGTACCAAGCCAGGATTAGGGCCACAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR CCA 90 bp GATCCTGCCAGTGCTGAAGCCACAGCCCTGGAAGGCTGGCACTCTGGCCATGAATGCCCAAATGGAGCATaGCCTCTCTGGTCACCTCGA +
Preference number: 4 (lower is better)
Translates to: DPASAEATALEGWHSGHECPNGA*PLWSPR
Trigger: TCGAGGTGACCAGAGAGGCCATGCTCCATTTGGGCA...TTCATGGCCAGAGTGCCAGCCTTCCAGGGCTGTGGCTTCAGCACTGGCAGGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR CCA 90 bp GCTTGGTACCCAGCACCCCCAGATCCTGCCAGTGCTGAAGCCACAGCCCTGGAAGTATCATCCATCACTTaGCAGGGCAGGGCTTCATCC +
Preference number: 4 (lower is better)
Translates to: AWYPAPPDPASAEATALEVSSIT*QGRASS
Trigger: GGATGAAGCCCTGCCCTGCCAAGTGATGGATGATAC...TTCCAGGGCTGTGGCTTCAGCACTGGCAGGATCTGGGGGTGCTGGGTACCAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR CCA 90 bp TGGCTTGGTACCCAGCACCCCCAGATCCTGCCAGTGCTGAAGCCACAGCCCTGGGTGCATAGATCAGTTTaGCCAGACAGTCTCTGCGTG +
Preference number: 4 (lower is better)
Translates to: WLGTQHPQILPVLKPQPWVHRSV*PDSLCV
Trigger: CACGCAGAGACTGTCTGGCCAAACTGATCTATGCAC...CCAGGGCTGTGGCTTCAGCACTGGCAGGATCTGGGGGTGCTGGGTACCAAGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR CCA 90 bp GCTTGGTACCCAGCACCCCCAGATCCTGCCAGTGCTGAAGCCACAGCCCTGGAATCTGGACTTTGTTGCTaGGTCTGTCTGAGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: AWYPAPPDPASAEATALESGLCC*VCLREA
Trigger: GGCTTCCCTCAGACAGACCCAGCAACAAAGTCCAGA...TTCCAGGGCTGTGGCTTCAGCACTGGCAGGATCTGGGGGTGCTGGGTACCAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR TCA 90 bp GGCACTTGCGTGTGGGATCTAATGTCTTTGGCAAGACAGCTGGCAGGAAAAGGCGTTGCTGGGTCTGTCTaGGGGAAGCCGAAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: GTCVWDLMSLARQLAGKGVAGSV*GKPKAG
Trigger: GCCTGCCTTCGGCTTCCCTCAGACAGACCCAGCAAC...GCCTTTTCCTGCCAGCTGTCTTGCCAAAGACATTAGATCCCACACGCAAGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR GCA 90 bp TGGCACTCTGGCCATGAAGCCCTGGCTCAGGCTGGAATTTGCTTGCACGTGCAGGGGTCTTGGGATTGCTaGAGGAGCTCAGTCAGCTCA +
Preference number: 4 (lower is better)
Translates to: WHSGHEALAQAGICLHVQGSWDC*RSSVSS
Trigger: TGAGCTGACTGAGCTCCTGCAGCAATCCCAAGACCC...CTGCACGTGCAAGCAAATTCCAGCCTGAGCCAGGGCTTCATGGCCAGAGTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR GCA 90 bp GATCCTGCCAGTGCTGAAGCCACAGCCCTGGAAGGCTGGCACTCTGGCCATGAATCCTGTAGTAGAGGTTaGAGTGTGGCCTCCTTGGCA +
Preference number: 4 (lower is better)
Translates to: DPASAEATALEGWHSGHESCSRG*SVASLA
Trigger: TGCCAAGGAGGCCACACTGCAACCTCTACTACAGGA...TTCATGGCCAGAGTGCCAGCCTTCCAGGGCTGTGGCTTCAGCACTGGCAGGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR CCA 90 bp GTGCTGAAGCCACAGCCCTGGAAGGCTGGCACTCTGGCCATGAAGCCCTGGCTCCTTCCATCACAGGGTTaGAGTTCAGAATCCGCTGTT +
Preference number: 4 (lower is better)
Translates to: VLKPQPWKAGTLAMKPWLLPSQG*SSESAV
Trigger: AACAGCGGATTCTGAACTCCAACCCTGTGATGGAAG...GAGCCAGGGCTTCATGGCCAGAGTGCCAGCCTTCCAGGGCTGTGGCTTCAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR CCA 90 bp AGCTGGGATGTTGTGGCCCTAATCCTGGCTTGGTACCCAGCACCCCCAGATCCTGTGTCGATGCCCAAATaGAGCATGGCCTCTCTGGTC +
Preference number: 4 (lower is better)
Translates to: SWDVVALILAWYPAPPDPVSMPK*SMASLV
Trigger: GACCAGAGAGGCCATGCTCCATTTGGGCATCGACAC...AGGATCTGGGGGTGCTGGGTACCAAGCCAGGATTAGGGCCACAACATCCCAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR TCA 90 bp AGCTGGGATGTTGTGGCCCTAATCCTGGCTTGGTACCCAGCACCCCCAGATCCTGTTCCAGTGAGGCCTTaGACTTGGACACCACAGTCA +
Preference number: 4 (lower is better)
Translates to: SWDVVALILAWYPAPPDPVPVRP*TWTPQS
Trigger: TGACTGTGGTGTCCAAGTTCAAGGCCTCACTGGAAC...AGGATCTGGGGGTGCTGGGTACCAAGCCAGGATTAGGGCCACAACATCCCAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR TCA 90 bp GTTGTGGCCCTAATCCTGGCTTGGTACCCAGCACCCCCAGATCCTGCCAGTGCTTCTATGAAGTTCTGGTaGGAGACCCGGATGGGAAAG +
Preference number: 4 (lower is better)
Translates to: VVALILAWYPAPPDPASASMKFW*ETRMGK
Trigger: CTTTCCCATCCGGGTCTCTCACCAGAACTTCATAGA...AGCACTGGCAGGATCTGGGGGTGCTGGGTACCAAGCCAGGATTAGGGCCACAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR TCA 90 bp GGCACTTGCGTGTGGGATCTAATGTCTTTGGCAAGACAGCTGGCAGGAAAAGGCAGGGTACCAGGAGCCTaGGGCATGGGTTTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: GTCVWDLMSLARQLAGKGRVPGA*GMGFSS
Trigger: GGAGGAGAAACCCATGCCTCAGGCTCCTGGTACCCT...GCCTTTTCCTGCCAGCTGTCTTGCCAAAGACATTAGATCCCACACGCAAGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR GCA 90 bp GTGCTGAAGCCACAGCCCTGGAAGGCTGGCACTCTGGCCATGAAGCCCTGGCTCCCTTGGTGGCTCCTTTaGAAATCTGGTAGAAGATGT +
Preference number: 4 (lower is better)
Translates to: VLKPQPWKAGTLAMKPWLPWWLL*KSGRRC
Trigger: ACATCTTCTACCAGATTTGCAAAGGAGCCACCAAGG...GAGCCAGGGCTTCATGGCCAGAGTGCCAGCCTTCCAGGGCTGTGGCTTCAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR GCA 90 bp AGCTGGGATGTTGTGGCCCTAATCCTGGCTTGGTACCCAGCACCCCCAGATCCTATTTTCTCTGGGAGCTaGAGCAGCAAGGCTGAGGTC +
Preference number: 4 (lower is better)
Translates to: SWDVVALILAWYPAPPDPIFSGS*SSKAEV
Trigger: GACCTCAGCCTTGCTGCTGCAGCTCCCAGAGAAAAT...AGGATCTGGGGGTGCTGGGTACCAAGCCAGGATTAGGGCCACAACATCCCAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR GCA 90 bp AGCTGGGATGTTGTGGCCCTAATCCTGGCTTGGTACCCAGCACCCCCAGATCCTCTGCTGCTGCTTGCCTaGCTTGATGGTTCGAATCTG +
Preference number: 4 (lower is better)
Translates to: SWDVVALILAWYPAPPDPLLLLA*LDGSNL
Trigger: CAGATTCGAACCATCAAGGCAGGCAAGCAGCAGCAG...AGGATCTGGGGGTGCTGGGTACCAAGCCAGGATTAGGGCCACAACATCCCAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR GCA 90 bp AGCTGGGATGTTGTGGCCCTAATCCTGGCTTGGTACCCAGCACCCCCAGATCCTTCTCCACTTATGCCATaGGTGCTTGATGACCGTGGC +
Preference number: 4 (lower is better)
Translates to: SWDVVALILAWYPAPPDPSPLMP*VLDDRG
Trigger: GCCACGGTCATCAAGCACGCATGGCATAAGTGGAGA...AGGATCTGGGGGTGCTGGGTACCAAGCCAGGATTAGGGCCACAACATCCCAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR GCA 90 bp GTGCTGAAGCCACAGCCCTGGAAGGCTGGCACTCTGGCCATGAAGCCCTGGCTCGAAGTGGAGACTTCCTaGAGTGAAACTTTATCGAGC +
Preference number: 4 (lower is better)
Translates to: VLKPQPWKAGTLAMKPWLEVETS*SETLSS
Trigger: GCTCGATAAAGTTTCACTGCAGGAAGTCTCCACTTC...GAGCCAGGGCTTCATGGCCAGAGTGCCAGCCTTCCAGGGCTGTGGCTTCAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR CCA 90 bp GATCCTGCCAGTGCTGAAGCCACAGCCCTGGAAGGCTGGCACTCTGGCCATGAAAGATGTTGTTCTGGGTaGGGGTGTCGATGCCCAAAT +
Preference number: 4 (lower is better)
Translates to: DPASAEATALEGWHSGHERCCSG*GCRCPN
Trigger: ATTTGGGCATCGACACCCCCACCCAGAACAACATCT...TTCATGGCCAGAGTGCCAGCCTTCCAGGGCTGTGGCTTCAGCACTGGCAGGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR CCA 90 bp GTTGTGGCCCTAATCCTGGCTTGGTACCCAGCACCCCCAGATCCTGCCAGTGCTTTAAAGATGTTGTTCTaGGTGGGGGTGTCGATGCCC +
Preference number: 4 (lower is better)
Translates to: VVALILAWYPAPPDPASALKMLF*VGVSMP
Trigger: GGGCATCGACACCCCCACCCAGAACAACATCTTTAA...AGCACTGGCAGGATCTGGGGGTGCTGGGTACCAAGCCAGGATTAGGGCCACAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR TCA 90 bp GTCGCCGTGGGAATAGCTTGGCACTTGCGTGTGGGATCTAATGTCTTTGGCAAGCCACGATGGACTGGTTaGCCGGCTCAATCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: VAVGIAWHLRVGSNVFGKPRWTG*PAQSGS
Trigger: AGAGCCTGATTGAGCCGGTCAACCAGTCCATCGTGG...CTTGCCAAAGACATTAGATCCCACACGCAAGTGCCAAGCTATTCCCACGGCGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR TCA 90 bp GTTGTGGCCCTAATCCTGGCTTGGTACCCAGCACCCCCAGATCCTGCCAGTGCTGAAAGCCAGCAGCACTaGTGTGAATGGTTTCCACAA +
Preference number: 4 (lower is better)
Translates to: VVALILAWYPAPPDPASAESQQH*CEWFPQ
Trigger: TTGTGGAAACCATTCACATCAGTGCTGCTGGCTTTC...AGCACTGGCAGGATCTGGGGGTGCTGGGTACCAAGCCAGGATTAGGGCCACAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR TCA 90 bp AGCTGGGATGTTGTGGCCCTAATCCTGGCTTGGTACCCAGCACCCCCAGATCCTCAGATGTCAGCATACTaGAGTGGAGACTTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: SWDVVALILAWYPAPPDPQMSAY*SGDFLQ
Trigger: CTGCAGGAAGTCTCCACTTCAGTATGCTGACATCTG...AGGATCTGGGGGTGCTGGGTACCAAGCCAGGATTAGGGCCACAACATCCCAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR GCA 90 bp GTCGCCGTGGGAATAGCTTGGCACTTGCGTGTGGGATCTAATGTCTTTGGCAAGGGCTTCTGGAACACCTaGTGCTGCTTGCCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: VAVGIAWHLRVGSNVFGKGFWNT*CCLPAL
Trigger: CAAGGCAGGCAAGCAGCAGCAGGTGTTCCAGAAGCC...CTTGCCAAAGACATTAGATCCCACACGCAAGTGCCAAGCTATTCCCACGGCGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR CCA 90 bp GTCGCCGTGGGAATAGCTTGGCACTTGCGTGTGGGATCTAATGTCTTTGGCAAGGTGAGGTCATCCAGCTaGTGCAGTGGGATCTCCCCA +
Preference number: 4 (lower is better)
Translates to: VAVGIAWHLRVGSNVFGKVRSSS*CSGISP
Trigger: TGGGGAGATCCCACTGCACCAGCTGGATGACCTCAC...CTTGCCAAAGACATTAGATCCCACACGCAAGTGCCAAGCTATTCCCACGGCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR TCA 90 bp GTCGCCGTGGGAATAGCTTGGCACTTGCGTGTGGGATCTAATGTCTTTGGCAAGCAGGAAACAGCATCGTaGGCAGGGGGTCTTGGGATT +
