RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MYO18B (Mus musculus)

Ensembl gene IDs: ENSMUSG00000072720

Ensembl transcript IDs: ENSMUST00000086617.11, ENSMUST00000183273.2

Found 648 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTGGCAAAGGCCCTCCGAACCACACGACTCCGGTGCAGAGCCTGCTaGGAGGTACCCTCAAGCCCGGCCACTGCTCGGCACACAGGAGGC +
Preference number: 1 (lower is better)
Translates to: LAKALRTTRLRCRAC*EVPSSPATARHTGG
Trigger: GCCTCCTGTGTGCCGAGCAGTGGCCGGGCTTGAGGGTACCTCCCAGCAGGCTCTGCACCGGAGTCGTGTGGTTCGGAGGGCCTTTGCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR GCA 90 bp TGGCCGCCAGCACCCGCCAGATGGCTTGCTGCTCGCCCTCTGAGATaGCCAGTAGCTCCATGGCACCCCGGAGCTGGGAAAATGCGGTGG +
Preference number: 1 (lower is better)
Translates to: WPPAPARWLAARPLR*PVAPWHPGAGKMRW
Trigger: CCACCGCATTTTCCCAGCTCCGGGGTGCCATGGAGCTACTGGGCATCTCAGAGGGCGAGCAGCAAGCCATCTGGCGGGTGCTGGCGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR GCA 90 bp CTGCTGGCAAAGGCCCTCCGAACCACACGACTCCGGTGCAGAGCCTaGTGGGAGGTACCCTCAAGCCCGGCCACTGCTCGGCACACAGGA +
Preference number: 1 (lower is better)
Translates to: LLAKALRTTRLRCRA*WEVPSSPATARHTG
Trigger: TCCTGTGTGCCGAGCAGTGGCCGGGCTTGAGGGTACCTCCCAGCAGGCTCTGCACCGGAGTCGTGTGGTTCGGAGGGCCTTTGCCAGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR GCA 90 bp CCGGCCCAGGGCCACAATGCTCTGGTCTCTCCGCTGGCTAAGCAGTaGCCAGTATGCACGCTGGGCCAGGGACGTTACGTGGGCAGGCAA +
Preference number: 1 (lower is better)
Translates to: PAQGHNALVSPLAKQ*PVCTLGQGRYVGRQ
Trigger: TTGCCTGCCCACGTAACGTCCCTGGCCCAGCGTGCATACTGGGCACTGCTTAGCCAGCGGAGAGACCAGAGCATTGTGGCCCTGGGCCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR CCA 90 bp CCAGCTCCACTCCGGCCCAGGGCCACAATGCTCTGGTCTCTCCGCTaGCTAAGCAGTGCCCAGTATGCACGCTGGGCCAGGGACGTTACG +
Preference number: 1 (lower is better)
Translates to: PAPLRPRATMLWSLR*LSSAQYARWARDVT
Trigger: CGTAACGTCCCTGGCCCAGCGTGCATACTGGGCACTGCTTAGCCAGCGGAGAGACCAGAGCATTGTGGCCCTGGGCCGGAGTGGAGCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR TCA 90 bp CCTCCAGGGCTGCGAGGTTGGGCTTGGCCCTTCGAAGCCAGCCTGTaGGGTCGTAGCGCACAGGGTCCCTTCCCAGCTGGTGGAAAAGCT +
Preference number: 1 (lower is better)
Translates to: PPGLRGWAWPFEASL*GRSAQGPFPAGGKA
Trigger: AGCTTTTCCACCAGCTGGGAAGGGACCCTGTGCGCTACGACCTCACAGGCTGGCTTCGAAGGGCCAAGCCCAACCTCGCAGCCCTGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR GCA 90 bp TATGCACGCTGGGCCAGGGACGTTACGTGGGCAGGCAAGCCATCCTaGCGACCACGGGGTACCTTCCCTGAAGAGGGCACTGTGGTCGTC +
Preference number: 1 (lower is better)
Translates to: YARWARDVTWAGKPS*RPRGTFPEEGTVVV
Trigger: GACGACCACAGTGCCCTCTTCAGGGAAGGTACCCCGTGGTCGGCAGGATGGCTTGCCTGCCCACGTAACGTCCCTGGCCCAGCGTGCATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR TCA 90 bp CTGGAGCTGAGCAGCTGTGACTCGGCCGGTGGCATTGAAGTCCAATaGCATCACCATGGCAAAGCGGGTGGCCCTGCGGCTGTGGCCGGT +
Preference number: 1 (lower is better)
Translates to: LELSSCDSAGGIEVQ*HHHGKAGGPAAVAG
Trigger: ACCGGCCACAGCCGCAGGGCCACCCGCTTTGCCATGGTGATGTCATTGGACTTCAATGCCACCGGCCGAGTCACAGCTGCTCAGCTCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR TCA 90 bp CACAGCCCAGGGCTTCAGCAGCGTGGTTGGCCCACTCAAACCGCATaGACTGCTTCCGGCCCACTTTGCACGCTCCTGCTGCACCCAGGT +
Preference number: 1 (lower is better)
Translates to: HSPGLQQRGWPTQTA*TASGPLCTLLLHPG
Trigger: ACCTGGGTGCAGCAGGAGCGTGCAAAGTGGGCCGGAAGCAGTTCATGCGGTTTGAGTGGGCCAACCACGCTGCTGAAGCCCTGGGCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR GCA 90 bp GGCCACAATGCTCTGGTCTCTCCGCTGGCTAAGCAGTGCCCAGTATaGACGCTGGGCCAGGGACGTTACGTGGGCAGGCAAGCCATCCTG +
Preference number: 1 (lower is better)
Translates to: GHNALVSPLAKQCPV*TLGQGRYVGRQAIL
Trigger: CAGGATGGCTTGCCTGCCCACGTAACGTCCCTGGCCCAGCGTGCATACTGGGCACTGCTTAGCCAGCGGAGAGACCAGAGCATTGTGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR CCA 90 bp TGGCTAAGCAGTGCCCAGTATGCACGCTGGGCCAGGGACGTTACGTaGGCAGGCAAGCCATCCTGCCGACCACGGGGTACCTTCCCTGAA +
Preference number: 1 (lower is better)
Translates to: WLSSAQYARWARDVT*AGKPSCRPRGTFPE
Trigger: TTCAGGGAAGGTACCCCGTGGTCGGCAGGATGGCTTGCCTGCCCACGTAACGTCCCTGGCCCAGCGTGCATACTGGGCACTGCTTAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR CCA 90 bp ATGCTCTGGTCTCTCCGCTGGCTAAGCAGTGCCCAGTATGCACGCTaGGCCAGGGACGTTACGTGGGCAGGCAAGCCATCCTGCCGACCA +
Preference number: 1 (lower is better)
Translates to: MLWSLRWLSSAQYAR*ARDVTWAGKPSCRP
Trigger: TGGTCGGCAGGATGGCTTGCCTGCCCACGTAACGTCCCTGGCCCAGCGTGCATACTGGGCACTGCTTAGCCAGCGGAGAGACCAGAGCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR CCA 90 bp GCCAGATGGCTTGCTGCTCGCCCTCTGAGATGCCCAGTAGCTCCATaGCACCCCGGAGCTGGGAAAATGCGGTGGCCGCCTTCTGCTTGT +
Preference number: 1 (lower is better)
Translates to: ARWLAARPLRCPVAP*HPGAGKMRWPPSAC
Trigger: ACAAGCAGAAGGCGGCCACCGCATTTTCCCAGCTCCGGGGTGCCATGGAGCTACTGGGCATCTCAGAGGGCGAGCAGCAAGCCATCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR TCA 90 bp GTACCTTCCCTGAAGAGGGCACTGTGGTCGTCTGTGGCTGCAGGGTaGTCAGATCAGGCCCCGAGCAGGTGTATGGCAGCTGAGCCCGGT +
Preference number: 1 (lower is better)
Translates to: VPSLKRALWSSVAAG*SDQAPSRCMAAEPG
Trigger: ACCGGGCTCAGCTGCCATACACCTGCTCGGGGCCTGATCTGATCACCCTGCAGCCACAGACGACCACAGTGCCCTCTTCAGGGAAGGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR TCA 90 bp TGGAAGAGGCTCTGCAGCTCCTCCCTCTTTGACTGCTGCAGGATTTaGGGGGCCTCCAGGGCTGCGAGGTTGGGCTTGGCCCTTCGAAGC +
Preference number: 1 (lower is better)
Translates to: WKRLCSSSLFDCCRI*GASRAARLGLALRS
Trigger: GCTTCGAAGGGCCAAGCCCAACCTCGCAGCCCTGGAGGCCCCTCAAATCCTGCAGCAGTCAAAGAGGGAGGAGCTGCAGAGCCTCTTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR GCA 90 bp CGGTGGCCGCCTTCTGCTTGTCTTCAGGCTTGGACCACAGGCCCATaGCGAAGGCACTGCTCTCTGCCATCTGATGCAGGTTCAGCTCTG +
Preference number: 1 (lower is better)
Translates to: RWPPSACLQAWTTGP*RRHCSLPSDAGSAL
Trigger: CAGAGCTGAACCTGCATCAGATGGCAGAGAGCAGTGCCTTCGGCATGGGCCTGTGGTCCAAGCCTGAAGACAAGCAGAAGGCGGCCACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR GCA 90 bp GCCTCATTGTCCTGTAGGCCCTGGCGCTGCGGCCCTGACGTCATCTaGTCGATAATCTGCCGTAGGTGGTGCTTGAAGGTGGCGGTGTTC +
Preference number: 1 (lower is better)
Translates to: ASLSCRPWRCGPDVI*SIICRRWCLKVAVF
Trigger: GAACACCGCCACCTTCAAGCACCACCTACGGCAGATTATCGAGCAGATGACGTCAGGGCCGCAGCGCCAGGGCCTACAGGACAATGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR CCA 90 bp GAGAGCCTGCGAGCTGAACCCTCAGTGCTGGGATGTCCAGAGCTGTaGGTTCGTTGGCTACACCTTGGTCCCCACTGGGCTGTGATGGTG +
Preference number: 1 (lower is better)
Translates to: ESLRAEPSVLGCPEL*VRWLHLGPHWAVMV
Trigger: CACCATCACAGCCCAGTGGGGACCAAGGTGTAGCCAACGAACCCACAGCTCTGGACATCCCAGCACTGAGGGTTCAGCTCGCAGGCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR TCA 90 bp GGCTGCCGGGCCACACGGCTATTCTCCAGAAGCACTGTCTGGAGCTaGGCAGCTGTGACTCGGCCGGTGGCATTGAAGTCCAATGACATC +
Preference number: 1 (lower is better)
Translates to: GCRATRLFSRSTVWS*AAVTRPVALKSNDI
Trigger: GATGTCATTGGACTTCAATGCCACCGGCCGAGTCACAGCTGCTCAGCTCCAGACAGTGCTTCTGGAGAATAGCCGTGTGGCCCGGCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR CCA 90 bp CTCAGTGCTGGGATGTCCAGAGCTGTGGGTTCGTTGGCTACACCTTaGTCCCCACTGGGCTGTGATGGTGATGGAGTCCTTTGCCCAGCC +
Preference number: 1 (lower is better)
Translates to: LSAGMSRAVGSLATP*SPLGCDGDGVLCPA
Trigger: GGCTGGGCAAAGGACTCCATCACCATCACAGCCCAGTGGGGACCAAGGTGTAGCCAACGAACCCACAGCTCTGGACATCCCAGCACTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR CCA 90 bp CGAGCTGAACCCTCAGTGCTGGGATGTCCAGAGCTGTGGGTTCGTTaGCTACACCTTGGTCCCCACTGGGCTGTGATGGTGATGGAGTCC +
Preference number: 1 (lower is better)
Translates to: RAEPSVLGCPELWVR*LHLGPHWAVMVMES
Trigger: GGACTCCATCACCATCACAGCCCAGTGGGGACCAAGGTGTAGCCAACGAACCCACAGCTCTGGACATCCCAGCACTGAGGGTTCAGCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR CCA 90 bp TCTGGGCCCATCCTATGTCTTGAGGGTGGCCATGTGTTCTGGCTCTaGATAGCAGGCCCCAGGAGCCTGGTCTCTCTCTCTCTCTCTCTC +
Preference number: 1 (lower is better)
Translates to: SGPILCLEGGHVFWL*IAGPRSLVSLSLSL
Trigger: GAGAGAGAGAGAGAGAGAGACCAGGCTCCTGGGGCCTGCTATCCAGAGCCAGAACACATGGCCACCCTCAAGACATAGGATGGGCCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
3UTR CCA 90 bp TGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGGCCATGTGTTCTaGCTCTGGATAGCAGGCCCCAGGAGCCTGGTCTCTCTCTCTCTC +
Preference number: 1 (lower is better)
Translates to: CLSGPILCLEGGHVF*LWIAGPRSLVSLSL
Trigger: GAGAGAGAGAGAGACCAGGCTCCTGGGGCCTGCTATCCAGAGCCAGAACACATGGCCACCCTCAAGACATAGGATGGGCCCAGAGAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
3UTR GCA 90 bp AAGGCTGCACGCAGACGCTCAAGTACAGTGCTGTCACTGGAGCCTTaGACCCGGACTTCTTCATCTAAGACCCAGAAGAGGCCCCCAGCA +
Preference number: 1 (lower is better)
Translates to: KAARRRSSTVLSLEP*TRTSSSKTQKRPPA
Trigger: TGCTGGGGGCCTCTTCTGGGTCTTAGATGAAGAAGTCCGGGTGCAAGGCTCCAGTGACAGCACTGTACTTGAGCGTCTGCGTGCAGCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR GCA 90 bp ATCCATCTGCAGCTTGATTTGGGCACAAGGAGCCTTCCTTTTCACTaGAGCAAGGCTGCTGGCAAAGGCCCTCCGAACCACACGACTCCG +
Preference number: 1 (lower is better)
Translates to: IHLQLDLGTRSLPFH*SKAAGKGPPNHTTP
Trigger: CGGAGTCGTGTGGTTCGGAGGGCCTTTGCCAGCAGCCTTGCTGCAGTGAAAAGGAAGGCTCCTTGTGCCCAAATCAAGCTGCAGATGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR GCA 90 bp GCTACACCTTGGTCCCCACTGGGCTGTGATGGTGATGGAGTCCTTTaGCCAGCCTTGCTTTCCACTGTGGTTGGCACAAGACAGTGGATG +
Preference number: 1 (lower is better)
Translates to: ATPWSPLGCDGDGVL*PALLSTVVGTRQWM
Trigger: CATCCACTGTCTTGTGCCAACCACAGTGGAAAGCAAGGCTGGGCAAAGGACTCCATCACCATCACAGCCCAGTGGGGACCAAGGTGTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR CCA 90 bp GTGGACCTGAGAGGGATTTTGATCCACTACAGCCACTGTAGTTCCTaGGGAGGACTCTGGGAGGTCAAAGGGCACGGGAATGCCTTCCTC +
Preference number: 1 (lower is better)
Translates to: VDLRGILIHYSHCSS*GGLWEVKGHGNAFL
Trigger: GAGGAAGGCATTCCCGTGCCCTTTGACCTCCCAGAGTCCTCCCCAGGAACTACAGTGGCTGTAGTGGATCAAAATCCCTCTCAGGTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR CCA 90 bp AGTGGCCGCCCGGTCCTTGCCCTGGTGCCTAGGATTTTGAAAGCCTaGAGTGTCAACCACCATGATAGAAGCCATAGACAGATGGTGGGA +
Preference number: 1 (lower is better)
Translates to: SGRPVLALVPRILKA*SVNHHDRSHRQMVG
Trigger: TCCCACCATCTGTCTATGGCTTCTATCATGGTGGTTGACACTCCAGGCTTTCAAAATCCTAGGCACCAGGGCAAGGACCGGGCGGCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR TCA 90 bp TCCTCGAAAGTGGCCGCCCGGTCCTTGCCCTGGTGCCTAGGATTTTaGAAGCCTGGAGTGTCAACCACCATGATAGAAGCCATAGACAGA +
Preference number: 1 (lower is better)
Translates to: SSKVAARSLPWCLGF*KPGVSTTMIEAIDR
Trigger: TCTGTCTATGGCTTCTATCATGGTGGTTGACACTCCAGGCTTTCAAAATCCTAGGCACCAGGGCAAGGACCGGGCGGCCACTTTCGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR GCA 90 bp CCTCCTTCTTCTTCTCAAAGGCTGCACGCAGACGCTCAAGTACAGTaGTGTCACTGGAGCCTTGCACCCGGACTTCTTCATCTAAGACCC +
Preference number: 1 (lower is better)
Translates to: PPSSSQRLHADAQVQ*CHWSLAPGLLHLRP
Trigger: GGGTCTTAGATGAAGAAGTCCGGGTGCAAGGCTCCAGTGACAGCACTGTACTTGAGCGTCTGCGTGCAGCCTTTGAGAAGAAGAAGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR CCA 90 bp TCTTCTCAAAGGCTGCACGCAGACGCTCAAGTACAGTGCTGTCACTaGAGCCTTGCACCCGGACTTCTTCATCTAAGACCCAGAAGAGGC +
Preference number: 1 (lower is better)
Translates to: SSQRLHADAQVQCCH*SLAPGLLHLRPRRG
Trigger: GCCTCTTCTGGGTCTTAGATGAAGAAGTCCGGGTGCAAGGCTCCAGTGACAGCACTGTACTTGAGCGTCTGCGTGCAGCCTTTGAGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR TCA 90 bp AGAGATGAGAATTGGGTGCTGAGTTACCATAAGGAGGAGGGTGGCTaGTCTAGGCAAGTGACTTTACTCACTTGGCTGTGCCCCACGGCC +