Preference number: 4 (lower is better)
Translates to: VAVGIAWHLRVGSNVFGKQETAS*AGGLGI
Trigger: AATCCCAAGACCCCCTGCTCACGATGCTGTTTCCTG...CTTGCCAAAGACATTAGATCCCACACGCAAGTGCCAAGCTATTCCCACGGCGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR TCA 90 bp GGCACTTGCGTGTGGGATCTAATGTCTTTGGCAAGACAGCTGGCAGGAAAAGGCCAGGAGCTGTTCCAGTaGGGCCTTGAACTTGGACAC +
Preference number: 4 (lower is better)
Translates to: GTCVWDLMSLARQLAGKGQELFQ*GLELGH
Trigger: GTGTCCAAGTTCAAGGCCTCACTGGAACAGCTCCTG...GCCTTTTCCTGCCAGCTGTCTTGCCAAAGACATTAGATCCCACACGCAAGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR TCA 90 bp TGGCACTCTGGCCATGAAGCCCTGGCTCAGGCTGGAATTTGCTTGCACGTGCAGCAAGACAGGCCATTCTaGTTCTCCACTTATGCCATG +
Preference number: 4 (lower is better)
Translates to: WHSGHEALAQAGICLHVQQDRPF*FSTYAM
Trigger: CATGGCATAAGTGGAGAATCAGAATGGCCTGTCTTG...CTGCACGTGCAAGCAAATTCCAGCCTGAGCCAGGGCTTCATGGCCAGAGTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR GCA 90 bp TGGCACTCTGGCCATGAAGCCCTGGCTCAGGCTGGAATTTGCTTGCACGTGCAGTGCTGTTCCTCAGTGTaGATGCGTTCCCAAAAGCTT +
Preference number: 4 (lower is better)
Translates to: WHSGHEALAQAGICLHVQCCSSV*MRSQKL
Trigger: AAGCTTTTGGGAACGCATGCACACTGAGGAACAGCA...CTGCACGTGCAAGCAAATTCCAGCCTGAGCCAGGGCTTCATGGCCAGAGTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR GCA 90 bp GGCCTTGTGGAAACAAAGGCACTAAAGATCACTCAGGCAGGTGGGGGTAGAAGATCCAGCCACACTGGATaGAACGGGCACACTGCTCCA +
Preference number: 4 (lower is better)
Translates to: GLVETKALKITQAGGGRRSSHTG*NGHTAP
Trigger: TGGAGCAGTGTGCCCGTTGCATCCAGTGTGGCTGGA...TCTTCTACCCCCACCTGCCTGAGTGATCTTTAGTGCCTTTGTTTCCACAAGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR CCA 90 bp GTCGCCGTGGGAATAGCTTGGCACTTGCGTGTGGGATCTAATGTCTTTGGCAAGGCTCCTGTCATCTGCTaGGCTCTGTTGAGTTGGAGC +
Preference number: 4 (lower is better)
Translates to: VAVGIAWHLRVGSNVFGKAPVIC*ALLSWS
Trigger: GCTCCAACTCAACAGAGCCCAGCAGATGACAGGAGC...CTTGCCAAAGACATTAGATCCCACACGCAAGTGCCAAGCTATTCCCACGGCGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR CCA 90 bp GGCACTTGCGTGTGGGATCTAATGTCTTTGGCAAGACAGCTGGCAGGAAAAGGCGAAAGTTCCTCTCACTaGAGGCCTGACAGGCCACAC +
Preference number: 4 (lower is better)
Translates to: GTCVWDLMSLARQLAGKGESSSH*RPDRPH
Trigger: GTGTGGCCTGTCAGGCCTCCAGTGAGAGGAACTTTC...GCCTTTTCCTGCCAGCTGTCTTGCCAAAGACATTAGATCCCACACGCAAGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR CCA 90 bp TGGCACTCTGGCCATGAAGCCCTGGCTCAGGCTGGAATTTGCTTGCACGTGCAGGGAGCCTTTCATCCTTaGTGGCTCCTTTGCAAATCT +
Preference number: 4 (lower is better)
Translates to: WHSGHEALAQAGICLHVQGAFHP*WLLCKS
Trigger: AGATTTGCAAAGGAGCCACCAAGGATGAAAGGCTCC...CTGCACGTGCAAGCAAATTCCAGCCTGAGCCAGGGCTTCATGGCCAGAGTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR CCA 90 bp GTCGCCGTGGGAATAGCTTGGCACTTGCGTGTGGGATCTAATGTCTTTGGCAAGCAGCAGCATTTTCTCTaGGAGCTGCAGCAGCAAGGC +
Preference number: 4 (lower is better)
Translates to: VAVGIAWHLRVGSNVFGKQQHFL*ELQQQG
Trigger: GCCTTGCTGCTGCAGCTCCCAGAGAAAATGCTGCTG...CTTGCCAAAGACATTAGATCCCACACGCAAGTGCCAAGCTATTCCCACGGCGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR CCA 90 bp AGCTGGGATGTTGTGGCCCTAATCCTGGCTTGGTACCCAGCACCCCCAGATCCTCCTGCCACAGTACAGTaGGATTTGTGTGTTCTTAGC +
Preference number: 4 (lower is better)
Translates to: SWDVVALILAWYPAPPDPPATVQ*DLCVLS
Trigger: GCTAAGAACACACAAATCCCACTGTACTGTGGCAGG...AGGATCTGGGGGTGCTGGGTACCAAGCCAGGATTAGGGCCACAACATCCCAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR CCA 90 bp GGCACTTGCGTGTGGGATCTAATGTCTTTGGCAAGACAGCTGGCAGGAAAAGGCTGTTTCTCCTGCTTTTaGAGCCGGTGTCGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: GTCVWDLMSLARQLAGKGCFSCF*SRCRLQ
Trigger: CTGGAGGCGACACCGGCTCCAAAAGCAGGAGAAACA...GCCTTTTCCTGCCAGCTGTCTTGCCAAAGACATTAGATCCCACACGCAAGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR CCA 90 bp GATCCTGCCAGTGCTGAAGCCACAGCCCTGGAAGGCTGGCACTCTGGCCATGAAGTCAGCATACTGAAGTaGAGACTTCCTGCAGTGAAA +
Preference number: 4 (lower is better)
Translates to: DPASAEATALEGWHSGHEVSILK*RLPAVK
Trigger: TTTCACTGCAGGAAGTCTCCACTTCAGTATGCTGAC...TTCATGGCCAGAGTGCCAGCCTTCCAGGGCTGTGGCTTCAGCACTGGCAGGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
3UTR CAA 72 bp CGTGCAGTTGGAGTCGCCGTGGGAATAGCTTGGCACTaGCGTGTGGGATCTAATGTCTTTGGCAAGACAGCT +
Preference number: 4 (lower is better)
Translates to: RAVGVAVGIAWH*RVGSNVFGKTA
Trigger: AGCTGTCTTGCCAAAGACATTAGATCCCACACGCAAGTGCCAAGCTATTCCCACGGCGACTCCAACTGCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR TCA 90 bp GCTTGGTACCCAGCACCCCCAGATCCTGCCAGTGCTGAAGCCACAGCCCTGGAAGTTTATATCTTTCTATaGAGTTCTGGTGAGAGACCC +
Preference number: 4 (lower is better)
Translates to: AWYPAPPDPASAEATALEVYIFL*SSGERP
Trigger: GGGTCTCTCACCAGAACTTCATAGAAAGATATAAAC...TTCCAGGGCTGTGGCTTCAGCACTGGCAGGATCTGGGGGTGCTGGGTACCAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR GCA 90 bp GAGCAAAGGCACTTTCTATGCAGCTGTTTTAGATGTGCCAGATGGTACCAGCTCAGGTCATCCAGCTGGTaGAGTGGGATCTCCCCACCC +
Preference number: 4 (lower is better)
Translates to: EQRHFLCSCFRCARWYQLRSSSW*SGISPP
Trigger: GGGTGGGGAGATCCCACTGCACCAGCTGGATGACCT...GAGCTGGTACCATCTGGCACATCTAAAACAGCTGCATAGAAAGTGCCTTTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020837.7
CDS-3UTR GCA 90 bp TGGCACTCTGGCCATGAAGCCCTGGCTCAGGCTGGAATTTGCTTGCACGTGCAGAATCCTCTTCCAAACTaGTTTCTGGATTGGGTAGCC +
Preference number: 4 (lower is better)
Translates to: WHSGHEALAQAGICLHVQNPLPN*FLDWVA
Trigger: GGCTACCCAATCCAGAAAGCAGTTTGGAAGAGGATT...CTGCACGTGCAAGCAAATTCCAGCCTGAGCCAGGGCTTCATGGCCAGAGTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR CCA 90 bp AGTCAAGGAAGAGGTGAGAGCAAGTGCTTCCTACAGGTTTTAGGCAGACACAGCATCCAGCTGGTGCAGTaGGATCTCCCCACCCAGGAA +
Preference number: 4 (lower is better)
Translates to: SQGRGESKCFLQVLGRHSIQLVQ*DLPTQE
Trigger: TTCCTGGGTGGGGAGATCCCACTGCACCAGCTGGAT...GCTGTGTCTGCCTAAAACCTGTAGGAAGCACTTGCTCTCACCTCTTCCTTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020837.7
CDS-3UTR CCA 90 bp TGGCACTCTGGCCATGAAGCCCTGGCTCAGGCTGGAATTTGCTTGCACGTGCAGTCTGAGTCAACAAAATaGACATTGCCAAGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: WHSGHEALAQAGICLHVQSESTK*TLPRCS
Trigger: GCTGCACCTTGGCAATGTCCATTTTGTTGACTCAGA...CTGCACGTGCAAGCAAATTCCAGCCTGAGCCAGGGCTTCATGGCCAGAGTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR TCA 90 bp CAAAGGCACTTTCTATGCAGCTGTTTTAGATGTGCCAGATGGTACCAGCTCTATCCCTTAGGTCTCCCTTaGGGGAGGCCCTACCTTCGG +
Preference number: 4 (lower is better)
Translates to: QRHFLCSCFRCARWYQLYPLGLP*GRPYLR
Trigger: CCGAAGGTAGGGCCTCCCTCAAGGGAGACCTAAGGG...ATAGAGCTGGTACCATCTGGCACATCTAAAACAGCTGCATAGAAAGTGCCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020837.7
CDS-3UTR TCA 90 bp GGCCTTGTGGAAACAAAGGCACTAAAGATCACTCAGGCAGGTGGGGGTAGAAGAGGTTGTCCTGGTAGTTaGCAAATGACCACTCCAGGC +
Preference number: 4 (lower is better)
Translates to: GLVETKALKITQAGGGRRGCPGS*QMTTPG
Trigger: GCCTGGAGTGGTCATTTGTCAACTACCAGGACAACC...TCTTCTACCCCCACCTGCCTGAGTGATCTTTAGTGCCTTTGTTTCCACAAGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR TCA 90 bp GGATGGAGCTTGAGCACAAAGATACTAAGCTGGGATGTTGTGGCCCTAATCCTGAGGAAAGTCTGTGGCTaGCTCTGGCTGTTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: GWSLSTKILSWDVVALILRKVCG*LWLLGL
Trigger: CAAGCCCAACAGCCAGAGTCAGCCACAGACTTTCCT...CAGGATTAGGGCCACAACATCCCAGCTTAGTATCTTTGTGCTCAAGCTCCATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR GCA 90 bp ACAACATTCTGGATGGAGCTTGAGCACAAAGATACTAAGCTGGGATGTTGTGGCAGGTCATCCAGCTGGTaGAGTGGGATCTCCCCACCC +
Preference number: 4 (lower is better)
Translates to: TTFWMELEHKDTKLGCCGRSSSW*SGISPP
Trigger: GGGTGGGGAGATCCCACTGCACCAGCTGGATGACCT...GCCACAACATCCCAGCTTAGTATCTTTGTGCTCAAGCTCCATCCAGAATGTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR GCA 90 bp ACAACATTCTGGATGGAGCTTGAGCACAAAGATACTAAGCTGGGATGTTGTGGCGGGTGGGGGTGTCGATaGCCAAATGGAGCATGGCCT +
Preference number: 4 (lower is better)
Translates to: TTFWMELEHKDTKLGCCGGWGCR*PNGAWP
Trigger: AGGCCATGCTCCATTTGGGCATCGACACCCCCACCC...GCCACAACATCCCAGCTTAGTATCTTTGTGCTCAAGCTCCATCCAGAATGTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR GCA 90 bp GGCCTTGTGGAAACAAAGGCACTAAAGATCACTCAGGCAGGTGGGGGTAGAAGATGGAACACCTGCTGCTaGTTGCCTGCCTTGATGGTT +
Preference number: 4 (lower is better)
Translates to: GLVETKALKITQAGGGRRWNTCC*LPALMV
Trigger: AACCATCAAGGCAGGCAAGCAGCAGCAGGTGTTCCA...TCTTCTACCCCCACCTGCCTGAGTGATCTTTAGTGCCTTTGTTTCCACAAGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR CCA 90 bp GTCGCCGTGGGAATAGCTTGGCACTTGCGTGTGGGATCTAATGTCTTTGGCAAGAACTGCTTTCTGGATTaGGTAGCCAGGAGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: VAVGIAWHLRVGSNVFGKNCFLD*VARRRQ
Trigger: CTGCCTTCTCCTGGCTACCCAATCCAGAAAGCAGTT...CTTGCCAAAGACATTAGATCCCACACGCAAGTGCCAAGCTATTCCCACGGCGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR CCA 90 bp ACAACATTCTGGATGGAGCTTGAGCACAAAGATACTAAGCTGGGATGTTGTGGCGCAGTGTGGCCTCCTTaGCACACAGAGGCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: TTFWMELEHKDTKLGCCGAVWPP*HTEAAQ
Trigger: CTGAGCAGCCTCTGTGTGCCAAGGAGGCCACACTGC...GCCACAACATCCCAGCTTAGTATCTTTGTGCTCAAGCTCCATCCAGAATGTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR CCA 90 bp GTCGCCGTGGGAATAGCTTGGCACTTGCGTGTGGGATCTAATGTCTTTGGCAAGTCCTGTTGTGGTGTCTaGACTTTGTTGCTGGGTCTG +
Preference number: 4 (lower is better)
Translates to: VAVGIAWHLRVGSNVFGKSCCGV*TLLLGL
Trigger: CAGACCCAGCAACAAAGTCCAGACACCACAACAGGA...CTTGCCAAAGACATTAGATCCCACACGCAAGTGCCAAGCTATTCCCACGGCGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR TCA 90 bp CTATGCAGCTGTTTTAGATGTGCCAGATGGTACCAGCTCTATCTAGAAAAGGGGCCACGATGGACTGGTTaGCCGGCTCAATCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: LCSCFRCARWYQLYLEKGPRWTG*PAQSGS
Trigger: AGAGCCTGATTGAGCCGGTCAACCAGTCCATCGTGG...CCCCTTTTCTAGATAGAGCTGGTACCATCTGGCACATCTAAAACAGCTGCATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000020837.7
CDS-3UTR CCA 90 bp GGATGGAGCTTGAGCACAAAGATACTAAGCTGGGATGTTGTGGCCCTAATCCTGGGAGCATGGCCTCTCTaGTCACCTCGAAACAATCCT +
Preference number: 4 (lower is better)
Translates to: GWSLSTKILSWDVVALILGAWPL*SPRNNP
Trigger: AGGATTGTTTCGAGGTGACCAGAGAGGCCATGCTCC...CAGGATTAGGGCCACAACATCCCAGCTTAGTATCTTTGTGCTCAAGCTCCATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR TCA 90 bp GTCGCCGTGGGAATAGCTTGGCACTTGCGTGTGGGATCTAATGTCTTTGGCAAGTATGAAGGCAGTCCATaGTTTGGAGTCTGCACAGAT +
Preference number: 4 (lower is better)
Translates to: VAVGIAWHLRVGSNVFGKYEGSP*FGVCTD
Trigger: ATCTGTGCAGACTCCAAATCATGGACTGCCTTCATA...CTTGCCAAAGACATTAGATCCCACACGCAAGTGCCAAGCTATTCCCACGGCGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR TCA 90 bp GGATGGAGCTTGAGCACAAAGATACTAAGCTGGGATGTTGTGGCCCTAATCCTGGCATGGAGTCAGTCATaGAGATCTTTGTCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: GWSLSTKILSWDVVALILAWSQS*RSLSCH
Trigger: GTGGCAGGACAAAGATCTTCATGACTGACTCCATGC...CAGGATTAGGGCCACAACATCCCAGCTTAGTATCTTTGTGCTCAAGCTCCATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR CCA 90 bp GTCTTCTACAAGAGCAATAAATGCTTTGAACCACTGAGTTCTCTCTTCAGCCCCGTGAGGTCATCCAGCTaGTGCAGTGGGATCTCCCCA +
Preference number: 4 (lower is better)
Translates to: VFYKSNKCFEPLSSLFSPVRSSS*CSGISP
Trigger: TGGGGAGATCCCACTGCACCAGCTGGATGACCTCAC...GGGGCTGAAGAGAGAACTCAGTGGTTCAAAGCATTTATTGCTCTTGTAGAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020837.7
3UTR CAA 72 bp TGCCAGATGGTACCAGCTCTATCTAGAAAAGGGGTTTaGCAGATGCTAGGCTCTAGCACCAAGCTTATCCCC +
Preference number: 4 (lower is better)
Translates to: CQMVPALSRKGV*QMLGSSTKLIP
Trigger: GGGGATAAGCTTGGTGCTAGAGCCTAGCATCTGCAAAACCCCTTTTCTAGATAGAGCTGGTACCATCTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020837.7
CDS-3UTR TCA 90 bp ACAACATTCTGGATGGAGCTTGAGCACAAAGATACTAAGCTGGGATGTTGTGGCCTGTTGAGTTGGAGCTaGATGAACTTCCCGAAGCGG +
Preference number: 4 (lower is better)
Translates to: TTFWMELEHKDTKLGCCGLLSWS*MNFPKR
Trigger: CCGCTTCGGGAAGTTCATTCAGCTCCAACTCAACAG...GCCACAACATCCCAGCTTAGTATCTTTGTGCTCAAGCTCCATCCAGAATGTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR TCA 90 bp GGCCTTGTGGAAACAAAGGCACTAAAGATCACTCAGGCAGGTGGGGGTAGAAGACAGGGCTTCATCCTCTaGGTCAACAAAATGGACATT +
Preference number: 4 (lower is better)
Translates to: GLVETKALKITQAGGGRRQGFIL*VNKMDI
Trigger: AATGTCCATTTTGTTGACTCAGAGGATGAAGCCCTG...TCTTCTACCCCCACCTGCCTGAGTGATCTTTAGTGCCTTTGTTTCCACAAGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR TCA 90 bp GGCCTTGTGGAAACAAAGGCACTAAAGATCACTCAGGCAGGTGGGGGTAGAAGATCTCATTGGCATAGTTaGTGCACAGCTGTTCCAAAC +
Preference number: 4 (lower is better)
Translates to: GLVETKALKITQAGGGRRSHWHS*CTAVPN
Trigger: GTTTGGAACAGCTGTGCATCAACTATGCCAATGAGA...TCTTCTACCCCCACCTGCCTGAGTGATCTTTAGTGCCTTTGTTTCCACAAGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR TCA 90 bp ACAACATTCTGGATGGAGCTTGAGCACAAAGATACTAAGCTGGGATGTTGTGGCCCAGCAGCACTGATGTaGATGGTTTCCACAAGGCCA +
Preference number: 4 (lower is better)
Translates to: TTFWMELEHKDTKLGCCGPAALM*MVSTRP
Trigger: TGGCCTTGTGGAAACCATTCACATCAGTGCTGCTGG...GCCACAACATCCCAGCTTAGTATCTTTGTGCTCAAGCTCCATCCAGAATGTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR GCA 90 bp CAAAGGCACTTTCTATGCAGCTGTTTTAGATGTGCCAGATGGTACCAGCTCTATTCTGTGTATCGGGCCTaGAGGCACCTCAGGACTGTT +
Preference number: 4 (lower is better)
Translates to: QRHFLCSCFRCARWYQLYSVYRA*RHLRTV
Trigger: AACAGTCCTGAGGTGCCTGCAGGCCCGATACACAGA...ATAGAGCTGGTACCATCTGGCACATCTAAAACAGCTGCATAGAAAGTGCCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020837.7
CDS-3UTR GCA 90 bp GGATGGAGCTTGAGCACAAAGATACTAAGCTGGGATGTTGTGGCCCTAATCCTGTTTCTGAGGCTGAGGTaGAGCATGGTACTCTTGCAT +
Preference number: 4 (lower is better)
Translates to: GWSLSTKILSWDVVALILFLRLR*SMVLLH
Trigger: ATGCAAGAGTACCATGCTGCACCTCAGCCTCAGAAA...CAGGATTAGGGCCACAACATCCCAGCTTAGTATCTTTGTGCTCAAGCTCCATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR CCA 90 bp ACAACATTCTGGATGGAGCTTGAGCACAAAGATACTAAGCTGGGATGTTGTGGCCCGGGTCACTGGGAGTaGCTGCTGTCTGAATTAAAG +
Preference number: 4 (lower is better)
Translates to: TTFWMELEHKDTKLGCCGPGHWE*LLSELK
Trigger: CTTTAATTCAGACAGCAGCCACTCCCAGTGACCCGG...GCCACAACATCCCAGCTTAGTATCTTTGTGCTCAAGCTCCATCCAGAATGTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR TCA 90 bp ATCCATCTTGCTGTAGTGACAACATTCTGGATGGAGCTTGAGCACAAAGATACTAGTAACACAGGAGGCTaGAGGGTCAGGGCAGATGTC +
Preference number: 4 (lower is better)
Translates to: IHLAVVTTFWMELEHKDTSNTGG*RVRADV
Trigger: GACATCTGCCCTGACCCTTCAGCCTCCTGTGTTACT...AGTATCTTTGTGCTCAAGCTCCATCCAGAATGTTGTCACTACAGCAAGATGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR GCA 90 bp GAGCAAAGGCACTTTCTATGCAGCTGTTTTAGATGTGCCAGATGGTACCAGCTCTTTCTGAGGCTGAGGTaGAGCATGGTACTCTTGCAT +
Preference number: 4 (lower is better)
Translates to: EQRHFLCSCFRCARWYQLFLRLR*SMVLLH
Trigger: ATGCAAGAGTACCATGCTGCACCTCAGCCTCAGAAA...GAGCTGGTACCATCTGGCACATCTAAAACAGCTGCATAGAAAGTGCCTTTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020837.7
CDS-3UTR CCA 90 bp ATCCATCTTGCTGTAGTGACAACATTCTGGATGGAGCTTGAGCACAAAGATACTCCCAGGGGCCAGAGATaGATTATTGCTCCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: IHLAVVTTFWMELEHKDTPRGQR*IIAPRN
Trigger: GTTCCTGGGAGCAATAATCCATCTCTGGCCCCTGGG...AGTATCTTTGTGCTCAAGCTCCATCCAGAATGTTGTCACTACAGCAAGATGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR TCA 90 bp GGATGGAGCTTGAGCACAAAGATACTAAGCTGGGATGTTGTGGCCCTAATCCTGTTTGTTCACCCACTGTaGAGATGTGGGGTTTCAATT +
Preference number: 4 (lower is better)
Translates to: GWSLSTKILSWDVVALILFVHPL*RCGVSI
Trigger: AATTGAAACCCCACATCTTCACAGTGGGTGAACAAA...CAGGATTAGGGCCACAACATCCCAGCTTAGTATCTTTGTGCTCAAGCTCCATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR TCA 90 bp GAGCAAAGGCACTTTCTATGCAGCTGTTTTAGATGTGCCAGATGGTACCAGCTCTTTGTTCACCCACTGTaGAGATGTGGGGTTTCAATT +
Preference number: 4 (lower is better)
Translates to: EQRHFLCSCFRCARWYQLFVHPL*RCGVSI
Trigger: AATTGAAACCCCACATCTTCACAGTGGGTGAACAAA...GAGCTGGTACCATCTGGCACATCTAAAACAGCTGCATAGAAAGTGCCTTTGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020837.7
CDS-3UTR TCA 90 bp CAGGTCTTCTACAAGAGCAATAAATGCTTTGAACCACTGAGTTCTCTCTTCAGCGCAGTGCAAGGACACTaGGCTTACCAAAAGCTTCCA +
Preference number: 4 (lower is better)
Translates to: QVFYKSNKCFEPLSSLFSAVQGH*AYQKLP
Trigger: TGGAAGCTTTTGGTAAGCTCAGTGTCCTTGCACTGC...GCTGAAGAGAGAACTCAGTGGTTCAAAGCATTTATTGCTCTTGTAGAAGACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020837.7
CDS-3UTR GCA 90 bp CAAAGGCACTTTCTATGCAGCTGTTTTAGATGTGCCAGATGGTACCAGCTCTATTTGCATCAGTTCTGGTaGATAGAGTTGAGGGACGTG +
Preference number: 4 (lower is better)
Translates to: QRHFLCSCFRCARWYQLYLHQFW*IELRDV
Trigger: CACGTCCCTCAACTCTATGCACCAGAACTGATGCAA...ATAGAGCTGGTACCATCTGGCACATCTAAAACAGCTGCATAGAAAGTGCCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020837.7
CDS-3UTR CCA 90 bp CAGGTCTTCTACAAGAGCAATAAATGCTTTGAACCACTGAGTTCTCTCTTCAGCCTTCCATCACAGGGTTaGAGTTCAGAATCCGCTGTT +
Preference number: 4 (lower is better)
Translates to: QVFYKSNKCFEPLSSLFSLPSQG*SSESAV
Trigger: AACAGCGGATTCTGAACTCCAACCCTGTGATGGAAG...GCTGAAGAGAGAACTCAGTGGTTCAAAGCATTTATTGCTCTTGTAGAAGACCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020837.7
CDS-3UTR TCA 90 bp GTCTTCTACAAGAGCAATAAATGCTTTGAACCACTGAGTTCTCTCTTCAGCCCCGCTCAATCAGGCTCTTaGCATTTCTATAGGTTTGTT +