Preference number: 1 (lower is better)
Translates to: RDENWVLSYHKEEGG*SRQVTLLTWLCPTA
Trigger: GGCCGTGGGGCACAGCCAAGTGAGTAAAGTCACTTGCCTAGATCAGCCACCCTCCTCCTTATGGTAACTCAGCACCCAATTCTCATCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR GCA 90 bp CCAGCCTTGCTTTCCACTGTGGTTGGCACAAGACAGTGGATGAAATaGAGCCGAGACCTTCTCAGCAAGCTGATAAGAGCATCCATCTGC +
Preference number: 1 (lower is better)
Translates to: PALLSTVVGTRQWMK*SRDLLSKLIRASIC
Trigger: GCAGATGGATGCTCTTATCAGCTTGCTGAGAAGGTCTCGGCTGCATTTCATCCACTGTCTTGTGCCAACCACAGTGGAAAGCAAGGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR CCA 90 bp GTCCTTTGCCCAGCCTTGCTTTCCACTGTGGTTGGCACAAGACAGTaGATGAAATGCAGCCGAGACCTTCTCAGCAAGCTGATAAGAGCA +
Preference number: 1 (lower is better)
Translates to: VLCPALLSTVVGTRQ*MKCSRDLLSKLIRA
Trigger: TGCTCTTATCAGCTTGCTGAGAAGGTCTCGGCTGCATTTCATCCACTGTCTTGTGCCAACCACAGTGGAAAGCAAGGCTGGGCAAAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR GCA 90 bp GGTAGTCTCCTGACTGGGCTCTTCCGTCTAAGAACATCTTCAGGATaGATACAGTTCTTTCTGGAGCTCAGGTTATTTAAGGACCCAGGT +
Preference number: 1 (lower is better)
Translates to: GSLLTGLFRLRTSSG*IQFFLELRLFKDPG
Trigger: ACCTGGGTCCTTAAATAACCTGAGCTCCAGAAAGAACTGTATGCATCCTGAAGATGTTCTTAGACGGAAGAGCCCAGTCAGGAGACTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR TCA 90 bp TCTAAGAATGACATTTCTGGTGTCACATGGGACACTGTGTCATCTTaGCTTTGTAAGAGGGATGGGGACAGAAGTCATTTGTCCCCTGTA +
Preference number: 1 (lower is better)
Translates to: SKNDISGVTWDTVSS*LCKRDGDRSHLSPV
Trigger: TACAGGGGACAAATGACTTCTGTCCCCATCCCTCTTACAAAGTCAAGATGACACAGTGTCCCATGTGACACCAGAAATGTCATTCTTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR-3UTR CCA 90 bp GCTGCTGGCAAAGGCCCTCCGAACCACACGACTCCGGTGCAGAGCCTGCTGGGAGTGGCCCTGCGGCTGTaGCCGGTGGACACACAGCCA +
Preference number: 2 (lower is better)
Translates to: AAGKGPPNHTTPVQSLLGVALRL*PVDTQP
Trigger: TGGCTGTGTGTCCACCGGCCACAGCCGCAGGGCCAC...TCCCAGCAGGCTCTGCACCGGAGTCGTGTGGTTCGGAGGGCCTTTGCCAGCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR-3UTR GCA 90 bp GGGGCCTCCAGGGCTGCGAGGTTGGGCTTGGCCCTTCGAAGCCAGCCTGTGAGGACCCGCCAGATGGCTTaGTGCTCGCCCTCTGAGATG +
Preference number: 2 (lower is better)
Translates to: GASRAARLGLALRSQPVRTRQMA*CSPSEM
Trigger: CATCTCAGAGGGCGAGCAGCAAGCCATCTGGCGGGT...CCTCACAGGCTGGCTTCGAAGGGCCAAGCCCAACCTCGCAGCCCTGGAGGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR-3UTR GCA 90 bp AAGGCTGCACGCAGACGCTCAAGTACAGTGCTGTCACTGGAGCCTTGCACCCGGCAAAGCGGGTGGCCCTaGGGCTGTGGCCGGTGGACA +
Preference number: 2 (lower is better)
Translates to: KAARRRSSTVLSLEPCTRQSGWP*GCGRWT
Trigger: TGTCCACCGGCCACAGCCGCAGGGCCACCCGCTTTG...CCGGGTGCAAGGCTCCAGTGACAGCACTGTACTTGAGCGTCTGCGTGCAGCCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR-3UTR TCA 90 bp AAGGCTGCACGCAGACGCTCAAGTACAGTGCTGTCACTGGAGCCTTGCACCCGGCCGGAGCTTCTCCACTaGCACCCTGCCGTCCACGCT +
Preference number: 2 (lower is better)
Translates to: KAARRRSSTVLSLEPCTRPELLH*HPAVHA
Trigger: AGCGTGGACGGCAGGGTGTCAGTGGAGAAGCTCCGG...CCGGGTGCAAGGCTCCAGTGACAGCACTGTACTTGAGCGTCTGCGTGCAGCCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR-3UTR CCA 90 bp CAGCCCAGGGCTTCAGCAGCGTGGTTGGCCCACTCAAACCGCATGAACTGCTTCCACCCAGGTGGTAGATaGCCGCCAGCACCCGCCAGA +
Preference number: 2 (lower is better)
Translates to: QPRASAAWLAHSNRMNCFHPGGR*PPAPAR
Trigger: TCTGGCGGGTGCTGGCGGCCATCTACCACCTGGGTG...GAAGCAGTTCATGCGGTTTGAGTGGGCCAACCACGCTGCTGAAGCCCTGGGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR-3UTR GCA 90 bp GTGCTGGGATGTCCAGAGCTGTGGGTTCGTTGGCTACACCTTGGTCCCCACTGGGCCGTCCACGCTGCCTaGCATACCCACCAGGTGTTC +
Preference number: 2 (lower is better)
Translates to: VLGCPELWVRWLHLGPHWAVHAA*HTHQVF
Trigger: GAACACCTGGTGGGTATGGCAGGCAGCGTGGACGGC...CCAGTGGGGACCAAGGTGTAGCCAACGAACCCACAGCTCTGGACATCCCAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR CAA 90 bp TCTACACACTCCACACCTGTCATCTTCAGCCCTGAGCAGGCCTCATaGTCCTGTAGGCCCTGGCGCTGCGGCCCTGACGTCATCTGCTCG +
Preference number: 2 (lower is better)
Translates to: STHSTPVIFSPEQAS*SCRPWRCGPDVICS
Trigger: CGAGCAGATGACGTCAGGGCCGCAGCGCCAGGGCCTACAGGACAATGAGGCCTGCTCAGGGCTGAAGATGACAGGTGTGGAGTGTGTAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR-3UTR GCA 90 bp CAGCCCAGGGCTTCAGCAGCGTGGTTGGCCCACTCAAACCGCATGAACTGCTTCGCTCGCCCTCTGAGATaGCCAGTAGCTCCATGGCAC +
Preference number: 2 (lower is better)
Translates to: QPRASAAWLAHSNRMNCFARPLR*PVAPWH
Trigger: GTGCCATGGAGCTACTGGGCATCTCAGAGGGCGAGC...GAAGCAGTTCATGCGGTTTGAGTGGGCCAACCACGCTGCTGAAGCCCTGGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR-3UTR CCA 90 bp GTCAAGTCAAGCTTCTTTAGCAGTGCAGGGTCCAGCACCTGGAACCGACGGCGGCTGCGAGGTTGGGCTTaGCCCTTCGAAGCCAGCCTG +
Preference number: 2 (lower is better)
Translates to: VKSSFFSSAGSSTWNRRRLRGWA*PFEASL
Trigger: CAGGCTGGCTTCGAAGGGCCAAGCCCAACCTCGCAG...CCGCCGTCGGTTCCAGGTGCTGGACCCTGCACTGCTAAAGAAGCTTGACTTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR-3UTR GCA 90 bp TCAGCCCCAGCCTCCTTCTTCTTCTCAAAGGCTGCACGCAGACGCTCAAGTACAGGCCCAGGGCCACAATaGTCTGGTCTCTCCGCTGGC +
Preference number: 2 (lower is better)
Translates to: SAPASFFFSKAARRRSSTGPGPQ*SGLSAG
Trigger: GCCAGCGGAGAGACCAGAGCATTGTGGCCCTGGGCC...TGTACTTGAGCGTCTGCGTGCAGCCTTTGAGAAGAAGAAGGAGGCTGGGGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR-3UTR GCA 90 bp CACTTGGCTGTGCCCCACGGCCACAGCTTTCTTCTCCAGATCCAGGGTCTTCAAAAGTTTCCTTCCCCTTaGGGCTGCCGGGCCACACGG +
Preference number: 2 (lower is better)
Translates to: HLAVPHGHSFLLQIQGLQKFPSP*GCRATR
Trigger: CCGTGTGGCCCGGCAGCCGCAAGGGGAAGGAAACTT...TTGAAGACCCTGGATCTGGAGAAGAAAGCTGTGGCCGTGGGGCACAGCCAAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR-3UTR CCA 90 bp GGAGCTGGGAAAATGCGGTGGCCGCCTTCTGCTTGTCTTCAGGCTTGGACCACACTGAAGAGGGCACTGTaGTCGTCTGTGGCTGCAGGG +
Preference number: 2 (lower is better)
Translates to: GAGKMRWPPSACLQAWTTLKRAL*SSVAAG
Trigger: CCCTGCAGCCACAGACGACCACAGTGCCCTCTTCAG...TGTGGTCCAAGCCTGAAGACAAGCAGAAGGCGGCCACCGCATTTTCCCAGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR-3UTR CCA 90 bp TCGGAGGTCAAGTCAAGCTTCTTTAGCAGTGCAGGGTCCAGCACCTGGAACCGAAGCTTGGCCCGGGCCTaGAAGAGGCTCTGCAGCTCC +
Preference number: 2 (lower is better)
Translates to: SEVKSSFFSSAGSSTWNRSLARA*KRLCSS
Trigger: GGAGCTGCAGAGCCTCTTCCAGGCCCGGGCCAAGCT...TCGGTTCCAGGTGCTGGACCCTGCACTGCTAAAGAAGCTTGACTTGACCTCCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR-3UTR TCA 90 bp GTCAAGTCAAGCTTCTTTAGCAGTGCAGGGTCCAGCACCTGGAACCGACGGCGGCTCGGCCGGTGGCATTaGAGTCCAATGACATCACCA +
Preference number: 2 (lower is better)
Translates to: VKSSFFSSAGSSTWNRRRLGRWH*SPMTSP
Trigger: TGGTGATGTCATTGGACTTCAATGCCACCGGCCGAG...CCGCCGTCGGTTCCAGGTGCTGGACCCTGCACTGCTAAAGAAGCTTGACTTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR-3UTR TCA 90 bp GAGACCACAGCCACGAAGAGTTCTTGGTACAGGCCAGAGGCCATCCCCTCTACAGCCGTAGGTGGTGCTTaGAGGTGGCGGTGTTCAGTT +
Preference number: 2 (lower is better)
Translates to: ETTATKSSWYRPEAIPSTAVGGA*RWRCSV
Trigger: AACTGAACACCGCCACCTTCAAGCACCACCTACGGC...TGTAGAGGGGATGGCCTCTGGCCTGTACCAAGAACTCTTCGTGGCTGTGGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR-3UTR GCA 90 bp TCGGAGGTCAAGTCAAGCTTCTTTAGCAGTGCAGGGTCCAGCACCTGGAACCGAAAGCAGTGCCCAGTATaGACGCTGGGCCAGGGACGT +
Preference number: 2 (lower is better)
Translates to: SEVKSSFFSSAGSSTWNRKQCPV*TLGQGR
Trigger: ACGTCCCTGGCCCAGCGTGCATACTGGGCACTGCTT...TCGGTTCCAGGTGCTGGACCCTGCACTGCTAAAGAAGCTTGACTTGACCTCCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR-3UTR GCA 90 bp GGGCATAATTGTAACAGAGCTCCTCGAAAGTGGCCGCCCGGTCCTTGCCCTGGTCACTTTGCACGCTCCTaGTGCACCCAGGTGGTAGAT +
Preference number: 2 (lower is better)
Translates to: GHNCNRAPRKWPPGPCPGHFARS*CTQVVD
Trigger: ATCTACCACCTGGGTGCAGCAGGAGCGTGCAAAGTG...ACCAGGGCAAGGACCGGGCGGCCACTTTCGAGGAGCTCTGTTACAATTATGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR-3UTR CCA 90 bp CATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGGCCATGTGTTCTGGCTCTCAGGCCCCAGGAGCCTaGTCTCTCTCTCTCTCTCTC +
Preference number: 2 (lower is better)
Translates to: HVSLGPSYVLRVAMCSGSQAPGA*SLSLSL
Trigger: GAGAGAGAGAGAGAGAGACCAGGCTCCTGGGGCCTG...AGAGCCAGAACACATGGCCACCCTCAAGACATAGGATGGGCCCAGAGAGACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
3UTR-3UTR CCA 90 bp GAGACCACAGCCACGAAGAGTTCTTGGTACAGGCCAGAGGCCATCCCCTCTACAGCTTGTCTTCAGGCTTaGACCACAGGCCCATGCCGA +
Preference number: 2 (lower is better)
Translates to: ETTATKSSWYRPEAIPSTACLQA*TTGPCR
Trigger: TCGGCATGGGCCTGTGGTCCAAGCCTGAAGACAAGC...TGTAGAGGGGATGGCCTCTGGCCTGTACCAAGAACTCTTCGTGGCTGTGGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR-3UTR GCA 90 bp GGAGCTGGGAAAATGCGGTGGCCGCCTTCTGCTTGTCTTCAGGCTTGGACCACAGAAGGCACTGCTCTCTaGCATCTGATGCAGGTTCAG +
Preference number: 2 (lower is better)
Translates to: GAGKMRWPPSACLQAWTTEGTAL*HLMQVQ
Trigger: CTGAACCTGCATCAGATGGCAGAGAGCAGTGCCTTC...TGTGGTCCAAGCCTGAAGACAAGCAGAAGGCGGCCACCGCATTTTCCCAGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR-3UTR GCA 90 bp GAGACCACAGCCACGAAGAGTTCTTGGTACAGGCCAGAGGCCATCCCCTCTACAATCTGCCGTAGGTGGTaGTTGAAGGTGGCGGTGTTC +
Preference number: 2 (lower is better)
Translates to: ETTATKSSWYRPEAIPSTICRRW*LKVAVF
Trigger: GAACACCGCCACCTTCAAGCACCACCTACGGCAGAT...TGTAGAGGGGATGGCCTCTGGCCTGTACCAAGAACTCTTCGTGGCTGTGGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR-3UTR CCA 90 bp CTCTTGAATTTCCTGGGCCAGGGGACTCTAAGAATGACATTTCTGGTGTCACATCCATGGCAAAGCGGGTaGCCCTGCGGCTGTGGCCGG +
Preference number: 2 (lower is better)
Translates to: LLNFLGQGTLRMTFLVSHPWQSG*PCGCGR
Trigger: CCGGCCACAGCCGCAGGGCCACCCGCTTTGCCATGG...ATGTGACACCAGAAATGTCATTCTTAGAGTCCCCTGGCCCAGGAAATTCAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR CAA 90 bp CTCCTCGAAAGTGGCCGCCCGGTCCTTGCCCTGGTGCCTAGGATTTaGAAAGCCTGGAGTGTCAACCACCATGATAGAAGCCATAGACAG +
Preference number: 2 (lower is better)
Translates to: LLESGRPVLALVPRI*KAWSVNHHDRSHRQ
Trigger: CTGTCTATGGCTTCTATCATGGTGGTTGACACTCCAGGCTTTCAAAATCCTAGGCACCAGGGCAAGGACCGGGCGGCCACTTTCGAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR-3UTR TCA 90 bp TCGGAGGTCAAGTCAAGCTTCTTTAGCAGTGCAGGGTCCAGCACCTGGAACCGACAGCTCCTCCCTCTTTaGCTGCTGCAGGATTTGAGG +
Preference number: 2 (lower is better)
Translates to: SEVKSSFFSSAGSSTWNRQLLPL*LLQDLR
Trigger: CCTCAAATCCTGCAGCAGTCAAAGAGGGAGGAGCTG...TCGGTTCCAGGTGCTGGACCCTGCACTGCTAAAGAAGCTTGACTTGACCTCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR-3UTR GCA 90 bp AAGGGCACGGGAATGCCTTCCTCTTTGTATCTCTCCAGAGTAGAGACAAAGGTCTCTCCACTGACACCCTaGCGTCCACGCTGCCTGCCA +
Preference number: 2 (lower is better)
Translates to: KGTGMPSSLYLSRVETKVSPLTP*RPRCLP
Trigger: TGGCAGGCAGCGTGGACGGCAGGGTGTCAGTGGAGA...GACCTTTGTCTCTACTCTGGAGAGATACAAAGAGGAAGGCATTCCCGTGCCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR-3UTR CCA 90 bp TCGGAGGTCAAGTCAAGCTTCTTTAGCAGTGCAGGGTCCAGCACCTGGAACCGAGCTGGGAAAATGCGGTaGCCGCCTTCTGCTTGTCTT +
Preference number: 2 (lower is better)
Translates to: SEVKSSFFSSAGSSTWNRAGKMR*PPSACL
Trigger: AAGACAAGCAGAAGGCGGCCACCGCATTTTCCCAGC...TCGGTTCCAGGTGCTGGACCCTGCACTGCTAAAGAAGCTTGACTTGACCTCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR-3UTR CCA 90 bp ACCTTCCTTTCATCCAGTTCCTCGGAGGTCAAGTCAAGCTTCTTTAGCAGTGCAACACAGGAGGCAGCTTaGCCCGGGCCTGGAAGAGGC +
Preference number: 2 (lower is better)