Preference number: 4 (lower is better)
Translates to: VFYKSNKCFEPLSSLFSPAQSGS*HFYRFV
Trigger: AACAAACCTATAGAAATGTCAAGAGCCTGATTGAGC...GGGGCTGAAGAGAGAACTCAGTGGTTCAAAGCATTTATTGCTCTTGTAGAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020837.7
CDS-3UTR TCA 90 bp ATCCATCTTGCTGTAGTGACAACATTCTGGATGGAGCTTGAGCACAAAGATACTCTATGTGTAACCTTCTaGTGTGTTTCCGAGTTAACC +
Preference number: 4 (lower is better)
Translates to: IHLAVVTTFWMELEHKDTLCVTF*CVSELT
Trigger: GGTTAACTCGGAAACACATCAGAAGGTTACACATAG...AGTATCTTTGTGCTCAAGCTCCATCCAGAATGTTGTCACTACAGCAAGATGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR CCA 90 bp CAAAGGCACTTTCTATGCAGCTGTTTTAGATGTGCCAGATGGTACCAGCTCTATAGGTACAGCCAGCATTaGTATAGAATATGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: QRHFLCSCFRCARWYQLYRYSQH*YRICLL
Trigger: CAGAAGACATATTCTATACCAATGCTGGCTGTACCT...ATAGAGCTGGTACCATCTGGCACATCTAAAACAGCTGCATAGAAAGTGCCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020837.7
CDS-3UTR CAA 90 bp GCCAGTGCTGAAGCCACAGCCCTGGAAGGCTGGCACTCTGGCCATGAAGCCCTGGGCTCCCGGCTGAGCTaGTTATGGCCCAGGCAGGGC +
Preference number: 5 (lower is better)
Translates to: ASAEATALEGWHSGHEALGSRLS*LWPRQG
Trigger: GCCCTGCCTGGGCCATAACAAGCTCAGCCGGGAGCC...CAGGGCTTCATGGCCAGAGTGCCAGCCTTCCAGGGCTGTGGCTTCAGCACTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS TCA 90 bp GTACAGGTCCCGCGAAATGCACAACCACGAAGCTGGGCTCCCGGCTaGGCTTGTTATGGCCCAGGCAGGGCCGTCCTGCCAGCGTGCTCT +
Preference number: 5 (lower is better)
Translates to: VQVPRNAQPRSWAPG*ACYGPGRAVLPACS
Trigger: AGAGCACGCTGGCAGGACGGCCCTGCCTGGGCCATAACAAGCTCAGCCGGGAGCCCAGCTTCGTGGTTGTGCATTTCGCGGGACCTGTAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS CCA 90 bp GCAGCCTGGATGAGCACGGCAGCCCGCCTCTGTTTCTCCTGCTTTTaGAGCCGGTGTCGCCTCCAGCCACACTGGATGCAACGGGCACAC +
Preference number: 5 (lower is better)
Translates to: AAWMSTAARLCFSCF*SRCRLQPHWMQRAH
Trigger: GTGTGCCCGTTGCATCCAGTGTGGCTGGAGGCGACACCGGCTCCAAAAGCAGGAGAAACAGAGGCGGGCTGCCGTGCTCATCCAGGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS GCA 90 bp TGGAGCCGGTGTCGCCTCCAGCCACACTGGATGCAACGGGCACACTaGTCCAGCATCTGGGCACGCCCACATTCCAGAAGCTCTAGCATG +
Preference number: 5 (lower is better)
Translates to: WSRCRLQPHWMQRAH*SSIWARPHSRSSSM
Trigger: CATGCTAGAGCTTCTGGAATGTGGGCGTGCCCAGATGCTGGAGCAGTGTGCCCGTTGCATCCAGTGTGGCTGGAGGCGACACCGGCTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR CAA 90 bp GCCAGTGCTGAAGCCACAGCCCTGGAAGGCTGGCACTCTGGCCATGAAGCCCTGACCACGATGGACTGGTaGACCGGCTCAATCAGGCTC +
Preference number: 5 (lower is better)
Translates to: ASAEATALEGWHSGHEALTTMDW*TGSIRL
Trigger: GAGCCTGATTGAGCCGGTCAACCAGTCCATCGTGGT...CAGGGCTTCATGGCCAGAGTGCCAGCCTTCCAGGGCTGTGGCTTCAGCACTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR CAA 90 bp TGGCTTGGTACCCAGCACCCCCAGATCCTGCCAGTGCTGAAGCCACAGCCCTGGCTGTTTCTCCTGCTTTaGGAGCCGGTGTCGCCTCCA +
Preference number: 5 (lower is better)
Translates to: WLGTQHPQILPVLKPQPWLFLLL*EPVSPP
Trigger: TGGAGGCGACACCGGCTCCAAAAGCAGGAGAAACAG...CCAGGGCTGTGGCTTCAGCACTGGCAGGATCTGGGGGTGCTGGGTACCAAGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS GCA 90 bp TTTTCCACCAGGCCGGCTGTGTGGTACCGTACAGGTCCCGCGAAATaGACAACCACGAAGCTGGGCTCCCGGCTGAGCTTGTTATGGCCC +
Preference number: 5 (lower is better)
Translates to: FSTRPAVWYRTGPAK*TTTKLGSRLSLLWP
Trigger: GGGCCATAACAAGCTCAGCCGGGAGCCCAGCTTCGTGGTTGTGCATTTCGCGGGACCTGTACGGTACCACACAGCCGGCCTGGTGGAAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS GCA 90 bp GTTTCTCCTGCTTTTGGAGCCGGTGTCGCCTCCAGCCACACTGGATaGAACGGGCACACTGCTCCAGCATCTGGGCACGCCCACATTCCA +
Preference number: 5 (lower is better)
Translates to: VSPAFGAGVASSHTG*NGHTAPASGHAHIP
Trigger: TGGAATGTGGGCGTGCCCAGATGCTGGAGCAGTGTGCCCGTTGCATCCAGTGTGGCTGGAGGCGACACCGGCTCCAAAAGCAGGAGAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS GCA 90 bp CTAAAAGCAGCCTGGATGAGCACGGCAGCCCGCCTCTGTTTCTCCTaGTTTTGGAGCCGGTGTCGCCTCCAGCCACACTGGATGCAACGG +
Preference number: 5 (lower is better)
Translates to: LKAAWMSTAARLCFS*FWSRCRLQPHWMQR
Trigger: CCGTTGCATCCAGTGTGGCTGGAGGCGACACCGGCTCCAAAAGCAGGAGAAACAGAGGCGGGCTGCCGTGCTCATCCAGGCTGCTTTTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS CCA 90 bp CTCTGTTTCTCCTGCTTTTGGAGCCGGTGTCGCCTCCAGCCACACTaGATGCAACGGGCACACTGCTCCAGCATCTGGGCACGCCCACAT +
Preference number: 5 (lower is better)
Translates to: LCFSCFWSRCRLQPH*MQRAHCSSIWARPH
Trigger: ATGTGGGCGTGCCCAGATGCTGGAGCAGTGTGCCCGTTGCATCCAGTGTGGCTGGAGGCGACACCGGCTCCAAAAGCAGGAGAAACAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS CCA 90 bp CAGGGGCCAGAGATGGATTATTGCTCCCAGGAACCTAGTGTGTGCTaGGGACATCGAGGACCGCAGGGTACCAGGAGCCTGAGGCATGGG +
Preference number: 5 (lower is better)
Translates to: QGPEMDYCSQEPSVC*GHRGPQGTRSLRHG
Trigger: CCCATGCCTCAGGCTCCTGGTACCCTGCGGTCCTCGATGTCCCCAGCACACACTAGGTTCCTGGGAGCAATAATCCATCTCTGGCCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR CAA 90 bp TGGCACTCTGGCCATGAAGCCCTGGCTCAGGCTGGAATTTGCTTGCACGTGCAGCGTGAGCAGGGGGTCTaGGGATTGCTGCAGGAGCTC +
Preference number: 5 (lower is better)
Translates to: WHSGHEALAQAGICLHVQREQGV*GLLQEL
Trigger: GAGCTCCTGCAGCAATCCCAAGACCCCCTGCTCACG...CTGCACGTGCAAGCAAATTCCAGCCTGAGCCAGGGCTTCATGGCCAGAGTGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS GCA 90 bp TCCCAGGGGCCAGAGATGGATTATTGCTCCCAGGAACCTAGTGTGTaGTGGGGACATCGAGGACCGCAGGGTACCAGGAGCCTGAGGCAT +
Preference number: 5 (lower is better)
Translates to: SQGPEMDYCSQEPSV*WGHRGPQGTRSLRH
Trigger: ATGCCTCAGGCTCCTGGTACCCTGCGGTCCTCGATGTCCCCAGCACACACTAGGTTCCTGGGAGCAATAATCCATCTCTGGCCCCTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS CCA 90 bp TCAGGGGGAACAGGGTCCTTGTTCTTTTCCACCAGGCCGGCTGTGTaGTACCGTACAGGTCCCGCGAAATGCACAACCACGAAGCTGGGC +
Preference number: 5 (lower is better)
Translates to: SGGTGSLFFSTRPAV*YRTGPAKCTTTKLG
Trigger: GCCCAGCTTCGTGGTTGTGCATTTCGCGGGACCTGTACGGTACCACACAGCCGGCCTGGTGGAAAAGAACAAGGACCCTGTTCCCCCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS CCA 90 bp GAGCATGGAGAATGTCCTGTAGTAGAGGTTGCAGTGTGGCCTCCTTaGCACACAGAGGCTGCTCAGAGGACCCTTCGGCAGGCTCCAGGC +
Preference number: 5 (lower is better)
Translates to: EHGECPVVEVAVWPP*HTEAAQRTLRQAPG
Trigger: GCCTGGAGCCTGCCGAAGGGTCCTCTGAGCAGCCTCTGTGTGCCAAGGAGGCCACACTGCAACCTCTACTACAGGACATTCTCCATGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS CCA 90 bp CGCCTCCAGCCACACTGGATGCAACGGGCACACTGCTCCAGCATCTaGGCACGCCCACATTCCAGAAGCTCTAGCATGGAGTCAGTCATG +
Preference number: 5 (lower is better)
Translates to: RLQPHWMQRAHCSSI*ARPHSRSSSMESVM
Trigger: CATGACTGACTCCATGCTAGAGCTTCTGGAATGTGGGCGTGCCCAGATGCTGGAGCAGTGTGCCCGTTGCATCCAGTGTGGCTGGAGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR CAA 90 bp AGCTGGGATGTTGTGGCCCTAATCCTGGCTTGGTACCCAGCACCCCCAGATCCTCAGGGGGTCTTGGGATaGCTGCAGGAGCTCAGTCAG +
Preference number: 5 (lower is better)
Translates to: SWDVVALILAWYPAPPDPQGVLG*LQELSQ
Trigger: CTGACTGAGCTCCTGCAGCAATCCCAAGACCCCCTG...AGGATCTGGGGGTGCTGGGTACCAAGCCAGGATTAGGGCCACAACATCCCAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS TCA 90 bp GCAGGCACCTCAGGACTGTTTCCAGTGTCACGGGATTCACCTTGGTaGGGTCATCCAGCTGGTGCAGTGGGATCTCCCCACCCAGGAACT +
Preference number: 5 (lower is better)
Translates to: AGTSGLFPVSRDSPW*GHPAGAVGSPHPGT
Trigger: AGTTCCTGGGTGGGGAGATCCCACTGCACCAGCTGGATGACCTCACCAAGGTGAATCCCGTGACACTGGAAACAGTCCTGAGGTGCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020837.7
ENSMUST00000093969.11
CDS TCA 90 bp GCTCCTCCTGGGTCTTCTCTTCAGGGTTGGCAGGAAACAGCATCGTaGGCAGGGGGTCTTGGGATTGCTGCAGGAGCTCAGTCAGCTCAG +
Preference number: 5 (lower is better)
Translates to: APPGSSLQGWQETAS*AGGLGIAAGAQSAQ
Trigger: CTGAGCTGACTGAGCTCCTGCAGCAATCCCAAGACCCCCTGCTCACGATGCTGTTTCCTGCCAACCCTGAAGAGAAGACCCAGGAGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS GCA 90 bp GTGTCACACTCGGCTCGGGAGCAGGGCTTCTGGAACACCTGCTGCTaGTTGCCTGCCTTGATGGTTCGAATCTGCATACTCTCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: VSHSAREQGFWNTCC*LPALMVRICILSSS
Trigger: GCTGCTGGAGAGTATGCAGATTCGAACCATCAAGGCAGGCAAGCAGCAGCAGGTGTTCCAGAAGCCCTGCTCCCGAGCCGAGTGTGACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS GCA 90 bp CTGCGTGTGTCACACTCGGCTCGGGAGCAGGGCTTCTGGAACACCTaGTGCTGCTTGCCTGCCTTGATGGTTCGAATCTGCATACTCTCC +
Preference number: 5 (lower is better)
Translates to: LRVSHSAREQGFWNT*CCLPALMVRICILS
Trigger: GGAGAGTATGCAGATTCGAACCATCAAGGCAGGCAAGCAGCAGCAGGTGTTCCAGAAGCCCTGCTCCCGAGCCGAGTGTGACACACGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS GCA 90 bp TCAGGGTTGGCAGGAAACAGCATCGTGAGCAGGGGGTCTTGGGATTaGTGCAGGAGCTCAGTCAGCTCAGGGGGAACAGGGTCCTTGTTC +
Preference number: 5 (lower is better)