Translates to: TFLSSSSSEVKSSFFSSATQEAA*PGPGRG
Trigger: GCCTCTTCCAGGCCCGGGCCAAGCTGCCTCCTGTGT...TGCACTGCTAAAGAAGCTTGACTTGACCTCCGAGGAACTGGATGAAAGGAAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR-3UTR CCA 90 bp GTGCTGGGATGTCCAGAGCTGTGGGTTCGTTGGCTACACCTTGGTCCCCACTGGATCTGCAGCTTGATTTaGGCACAAGGAGCCTTCCTT +
Preference number: 2 (lower is better)
Translates to: VLGCPELWVRWLHLGPHWICSLI*AQGAFL
Trigger: AAGGAAGGCTCCTTGTGCCCAAATCAAGCTGCAGAT...CCAGTGGGGACCAAGGTGTAGCCAACGAACCCACAGCTCTGGACATCCCAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR-3UTR TCA 90 bp GAGACCACAGCCACGAAGAGTTCTTGGTACAGGCCAGAGGCCATCCCCTCTACAGGCATTGAAGTCCAATaGCATCACCATGGCAAAGCG +
Preference number: 2 (lower is better)
Translates to: ETTATKSSWYRPEAIPSTGIEVQ*HHHGKA
Trigger: CGCTTTGCCATGGTGATGTCATTGGACTTCAATGCC...TGTAGAGGGGATGGCCTCTGGCCTGTACCAAGAACTCTTCGTGGCTGTGGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR-3UTR CCA 90 bp CTTTCATCCAGTTCCTCGGAGGTCAAGTCAAGCTTCTTTAGCAGTGCAGGGTCCAGGGCCACAATGCTCTaGTCTCTCCGCTGGCTAAGC +
Preference number: 2 (lower is better)
Translates to: LSSSSSEVKSSFFSSAGSRATML*SLRWLS
Trigger: GCTTAGCCAGCGGAGAGACCAGAGCATTGTGGCCCT...GGACCCTGCACTGCTAAAGAAGCTTGACTTGACCTCCGAGGAACTGGATGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR-3UTR CCA 90 bp CTCTTGAATTTCCTGGGCCAGGGGACTCTAAGAATGACATTTCTGGTGTCACATTGCGGCTGTGGCCGGTaGACACACAGCCAAAGGCCC +
Preference number: 2 (lower is better)
Translates to: LLNFLGQGTLRMTFLVSHCGCGR*THSQRP
Trigger: GGGCCTTTGGCTGTGTGTCCACCGGCCACAGCCGCA...ATGTGACACCAGAAATGTCATTCTTAGAGTCCCCTGGCCCAGGAAATTCAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR-3UTR CCA 90 bp AACTGCTCTAGGCTCTTGAATTTCCTGGGCCAGGGGACTCTAAGAATGACATTTCCAGCACCCGCCAGATaGCTTGCTGCTCGCCCTCTG +
Preference number: 2 (lower is better)
Translates to: NCSRLLNFLGQGTLRMTFPAPAR*LAARPL
Trigger: CAGAGGGCGAGCAGCAAGCCATCTGGCGGGTGCTGG...AAATGTCATTCTTAGAGTCCCCTGGCCCAGGAAATTCAAGAGCCTAGAGCAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR-3UTR CCA 90 bp CATCCTCAGCACCTCTTCCAGCTGGTAAGTGGACCTGAGAGGGATTTTGATCCAAGCCACTGTAGTTCCTaGGGAGGACTCTGGGAGGTC +
Preference number: 2 (lower is better)
Translates to: HPQHLFQLVSGPERDFDPSHCSS*GGLWEV
Trigger: GACCTCCCAGAGTCCTCCCCAGGAACTACAGTGGCT...TGGATCAAAATCCCTCTCAGGTCCACTTACCAGCTGGAAGAGGTGCTGAGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR-3UTR TCA 90 bp CTCTTGAATTTCCTGGGCCAGGGGACTCTAAGAATGACATTTCTGGTGTCACATAGCACTGTCTGGAGCTaGGCAGCTGTGACTCGGCCG +
Preference number: 2 (lower is better)
Translates to: LLNFLGQGTLRMTFLVSHSTVWS*AAVTRP
Trigger: CGGCCGAGTCACAGCTGCTCAGCTCCAGACAGTGCT...ATGTGACACCAGAAATGTCATTCTTAGAGTCCCCTGGCCCAGGAAATTCAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR-3UTR GCA 90 bp CACTTGGCTGTGCCCCACGGCCACAGCTTTCTTCTCCAGATCCAGGGTCTTCAAATCTGCTCGATAATCTaGCGTAGGTGGTGCTTGAAG +
Preference number: 2 (lower is better)
Translates to: HLAVPHGHSFLLQIQGLQICSII*RRWCLK
Trigger: CTTCAAGCACCACCTACGGCAGATTATCGAGCAGAT...TTGAAGACCCTGGATCTGGAGAAGAAAGCTGTGGCCGTGGGGCACAGCCAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR-3UTR GCA 90 bp GTGCTGGGATGTCCAGAGCTGTGGGTTCGTTGGCTACACCTTGGTCCCCACTGGATAAGAGCATCCATCTaGAGCTTGATTTGGGCACAA +
Preference number: 2 (lower is better)
Translates to: VLGCPELWVRWLHLGPHWIRASI*SLIWAQ
Trigger: TTGTGCCCAAATCAAGCTGCAGATGGATGCTCTTAT...CCAGTGGGGACCAAGGTGTAGCCAACGAACCCACAGCTCTGGACATCCCAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR-3UTR GCA 90 bp TCGGAGGTCAAGTCAAGCTTCTTTAGCAGTGCAGGGTCCAGCACCTGGAACCGAAGACAGTGGATGAAATaGAGCCGAGACCTTCTCAGC +
Preference number: 2 (lower is better)
Translates to: SEVKSSFFSSAGSSTWNRRQWMK*SRDLLS
Trigger: GCTGAGAAGGTCTCGGCTGCATTTCATCCACTGTCT...TCGGTTCCAGGTGCTGGACCCTGCACTGCTAAAGAAGCTTGACTTGACCTCCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR CAA 90 bp AGACCTTCTCAGCAAGCTGATAAGAGCATCCATCTGCAGCTTGATTaGGGCACAAGGAGCCTTCCTTTTCACTGCAGCAAGGCTGCTGGC +
Preference number: 2 (lower is better)
Translates to: RPSQQADKSIHLQLD*GTRSLPFHCSKAAG
Trigger: GCCAGCAGCCTTGCTGCAGTGAAAAGGAAGGCTCCTTGTGCCCAAATCAAGCTGCAGATGGATGCTCTTATCAGCTTGCTGAGAAGGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR CAA 90 bp AGCCGAGACCTTCTCAGCAAGCTGATAAGAGCATCCATCTGCAGCTaGATTTGGGCACAAGGAGCCTTCCTTTTCACTGCAGCAAGGCTG +
Preference number: 2 (lower is better)
Translates to: SRDLLSKLIRASICS*IWAQGAFLFTAARL
Trigger: CAGCCTTGCTGCAGTGAAAAGGAAGGCTCCTTGTGCCCAAATCAAGCTGCAGATGGATGCTCTTATCAGCTTGCTGAGAAGGTCTCGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR-3UTR TCA 90 bp GTCAAAGGGCACGGGAATGCCTTCCTCTTTGTATCTCTCCAGAGTAGAGACAAACCCACTCAAACCGCATaGACTGCTTCCGGCCCACTT +
Preference number: 2 (lower is better)
Translates to: VKGHGNAFLFVSLQSRDKPTQTA*TASGPL
Trigger: AAGTGGGCCGGAAGCAGTTCATGCGGTTTGAGTGGG...TTTGTCTCTACTCTGGAGAGATACAAAGAGGAAGGCATTCCCGTGCCCTTTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR-3UTR GCA 90 bp GTCAAAGGGCACGGGAATGCCTTCCTCTTTGTATCTCTCCAGAGTAGAGACAAATTTGCACGCTCCTGCTaGACCCAGGTGGTAGATGGC +
Preference number: 2 (lower is better)
Translates to: VKGHGNAFLFVSLQSRDKFARSC*TQVVDG
Trigger: GCCATCTACCACCTGGGTGCAGCAGGAGCGTGCAAA...TTTGTCTCTACTCTGGAGAGATACAAAGAGGAAGGCATTCCCGTGCCCTTTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR-3UTR CCA 90 bp CATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGGCCATGTGTTCTGGCTCTTTCTCTCCAGTGCTTTaGAGTAGGGAGTCTCTGACA +
Preference number: 2 (lower is better)
Translates to: HVSLGPSYVLRVAMCSGSFSPVL*SRESLT
Trigger: TGTCAGAGACTCCCTACTCCAAAGCACTGGAGAGAA...AGAGCCAGAACACATGGCCACCCTCAAGACATAGGATGGGCCCAGAGAGACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
3UTR-3UTR CCA 90 bp CTCTTGAATTTCCTGGGCCAGGGGACTCTAAGAATGACATTTCTGGTGTCACATTGCCCAGTAGCTCCATaGCACCCCGGAGCTGGGAAA +
Preference number: 2 (lower is better)
Translates to: LLNFLGQGTLRMTFLVSHCPVAP*HPGAGK
Trigger: TTTCCCAGCTCCGGGGTGCCATGGAGCTACTGGGCA...ATGTGACACCAGAAATGTCATTCTTAGAGTCCCCTGGCCCAGGAAATTCAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR-3UTR CCA 90 bp GTCAAGTCAAGCTTCTTTAGCAGTGCAGGGTCCAGCACCTGGAACCGACGGCGGAGGATTTTGAAAGCCTaGAGTGTCAACCACCATGAT +
Preference number: 2 (lower is better)
Translates to: VKSSFFSSAGSSTWNRRRRILKA*SVNHHD
Trigger: ATCATGGTGGTTGACACTCCAGGCTTTCAAAATCCT...CCGCCGTCGGTTCCAGGTGCTGGACCCTGCACTGCTAAAGAAGCTTGACTTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR-3UTR TCA 90 bp TTTCATCCAGTTCCTCGGAGGTCAAGTCAAGCTTCTTTAGCAGTGCAGGGTCCAGGTTCAGCTCTGTCCTaGGATCTACATCCATCCCAG +
Preference number: 2 (lower is better)
Translates to: FHPVPRRSSQASLAVQGPGSALS*DLHPSQ
Trigger: CTGGGATGGATGTAGATCTCAGGACAGAGCTGAACC...TGGACCCTGCACTGCTAAAGAAGCTTGACTTGACCTCCGAGGAACTGGATGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR-3UTR CCA 90 bp TTTCATCCAGTTCCTCGGAGGTCAAGTCAAGCTTCTTTAGCAGTGCAGGGTCCAATAATCTGCCGTAGGTaGTGCTTGAAGGTGGCGGTG +
Preference number: 2 (lower is better)
Translates to: FHPVPRRSSQASLAVQGPIICRR*CLKVAV
Trigger: CACCGCCACCTTCAAGCACCACCTACGGCAGATTAT...TGGACCCTGCACTGCTAAAGAAGCTTGACTTGACCTCCGAGGAACTGGATGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR-3UTR CCA 90 bp CTCTTGAATTTCCTGGGCCAGGGGACTCTAAGAATGACATTTCTGGTGTCACATCTCTGGTCTCTCCGCTaGCTAAGCAGTGCCCAGTAT +
Preference number: 2 (lower is better)
Translates to: LLNFLGQGTLRMTFLVSHLWSLR*LSSAQY
Trigger: ATACTGGGCACTGCTTAGCCAGCGGAGAGACCAGAG...ATGTGACACCAGAAATGTCATTCTTAGAGTCCCCTGGCCCAGGAAATTCAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR-3UTR TCA 90 bp CTTTCATCCAGTTCCTCGGAGGTCAAGTCAAGCTTCTTTAGCAGTGCAGGGTCCATCCCAGCCAGCAGCTaGGAGAAAACTTCAAAGTTT +
Preference number: 2 (lower is better)
Translates to: LSSSSSEVKSSFFSSAGSIPASS*EKTSKF
Trigger: AAACTTTGAAGTTTTCTCTCAGCTGCTGGCTGGGAT...GGACCCTGCACTGCTAAAGAAGCTTGACTTGACCTCCGAGGAACTGGATGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR-3UTR CCA 90 bp ACCTTCCTTTCATCCAGTTCCTCGGAGGTCAAGTCAAGCTTCTTTAGCAGTGCACCTTGCTTTCCACTGTaGTTGGCACAAGACAGTGGA +
Preference number: 2 (lower is better)
Translates to: TFLSSSSSEVKSSFFSSAPCFPL*LAQDSG
Trigger: TCCACTGTCTTGTGCCAACCACAGTGGAAAGCAAGG...TGCACTGCTAAAGAAGCTTGACTTGACCTCCGAGGAACTGGATGAAAGGAAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR-3UTR CCA 90 bp AACTGCTCTAGGCTCTTGAATTTCCTGGGCCAGGGGACTCTAAGAATGACATTTGCCATAGACAGATGGTaGGAGGAGAAGGATCTGTTG +
Preference number: 2 (lower is better)
Translates to: NCSRLLNFLGQGTLRMTFAIDRW*EEKDLL
Trigger: CAACAGATCCTTCTCCTCCCACCATCTGTCTATGGC...AAATGTCATTCTTAGAGTCCCCTGGCCCAGGAAATTCAAGAGCCTAGAGCAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR-3UTR CCA 90 bp CTCTTGAATTTCCTGGGCCAGGGGACTCTAAGAATGACATTTCTGGTGTCACATCCCAGAGATGAGAATTaGGTGCTGAGTTACCATAAG +
Preference number: 2 (lower is better)
Translates to: LLNFLGQGTLRMTFLVSHPRDEN*VLSYHK
Trigger: CTTATGGTAACTCAGCACCCAATTCTCATCTCTGGG...ATGTGACACCAGAAATGTCATTCTTAGAGTCCCCTGGCCCAGGAAATTCAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR CCA 72 bp GCCCTCCGAACCACACGACTCCGGTGCAGAGCCTGCTaGGAGGTACCCTCAAGCCCGGCCACTGCTCGGCAC +
Preference number: 3 (lower is better)
Translates to: ALRTTRLRCRAC*EVPSSPATARH
Trigger: GTGCCGAGCAGTGGCCGGGCTTGAGGGTACCTCCCAGCAGGCTCTGCACCGGAGTCGTGTGGTTCGGAGGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR GCA 72 bp CCGCATGAACTGCTTCCGGCCCACTTTGCACGCTCCTaGTGCACCCAGGTGGTAGATGGCCGCCAGCACCCG +
Preference number: 3 (lower is better)
Translates to: PHELLPAHFARS*CTQVVDGRQHP
Trigger: CGGGTGCTGGCGGCCATCTACCACCTGGGTGCAGCAGGAGCGTGCAAAGTGGGCCGGAAGCAGTTCATGCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR CCA 72 bp CTCCGGCCCAGGGCCACAATGCTCTGGTCTCTCCGCTaGCTAAGCAGTGCCCAGTATGCACGCTGGGCCAGG +
Preference number: 3 (lower is better)
Translates to: LRPRATMLWSLR*LSSAQYARWAR
Trigger: CCTGGCCCAGCGTGCATACTGGGCACTGCTTAGCCAGCGGAGAGACCAGAGCATTGTGGCCCTGGGCCGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR TCA 72 bp CTGCGAGGTTGGGCTTGGCCCTTCGAAGCCAGCCTGTaGGGTCGTAGCGCACAGGGTCCCTTCCCAGCTGGT +
Preference number: 3 (lower is better)
Translates to: LRGWAWPFEASL*GRSAQGPFPAG
Trigger: ACCAGCTGGGAAGGGACCCTGTGCGCTACGACCTCACAGGCTGGCTTCGAAGGGCCAAGCCCAACCTCGCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR GCA 72 bp GCACCCGCCAGATGGCTTGCTGCTCGCCCTCTGAGATaGCCAGTAGCTCCATGGCACCCCGGAGCTGGGAAA +
Preference number: 3 (lower is better)
Translates to: APARWLAARPLR*PVAPWHPGAGK
Trigger: TTTCCCAGCTCCGGGGTGCCATGGAGCTACTGGGCATCTCAGAGGGCGAGCAGCAAGCCATCTGGCGGGTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR GCA 72 bp CATGAACTGCTTCCGGCCCACTTTGCACGCTCCTGCTaGACCCAGGTGGTAGATGGCCGCCAGCACCCGCCA +
Preference number: 3 (lower is better)
Translates to: HELLPAHFARSC*TQVVDGRQHPP
Trigger: TGGCGGGTGCTGGCGGCCATCTACCACCTGGGTGCAGCAGGAGCGTGCAAAGTGGGCCGGAAGCAGTTCATG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR CCA 72 bp CACCCAGGTGGTAGATGGCCGCCAGCACCCGCCAGATaGCTTGCTGCTCGCCCTCTGAGATGCCCAGTAGCT +
Preference number: 3 (lower is better)
Translates to: HPGGRWPPAPAR*LAARPLRCPVA
Trigger: AGCTACTGGGCATCTCAGAGGGCGAGCAGCAAGCCATCTGGCGGGTGCTGGCGGCCATCTACCACCTGGGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR-3UTR CAA 90 bp GGGGCCTCCAGGGCTGCGAGGTTGGGCTTGGCCCTTCGAAGCCAGCCTGTGAGGAGCCACGAAGAGTTCTaGGTACAGGCCAGAGGCCAT +
Preference number: 3 (lower is better)
Translates to: GASRAARLGLALRSQPVRSHEEF*VQARGH