Translates to: SGLAGNSIVSRGSWD*CRSSVSSGGTGSLF
Trigger: GAACAAGGACCCTGTTCCCCCTGAGCTGACTGAGCTCCTGCAGCAATCCCAAGACCCCCTGCTCACGATGCTGTTTCCTGCCAACCCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS GCA 90 bp GTTTCCAGTGTCACGGGATTCACCTTGGTGAGGTCATCCAGCTGGTaGAGTGGGATCTCCCCACCCAGGAACTCCCTTAGGTCTCCCTTG +
Preference number: 5 (lower is better)
Translates to: VSSVTGFTLVRSSSW*SGISPPRNSLRSPL
Trigger: CAAGGGAGACCTAAGGGAGTTCCTGGGTGGGGAGATCCCACTGCACCAGCTGGATGACCTCACCAAGGTGAATCCCGTGACACTGGAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020837.7
ENSMUST00000093969.11
CDS GCA 90 bp GGGTTGGCAGGAAACAGCATCGTGAGCAGGGGGTCTTGGGATTGCTaGAGGAGCTCAGTCAGCTCAGGGGGAACAGGGTCCTTGTTCTTT +
Preference number: 5 (lower is better)
Translates to: GLAGNSIVSRGSWDC*RSSVSSGGTGSLFF
Trigger: AAAGAACAAGGACCCTGTTCCCCCTGAGCTGACTGAGCTCCTGCAGCAATCCCAAGACCCCCTGCTCACGATGCTGTTTCCTGCCAACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS CCA 90 bp ACTGTTTCCAGTGTCACGGGATTCACCTTGGTGAGGTCATCCAGCTaGTGCAGTGGGATCTCCCCACCCAGGAACTCCCTTAGGTCTCCC +
Preference number: 5 (lower is better)
Translates to: TVSSVTGFTLVRSSS*CSGISPPRNSLRSP
Trigger: GGGAGACCTAAGGGAGTTCCTGGGTGGGGAGATCCCACTGCACCAGCTGGATGACCTCACCAAGGTGAATCCCGTGACACTGGAAACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020837.7
ENSMUST00000093969.11
CDS CCA 90 bp ACGCCATCAGCTGAGTTGGCTAGCACCAGTCCCAGGGGCCAGAGATaGATTATTGCTCCCAGGAACCTAGTGTGTGCTGGGGACATCGAG +
Preference number: 5 (lower is better)
Translates to: TPSAELASTSPRGQR*IIAPRNLVCAGDIE
Trigger: CTCGATGTCCCCAGCACACACTAGGTTCCTGGGAGCAATAATCCATCTCTGGCCCCTGGGACTGGTGCTAGCCAACTCAGCTGATGGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR CAA 90 bp TGGCTTGGTACCCAGCACCCCCAGATCCTGCCAGTGCTGAAGCCACAGCCCTGGTCAACAAAATGGACATaGCCAAGGTGCAGCAGTCCA +
Preference number: 5 (lower is better)
Translates to: WLGTQHPQILPVLKPQPWSTKWT*PRCSSP
Trigger: TGGACTGCTGCACCTTGGCAATGTCCATTTTGTTGA...CCAGGGCTGTGGCTTCAGCACTGGCAGGATCTGGGGGTGCTGGGTACCAAGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR CAA 90 bp TGGCACTCTGGCCATGAAGCCCTGGCTCAGGCTGGAATTTGCTTGCACGTGCAGGCACAGATGCTGCTGTaGATCACAGACACCAGCCAG +
Preference number: 5 (lower is better)
Translates to: WHSGHEALAQAGICLHVQAQMLL*ITDTSQ
Trigger: CTGGCTGGTGTCTGTGATCAACAGCAGCATCTGTGC...CTGCACGTGCAAGCAAATTCCAGCCTGAGCCAGGGCTTCATGGCCAGAGTGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR CAA 90 bp AGCTGGGATGTTGTGGCCCTAATCCTGGCTTGGTACCCAGCACCCCCAGATCCTGGTGTCTGGACTTTGTaGCTGGGTCTGTCTGAGGGA +
Preference number: 5 (lower is better)
Translates to: SWDVVALILAWYPAPPDPGVWTL*LGLSEG
Trigger: TCCCTCAGACAGACCCAGCAACAAAGTCCAGACACC...AGGATCTGGGGGTGCTGGGTACCAAGCCAGGATTAGGGCCACAACATCCCAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR CAA 90 bp GTTGTGGCCCTAATCCTGGCTTGGTACCCAGCACCCCCAGATCCTGCCAGTGCTTGTGGTGTCTGGACTTaGTTGCTGGGTCTGTCTGAG +
Preference number: 5 (lower is better)
Translates to: VVALILAWYPAPPDPASACGVWT*LLGLSE
Trigger: CTCAGACAGACCCAGCAACAAAGTCCAGACACCACA...AGCACTGGCAGGATCTGGGGGTGCTGGGTACCAAGCCAGGATTAGGGCCACAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS TCA 90 bp CTAGTGTGTGCTGGGGACATCGAGGACCGCAGGGTACCAGGAGCCTaGGGCATGGGTTTCTCCTCCATACCATCCAGTTCTTTAGAGGCA +
Preference number: 5 (lower is better)
Translates to: LVCAGDIEDRRVPGA*GMGFSSIPSSSLEA
Trigger: TGCCTCTAAAGAACTGGATGGTATGGAGGAGAAACCCATGCCTCAGGCTCCTGGTACCCTGCGGTCCTCGATGTCCCCAGCACACACTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS CCA 90 bp TCTCTGGGAGCTGCAGCAGCAAGGCTGAGGTCCTCACAGAGACCTTaGTATCATCCATCACTTGGCAGGGCAGGGCTTCATCCTCTGAGT +
Preference number: 5 (lower is better)
Translates to: SLGAAAARLRSSQRP*YHPSLGRAGLHPLS
Trigger: ACTCAGAGGATGAAGCCCTGCCCTGCCAAGTGATGGATGATACCAAGGTCTCTGTGAGGACCTCAGCCTTGCTGCTGCAGCTCCCAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS CCA 90 bp GGGCTACCAGTTTCCTCTGAAAGCCACGTACGCCATCAGCTGAGTTaGCTAGCACCAGTCCCAGGGGCCAGAGATGGATTATTGCTCCCA +
Preference number: 5 (lower is better)
Translates to: GLPVSSESHVRHQLS*LAPVPGARDGLLLP
Trigger: TGGGAGCAATAATCCATCTCTGGCCCCTGGGACTGGTGCTAGCCAACTCAGCTGATGGCGTACGTGGCTTTCAGAGGAAACTGGTAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR CAA 90 bp GCCAGTGCTGAAGCCACAGCCCTGGAAGGCTGGCACTCTGGCCATGAAGCCCTGGAATGTAGTGGGGTGTaGTATTATGTAGGACCTGCA +
Preference number: 5 (lower is better)
Translates to: ASAEATALEGWHSGHEALECSGV*YYVGPA
Trigger: TGCAGGTCCTACATAATACAACACCCCACTACATTC...CAGGGCTTCATGGCCAGAGTGCCAGCCTTCCAGGGCTGTGGCTTCAGCACTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS TCA 90 bp AGCCTGATCCTGTTGTGGTGTCTGGACTTTGTTGCTGGGTCTGTCTaGGGGAAGCCGAAGGCAGGCATGGGCTACCAGTTTCCTCTGAAA +
Preference number: 5 (lower is better)
Translates to: SLILLWCLDFVAGSV*GKPKAGMGYQFPLK
Trigger: TTTCAGAGGAAACTGGTAGCCCATGCCTGCCTTCGGCTTCCCTCAGACAGACCCAGCAACAAAGTCCAGACACCACAACAGGATCAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR CAA 90 bp GGCACTTGCGTGTGGGATCTAATGTCTTTGGCAAGACAGCTGGCAGGAAAAGGCCTCAGGGAGGTGCCATaGGAGCCTTTCATCCTTGGT +
Preference number: 5 (lower is better)
Translates to: GTCVWDLMSLARQLAGKGLREVP*EPFILG
Trigger: ACCAAGGATGAAAGGCTCCAATGGCACCTCCCTGAG...GCCTTTTCCTGCCAGCTGTCTTGCCAAAGACATTAGATCCCACACGCAAGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR CAA 90 bp GGATGGAGCTTGAGCACAAAGATACTAAGCTGGGATGTTGTGGCCCTAATCCTGTGCAGTGTGGCCTCCTaGGCACACAGAGGCTGCTCA +
Preference number: 5 (lower is better)
Translates to: GWSLSTKILSWDVVALILCSVAS*AHRGCS
Trigger: TGAGCAGCCTCTGTGTGCCAAGGAGGCCACACTGCA...CAGGATTAGGGCCACAACATCCCAGCTTAGTATCTTTGTGCTCAAGCTCCATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS CCA 90 bp TGTTCTGGGTGGGGGTGTCGATGCCCAAATGGAGCATGGCCTCTCTaGTCACCTCGAAACAATCCTCTTCCAAACTGCTTTCTGGATTGG +
Preference number: 5 (lower is better)
Translates to: CSGWGCRCPNGAWPL*SPRNNPLPNCFLDW
Trigger: CCAATCCAGAAAGCAGTTTGGAAGAGGATTGTTTCGAGGTGACCAGAGAGGCCATGCTCCATTTGGGCATCGACACCCCCACCCAGAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS CCA 90 bp AACCTTCTGATGTGTTTCCGAGTTAACCAGGACCTAAAAGCAGCCTaGATGAGCACGGCAGCCCGCCTCTGTTTCTCCTGCTTTTGGAGC +
Preference number: 5 (lower is better)
Translates to: NLLMCFRVNQDLKAA*MSTAARLCFSCFWS
Trigger: GCTCCAAAAGCAGGAGAAACAGAGGCGGGCTGCCGTGCTCATCCAGGCTGCTTTTAGGTCCTGGTTAACTCGGAAACACATCAGAAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR CAA 90 bp GTCGCCGTGGGAATAGCTTGGCACTTGCGTGTGGGATCTAATGTCTTTGGCAAGCTGGGCTCTGTTGAGTaGGAGCTGAATGAACTTCCC +
Preference number: 5 (lower is better)
Translates to: VAVGIAWHLRVGSNVFGKLGSVE*ELNELP
Trigger: GGGAAGTTCATTCAGCTCCAACTCAACAGAGCCCAG...CTTGCCAAAGACATTAGATCCCACACGCAAGTGCCAAGCTATTCCCACGGCGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR CAA 90 bp ACAACATTCTGGATGGAGCTTGAGCACAAAGATACTAAGCTGGGATGTTGTGGCGGGGGAACAGGGTCCTaGTTCTTTTCCACCAGGCCG +
Preference number: 5 (lower is better)
Translates to: TTFWMELEHKDTKLGCCGGGTGS*FFSTRP
Trigger: CGGCCTGGTGGAAAAGAACAAGGACCCTGTTCCCCC...GCCACAACATCCCAGCTTAGTATCTTTGTGCTCAAGCTCCATCCAGAATGTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS TCA 90 bp CTGTTCAATCCTCTCTGCAATCTTATGGTTCTCACAGGAAGTCGGTaGGGCAGCCACCACCGCATAGAACTTCATCAGGCATCGGGATGT +
Preference number: 5 (lower is better)
Translates to: LFNPLCNLMVLTGSR*GSHHRIELHQASGC
Trigger: ACATCCCGATGCCTGATGAAGTTCTATGCGGTGGTGGCTGCCTCACCGACTTCCTGTGAGAACCATAAGATTGCAGAGAGGATTGAACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020837.7
ENSMUST00000093969.11
CDS TCA 90 bp GGGATTTGTGTGTTCTTAGCCGGGTCACTGGGAGTGGCTGCTGTCTaGATTAAAGCTGGCAGAGCATGGAGAATGTCCTGTAGTAGAGGT +
Preference number: 5 (lower is better)
Translates to: GICVFLAGSLGVAAV*IKAGRAWRMSCSRG
Trigger: ACCTCTACTACAGGACATTCTCCATGCTCTGCCAGCTTTAATTCAGACAGCAGCCACTCCCAGTGACCCGGCTAAGAACACACAAATCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS CCA 90 bp AGGACCTTAAAGATGTTGTTCTGGGTGGGGGTGTCGATGCCCAAATaGAGCATGGCCTCTCTGGTCACCTCGAAACAATCCTCTTCCAAA +
Preference number: 5 (lower is better)
Translates to: RTLKMLFWVGVSMPK*SMASLVTSKQSSSK
Trigger: TTTGGAAGAGGATTGTTTCGAGGTGACCAGAGAGGCCATGCTCCATTTGGGCATCGACACCCCCACCCAGAACAACATCTTTAAGGTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS CCA 90 bp TCCATCACTTGGCAGGGCAGGGCTTCATCCTCTGAGTCAACAAAATaGACATTGCCAAGGTGCAGCAGTCCAGCTAGGACCTTAAAGATG +
Preference number: 5 (lower is better)
Translates to: SITWQGRASSSESTK*TLPRCSSPARTLKM
Trigger: CATCTTTAAGGTCCTAGCTGGACTGCTGCACCTTGGCAATGTCCATTTTGTTGACTCAGAGGATGAAGCCCTGCCCTGCCAAGTGATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS CCA 90 bp AGCAAGGCTGAGGTCCTCACAGAGACCTTGGTATCATCCATCACTTaGCAGGGCAGGGCTTCATCCTCTGAGTCAACAAAATGGACATTG +
Preference number: 5 (lower is better)