Trigger: ATGGCCTCTGGCCTGTACCAAGAACTCTTCGTGGCT...CCTCACAGGCTGGCTTCGAAGGGCCAAGCCCAACCTCGCAGCCCTGGAGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR GCA 72 bp GCTCTGGTCTCTCCGCTGGCTAAGCAGTGCCCAGTATaGACGCTGGGCCAGGGACGTTACGTGGGCAGGCAA +
Preference number: 3 (lower is better)
Translates to: ALVSPLAKQCPV*TLGQGRYVGRQ
Trigger: TTGCCTGCCCACGTAACGTCCCTGGCCCAGCGTGCATACTGGGCACTGCTTAGCCAGCGGAGAGACCAGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR GCA 72 bp CCCGGAGCTTCTCCACTGACACCCTGCCGTCCACGCTaGCTGCCATACCCACCAGGTGTTCCAGAACCTGCT +
Preference number: 3 (lower is better)
Translates to: PGASPLTPCRPR*LPYPPGVPEPA
Trigger: AGCAGGTTCTGGAACACCTGGTGGGTATGGCAGGCAGCGTGGACGGCAGGGTGTCAGTGGAGAAGCTCCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR CCA 72 bp TCTCTCCGCTGGCTAAGCAGTGCCCAGTATGCACGCTaGGCCAGGGACGTTACGTGGGCAGGCAAGCCATCC +
Preference number: 3 (lower is better)
Translates to: SLRWLSSAQYAR*ARDVTWAGKPS
Trigger: GGATGGCTTGCCTGCCCACGTAACGTCCCTGGCCCAGCGTGCATACTGGGCACTGCTTAGCCAGCGGAGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR TCA 72 bp GGGCTTCAGCAGCGTGGTTGGCCCACTCAAACCGCATaGACTGCTTCCGGCCCACTTTGCACGCTCCTGCTG +
Preference number: 3 (lower is better)
Translates to: GLQQRGWPTQTA*TASGPLCTLLL
Trigger: CAGCAGGAGCGTGCAAAGTGGGCCGGAAGCAGTTCATGCGGTTTGAGTGGGCCAACCACGCTGCTGAAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR GCA 72 bp GGCCACAATGCTCTGGTCTCTCCGCTGGCTAAGCAGTaGCCAGTATGCACGCTGGGCCAGGGACGTTACGTG +
Preference number: 3 (lower is better)
Translates to: GHNALVSPLAKQ*PVCTLGQGRYV
Trigger: CACGTAACGTCCCTGGCCCAGCGTGCATACTGGGCACTGCTTAGCCAGCGGAGAGACCAGAGCATTGTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR GCA 72 bp TCAGCAGCGTGGTTGGCCCACTCAAACCGCATGAACTaGTTCCGGCCCACTTTGCACGCTCCTGCTGCACCC +
Preference number: 3 (lower is better)
Translates to: SAAWLAHSNRMN*FRPTLHAPAAP
Trigger: GGGTGCAGCAGGAGCGTGCAAAGTGGGCCGGAAGCAGTTCATGCGGTTTGAGTGGGCCAACCACGCTGCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR CCA 72 bp TTCCCAGCTCCACTCCGGCCCAGGGCCACAATGCTCTaGTCTCTCCGCTGGCTAAGCAGTGCCCAGTATGCA +
Preference number: 3 (lower is better)
Translates to: FPAPLRPRATML*SLRWLSSAQYA
Trigger: TGCATACTGGGCACTGCTTAGCCAGCGGAGAGACCAGAGCATTGTGGCCCTGGGCCGGAGTGGAGCTGGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR-3UTR CAA 90 bp AAGGCTGCACGCAGACGCTCAAGTACAGTGCTGTCACTGGAGCCTTGCACCCGGTGCTTGTCTTCAGGCTaGGACCACAGGCCCATGCCG +
Preference number: 3 (lower is better)
Translates to: KAARRRSSTVLSLEPCTRCLSSG*DHRPMP
Trigger: CGGCATGGGCCTGTGGTCCAAGCCTGAAGACAAGCA...CCGGGTGCAAGGCTCCAGTGACAGCACTGTACTTGAGCGTCTGCGTGCAGCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR GCA 72 bp TCCTGTAGGCCCTGGCGCTGCGGCCCTGACGTCATCTaGTCGATAATCTGCCGTAGGTGGTGCTTGAAGGTG +
Preference number: 3 (lower is better)
Translates to: SCRPWRCGPDVI*SIICRRWCLKV
Trigger: CACCTTCAAGCACCACCTACGGCAGATTATCGAGCAGATGACGTCAGGGCCGCAGCGCCAGGGCCTACAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR GCA 72 bp GGGCACAAGGAGCCTTCCTTTTCACTGCAGCAAGGCTaGTGGCAAAGGCCCTCCGAACCACACGACTCCGGT +
Preference number: 3 (lower is better)
Translates to: GHKEPSFSLQQG*WQRPSEPHDSG
Trigger: ACCGGAGTCGTGTGGTTCGGAGGGCCTTTGCCAGCAGCCTTGCTGCAGTGAAAAGGAAGGCTCCTTGTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR-3UTR CAA 90 bp GGGCATAATTGTAACAGAGCTCCTCGAAAGTGGCCGCCCGGTCCTTGCCCTGGTGCTTCAGCAGCGTGGTaGGCCCACTCAAACCGCATG +
Preference number: 3 (lower is better)
Translates to: GHNCNRAPRKWPPGPCPGASAAW*AHSNRM
Trigger: CATGCGGTTTGAGTGGGCCAACCACGCTGCTGAAGC...ACCAGGGCAAGGACCGGGCGGCCACTTTCGAGGAGCTCTGTTACAATTATGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR-3UTR CAA 90 bp GCTGCTGGCAAAGGCCCTCCGAACCACACGACTCCGGTGCAGAGCCTGCTGGGAGACCTGAGAGGGATTTaGATCCACTACAGCCACTGT +
Preference number: 3 (lower is better)
Translates to: AAGKGPPNHTTPVQSLLGDLRGI*IHYSHC
Trigger: ACAGTGGCTGTAGTGGATCAAAATCCCTCTCAGGTC...TCCCAGCAGGCTCTGCACCGGAGTCGTGTGGTTCGGAGGGCCTTTGCCAGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR TCA 72 bp GCCACACGGCTATTCTCCAGAAGCACTGTCTGGAGCTaGGCAGCTGTGACTCGGCCGGTGGCATTGAAGTCC +
Preference number: 3 (lower is better)
Translates to: ATRLFSRSTVWS*AAVTRPVALKS
Trigger: GGACTTCAATGCCACCGGCCGAGTCACAGCTGCTCAGCTCCAGACAGTGCTTCTGGAGAATAGCCGTGTGGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR GCA 72 bp ACCTTCCCTGAAGAGGGCACTGTGGTCGTCTGTGGCTaGAGGGTGATCAGATCAGGCCCCGAGCAGGTGTAT +
Preference number: 3 (lower is better)
Translates to: TFPEEGTVVVCG*RVIRSGPEQVY
Trigger: ATACACCTGCTCGGGGCCTGATCTGATCACCCTGCAGCCACAGACGACCACAGTGCCCTCTTCAGGGAAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR GCA 72 bp CTTCAGGCTTGGACCACAGGCCCATGCCGAAGGCACTaGTCTCTGCCATCTGATGCAGGTTCAGCTCTGTCC +
Preference number: 3 (lower is better)
Translates to: LQAWTTGPCRRH*SLPSDAGSALS
Trigger: GGACAGAGCTGAACCTGCATCAGATGGCAGAGAGCAGTGCCTTCGGCATGGGCCTGTGGTCCAAGCCTGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR GCA 72 bp TGGCGCTGCGGCCCTGACGTCATCTGCTCGATAATCTaGCGTAGGTGGTGCTTGAAGGTGGCGGTGTTCAGT +
Preference number: 3 (lower is better)
Translates to: WRCGPDVICSII*RRWCLKVAVFS
Trigger: ACTGAACACCGCCACCTTCAAGCACCACCTACGGCAGATTATCGAGCAGATGACGTCAGGGCCGCAGCGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR CCA 72 bp AAAATGCGGTGGCCGCCTTCTGCTTGTCTTCAGGCTTaGACCACAGGCCCATGCCGAAGGCACTGCTCTCTG +
Preference number: 3 (lower is better)
Translates to: KMRWPPSACLQA*TTGPCRRHCSL
Trigger: CAGAGAGCAGTGCCTTCGGCATGGGCCTGTGGTCCAAGCCTGAAGACAAGCAGAAGGCGGCCACCGCATTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR CCA 72 bp CACAAGGAGCCTTCCTTTTCACTGCAGCAAGGCTGCTaGCAAAGGCCCTCCGAACCACACGACTCCGGTGCA +
Preference number: 3 (lower is better)
Translates to: HKEPSFSLQQGC*QRPSEPHDSGA
Trigger: TGCACCGGAGTCGTGTGGTTCGGAGGGCCTTTGCCAGCAGCCTTGCTGCAGTGAAAAGGAAGGCTCCTTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR TCA 72 bp GTGGCCGCCCGGTCCTTGCCCTGGTGCCTAGGATTTTaGAAGCCTGGAGTGTCAACCACCATGATAGAAGCC +
Preference number: 3 (lower is better)
Translates to: VAARSLPWCLGF*KPGVSTTMIEA
Trigger: GGCTTCTATCATGGTGGTTGACACTCCAGGCTTTCAAAATCCTAGGCACCAGGGCAAGGACCGGGCGGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR GCA 72 bp CCTTCTGCTTGTCTTCAGGCTTGGACCACAGGCCCATaGCGAAGGCACTGCTCTCTGCCATCTGATGCAGGT +
Preference number: 3 (lower is better)
Translates to: PSACLQAWTTGP*RRHCSLPSDAG
Trigger: ACCTGCATCAGATGGCAGAGAGCAGTGCCTTCGGCATGGGCCTGTGGTCCAAGCCTGAAGACAAGCAGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR GCA 72 bp CTCCAGGATATGAGAGCCTGCGAGCTGAACCCTCAGTaGTGGGATGTCCAGAGCTGTGGGTTCGTTGGCTAC +
Preference number: 3 (lower is better)
Translates to: LQDMRACELNPQ*WDVQSCGFVGY
Trigger: GTAGCCAACGAACCCACAGCTCTGGACATCCCAGCACTGAGGGTTCAGCTCGCAGGCTCTCATATCCTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR CCA 72 bp GGGATGTCCAGAGCTGTGGGTTCGTTGGCTACACCTTaGTCCCCACTGGGCTGTGATGGTGATGGAGTCCTT +
Preference number: 3 (lower is better)
Translates to: GMSRAVGSLATP*SPLGCDGDGVL
Trigger: AAGGACTCCATCACCATCACAGCCCAGTGGGGACCAAGGTGTAGCCAACGAACCCACAGCTCTGGACATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR CCA 72 bp CAGGATATGAGAGCCTGCGAGCTGAACCCTCAGTGCTaGGATGTCCAGAGCTGTGGGTTCGTTGGCTACACC +
Preference number: 3 (lower is better)
Translates to: QDMRACELNPQC*DVQSCGFVGYT
Trigger: GGTGTAGCCAACGAACCCACAGCTCTGGACATCCCAGCACTGAGGGTTCAGCTCGCAGGCTCTCATATCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR-3UTR CAA 90 bp AAGGGCACGGGAATGCCTTCCTCTTTGTATCTCTCCAGAGTAGAGACAAAGGTCGTGGCCGCCCGGTCCTaGCCCTGGTGCCTAGGATTT +
Preference number: 3 (lower is better)
Translates to: KGTGMPSSLYLSRVETKVVAARS*PWCLGF
Trigger: AAATCCTAGGCACCAGGGCAAGGACCGGGCGGCCAC...GACCTTTGTCTCTACTCTGGAGAGATACAAAGAGGAAGGCATTCCCGTGCCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR GCA 72 bp TGGTCCCCACTGGGCTGTGATGGTGATGGAGTCCTTTaGCCAGCCTTGCTTTCCACTGTGGTTGGCACAAGA +
Preference number: 3 (lower is better)
Translates to: WSPLGCDGDGVL*PALLSTVVGTR
Trigger: TCTTGTGCCAACCACAGTGGAAAGCAAGGCTGGGCAAAGGACTCCATCACCATCACAGCCCAGTGGGGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR CCA 72 bp ATCCTATGTCTTGAGGGTGGCCATGTGTTCTGGCTCTaGATAGCAGGCCCCAGGAGCCTGGTCTCTCTCTCT +
Preference number: 3 (lower is better)
Translates to: ILCLEGGHVFWL*IAGPRSLVSLS
Trigger: AGAGAGAGAGACCAGGCTCCTGGGGCCTGCTATCCAGAGCCAGAACACATGGCCACCCTCAAGACATAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
3UTR CCA 72 bp AGGCTGCACGCAGACGCTCAAGTACAGTGCTGTCACTaGAGCCTTGCACCCGGACTTCTTCATCTAAGACCC +
Preference number: 3 (lower is better)
Translates to: RLHADAQVQCCH*SLAPGLLHLRP
Trigger: GGGTCTTAGATGAAGAAGTCCGGGTGCAAGGCTCCAGTGACAGCACTGTACTTGAGCGTCTGCGTGCAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR TCA 72 bp TTTCTTTCTCTCCAGTGCTTTGGAGTAGGGAGTCTCTaGCAGCAGCTGTGTCTGGGGAGGCTGCAGTGGTCC +
Preference number: 3 (lower is better)
Translates to: FLSLQCFGVGSL*QQLCLGRLQWS
Trigger: GGACCACTGCAGCCTCCCCAGACACAGCTGCTGTCAGAGACTCCCTACTCCAAAGCACTGGAGAGAAAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
3UTR TCA 72 bp GTTACCATAAGGAGGAGGGTGGCTGATCTAGGCAAGTaGCTTTACTCACTTGGCTGTGCCCCACGGCCACAG +
Preference number: 3 (lower is better)
Translates to: VTIRRRVADLGK*LYSLGCAPRPQ
Trigger: CTGTGGCCGTGGGGCACAGCCAAGTGAGTAAAGTCACTTGCCTAGATCAGCCACCCTCCTCCTTATGGTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR GCA 72 bp CGCAGACGCTCAAGTACAGTGCTGTCACTGGAGCCTTaGACCCGGACTTCTTCATCTAAGACCCAGAAGAGG +
Preference number: 3 (lower is better)
Translates to: RRRSSTVLSLEP*TRTSSSKTQKR
Trigger: CCTCTTCTGGGTCTTAGATGAAGAAGTCCGGGTGCAAGGCTCCAGTGACAGCACTGTACTTGAGCGTCTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR GCA 72 bp TCTTCTCAAAGGCTGCACGCAGACGCTCAAGTACAGTaGTGTCACTGGAGCCTTGCACCCGGACTTCTTCAT +
Preference number: 3 (lower is better)
Translates to: SSQRLHADAQVQ*CHWSLAPGLLH
Trigger: ATGAAGAAGTCCGGGTGCAAGGCTCCAGTGACAGCACTGTACTTGAGCGTCTGCGTGCAGCCTTTGAGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR CCA 72 bp AGAGGGATTTTGATCCACTACAGCCACTGTAGTTCCTaGGGAGGACTCTGGGAGGTCAAAGGGCACGGGAAT +
Preference number: 3 (lower is better)
Translates to: RGILIHYSHCSS*GGLWEVKGHGN
Trigger: ATTCCCGTGCCCTTTGACCTCCCAGAGTCCTCCCCAGGAACTACAGTGGCTGTAGTGGATCAAAATCCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR CCA 72 bp TGGAGTCCTTTGCCCAGCCTTGCTTTCCACTGTGGTTaGCACAAGACAGTGGATGAAATGCAGCCGAGACCT +
Preference number: 3 (lower is better)
Translates to: WSPLPSLAFHCG*HKTVDEMQPRP
Trigger: AGGTCTCGGCTGCATTTCATCCACTGTCTTGTGCCAACCACAGTGGAAAGCAAGGCTGGGCAAAGGACTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR TCA 72 bp TTGTCCCCTGTAGACCCAGAGATGAGAATTGGGTGCTaGGTTACCATAAGGAGGAGGGTGGCTGATCTAGGC +
Preference number: 3 (lower is better)
Translates to: LSPVDPEMRIGC*VTIRRRVADLG
Trigger: GCCTAGATCAGCCACCCTCCTCCTTATGGTAACTCAGCACCCAATTCTCATCTCTGGGTCTACAGGGGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR CCA 72 bp CCGGTCCTTGCCCTGGTGCCTAGGATTTTGAAAGCCTaGAGTGTCAACCACCATGATAGAAGCCATAGACAG +
Preference number: 3 (lower is better)
Translates to: PVLALVPRILKA*SVNHHDRSHRQ
Trigger: CTGTCTATGGCTTCTATCATGGTGGTTGACACTCCAGGCTTTCAAAATCCTAGGCACCAGGGCAAGGACCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR-3UTR CAA 90 bp TCGGAGGTCAAGTCAAGCTTCTTTAGCAGTGCAGGGTCCAGCACCTGGAACCGAGGAATGCCTTCCTCTTaGTATCTCTCCAGAGTAGAG +
Preference number: 3 (lower is better)
Translates to: SEVKSSFFSSAGSSTWNRGMPSS*YLSRVE
Trigger: CTCTACTCTGGAGAGATACAAAGAGGAAGGCATTCC...TCGGTTCCAGGTGCTGGACCCTGCACTGCTAAAGAAGCTTGACTTGACCTCCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR-3UTR CAA 90 bp CTGTGTCATCTTGACTTTGTAAGAGGGATGGGGACAGAAGTCATTTGTCCCCTGGAGGAGAAGGATCTGTaGATGAGGGAGACCACAGCC +
Preference number: 3 (lower is better)
Translates to: LCHLDFVRGMGTEVICPLEEKDL*MRETTA
Trigger: GGCTGTGGTCTCCCTCATCAACAGATCCTTCTCCTC...CAGGGGACAAATGACTTCTGTCCCCATCCCTCTTACAAAGTCAAGATGACACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR TCA 72 bp TCTGTCCTGAGATCTACATCCATCCCAGCCAGCAGCTaGGAGAAAACTTCAAAGTTTCCTTCCCCTTGCGGC +
Preference number: 3 (lower is better)
Translates to: SVLRSTSIPASS*EKTSKFPSPCG
Trigger: GCCGCAAGGGGAAGGAAACTTTGAAGTTTTCTCTCAGCTGCTGGCTGGGATGGATGTAGATCTCAGGACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR-3UTR CAA 90 bp AACTGCTCTAGGCTCTTGAATTTCCTGGGCCAGGGGACTCTAAGAATGACATTTGCATCCATCTGCAGCTaGATTTGGGCACAAGGAGCC +
Preference number: 3 (lower is better)
Translates to: NCSRLLNFLGQGTLRMTFASICS*IWAQGA
Trigger: GGCTCCTTGTGCCCAAATCAAGCTGCAGATGGATGC...AAATGTCATTCTTAGAGTCCCCTGGCCCAGGAAATTCAAGAGCCTAGAGCAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR TCA 72 bp TTTATTGAATACAGACCAAGCATATGCATAGCCTGGTaGTCTGCTAGGACATGTCTCTCTGGGCCCATCCTA +
Preference number: 3 (lower is better)
Translates to: FIEYRPSICIAW*SARTCLSGPIL
Trigger: TAGGATGGGCCCAGAGAGACATGTCCTAGCAGATCACCAGGCTATGCATATGCTTGGTCTGTATTCAATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
3UTR TCA 72 bp GACATTTCTGGTGTCACATGGGACACTGTGTCATCTTaGCTTTGTAAGAGGGATGGGGACAGAAGTCATTTG +
Preference number: 3 (lower is better)
Translates to: DISGVTWDTVSS*LCKRDGDRSHL
Trigger: CAAATGACTTCTGTCCCCATCCCTCTTACAAAGTCAAGATGACACAGTGTCCCATGTGACACCAGAAATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR GCA 72 bp CTGACTGGGCTCTTCCGTCTAAGAACATCTTCAGGATaGATACAGTTCTTTCTGGAGCTCAGGTTATTTAAG +
Preference number: 3 (lower is better)
Translates to: LTGLFRLRTSSG*IQFFLELRLFK
Trigger: CTTAAATAACCTGAGCTCCAGAAAGAACTGTATGCATCCTGAAGATGTTCTTAGACGGAAGAGCCCAGTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR CAA 72 bp TCCACACCTGTCATCTTCAGCCCTGAGCAGGCCTCATaGTCCTGTAGGCCCTGGCGCTGCGGCCCTGACGTC +
Preference number: 4 (lower is better)
Translates to: STPVIFSPEQAS*SCRPWRCGPDV
Trigger: GACGTCAGGGCCGCAGCGCCAGGGCCTACAGGACAATGAGGCCTGCTCAGGGCTGAAGATGACAGGTGTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
CDS-3UTR CCA 90 bp GCAGGCCCCAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGCCATGCAGCGCCGGCTaGCTTCCTCCTCCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: AGPRSLVSLSLSLFLSLQPCSAG*LPPPAG
Trigger: CCCAGCGGGAGGAGGAAGCCAGCCGGCGCTGCATGG...CTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTGGGGCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR TCA 90 bp GCAGGCCCCAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGACCTCTCGGAGGGCCTaGAGCCGCTCTGCCCGCTCA +
Preference number: 4 (lower is better)
Translates to: AGPRSLVSLSLSLFLSLQTSRRA*SRSARS
Trigger: TGAGCGGGCAGAGCGGCTTCAGGCCCTCCGAGAGGT...CTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTGGGGCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp GCAGGCCCCAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGACTGGAGCCTCCTGCTaGTGCCCCGTGGGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: AGPRSLVSLSLSLFLSLQTGASC*CPVGPA
Trigger: AGCAGGGCCCACGGGGCAGCAGCAGGAGGCTCCAGT...CTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTGGGGCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR TCA 90 bp AGCAGGCCCCAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTCTCTGGACGGGGGTaGCACAGCCGTGCGCTGGGA +
Preference number: 4 (lower is better)
Translates to: SRPQEPGLSLSLSLSFSPVSGRG*HSRALG
Trigger: TCCCAGCGCACGGCTGTGTCACCCCCGTCCAGAGAC...TGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTGGGGCCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp TGGATAGCAGGCCCCAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTGGCTCCCCGGCTCCCTaGACCCTGCTCTCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: WIAGPRSLVSLSLSLFLSGSPAP*TLLSGW
Trigger: CCAGCCAGAGAGCAGGGTGCAGGGAGCCGGGGAGCC...AGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTGGGGCCTGCTATCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp CATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGGCCATGTGTTCTGGCTCTCAAAGCGGGTGGCCCTaGGGCTGTGGCCGGTGGACA +
Preference number: 4 (lower is better)
Translates to: HVSLGPSYVLRVAMCSGSQSGWP*GCGRWT
Trigger: TGTCCACCGGCCACAGCCGCAGGGCCACCCGCTTTG...AGAGCCAGAACACATGGCCACCCTCAAGACATAGGATGGGCCCAGAGAGACATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp CATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGGCCATGTGTTCTGGCTCTCTGATGGCTGCCCCGTaGGCCCTGATGGCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: HVSLGPSYVLRVAMCSGSLMAAP*ALMAAL
Trigger: CAGGGCAGCCATCAGGGCCCACGGGGCAGCCATCAG...AGAGCCAGAACACATGGCCACCCTCAAGACATAGGATGGGCCCAGAGAGACATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp GCAGGCCCCAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCGGCTGTGGCCGGTaGACACACAGCCAAAGGCCC +
Preference number: 4 (lower is better)
Translates to: AGPRSLVSLSLSLFLSLQCGCGR*THSQRP
Trigger: GGGCCTTTGGCTGTGTGTCCACCGGCCACAGCCGCA...CTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTGGGGCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp GGTGATCTGCTAGGACATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGGCCCACCCAGGTGGTAGATaGCCGCCAGCACCCGCCAGA +
Preference number: 4 (lower is better)
Translates to: GDLLGHVSLGPSYVLRVAHPGGR*PPAPAR
Trigger: TCTGGCGGGTGCTGGCGGCCATCTACCACCTGGGTG...GGCCACCCTCAAGACATAGGATGGGCCCAGAGAGACATGTCCTAGCAGATCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp CGACCACGGGGTACCTTCCCTGAAGAGGGCACTGTGGTCGTCTGTGGCTGCAGGACAAAGGATCTCCTCTaGATTCCTTGGCCCCGGGTG +
Preference number: 4 (lower is better)
Translates to: RPRGTFPEEGTVVVCGCRTKDLL*IPWPRV
Trigger: CACCCGGGGCCAAGGAATCCAGAGGAGATCCTTTGT...CCTGCAGCCACAGACGACCACAGTGCCCTCTTCAGGGAAGGTACCCCGTGGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
CDS-3UTR TCA 90 bp GGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGCTGCCCCGTGGGCCCTaGTGGCTGCCCTGTGGGTTC +
Preference number: 4 (lower is better)
Translates to: GAWSLSLSLSFFLSSALELPRGP*WLPCGF
Trigger: GAACCCACAGGGCAGCCATCAGGGCCCACGGGGCAG...CTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR TCA 90 bp CTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGGAGTCTCTGTCCCGTGGGCCCTaGTGGCTGCCCCGTGGGCCC +
Preference number: 4 (lower is better)
Translates to: LSLSLSLSFSPVLWSRESLSRGP*WLPRGP
Trigger: GGGCCCACGGGGCAGCCATCAGGGCCCACGGGACAG...AGACTCCCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp CCTGGTGATCTGCTAGGACATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGTTCACTGGAGCCTCCTaGTGCTGCCCCGTGGGCCCT +
Preference number: 4 (lower is better)
Translates to: PGDLLGHVSLGPSYVLRVFTGAS*CCPVGP
Trigger: AGGGCCCACGGGGCAGCAGCAGGAGGCTCCAGTGAA...CACCCTCAAGACATAGGATGGGCCCAGAGAGACATGTCCTAGCAGATCACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp GCAGGCCCCAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTCTCCACTGACACCCTaGCGTCCACGCTGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: AGPRSLVSLSLSLFLSLQSPLTP*RPRCLP
Trigger: TGGCAGGCAGCGTGGACGGCAGGGTGTCAGTGGAGA...CTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTGGGGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp GCAGGCCCCAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGCCTGAGCTTGGGACCTaGTCCCCTGCTCCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: AGPRSLVSLSLSLFLSLQPELGT*SPAPLC
Trigger: GCACAGAGGAGCAGGGGACCAGGTCCCAAGCTCAGG...CTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTGGGGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp GCAGGCCCCAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGGAGGGGTTGGCCGGGTaGACCTGCTCCTCATCCACT +
Preference number: 4 (lower is better)
Translates to: AGPRSLVSLSLSLFLSLQEGLAG*TCSSST
Trigger: AGTGGATGAGGAGCAGGTCCACCCGGCCAACCCCTC...CTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTGGGGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp CAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGCCATGGCAAAGCGGGTaGCCCTGCGGCTGTGGCCGG +
Preference number: 4 (lower is better)
Translates to: QEPGLSLSLSLSFSPVLWPWQSG*PCGCGR
Trigger: CCGGCCACAGCCGCAGGGCCACCCGCTTTGCCATGG...CCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp AGCAGGCCCCAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCACCAGCACCCGCCAGATaGCTTGCTGCTCGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: SRPQEPGLSLSLSLSFSPPAPAR*LAARPL
Trigger: CAGAGGGCGAGCAGCAAGCCATCTGGCGGGTGCTGG...TGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTGGGGCCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp AGCAGGCCCCAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCATTGTCCTGTAGGCCCTaGCGCTGCGGCCCTGACGTC +
Preference number: 4 (lower is better)
Translates to: SRPQEPGLSLSLSLSFSPLSCRP*RCGPDV
Trigger: GACGTCAGGGCCGCAGCGCCAGGGCCTACAGGACAA...TGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTGGGGCCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp CATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGGCCATGTGTTCTGGCTCTAGCTTGGCCCGGGCCTaGAAGAGGCTCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: HVSLGPSYVLRVAMCSGSSLARA*KRLCSS
Trigger: GGAGCTGCAGAGCCTCTTCCAGGCCCGGGCCAAGCT...AGAGCCAGAACACATGGCCACCCTCAAGACATAGGATGGGCCCAGAGAGACATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp CATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGGCCATGTGTTCTGGCTCTGCTTCCTCCTCCCGCTaGGCCAGCTCCTGCATCTCC +
Preference number: 4 (lower is better)
Translates to: HVSLGPSYVLRVAMCSGSASSSR*ASSCIS
Trigger: GGAGATGCAGGAGCTGGCCCAGCGGGAGGAGGAAGC...AGAGCCAGAACACATGGCCACCCTCAAGACATAGGATGGGCCCAGAGAGACATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp GCAGGCCCCAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGCCTTCGAGGCATCTCTaGCAGCATCCCAGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: AGPRSLVSLSLSLFLSLQPSRHL*QHPRLR
Trigger: GCGGAGCCTGGGATGCTGCCAGAGATGCCTCGAAGG...CTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTGGGGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
3UTR CAA 72 bp GAAAATGCGGTGGCCGCCTTCTGCTTGTCTTCAGGCTaGGACCACAGGCCCATGCCGAAGGCACTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: ENAVAAFCLSSG*DHRPMPKALLS
Trigger: AGAGAGCAGTGCCTTCGGCATGGGCCTGTGGTCCAAGCCTGAAGACAAGCAGAAGGCGGCCACCGCATTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
CDS-3UTR GCA 90 bp CCTGGTGATCTGCTAGGACATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGTGGGGCTGTGAATGCTaGCGCCTTCCTCCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: PGDLLGHVSLGPSYVLRVWGCEC*RLPPPG
Trigger: GCCAGGAGGAGGAAGGCGGCAGCATTCACAGCCCCA...CACCCTCAAGACATAGGATGGGCCCAGAGAGACATGTCCTAGCAGATCACCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp AGCAGGCCCCAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAAAGTTTCCTTCCCCTTaGGGCTGCCGGGCCACACGG +
Preference number: 4 (lower is better)
Translates to: SRPQEPGLSLSLSLSFSPKFPSP*GCRATR