Translates to: SKAEVLTETLVSSIT*QGRASSSESTKWTL
Trigger: CAATGTCCATTTTGTTGACTCAGAGGATGAAGCCCTGCCCTGCCAAGTGATGGATGATACCAAGGTCTCTGTGAGGACCTCAGCCTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR CAA 90 bp ACAACATTCTGGATGGAGCTTGAGCACAAAGATACTAAGCTGGGATGTTGTGGCGTCACGGGATTCACCTaGGTGAGGTCATCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: TTFWMELEHKDTKLGCCGVTGFT*VRSSSW
Trigger: CCAGCTGGATGACCTCACCAAGGTGAATCCCGTGAC...GCCACAACATCCCAGCTTAGTATCTTTGTGCTCAAGCTCCATCCAGAATGTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS GCA 90 bp AAGTGGAGACTTCCTGCAGTGAAACTTTATCGAGCCCTGGGGCAGTaGTCTGATAGATGTAATACCAGCCTGATCCTGTTGTGGTGTCTG +
Preference number: 5 (lower is better)
Translates to: KWRLPAVKLYRALGQ*SDRCNTSLILLWCL
Trigger: CAGACACCACAACAGGATCAGGCTGGTATTACATCTATCAGAGCACTGCCCCAGGGCTCGATAAAGTTTCACTGCAGGAAGTCTCCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS CCA 90 bp CAATTTCTGAGGCTGAGGTGCAGCATGGTACTCTTGCATCAGTTCTaGTGCATAGAGTTGAGGGACGTGCTTAAAGGGGTTCAGAGCTAC +
Preference number: 5 (lower is better)
Translates to: QFLRLRCSMVLLHQF*CIELRDVLKGVQSY
Trigger: GTAGCTCTGAACCCCTTTAAGCACGTCCCTCAACTCTATGCACCAGAACTGATGCAAGAGTACCATGCTGCACCTCAGCCTCAGAAATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020837.7
ENSMUST00000093969.11
CDS-3UTR CAA 90 bp CAAAGGCACTTTCTATGCAGCTGTTTTAGATGTGCCAGATGGTACCAGCTCTATGTCACGGGATTCACCTaGGTGAGGTCATCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: QRHFLCSCFRCARWYQLYVTGFT*VRSSSW
Trigger: CCAGCTGGATGACCTCACCAAGGTGAATCCCGTGAC...ATAGAGCTGGTACCATCTGGCACATCTAAAACAGCTGCATAGAAAGTGCCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020837.7
CDS-3UTR CAA 90 bp CAAAGGCACTTTCTATGCAGCTGTTTTAGATGTGCCAGATGGTACCAGCTCTATACCACGATGGACTGGTaGACCGGCTCAATCAGGCTC +
Preference number: 5 (lower is better)
Translates to: QRHFLCSCFRCARWYQLYTTMDW*TGSIRL
Trigger: GAGCCTGATTGAGCCGGTCAACCAGTCCATCGTGGT...ATAGAGCTGGTACCATCTGGCACATCTAAAACAGCTGCATAGAAAGTGCCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020837.7
CDS-3UTR CAA 90 bp GGATGGAGCTTGAGCACAAAGATACTAAGCTGGGATGTTGTGGCCCTAATCCTGAAGGCAGTCCATGATTaGGAGTCTGCACAGATGCTG +
Preference number: 5 (lower is better)
Translates to: GWSLSTKILSWDVVALILKAVHD*ESAQML
Trigger: CAGCATCTGTGCAGACTCCAAATCATGGACTGCCTT...CAGGATTAGGGCCACAACATCCCAGCTTAGTATCTTTGTGCTCAAGCTCCATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS GCA 90 bp TCCAGTTCTTTAGAGGCAAGACAGGCCATTCTGATTCTCCACTTATaGCATGCGTGCTTGATGACCGTGGCAGCTATGTGTAACCTTCTG +
Preference number: 5 (lower is better)
Translates to: SSSLEARQAILILHL*HACLMTVAAMCNLL
Trigger: CAGAAGGTTACACATAGCTGCCACGGTCATCAAGCACGCATGGCATAAGTGGAGAATCAGAATGGCCTGTCTTGCCTCTAAAGAACTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS-3UTR CAA 90 bp ATCCATCTTGCTGTAGTGACAACATTCTGGATGGAGCTTGAGCACAAAGATACTGGTATCATCCATCACTaGGCAGGGCAGGGCTTCATC +
Preference number: 5 (lower is better)
Translates to: IHLAVVTTFWMELEHKDTGIIHH*AGQGFI
Trigger: GATGAAGCCCTGCCCTGCCAAGTGATGGATGATACC...AGTATCTTTGTGCTCAAGCTCCATCCAGAATGTTGTCACTACAGCAAGATGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS GCA 72 bp GGCCCAGGCAGGGCCGTCCTGCCAGCGTGCTCTCGATaGGCGTCTGTAGTTGTGCTGCACTGCTTGGCCGGT +
Preference number: 6 (lower is better)
Translates to: GPGRAVLPACSR*ASVVVLHCLAG
Trigger: ACCGGCCAAGCAGTGCAGCACAACTACAGACGCGCATCGAGAGCACGCTGGCAGGACGGCCCTGCCTGGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS TCA 72 bp CCGCGAAATGCACAACCACGAAGCTGGGCTCCCGGCTaGGCTTGTTATGGCCCAGGCAGGGCCGTCCTGCCA +
Preference number: 6 (lower is better)
Translates to: PRNAQPRSWAPG*ACYGPGRAVLP
Trigger: TGGCAGGACGGCCCTGCCTGGGCCATAACAAGCTCAGCCGGGAGCCCAGCTTCGTGGTTGTGCATTTCGCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS GCA 72 bp GCCTGGATGAGCACGGCAGCCCGCCTCTGTTTCTCCTaGTTTTGGAGCCGGTGTCGCCTCCAGCCACACTGG +
Preference number: 6 (lower is better)
Translates to: AWMSTAARLCFS*FWSRCRLQPHW
Trigger: CCAGTGTGGCTGGAGGCGACACCGGCTCCAAAAGCAGGAGAAACAGAGGCGGGCTGCCGTGCTCATCCAGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS GCA 72 bp AGGCCGGCTGTGTGGTACCGTACAGGTCCCGCGAAATaGACAACCACGAAGCTGGGCTCCCGGCTGAGCTTG +
Preference number: 6 (lower is better)
Translates to: RPAVWYRTGPAK*TTTKLGSRLSL
Trigger: CAAGCTCAGCCGGGAGCCCAGCTTCGTGGTTGTGCATTTCGCGGGACCTGTACGGTACCACACAGCCGGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS CAA 90 bp AGCAGCCTGGATGAGCACGGCAGCCCGCCTCTGTTTCTCCTGCTTTaGGAGCCGGTGTCGCCTCCAGCCACACTGGATGCAACGGGCACA +
Preference number: 6 (lower is better)
Translates to: SSLDEHGSPPLFLLL*EPVSPPATLDATGT
Trigger: TGTGCCCGTTGCATCCAGTGTGGCTGGAGGCGACACCGGCTCCAAAAGCAGGAGAAACAGAGGCGGGCTGCCGTGCTCATCCAGGCTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS GCA 72 bp TGTCGCCTCCAGCCACACTGGATGCAACGGGCACACTaGTCCAGCATCTGGGCACGCCCACATTCCAGAAGC +
Preference number: 6 (lower is better)
Translates to: CRLQPHWMQRAH*SSIWARPHSRS
Trigger: GCTTCTGGAATGTGGGCGTGCCCAGATGCTGGAGCAGTGTGCCCGTTGCATCCAGTGTGGCTGGAGGCGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS CCA 72 bp TCCTGCTTTTGGAGCCGGTGTCGCCTCCAGCCACACTaGATGCAACGGGCACACTGCTCCAGCATCTGGGCA +
Preference number: 6 (lower is better)
Translates to: SCFWSRCRLQPH*MQRAHCSSIWA
Trigger: TGCCCAGATGCTGGAGCAGTGTGCCCGTTGCATCCAGTGTGGCTGGAGGCGACACCGGCTCCAAAAGCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS CAA 72 bp GATGAGCACGGCAGCCCGCCTCTGTTTCTCCTGCTTTaGGAGCCGGTGTCGCCTCCAGCCACACTGGATGCA +
Preference number: 6 (lower is better)
Translates to: DEHGSPPLFLLL*EPVSPPATLDA
Trigger: TGCATCCAGTGTGGCTGGAGGCGACACCGGCTCCAAAAGCAGGAGAAACAGAGGCGGGCTGCCGTGCTCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS CAA 90 bp GCCTGCAGGCACCTCAGGACTGTTTCCAGTGTCACGGGATTCACCTaGGTGAGGTCATCCAGCTGGTGCAGTGGGATCTCCCCACCCAGG +
Preference number: 6 (lower is better)
Translates to: ACRHLRTVSSVTGFT*VRSSSWCSGISPPR
Trigger: CCTGGGTGGGGAGATCCCACTGCACCAGCTGGATGACCTCACCAAGGTGAATCCCGTGACACTGGAAACAGTCCTGAGGTGCCTGCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020837.7
ENSMUST00000093969.11
CDS GCA 72 bp GGAAACAGCATCGTGAGCAGGGGGTCTTGGGATTGCTaGAGGAGCTCAGTCAGCTCAGGGGGAACAGGGTCC +
Preference number: 6 (lower is better)
Translates to: GNSIVSRGSWDC*RSSVSSGGTGS
Trigger: GGACCCTGTTCCCCCTGAGCTGACTGAGCTCCTGCAGCAATCCCAAGACCCCCTGCTCACGATGCTGTTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS GCA 72 bp GCAGGAAACAGCATCGTGAGCAGGGGGTCTTGGGATTaGTGCAGGAGCTCAGTCAGCTCAGGGGGAACAGGG +
Preference number: 6 (lower is better)
Translates to: AGNSIVSRGSWD*CRSSVSSGGTG
Trigger: CCCTGTTCCCCCTGAGCTGACTGAGCTCCTGCAGCAATCCCAAGACCCCCTGCTCACGATGCTGTTTCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS CCA 72 bp ATGAGCACGGCAGCCCGCCTCTGTTTCTCCTGCTTTTaGAGCCGGTGTCGCCTCCAGCCACACTGGATGCAA +
Preference number: 6 (lower is better)
Translates to: MSTAARLCFSCF*SRCRLQPHWMQ
Trigger: TTGCATCCAGTGTGGCTGGAGGCGACACCGGCTCCAAAAGCAGGAGAAACAGAGGCGGGCTGCCGTGCTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS CAA 72 bp AGGGTTGGCAGGAAACAGCATCGTGAGCAGGGGGTCTaGGGATTGCTGCAGGAGCTCAGTCAGCTCAGGGGG +
Preference number: 6 (lower is better)
Translates to: RVGRKQHREQGV*GLLQELSQLRG
Trigger: CCCCCTGAGCTGACTGAGCTCCTGCAGCAATCCCAAGACCCCCTGCTCACGATGCTGTTTCCTGCCAACCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS CAA 90 bp TGGTGCAGTGGGATCTCCCCACCCAGGAACTCCCTTAGGTCTCCCTaGAGGGAGGCCCTACCTTCGGCATCAGAGCCTAAACTGTGGCCA +
Preference number: 6 (lower is better)
Translates to: WCSGISPPRNSLRSP*REALPSASEPKLWP
Trigger: TGGCCACAGTTTAGGCTCTGATGCCGAAGGTAGGGCCTCCCTCAAGGGAGACCTAAGGGAGTTCCTGGGTGGGGAGATCCCACTGCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020837.7
ENSMUST00000093969.11
CDS TCA 72 bp GCTGGGGACATCGAGGACCGCAGGGTACCAGGAGCCTaGGGCATGGGTTTCTCCTCCATACCATCCAGTTCT +
Preference number: 6 (lower is better)
Translates to: AGDIEDRRVPGA*GMGFSSIPSSS
Trigger: AGAACTGGATGGTATGGAGGAGAAACCCATGCCTCAGGCTCCTGGTACCCTGCGGTCCTCGATGTCCCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS GCA 72 bp TCACACTCGGCTCGGGAGCAGGGCTTCTGGAACACCTaGTGCTGCTTGCCTGCCTTGATGGTTCGAATCTGC +
Preference number: 6 (lower is better)
Translates to: SHSAREQGFWNT*CCLPALMVRIC
Trigger: GCAGATTCGAACCATCAAGGCAGGCAAGCAGCAGCAGGTGTTCCAGAAGCCCTGCTCCCGAGCCGAGTGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS CCA 72 bp CCACACTGGATGCAACGGGCACACTGCTCCAGCATCTaGGCACGCCCACATTCCAGAAGCTCTAGCATGGAG +
Preference number: 6 (lower is better)
Translates to: PHWMQRAHCSSI*ARPHSRSSSME
Trigger: CTCCATGCTAGAGCTTCTGGAATGTGGGCGTGCCCAGATGCTGGAGCAGTGTGCCCGTTGCATCCAGTGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS CAA 72 bp GGGATCTCCCCACCCAGGAACTCCCTTAGGTCTCCCTaGAGGGAGGCCCTACCTTCGGCATCAGAGCCTAAA +
Preference number: 6 (lower is better)
Translates to: GISPPRNSLRSP*REALPSASEPK
Trigger: TTTAGGCTCTGATGCCGAAGGTAGGGCCTCCCTCAAGGGAGACCTAAGGGAGTTCCTGGGTGGGGAGATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020837.7
ENSMUST00000093969.11
CDS CAA 72 bp AGGACCTGCAGGAGCTGTTCCAGTGAGGCCTTGAACTaGGACACCACAGTCAATGCAGGAGCCCGGCTCTGG +
Preference number: 6 (lower is better)
Translates to: RTCRSCSSEALN*DTTVNAGARLW
Trigger: CCAGAGCCGGGCTCCTGCATTGACTGTGGTGTCCAAGTTCAAGGCCTCACTGGAACAGCTCCTGCAGGTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS CAA 90 bp CTTCTCTTCAGGGTTGGCAGGAAACAGCATCGTGAGCAGGGGGTCTaGGGATTGCTGCAGGAGCTCAGTCAGCTCAGGGGGAACAGGGTC +
Preference number: 6 (lower is better)
Translates to: LLFRVGRKQHREQGV*GLLQELSQLRGNRV
Trigger: GACCCTGTTCCCCCTGAGCTGACTGAGCTCCTGCAGCAATCCCAAGACCCCCTGCTCACGATGCTGTTTCCTGCCAACCCTGAAGAGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS CAA 90 bp AGAGCATGGAGAATGTCCTGTAGTAGAGGTTGCAGTGTGGCCTCCTaGGCACACAGAGGCTGCTCAGAGGACCCTTCGGCAGGCTCCAGG +
Preference number: 6 (lower is better)
Translates to: RAWRMSCSRGCSVAS*AHRGCSEDPSAGSR
Trigger: CCTGGAGCCTGCCGAAGGGTCCTCTGAGCAGCCTCTGTGTGCCAAGGAGGCCACACTGCAACCTCTACTACAGGACATTCTCCATGCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS CAA 90 bp TTCAGGGTTGGCAGGAAACAGCATCGTGAGCAGGGGGTCTTGGGATaGCTGCAGGAGCTCAGTCAGCTCAGGGGGAACAGGGTCCTTGTT +
Preference number: 6 (lower is better)
Translates to: FRVGRKQHREQGVLG*LQELSQLRGNRVLV
Trigger: AACAAGGACCCTGTTCCCCCTGAGCTGACTGAGCTCCTGCAGCAATCCCAAGACCCCCTGCTCACGATGCTGTTTCCTGCCAACCCTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS TCA 72 bp GGGTCTTCTCTTCAGGGTTGGCAGGAAACAGCATCGTaGGCAGGGGGTCTTGGGATTGCTGCAGGAGCTCAG +
Preference number: 6 (lower is better)
Translates to: GSSLQGWQETAS*AGGLGIAAGAQ
Trigger: CTGAGCTCCTGCAGCAATCCCAAGACCCCCTGCTCACGATGCTGTTTCCTGCCAACCCTGAAGAGAAGACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS GCA 72 bp GGGGCGGGTCGCAGAGGAAATGGCACCAGAGGGCAGTaGAAGGACACTGAGCTTACCAAAAGCTTCCATCAC +
Preference number: 6 (lower is better)
Translates to: GAGRRGNGTRGQ*KDTELTKSFHH
Trigger: GTGATGGAAGCTTTTGGTAAGCTCAGTGTCCTTGCACTGCCCTCTGGTGCCATTTCCTCTGCGACCCGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020837.7
CDS GCA 72 bp TCGGCTCGGGAGCAGGGCTTCTGGAACACCTGCTGCTaGTTGCCTGCCTTGATGGTTCGAATCTGCATACTC +
Preference number: 6 (lower is better)
Translates to: SAREQGFWNTCC*LPALMVRICIL
Trigger: GAGTATGCAGATTCGAACCATCAAGGCAGGCAAGCAGCAGCAGGTGTTCCAGAAGCCCTGCTCCCGAGCCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS GCA 72 bp CTTCGGCAGGCTCCAGGCCCCCGAGGCCAGAGGACATaGGAGGTCCGAGCCTTCTCAGTAGTTTATATCTTT +
Preference number: 6 (lower is better)
Translates to: LRQAPGPRGQRT*EVRAFSVVYIF
Trigger: AAAGATATAAACTACTGAGAAGGCTCGGACCTCGCATGTCCTCTGGCCTCGGGGGCCTGGAGCCTGCCGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS CCA 72 bp AGTGTCACGGGATTCACCTTGGTGAGGTCATCCAGCTaGTGCAGTGGGATCTCCCCACCCAGGAACTCCCTT +
Preference number: 6 (lower is better)
Translates to: SVTGFTLVRSSS*CSGISPPRNSL
Trigger: AAGGGAGTTCCTGGGTGGGGAGATCCCACTGCACCAGCTGGATGACCTCACCAAGGTGAATCCCGTGACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020837.7
ENSMUST00000093969.11
CDS CCA 72 bp ACAGGGTCCTTGTTCTTTTCCACCAGGCCGGCTGTGTaGTACCGTACAGGTCCCGCGAAATGCACAACCACG +
Preference number: 6 (lower is better)
Translates to: TGSLFFSTRPAV*YRTGPAKCTTT
Trigger: CGTGGTTGTGCATTTCGCGGGACCTGTACGGTACCACACAGCCGGCCTGGTGGAAAAGAACAAGGACCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS CCA 72 bp GAATGTCCTGTAGTAGAGGTTGCAGTGTGGCCTCCTTaGCACACAGAGGCTGCTCAGAGGACCCTTCGGCAG +
Preference number: 6 (lower is better)
Translates to: ECPVVEVAVWPP*HTEAAQRTLRQ
Trigger: CTGCCGAAGGGTCCTCTGAGCAGCCTCTGTGTGCCAAGGAGGCCACACTGCAACCTCTACTACAGGACATTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS CCA 72 bp GCTGAGTTGGCTAGCACCAGTCCCAGGGGCCAGAGATaGATTATTGCTCCCAGGAACCTAGTGTGTGCTGGG +
Preference number: 6 (lower is better)
Translates to: AELASTSPRGQR*IIAPRNLVCAG
Trigger: CCCAGCACACACTAGGTTCCTGGGAGCAATAATCCATCTCTGGCCCCTGGGACTGGTGCTAGCCAACTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS CCA 72 bp CAGCCTGATCCTGTTGTGGTGTCTGGACTTTGTTGCTaGGTCTGTCTGAGGGAAGCCGAAGGCAGGCATGGG +
Preference number: 6 (lower is better)
Translates to: QPDPVVVSGLCC*VCLREAEGRHG
Trigger: CCCATGCCTGCCTTCGGCTTCCCTCAGACAGACCCAGCAACAAAGTCCAGACACCACAACAGGATCAGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS TCA 72 bp TCAGGACTGTTTCCAGTGTCACGGGATTCACCTTGGTaGGGTCATCCAGCTGGTGCAGTGGGATCTCCCCAC +
Preference number: 6 (lower is better)
Translates to: SGLFPVSRDSPW*GHPAGAVGSPH
Trigger: GTGGGGAGATCCCACTGCACCAGCTGGATGACCTCACCAAGGTGAATCCCGTGACACTGGAAACAGTCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020837.7
ENSMUST00000093969.11
CDS GCA 72 bp GCTGGCAGAGCATGGAGAATGTCCTGTAGTAGAGGTTaGAGTGTGGCCTCCTTGGCACACAGAGGCTGCTCA +
Preference number: 6 (lower is better)
Translates to: AGRAWRMSCSRG*SVASLAHRGCS
Trigger: TGAGCAGCCTCTGTGTGCCAAGGAGGCCACACTGCAACCTCTACTACAGGACATTCTCCATGCTCTGCCAGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS CCA 72 bp ACACCAGCCAGTCGAACAGCCGTGCATAGATCAGTTTaGCCAGACAGTCTCTGCGTGTGTCACACTCGGCTC +
Preference number: 6 (lower is better)
Translates to: TPASRTAVHRSV*PDSLCVCHTRL
Trigger: GAGCCGAGTGTGACACACGCAGAGACTGTCTGGCCAAACTGATCTATGCACGGCTGTTCGACTGGCTGGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS CAA 72 bp AGCTGCAGCAGCAAGGCTGAGGTCCTCACAGAGACCTaGGTATCATCCATCACTTGGCAGGGCAGGGCTTCA +
Preference number: 6 (lower is better)
Translates to: SCSSKAEVLTET*VSSITWQGRAS
Trigger: TGAAGCCCTGCCCTGCCAAGTGATGGATGATACCAAGGTCTCTGTGAGGACCTCAGCCTTGCTGCTGCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS TCA 72 bp TCTGGTGAGAGACCCGGATGGGAAAGCCAGCAGCACTaGTGTGAATGGTTTCCACAAGGCCACAGGCCTCTA +
Preference number: 6 (lower is better)
Translates to: SGERPGWESQQH*CEWFPQGHRPL
Trigger: TAGAGGCCTGTGGCCTTGTGGAAACCATTCACATCAGTGCTGCTGGCTTTCCCATCCGGGTCTCTCACCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS TCA 72 bp CTGTTGTGGTGTCTGGACTTTGTTGCTGGGTCTGTCTaGGGGAAGCCGAAGGCAGGCATGGGCTACCAGTTT +
Preference number: 6 (lower is better)
Translates to: LLWCLDFVAGSV*GKPKAGMGYQF
Trigger: AAACTGGTAGCCCATGCCTGCCTTCGGCTTCCCTCAGACAGACCCAGCAACAAAGTCCAGACACCACAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS CCA 72 bp TGTTCTGGGTGGGGGTGTCGATGCCCAAATGGAGCATaGCCTCTCTGGTCACCTCGAAACAATCCTCTTCCA +
Preference number: 6 (lower is better)
Translates to: CSGWGCRCPNGA*PLWSPRNNPLP
Trigger: TGGAAGAGGATTGTTTCGAGGTGACCAGAGAGGCCATGCTCCATTTGGGCATCGACACCCCCACCCAGAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS CCA 72 bp TGCAGCAGTCCAGCTAGGACCTTAAAGATGTTGTTCTaGGTGGGGGTGTCGATGCCCAAATGGAGCATGGCC +
Preference number: 6 (lower is better)
Translates to: CSSPARTLKMLF*VGVSMPKWSMA
Trigger: GGCCATGCTCCATTTGGGCATCGACACCCCCACCCAGAACAACATCTTTAAGGTCCTAGCTGGACTGCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS CCA 72 bp TGGCAGGGCAGGGCTTCATCCTCTGAGTCAACAAAATaGACATTGCCAAGGTGCAGCAGTCCAGCTAGGACC +
Preference number: 6 (lower is better)
Translates to: WQGRASSSESTK*TLPRCSSPART
Trigger: GGTCCTAGCTGGACTGCTGCACCTTGGCAATGTCCATTTTGTTGACTCAGAGGATGAAGCCCTGCCCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS CCA 72 bp ATGTGTTTCCGAGTTAACCAGGACCTAAAAGCAGCCTaGATGAGCACGGCAGCCCGCCTCTGTTTCTCCTGC +
Preference number: 6 (lower is better)
Translates to: MCFRVNQDLKAA*MSTAARLCFSC
Trigger: GCAGGAGAAACAGAGGCGGGCTGCCGTGCTCATCCAGGCTGCTTTTAGGTCCTGGTTAACTCGGAAACACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS TCA 72 bp CAGCAGCATTTTCTCTGGGAGCTGCAGCAGCAAGGCTaGGGTCCTCACAGAGACCTTGGTATCATCCATCAC +
Preference number: 6 (lower is better)
Translates to: QQHFLWELQQQG*GPHRDLGIIHH
Trigger: GTGATGGATGATACCAAGGTCTCTGTGAGGACCTCAGCCTTGCTGCTGCAGCTCCCAGAGAAAATGCTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS CAA 72 bp GCAGTCCATGATTTGGAGTCTGCACAGATGCTGCTGTaGATCACAGACACCAGCCAGTCGAACAGCCGTGCA +
Preference number: 6 (lower is better)
Translates to: AVHDLESAQMLL*ITDTSQSNSRA
Trigger: TGCACGGCTGTTCGACTGGCTGGTGTCTGTGATCAACAGCAGCATCTGTGCAGACTCCAAATCATGGACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS TCA 72 bp CCTCTCTGCAATCTTATGGTTCTCACAGGAAGTCGGTaGGGCAGCCACCACCGCATAGAACTTCATCAGGCA +
Preference number: 6 (lower is better)
Translates to: PLCNLMVLTGSR*GSHHRIELHQA
Trigger: TGCCTGATGAAGTTCTATGCGGTGGTGGCTGCCTCACCGACTTCCTGTGAGAACCATAAGATTGCAGAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020837.7
ENSMUST00000093969.11