Trigger: CCGTGTGGCCCGGCAGCCGCAAGGGGAAGGAAACTT...TGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTGGGGCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp GGTGATCTGCTAGGACATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGGCCGCTCGCCCTCTGAGATaGCCAGTAGCTCCATGGCAC +
Preference number: 4 (lower is better)
Translates to: GDLLGHVSLGPSYVLRVAARPLR*PVAPWH
Trigger: GTGCCATGGAGCTACTGGGCATCTCAGAGGGCGAGC...GGCCACCCTCAAGACATAGGATGGGCCCAGAGAGACATGTCCTAGCAGATCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp GCAGGCCCCAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGCTCGTCTGCTCCCCCTaGTGGCTTCTCCTCCAGGTT +
Preference number: 4 (lower is better)
Translates to: AGPRSLVSLSLSLFLSLQLVCSP*WLLLQV
Trigger: AACCTGGAGGAGAAGCCAGCAGGGGGAGCAGACGAG...CTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTGGGGCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp CATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGGCCATGTGTTCTGGCTCTAGCTCCCCAAGCTTCTaGTCCAGCTCTGTCCGGGCC +
Preference number: 4 (lower is better)
Translates to: HVSLGPSYVLRVAMCSGSSSPSF*SSSVRA
Trigger: GGCCCGGACAGAGCTGGAGCAGAAGCTTGGGGAGCT...AGAGCCAGAACACATGGCCACCCTCAAGACATAGGATGGGCCCAGAGAGACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp TGGATAGCAGGCCCCAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTGATAGCTGTCCCGTaGGCCCTGATGGCTGCCCCG +
Preference number: 4 (lower is better)
Translates to: WIAGPRSLVSLSLSLFLSLIAVP*ALMAAP
Trigger: CGGGGCAGCCATCAGGGCCCACGGGACAGCTATCAG...AGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTGGGGCCTGCTATCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp CATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGGCCATGTGTTCTGGCTCTACCCTGCTCTCTGGCTaGCCGTCCCTCTTTGCAGCC +
Preference number: 4 (lower is better)
Translates to: HVSLGPSYVLRVAMCSGSTLLSG*PSLFAA
Trigger: GGCTGCAAAGAGGGACGGCCAGCCAGAGAGCAGGGT...AGAGCCAGAACACATGGCCACCCTCAAGACATAGGATGGGCCCAGAGAGACATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp AGCAGGCCCCAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCACTGCACCCTGCTCTCTaGCTGGCCGTCCCTCTTTGC +
Preference number: 4 (lower is better)
Translates to: SRPQEPGLSLSLSLSFSPLHPAL*LAVPLC
Trigger: GCAAAGAGGGACGGCCAGCCAGAGAGCAGGGTGCAG...TGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTGGGGCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp CATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGGCCATGTGTTCTGGCTCTTCCGAGTCTCCACTCTaGCCCCCTCTATCCGGGTCC +
Preference number: 4 (lower is better)
Translates to: HVSLGPSYVLRVAMCSGSSESPL*PPLSGS
Trigger: GGACCCGGATAGAGGGGGCCAGAGTGGAGACTCGGA...AGAGCCAGAACACATGGCCACCCTCAAGACATAGGATGGGCCCAGAGAGACATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp AGCAGGCCCCAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAAGAGCTCCTCGAAAGTaGCCGCCCGGTCCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: SRPQEPGLSLSLSLSFSPRAPRK*PPGPCP
Trigger: AGGGCAAGGACCGGGCGGCCACTTTCGAGGAGCTCT...TGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTGGGGCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp CCTGGTGATCTGCTAGGACATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGCTGCGAGGTTGGGCTTaGCCCTTCGAAGCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: PGDLLGHVSLGPSYVLRVLRGWA*PFEASL
Trigger: CAGGCTGGCTTCGAAGGGCCAAGCCCAACCTCGCAG...CACCCTCAAGACATAGGATGGGCCCAGAGAGACATGTCCTAGCAGATCACCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp TGGATAGCAGGCCCCAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCGGTGCAGAGCCTGCTaGGAGGTACCCTCAAGCCCG +
Preference number: 4 (lower is better)
Translates to: WIAGPRSLVSLSLSLFLSRCRAC*EVPSSP
Trigger: CGGGCTTGAGGGTACCTCCCAGCAGGCTCTGCACCG...AGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTGGGGCCTGCTATCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp GGTGATCTGCTAGGACATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGGCCTGTGGGAAGACTGGGTaGAGAGAGGCAGAACCGGCC +
Preference number: 4 (lower is better)
Translates to: GDLLGHVSLGPSYVLRVACGKTG*REAEPA
Trigger: GGCCGGTTCTGCCTCTCTCCACCCAGTCTTCCCACA...GGCCACCCTCAAGACATAGGATGGGCCCAGAGAGACATGTCCTAGCAGATCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp AGCAGGCCCCAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGAAGCCCGGGTGGTCTaGAAGATGGGGAGCACAGGG +
Preference number: 4 (lower is better)
Translates to: SRPQEPGLSLSLSLSFSPEARVV*KMGSTG
Trigger: CCCTGTGCTCCCCATCTTCCAGACCACCCGGGCTTC...TGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTGGGGCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp GGTGATCTGCTAGGACATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGGCCGTGACAGGAGTCCCGTaGGGGAGCTCAGCTTTCTCC +
Preference number: 4 (lower is better)
Translates to: GDLLGHVSLGPSYVLRVAVTGVP*GSSAFS
Trigger: GGAGAAAGCTGAGCTCCCCCACGGGACTCCTGTCAC...GGCCACCCTCAAGACATAGGATGGGCCCAGAGAGACATGTCCTAGCAGATCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR TCA 90 bp TGGATAGCAGGCCCCAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTAGCACTGTCTGGAGCTaGGCAGCTGTGACTCGGCCG +
Preference number: 4 (lower is better)
Translates to: WIAGPRSLVSLSLSLFLSSTVWS*AAVTRP
Trigger: CGGCCGAGTCACAGCTGCTCAGCTCCAGACAGTGCT...AGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTGGGGCCTGCTATCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp TCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGGAGTCTCTGGTGGGCCCTGATGGCTaGCCCGTGGGCCCTGATGGC +
Preference number: 4 (lower is better)
Translates to: SLSLSLSFSPVLWSRESLVGPDG*PVGPDG
Trigger: GCCATCAGGGCCCACGGGGCAGCCATCAGGGCCCAC...CAGAGACTCCCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp CCTGGTGATCTGCTAGGACATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGAAGCAGTGCCCAGTATaGACGCTGGGCCAGGGACGT +
Preference number: 4 (lower is better)
Translates to: PGDLLGHVSLGPSYVLRVKQCPV*TLGQGR
Trigger: ACGTCCCTGGCCCAGCGTGCATACTGGGCACTGCTT...CACCCTCAAGACATAGGATGGGCCCAGAGAGACATGTCCTAGCAGATCACCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp CATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGGCCATGTGTTCTGGCTCTCCGGAGCTGGGAAAATaGGGTGGCCGCCTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: HVSLGPSYVLRVAMCSGSPELGK*GGRLLL
Trigger: AAGCAGAAGGCGGCCACCGCATTTTCCCAGCTCCGG...AGAGCCAGAACACATGGCCACCCTCAAGACATAGGATGGGCCCAGAGAGACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp CCTGGTGATCTGCTAGGACATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGACCCGCCAGATGGCTTaGTGCTCGCCCTCTGAGATG +
Preference number: 4 (lower is better)
Translates to: PGDLLGHVSLGPSYVLRVTRQMA*CSPSEM
Trigger: CATCTCAGAGGGCGAGCAGCAAGCCATCTGGCGGGT...CACCCTCAAGACATAGGATGGGCCCAGAGAGACATGTCCTAGCAGATCACCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp GCAGGCCCCAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGGCCTGGAAGAGGCTCTaGAGCTCCTCCCTCTTTGAC +
Preference number: 4 (lower is better)
Translates to: AGPRSLVSLSLSLFLSLQAWKRL*SSSLFD
Trigger: GTCAAAGAGGGAGGAGCTGCAGAGCCTCTTCCAGGC...CTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTGGGGCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp CCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGGGCCTGAAGCCGCTCTaGCCGCTCACTCTCCAGCGC +
Preference number: 4 (lower is better)
Translates to: PGLSLSLSLSFSPVLWSRGLKPL*PLTLQR
Trigger: GCGCTGGAGAGTGAGCGGGCAGAGCGGCTTCAGGCC...CCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp CCTGGTGATCTGCTAGGACATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGTGGCGGGTGTTCCTGTaGGACCTGACTCCTGAGGTC +
Preference number: 4 (lower is better)
Translates to: PGDLLGHVSLGPSYVLRVWRVFL*DLTPEV
Trigger: GACCTCAGGAGTCAGGTCCCACAGGAACACCCGCCA...CACCCTCAAGACATAGGATGGGCCCAGAGAGACATGTCCTAGCAGATCACCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp GCAGGCCCCAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGAGGGCCACAATGCTCTaGTCTCTCCGCTGGCTAAGC +
Preference number: 4 (lower is better)
Translates to: AGPRSLVSLSLSLFLSLQRATML*SLRWLS
Trigger: GCTTAGCCAGCGGAGAGACCAGAGCATTGTGGCCCT...CTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTGGGGCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp AGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTGGCCCTGCGGCTGTaGCCGGTGGACACACAGCCA +
Preference number: 4 (lower is better)
Translates to: RSLVSLSLSLFLSLQCFGVALRL*PVDTQP
Trigger: TGGCTGTGTGTCCACCGGCCACAGCCGCAGGGCCAC...TCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp GGTGATCTGCTAGGACATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGGCCAGCCACTGTAGTTCCTaGGGAGGACTCTGGGAGGTC +
Preference number: 4 (lower is better)
Translates to: GDLLGHVSLGPSYVLRVASHCSS*GGLWEV
Trigger: GACCTCCCAGAGTCCTCCCCAGGAACTACAGTGGCT...GGCCACCCTCAAGACATAGGATGGGCCCAGAGAGACATGTCCTAGCAGATCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp CAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGACACAGGAGGCAGCTTaGCCCGGGCCTGGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: QEPGLSLSLSLSFSPVLWTQEAA*PGPGRG
Trigger: GCCTCTTCCAGGCCCGGGCCAAGCTGCCTCCTGTGT...CCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp CATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGGCCATGTGTTCTGGCTCTCTGCAGCAAGGCTGCTaGCAAAGGCCCTCCGAACCA +
Preference number: 4 (lower is better)
Translates to: HVSLGPSYVLRVAMCSGSLQQGC*QRPSEP
Trigger: TGGTTCGGAGGGCCTTTGCCAGCAGCCTTGCTGCAG...AGAGCCAGAACACATGGCCACCCTCAAGACATAGGATGGGCCCAGAGAGACATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp GGTGATCTGCTAGGACATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGGCCCAGGAGCCCCCACCATaGCCAGTCTTTGACCTTCAG +
Preference number: 4 (lower is better)
Translates to: GDLLGHVSLGPSYVLRVAQEPPP*PVFDLQ
Trigger: CTGAAGGTCAAAGACTGGCCATGGTGGGGGCTCCTG...GGCCACCCTCAAGACATAGGATGGGCCCAGAGAGACATGTCCTAGCAGATCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp GGTGATCTGCTAGGACATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGGCCCCCTCTCTTTCAGGCTaGCCACACCTTGATCCCCCA +
Preference number: 4 (lower is better)
Translates to: GDLLGHVSLGPSYVLRVAPSLSG*PHLDPP
Trigger: TGGGGGATCAAGGTGTGGCCAGCCTGAAAGAGAGGG...GGCCACCCTCAAGACATAGGATGGGCCCAGAGAGACATGTCCTAGCAGATCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp AGCAGGCCCCAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGAACCCTGGCCTCTCTaGGCTCTCTTCCTGCGTAGC +
Preference number: 4 (lower is better)
Translates to: SRPQEPGLSLSLSLSFSPEPWPL*ALFLRS
Trigger: GCTACGCAGGAAGAGAGCCCAGAGAGGCCAGGGTTC...TGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTGGGGCCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR TCA 90 bp CATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGGCCATGTGTTCTGGCTCTCCCACTCAAACCGCATaGACTGCTTCCGGCCCACTT +
Preference number: 4 (lower is better)
Translates to: HVSLGPSYVLRVAMCSGSPTQTA*TASGPL
Trigger: AAGTGGGCCGGAAGCAGTTCATGCGGTTTGAGTGGG...AGAGCCAGAACACATGGCCACCCTCAAGACATAGGATGGGCCCAGAGAGACATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR TCA 90 bp TGGATAGCAGGCCCCAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCGCTTCTGGCAGGACTaGCGCACATCCTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: WIAGPRSLVSLSLSLFLSRFWQD*RTSSSS