CDS TCA 72 bp CAGTCCATGATTTGGAGTCTGCACAGATGCTGCTGTTaGTCACAGACACCAGCCAGTCGAACAGCCGTGCAT +
Preference number: 6 (lower is better)
Translates to: QSMIWSLHRCCC*SQTPASRTAVH
Trigger: ATGCACGGCTGTTCGACTGGCTGGTGTCTGTGATCAACAGCAGCATCTGTGCAGACTCCAAATCATGGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS TCA 72 bp GTGTTCTTAGCCGGGTCACTGGGAGTGGCTGCTGTCTaGATTAAAGCTGGCAGAGCATGGAGAATGTCCTGT +
Preference number: 6 (lower is better)
Translates to: VFLAGSLGVAAV*IKAGRAWRMSC
Trigger: ACAGGACATTCTCCATGCTCTGCCAGCTTTAATTCAGACAGCAGCCACTCCCAGTGACCCGGCTAAGAACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS TCA 72 bp CCCTGGGGCAGTGCTCTGATAGATGTAATACCAGCCTaGTCCTGTTGTGGTGTCTGGACTTTGTTGCTGGGT +
Preference number: 6 (lower is better)
Translates to: PWGSALIDVIPA*SCCGVWTLLLG
Trigger: ACCCAGCAACAAAGTCCAGACACCACAACAGGATCAGGCTGGTATTACATCTATCAGAGCACTGCCCCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS CCA 72 bp TGGGGGTGTCGATGCCCAAATGGAGCATGGCCTCTCTaGTCACCTCGAAACAATCCTCTTCCAAACTGCTTT +
Preference number: 6 (lower is better)
Translates to: WGCRCPNGAWPL*SPRNNPLPNCF
Trigger: AAAGCAGTTTGGAAGAGGATTGTTTCGAGGTGACCAGAGAGGCCATGCTCCATTTGGGCATCGACACCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS CAA 72 bp CATGAAGATCTTTGTCCTGCCACAGTACAGTGGGATTaGTGTGTTCTTAGCCGGGTCACTGGGAGTGGCTGC +
Preference number: 6 (lower is better)
Translates to: HEDLCPATVQWD*CVLSRVTGSGC
Trigger: GCAGCCACTCCCAGTGACCCGGCTAAGAACACACAAATCCCACTGTACTGTGGCAGGACAAAGATCTTCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS CAA 90 bp CTGAGGTGCAGCATGGTACTCTTGCATCAGTTCTGGTGCATAGAGTaGAGGGACGTGCTTAAAGGGGTTCAGAGCTACCAAGGTACAGCC +
Preference number: 6 (lower is better)
Translates to: LRCSMVLLHQFWCIE*RDVLKGVQSYQGTA
Trigger: GGCTGTACCTTGGTAGCTCTGAACCCCTTTAAGCACGTCCCTCAACTCTATGCACCAGAACTGATGCAAGAGTACCATGCTGCACCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020837.7
ENSMUST00000093969.11
CDS CAA 90 bp GGAGTCAGTCATGAAGATCTTTGTCCTGCCACAGTACAGTGGGATTaGTGTGTTCTTAGCCGGGTCACTGGGAGTGGCTGCTGTCTGAAT +
Preference number: 6 (lower is better)
Translates to: GVSHEDLCPATVQWD*CVLSRVTGSGCCLN
Trigger: ATTCAGACAGCAGCCACTCCCAGTGACCCGGCTAAGAACACACAAATCCCACTGTACTGTGGCAGGACAAAGATCTTCATGACTGACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS TCA 72 bp ATCATCCATCACTTGGCAGGGCAGGGCTTCATCCTCTaGGTCAACAAAATGGACATTGCCAAGGTGCAGCAG +
Preference number: 6 (lower is better)
Translates to: IIHHLAGQGFIL*VNKMDIAKVQQ
Trigger: CTGCTGCACCTTGGCAATGTCCATTTTGTTGACTCAGAGGATGAAGCCCTGCCCTGCCAAGTGATGGATGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS CCA 72 bp AGGCTGAGGTGCAGCATGGTACTCTTGCATCAGTTCTaGTGCATAGAGTTGAGGGACGTGCTTAAAGGGGTT +
Preference number: 6 (lower is better)
Translates to: RLRCSMVLLHQF*CIELRDVLKGV
Trigger: AACCCCTTTAAGCACGTCCCTCAACTCTATGCACCAGAACTGATGCAAGAGTACCATGCTGCACCTCAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020837.7
ENSMUST00000093969.11
CDS CCA 72 bp TTCAGAATCCGCTGTTCAATCCTCTCTGCAATCTTATaGTTCTCACAGGAAGTCGGTGAGGCAGCCACCACC +
Preference number: 6 (lower is better)
Translates to: FRIRCSILSAIL*FSQEVGEAATT
Trigger: GGTGGTGGCTGCCTCACCGACTTCCTGTGAGAACCATAAGATTGCAGAGAGGATTGAACAGCGGATTCTGAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020837.7
ENSMUST00000093969.11
CDS CAA 72 bp GGCAGGGCTTCATCCTCTGAGTCAACAAAATGGACATaGCCAAGGTGCAGCAGTCCAGCTAGGACCTTAAAG +
Preference number: 6 (lower is better)
Translates to: GRASSSESTKWT*PRCSSPARTLK
Trigger: CTTTAAGGTCCTAGCTGGACTGCTGCACCTTGGCAATGTCCATTTTGTTGACTCAGAGGATGAAGCCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS CAA 90 bp ACTTGGCAGGGCAGGGCTTCATCCTCTGAGTCAACAAAATGGACATaGCCAAGGTGCAGCAGTCCAGCTAGGACCTTAAAGATGTTGTTC +
Preference number: 6 (lower is better)
Translates to: TWQGRASSSESTKWT*PRCSSPARTLKMLF
Trigger: GAACAACATCTTTAAGGTCCTAGCTGGACTGCTGCACCTTGGCAATGTCCATTTTGTTGACTCAGAGGATGAAGCCCTGCCCTGCCAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS CAA 90 bp GAGGCAAGACAGGCCATTCTGATTCTCCACTTATGCCATGCGTGCTaGATGACCGTGGCAGCTATGTGTAACCTTCTGATGTGTTTCCGA +
Preference number: 6 (lower is better)
Translates to: EARQAILILHLCHAC*MTVAAMCNLLMCFR
Trigger: TCGGAAACACATCAGAAGGTTACACATAGCTGCCACGGTCATCAAGCACGCATGGCATAAGTGGAGAATCAGAATGGCCTGTCTTGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS GCA 72 bp CTTCCTGCAGTGAAACTTTATCGAGCCCTGGGGCAGTaGTCTGATAGATGTAATACCAGCCTGATCCTGTTG +
Preference number: 6 (lower is better)
Translates to: LPAVKLYRALGQ*SDRCNTSLILL
Trigger: CAACAGGATCAGGCTGGTATTACATCTATCAGAGCACTGCCCCAGGGCTCGATAAAGTTTCACTGCAGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS CCA 72 bp CCTCAGGGAGGTGCCATTGGAGCCTTTCATCCTTGGTaGCTCCTTTGCAAATCTGGTAGAAGATGTGAAAGT +
Preference number: 6 (lower is better)
Translates to: PQGGAIGAFHPW*LLCKSGRRCES
Trigger: ACTTTCACATCTTCTACCAGATTTGCAAAGGAGCCACCAAGGATGAAAGGCTCCAATGGCACCTCCCTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS CCA 72 bp TTCCCTCAGGGAGGTGCCATTGGAGCCTTTCATCCTTaGTGGCTCCTTTGCAAATCTGGTAGAAGATGTGAA +
Preference number: 6 (lower is better)
Translates to: FPQGGAIGAFHP*WLLCKSGRRCE
Trigger: TTCACATCTTCTACCAGATTTGCAAAGGAGCCACCAAGGATGAAAGGCTCCAATGGCACCTCCCTGAGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS CCA 72 bp GTCAGTCATGAAGATCTTTGTCCTGCCACAGTACAGTaGGATTTGTGTGTTCTTAGCCGGGTCACTGGGAGT +
Preference number: 6 (lower is better)
Translates to: VSHEDLCPATVQ*DLCVLSRVTGS
Trigger: ACTCCCAGTGACCCGGCTAAGAACACACAAATCCCACTGTACTGTGGCAGGACAAAGATCTTCATGACTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS CAA 90 bp GGCAGTGCAAGGACACTGAGCTTACCAAAAGCTTCCATCACAGGGTaGGAGTTCAGAATCCGCTGTTCAATCCTCTCTGCAATCTTATGG +
Preference number: 6 (lower is better)
Translates to: GSARTLSLPKASITG*EFRIRCSILSAILW
Trigger: CCATAAGATTGCAGAGAGGATTGAACAGCGGATTCTGAACTCCAACCCTGTGATGGAAGCTTTTGGTAAGCTCAGTGTCCTTGCACTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020837.7
CDS CAA 90 bp CTGTTCCTCAGTGTGCATGCGTTCCCAAAAGCTTCCATCACAGGGTaGGAGTTCAGAATCCGCTGTTCAATCCTCTCTGCAATCTTATGG +
Preference number: 6 (lower is better)
Translates to: LFLSVHAFPKASITG*EFRIRCSILSAILW
Trigger: CCATAAGATTGCAGAGAGGATTGAACAGCGGATTCTGAACTCCAACCCTGTGATGGAAGCTTTTGGGAACGCATGCACACTGAGGAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS CAA 72 bp AGCATGGTACTCTTGCATCAGTTCTGGTGCATAGAGTaGAGGGACGTGCTTAAAGGGGTTCAGAGCTACCAA +
Preference number: 6 (lower is better)
Translates to: SMVLLHQFWCIE*RDVLKGVQSYQ
Trigger: TTGGTAGCTCTGAACCCCTTTAAGCACGTCCCTCAACTCTATGCACCAGAACTGATGCAAGAGTACCATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020837.7
ENSMUST00000093969.11
CDS CAA 72 bp TTTCAATTTCTGAGGCTGAGGTGCAGCATGGTACTCTaGCATCAGTTCTGGTGCATAGAGTTGAGGGACGTG +
Preference number: 6 (lower is better)
Translates to: FQFLRLRCSMVL*HQFWCIELRDV
Trigger: CACGTCCCTCAACTCTATGCACCAGAACTGATGCAAGAGTACCATGCTGCACCTCAGCCTCAGAAATTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020837.7
ENSMUST00000093969.11
CDS CAA 72 bp AGGACACTGAGCTTACCAAAAGCTTCCATCACAGGGTaGGAGTTCAGAATCCGCTGTTCAATCCTCTCTGCA +
Preference number: 6 (lower is better)
Translates to: RTLSLPKASITG*EFRIRCSILSA
Trigger: TGCAGAGAGGATTGAACAGCGGATTCTGAACTCCAACCCTGTGATGGAAGCTTTTGGTAAGCTCAGTGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020837.7
CDS CAA 90 bp GGACTGGTTGACCGGCTCAATCAGGCTCTTGACATTTCTATAGGTTaGTTCACCCACTGTGAAGATGTGGGGTTTCAATTTCTGAGGCTG +
Preference number: 6 (lower is better)
Translates to: GLVDRLNQALDISIG*FTHCEDVGFQFLRL
Trigger: CAGCCTCAGAAATTGAAACCCCACATCTTCACAGTGGGTGAACAAACCTATAGAAATGTCAAGAGCCTGATTGAGCCGGTCAACCAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020837.7
ENSMUST00000093969.11
CDS TCA 72 bp GAAATGACTCAAACCCATACACATCTAGCAGCCCTATaGAGGCAGTCCATGATTTGGAGTCTGCACAGATGC +
Preference number: 6 (lower is better)
Translates to: EMTQTHTHLAAL*RQSMIWSLHRC
Trigger: GCATCTGTGCAGACTCCAAATCATGGACTGCCTTCATAGGGCTGCTAGATGTGTATGGGTTTGAGTCATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS GCA 72 bp TCATCCTCTGAGTCAACAAAATGGACATTGCCAAGGTaGAGCAGTCCAGCTAGGACCTTAAAGATGTTGTTC +
Preference number: 6 (lower is better)
Translates to: SSSESTKWTLPR*SSPARTLKMLF
Trigger: GAACAACATCTTTAAGGTCCTAGCTGGACTGCTGCACCTTGGCAATGTCCATTTTGTTGACTCAGAGGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093969.11
CDS CAA 72 bp GACCGGCTCAATCAGGCTCTTGACATTTCTATAGGTTaGTTCACCCACTGTGAAGATGTGGGGTTTCAATTT +
Preference number: 6 (lower is better)
Translates to: DRLNQALDISIG*FTHCEDVGFQF
Trigger: AAATTGAAACCCCACATCTTCACAGTGGGTGAACAAACCTATAGAAATGTCAAGAGCCTGATTGAGCCGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020837.7
ENSMUST00000093969.11