Trigger: AGAGCTGGAGGATGTGCGTCAGTCCTGCCAGAAGCG...AGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTGGGGCCTGCTATCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR TCA 90 bp CAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGGAGCGTGTGTCCTCCTaGGGTCTCTGCGGAGACGCT +
Preference number: 4 (lower is better)
Translates to: QEPGLSLSLSLSFSPVLWERVSS*GLCGDA
Trigger: AGCGTCTCCGCAGAGACCTCAGGAGGACACACGCTC...CCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR TCA 90 bp GCAGGCCCCAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGGTGGCCAGAAGGAGCTaGACATCAGACAACAGAGCG +
Preference number: 4 (lower is better)
Translates to: AGPRSLVSLSLSLFLSLQVARRS*TSDNRA
Trigger: CGCTCTGTTGTCTGATGTTCAGCTCCTTCTGGCCAC...CTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTGGGGCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp CCTGGTGATCTGCTAGGACATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGTTCTGGGGCTGTGAATaGTGCCGCCTTCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: PGDLLGHVSLGPSYVLRVFWGCE*CRLPPP
Trigger: AGGAGGAGGAAGGCGGCAGCATTCACAGCCCCAGAA...CACCCTCAAGACATAGGATGGGCCCAGAGAGACATGTCCTAGCAGATCACCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp GCAGGCCCCAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTCTGACTTCAGCCCCTaGAACCTTGGGCTCATCCTC +
Preference number: 4 (lower is better)
Translates to: AGPRSLVSLSLSLFLSLQSDFSP*NLGLIL
Trigger: GAGGATGAGCCCAAGGTTGCAGGGGCTGAAGTCAGA...CTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTGGGGCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp GGTGATCTGCTAGGACATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGGCCCACTTTGCACGCTCCTaGTGCACCCAGGTGGTAGAT +
Preference number: 4 (lower is better)
Translates to: GDLLGHVSLGPSYVLRVAHFARS*CTQVVD
Trigger: ATCTACCACCTGGGTGCAGCAGGAGCGTGCAAAGTG...GGCCACCCTCAAGACATAGGATGGGCCCAGAGAGACATGTCCTAGCAGATCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp CATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGGCCATGTGTTCTGGCTCTCGCTCCACGGTGGACTaGTCCAGGTACTGGATTCGA +
Preference number: 4 (lower is better)
Translates to: HVSLGPSYVLRVAMCSGSRSTVD*SRYWIR
Trigger: TCGAATCCAGTACCTGGAGCAGTCCACCGTGGAGCG...AGAGCCAGAACACATGGCCACCCTCAAGACATAGGATGGGCCCAGAGAGACATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp CATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGGCCATGTGTTCTGGCTCTCAGCTCATCCAGGATTaGAGACTGCCCTCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: HVSLGPSYVLRVAMCSGSQLIQD*RLPSGW
Trigger: CCAGCCAGAGGGCAGTCTGCAATCCTGGATGAGCTG...AGAGCCAGAACACATGGCCACCCTCAAGACATAGGATGGGCCCAGAGAGACATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp TGGATAGCAGGCCCCAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTTGCCCAGTAGCTCCATaGCACCCCGGAGCTGGGAAA +
Preference number: 4 (lower is better)
Translates to: WIAGPRSLVSLSLSLFLSCPVAP*HPGAGK
Trigger: TTTCCCAGCTCCGGGGTGCCATGGAGCTACTGGGCA...AGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTGGGGCCTGCTATCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp AGCAGGCCCCAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAAGACTGCCCTCTGGCTaGGAGCTGATGACAGAGACG +
Preference number: 4 (lower is better)
Translates to: SRPQEPGLSLSLSLSFSPRLPSG*ELMTET
Trigger: CGTCTCTGTCATCAGCTCCCAGCCAGAGGGCAGTCT...TGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTGGGGCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp GGTGATCTGCTAGGACATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGGCCCCTCCTTCCCATCTTTaGCAGCTCCGGATGAAGGAG +
Preference number: 4 (lower is better)
Translates to: GDLLGHVSLGPSYVLRVAPPSHL*QLRMKE
Trigger: CTCCTTCATCCGGAGCTGCCAAAGATGGGAAGGAGG...GGCCACCCTCAAGACATAGGATGGGCCCAGAGAGACATGTCCTAGCAGATCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp ACAGAGCTCCTCGAAAGTGGCCGCCCGGTCCTTGCCCTGGTGCCTAGGATTTTGCCAGCTCAGAGGGGTTaGCCTAAAGAACTCACAAAG +
Preference number: 4 (lower is better)
Translates to: TELLESGRPVLALVPRILPAQRG*PKELTK
Trigger: CTTTGTGAGTTCTTTAGGCCAACCCCTCTGAGCTGG...CAAAATCCTAGGCACCAGGGCAAGGACCGGGCGGCCACTTTCGAGGAGCTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR CAA 72 bp AGTGGCCGCCCGGTCCTTGCCCTGGTGCCTAGGATTTaGAAAGCCTGGAGTGTCAACCACCATGATAGAAGC +
Preference number: 4 (lower is better)
Translates to: SGRPVLALVPRI*KAWSVNHHDRS
Trigger: GCTTCTATCATGGTGGTTGACACTCCAGGCTTTCAAAATCCTAGGCACCAGGGCAAGGACCGGGCGGCCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
CDS-3UTR TCA 90 bp GCAGGCCCCAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGACTCTGTCCTTGCTCTaGGGACTGTCCCACTTGCTT +
Preference number: 4 (lower is better)
Translates to: AGPRSLVSLSLSLFLSLQTLSLL*GLSHLL
Trigger: AAGCAAGTGGGACAGTCCTCAGAGCAAGGACAGAGT...CTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTGGGGCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR TCA 90 bp TCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGGAGTCTCTGCCGGAGCTTCTCCACTaGCACCCTGCCGTCCACGCT +
Preference number: 4 (lower is better)
Translates to: SLSLSLSFSPVLWSRESLPELLH*HPAVHA
Trigger: AGCGTGGACGGCAGGGTGTCAGTGGAGAAGCTCCGG...CAGAGACTCCCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR TCA 90 bp AGCAGGCCCCAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCACAGCTCCTCCCTCTTTaGCTGCTGCAGGATTTGAGG +
Preference number: 4 (lower is better)
Translates to: SRPQEPGLSLSLSLSFSPQLLPL*LLQDLR
Trigger: CCTCAAATCCTGCAGCAGTCAAAGAGGGAGGAGCTG...TGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTGGGGCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR TCA 90 bp CCTGGTGATCTGCTAGGACATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGTCCCAAGTGAGGTGGTaGCACTTCCTCTTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: PGDLLGHVSLGPSYVLRVSQVRW*HFLFSW
Trigger: CCAGCTGAAGAGGAAGTGTCACCACCTCACTTGGGA...CACCCTCAAGACATAGGATGGGCCCAGAGAGACATGTCCTAGCAGATCACCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR TCA 90 bp TGGATAGCAGGCCCCAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCCTCCAGGTCCCAAGTaGGGTGGTGACACTTCCTCT +
Preference number: 4 (lower is better)
Translates to: WIAGPRSLVSLSLSLFLSPPGPK*GGDTSS
Trigger: AGAGGAAGTGTCACCACCTCACTTGGGACCTGGAGG...AGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTGGGGCCTGCTATCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR TCA 90 bp CTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGGAGTCTAGCTGCTGCTGGAGCTaGCCCAGCTCCCAGCGGACT +
Preference number: 4 (lower is better)
Translates to: LSLSLSLSFSPVLWSRESSCCWS*PSSQRT
Trigger: AGTCCGCTGGGAGCTGGGTCAGCTCCAGCAGCAGCT...AGACTCCCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR TCA 90 bp CCTGGTGATCTGCTAGGACATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGGCTGCTCCAGCTGCTTaGTGGTATTTTCCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: PGDLLGHVSLGPSYVLRVAAPAA*WYFPAG
Trigger: GCCAGCAGGAAAATACCATCAAGCAGCTGGAGCAGC...CACCCTCAAGACATAGGATGGGCCCAGAGAGACATGTCCTAGCAGATCACCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR TCA 90 bp CATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGGCCATGTGTTCTGGCTCTTGCCGCCTGTACTTTTaGAGGACACGATGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: HVSLGPSYVLRVAMCSGSCRLYF*RTRWSW
Trigger: CCAGCTCCATCGTGTCCTTCAAAAGTACAGGCGGCA...AGAGCCAGAACACATGGCCACCCTCAAGACATAGGATGGGCCCAGAGAGACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp CCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGCCACTTCTTCCTCTGTaGACACACGGGGCTCCCCGG +
Preference number: 4 (lower is better)
Translates to: PGLSLSLSLSFSPVLWSRPLLPL*THGAPR
Trigger: CCGGGGAGCCCCGTGTGTGCACAGAGGAAGAAGTGG...CCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp CTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGGAGTCTGGCCCAGGGCCACAATaGTCTGGTCTCTCCGCTGGC +
Preference number: 4 (lower is better)
Translates to: LSLSLSLSFSPVLWSRESGPGPQ*SGLSAG
Trigger: GCCAGCGGAGAGACCAGAGCATTGTGGCCCTGGGCC...AGACTCCCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp GCAGGCCCCAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGGCGCTTCAGGAGGTCTaGTCTCTCAAACTGCAACCT +
Preference number: 4 (lower is better)
Translates to: AGPRSLVSLSLSLFLSLQALQEV*SLKLQP
Trigger: AGGTTGCAGTTTGAGAGAGCAGACCTCCTGAAGCGC...CTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTGGGGCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp AGCAGGCCCCAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCACCTGGTCCTCATCAATaGGCTTCAGGAGGTCTGCTC +
Preference number: 4 (lower is better)
Translates to: SRPQEPGLSLSLSLSFSPPGPHQ*ASGGLL
Trigger: GAGCAGACCTCCTGAAGCGCATTGATGAGGACCAGG...TGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTGGGGCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp CCTGGTGATCTGCTAGGACATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGGTGGATGAGCTGTCCTaGGAAGTCTGCTGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: PGDLLGHVSLGPSYVLRVVDELS*EVCWLP
Trigger: TGGAAGCCAGCAGACTTCCCAGGACAGCTCATCCAC...CACCCTCAAGACATAGGATGGGCCCAGAGAGACATGTCCTAGCAGATCACCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp CATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGGCCATGTGTTCTGGCTCTCGCTGTTCTGAGTGGTaGATGAGCTGTCCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: HVSLGPSYVLRVAMCSGSRCSEW*MSCPGK
Trigger: CTTCCCAGGACAGCTCATCCACCACTCAGAACAGCG...AGAGCCAGAACACATGGCCACCCTCAAGACATAGGATGGGCCCAGAGAGACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp GCAGGCCCCAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGACTCTGGATCCAGCTTaGCCACCATCAGCAGCACAT +
Preference number: 4 (lower is better)
Translates to: AGPRSLVSLSLSLFLSLQTLDPA*PPSAAH
Trigger: ATGTGCTGCTGATGGTGGCCAAGCTGGATCCAGAGT...CTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTGGGGCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp GGTGATCTGCTAGGACATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGGCCTCCAGAATCTTTGGCTaGAGCTGGGGTCTTGTCCAC +
Preference number: 4 (lower is better)
Translates to: GDLLGHVSLGPSYVLRVASRIFG*SWGLVH
Trigger: GTGGACAAGACCCCAGCTCCAGCCAAAGATTCTGGA...GGCCACCCTCAAGACATAGGATGGGCCCAGAGAGACATGTCCTAGCAGATCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp GCAGGCCCCAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGCCACCCTTTGTGCTTTaGCCTGTATCTCCAACTCCC +
Preference number: 4 (lower is better)
Translates to: AGPRSLVSLSLSLFLSLQPPFVL*PVSPTP
Trigger: GGGAGTTGGAGATACAGGCCAAAGCACAAAGGGTGG...CTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTGGGGCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp CAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGCTGATGGCTGCCCTGTaGGTTCTGCTAGCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: QEPGLSLSLSLSFSPVLWLMAAL*VLLAAH
Trigger: GTGGGCAGCTAGCAGAACCCACAGGGCAGCCATCAG...CCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp CATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGGCCATGTGTTCTGGCTCTGCTGGGAAAATGCGGTaGCCGCCTTCTGCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: HVSLGPSYVLRVAMCSGSAGKMR*PPSACL
Trigger: AAGACAAGCAGAAGGCGGCCACCGCATTTTCCCAGC...AGAGCCAGAACACATGGCCACCCTCAAGACATAGGATGGGCCCAGAGAGACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp AGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGATCCAGGTTGGCCCCCTaGATCCTCTGCTGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: RSLVSLSLSLFLSLQCFGSRLAP*ILCCAS
Trigger: GGAGGCACAGCAGAGGATCCAGGGGGCCAACCTGGA...TCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp GGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGGCTTCTCCTCCAGGTTaGCCCCCTGGATCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: GAWSLSLSLSFFLSSALEASPPG*PPGSSA
Trigger: AGCAGAGGATCCAGGGGGCCAACCTGGAGGAGAAGC...CTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp GGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTCGCTCTGCTCCAGCTaGCTGTGCACCTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GAWSLSLSLSFFLSSALESLCSS*LCTFSS
Trigger: GCTGGAGAAGGTGCACAGCCAGCTGGAGCAGAGCGA...CTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp GGTGATCTGCTAGGACATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGGCCCTTTTGTGGGAAGACTaGGTGGAGAGAGGCAGAACC +
Preference number: 4 (lower is better)
Translates to: GDLLGHVSLGPSYVLRVALLWED*VERGRT
Trigger: GGTTCTGCCTCTCTCCACCCAGTCTTCCCACAAAAG...GGCCACCCTCAAGACATAGGATGGGCCCAGAGAGACATGTCCTAGCAGATCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
3UTR CAA 72 bp CAGCAGCTGAGAGAAAACTTCAAAGTTTCCTTCCCCTaGCGGCTGCCGGGCCACACGGCTATTCTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: QQLRENFKVSFP*RLPGHTAILQK
Trigger: CTTCTGGAGAATAGCCGTGTGGCCCGGCAGCCGCAAGGGGAAGGAAACTTTGAAGTTTTCTCTCAGCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
3UTR CAA 72 bp CTGGGCTGTGATGGTGATGGAGTCCTTTGCCCAGCCTaGCTTTCCACTGTGGTTGGCACAAGACAGTGGATG +
Preference number: 4 (lower is better)
Translates to: LGCDGDGVLCPA*LSTVVGTRQWM
Trigger: CATCCACTGTCTTGTGCCAACCACAGTGGAAAGCAAGGCTGGGCAAAGGACTCCATCACCATCACAGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
CDS-3UTR TCA 90 bp AGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGACTACTTCTGGGGCTGTaGATGCTGCCGCCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: RSLVSLSLSLFLSLQCFGLLLGL*MLPPSS
Trigger: GGAGGAAGGCGGCAGCATTCACAGCCCCAGAAGTAG...TCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR TCA 90 bp CCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGTTGTTTCCTGCCTCCTaGGCTTGGGACCTGGTCCCC +
Preference number: 4 (lower is better)
Translates to: PGLSLSLSLSFSPVLWSRLFPAS*AWDLVP
Trigger: GGGGACCAGGTCCCAAGCTCAGGAGGCAGGAAACAA...CCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR TCA 90 bp GGTGATCTGCTAGGACATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGGCCCTTTGCAGCCTCTGCTaGTATCCCCGTTGTAGGAAT +
Preference number: 4 (lower is better)
Translates to: GDLLGHVSLGPSYVLRVALCSLC*YPRCRN
Trigger: ATTCCTACAACGGGGATATCAGCAGAGGCTGCAAAG...GGCCACCCTCAAGACATAGGATGGGCCCAGAGAGACATGTCCTAGCAGATCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR TCA 90 bp TGGATAGCAGGCCCCAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCGGCCGGTGGCATTaGAGTCCAATGACATCACCA +
Preference number: 4 (lower is better)
Translates to: WIAGPRSLVSLSLSLFLSLGRWH*SPMTSP
Trigger: TGGTGATGTCATTGGACTTCAATGCCACCGGCCGAG...AGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTGGGGCCTGCTATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR TCA 90 bp CAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGGCCGTAGGTGGTGCTTaGAGGTGGCGGTGTTCAGTT +
Preference number: 4 (lower is better)
Translates to: QEPGLSLSLSLSFSPVLWAVGGA*RWRCSV
Trigger: AACTGAACACCGCCACCTTCAAGCACCACCTACGGC...CCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR TCA 90 bp GGTGATCTGCTAGGACATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGGCCTCCTCACGGTCTTTCTaGTGCATCTGCTTCATCCTC +
Preference number: 4 (lower is better)
Translates to: GDLLGHVSLGPSYVLRVASSRSF*CICFIL
Trigger: GAGGATGAAGCAGATGCATCAGAAAGACCGTGAGGA...GGCCACCCTCAAGACATAGGATGGGCCCAGAGAGACATGTCCTAGCAGATCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR TCA 90 bp CAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGCTGAGGAGATGCACTTaGGACTGGTGGACCGGGAGA +
Preference number: 4 (lower is better)
Translates to: QEPGLSLSLSLSFSPVLWLRRCT*DWWTGR
Trigger: TCTCCCGGTCCACCAGTCTCAAGTGCATCTCCTCAG...CCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp TGGATAGCAGGCCCCAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTGACTCACCTTCTTTTTaGCCGATGGTCTGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: WIAGPRSLVSLSLSLFLSDSPSF*PMVWGS
Trigger: GGACCCCCAGACCATCGGGCAAAAAGAAGGTGAGTC...AGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTGGGGCCTGCTATCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp AGCAGGCCCCAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCACTCTACGTGACCTTCTaGCTGAGGCTTCACCACATC +
Preference number: 4 (lower is better)
Translates to: SRPQEPGLSLSLSLSFSPLYVTF*LRLHHI
Trigger: GATGTGGTGAAGCCTCAGGCAGAAGGTCACGTAGAG...TGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTGGGGCCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp CTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGGAGTCTGCCGTCCACGCTGCCTaGCATACCCACCAGGTGTTC +
Preference number: 4 (lower is better)
Translates to: LSLSLSLSFSPVLWSRESAVHAA*HTHQVF
Trigger: GAACACCTGGTGGGTATGGCAGGCAGCGTGGACGGC...AGACTCCCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp CCTGGTGATCTGCTAGGACATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGGAAGGCACTGCTCTCTaGCATCTGATGCAGGTTCAG +
Preference number: 4 (lower is better)
Translates to: PGDLLGHVSLGPSYVLRVEGTAL*HLMQVQ
Trigger: CTGAACCTGCATCAGATGGCAGAGAGCAGTGCCTTC...CACCCTCAAGACATAGGATGGGCCCAGAGAGACATGTCCTAGCAGATCACCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp CAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGCTGGATCCTCTGCTGTaGCTCCTCCAGCTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: QEPGLSLSLSLSFSPVLWLDPLL*LLQLLL
Trigger: CAGAAGCAGCTGGAGGAGGCACAGCAGAGGATCCAG...CCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp CATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGGCCATGTGTTCTGGCTCTGCTGCTACAGTCCACTaGCGTCTGGACACTTTCTGT +
Preference number: 4 (lower is better)
Translates to: HVSLGPSYVLRVAMCSGSAATVH*RLDTFC
Trigger: ACAGAAAGTGTCCAGACGGCAGTGGACTGTAGCAGC...AGAGCCAGAACACATGGCCACCCTCAAGACATAGGATGGGCCCAGAGAGACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp CCTGGTGATCTGCTAGGACATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGATCGTCGTCTCTCCTTaGAGAGCCAGGATCTCTGTG +
Preference number: 4 (lower is better)
Translates to: PGDLLGHVSLGPSYVLRVIVVSP*RARISV
Trigger: CACAGAGATCCTGGCTCTGCAAGGAGAGACGACGAT...CACCCTCAAGACATAGGATGGGCCCAGAGAGACATGTCCTAGCAGATCACCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp AGCAGGCCCCAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCACCGCCTTCCTCCTCCTaGCTTCTTTGGACTCTTTCT +
Preference number: 4 (lower is better)
Translates to: SRPQEPGLSLSLSLSFSPPPSSS*LLWTLS
Trigger: AGAAAGAGTCCAAAGAAGCCAGGAGGAGGAAGGCGG...TGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTGGGGCCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp GGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGCGGGGGCTCCTTTCCTaGAATGTCTGCGCTGTTCTG +
Preference number: 4 (lower is better)
Translates to: GAWSLSLSLSFFLSSALERGLLS*NVCAVL
Trigger: CAGAACAGCGCAGACATTCCAGGAAAGGAGCCCCCG...CTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp CATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGGCCATGTGTTCTGGCTCTCCTTCTGATCTGCCTTaGCCAACTCTGGATCCAGCT +
Preference number: 4 (lower is better)
Translates to: HVSLGPSYVLRVAMCSGSPSDLP*PTLDPA
Trigger: AGCTGGATCCAGAGTTGGCCAAGGCAGATCAGAAGG...AGAGCCAGAACACATGGCCACCCTCAAGACATAGGATGGGCCCAGAGAGACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp CCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGCTGAAGAGGGCACTGTaGTCGTCTGTGGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: PGLSLSLSLSFSPVLWSRLKRAL*SSVAAG
Trigger: CCCTGCAGCCACAGACGACCACAGTGCCCTCTTCAG...CCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp CCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGAGGGCTTCAGCAGCGTaGTTGGCCCACTCAAACCGC +
Preference number: 4 (lower is better)
Translates to: PGLSLSLSLSFSPVLWSRRASAA*LAHSNR
Trigger: GCGGTTTGAGTGGGCCAACCACGCTGCTGAAGCCCT...CCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp TGGATAGCAGGCCCCAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTTCGTTGGCTACACCTTaGTCCCCACTGGGCTGTGAT +
Preference number: 4 (lower is better)
Translates to: WIAGPRSLVSLSLSLFLSSLATP*SPLGCD
Trigger: ATCACAGCCCAGTGGGGACCAAGGTGTAGCCAACGA...AGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTGGGGCCTGCTATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp GGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGGCCTTGAGGAAAACTTaGCTGTGCCCCACGGCCACA +
Preference number: 4 (lower is better)
Translates to: GAWSLSLSLSFFLSSALEALRKT*LCPTAT
Trigger: TGTGGCCGTGGGGCACAGCCAAGTTTTCCTCAAGGC...CTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp CAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGTCCAACTCAAACCGCTaGCGAAGCTGCTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: QEPGLSLSLSLSFSPVLWSNSNR*RSCSSC
Trigger: GCAGCTGGAGCAGCTTCGCCAGCGGTTTGAGTTGGA...CCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR TCA 90 bp CAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGGTTCTGAGTGGTGGATaGGCTGTCCTGGGAAGTCTG +
Preference number: 4 (lower is better)
Translates to: QEPGLSLSLSLSFSPVLWVLSGG*AVLGSL
Trigger: CAGACTTCCCAGGACAGCTCATCCACCACTCAGAAC...CCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR TCA 90 bp TCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGGAGTCTCTGGTGGGACCTGACTCCTaGGGTCTCTCCCCACTAGTG +
Preference number: 4 (lower is better)
Translates to: SLSLSLSFSPVLWSRESLVGPDS*GLSPLV
Trigger: CACTAGTGGGGAGAGACCTCAGGAGTCAGGTCCCAC...CAGAGACTCCCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR TCA 90 bp TGGATAGCAGGCCCCAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTTTTCCCTCTGTGCCCTaGCATTTCCCACCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: WIAGPRSLVSLSLSLFLSFPSVP*HFPPFV
Trigger: CACAAAGGGTGGGAAATGTCAGGGCACAGAGGGAAA...AGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTGGGGCCTGCTATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR TCA 90 bp CCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGAGACCACACCCGCCTTaGGGAAAACTTGGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: PGLSLSLSLSFSPVLWSRRPHPP*GKLGCA
Trigger: GGCACAGCCAAGTTTTCCTCAAGGCGGGTGTGGTCT...CCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR TCA 90 bp CAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGTGCAGCTGTAGCTCCTaGATCTGCCCGATGTCAGCA +
Preference number: 4 (lower is better)
Translates to: QEPGLSLSLSLSFSPVLWCSCSS*ICPMSA
Trigger: TGCTGACATCGGGCAGATTCAGGAGCTACAGCTGCA...CCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR TCA 90 bp TCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGGAGTCTCTGTCTGCCTCTCCTAAGTaGGGAAGCCCGGGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: SLSLSLSFSPVLWSRESLSASPK*GSPGGL
Trigger: CAGACCACCCGGGCTTCCTCACTTAGGAGAGGCAGA...CAGAGACTCCCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp AGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTGGGTTCTGCTAGCTaGCCACAGCTCCTGTCTACC +
Preference number: 4 (lower is better)
Translates to: RSLVSLSLSLFLSLQCFGVGSAS*PQLLST
Trigger: GGTAGACAGGAGCTGTGGGCAGCTAGCAGAACCCAC...TCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp CCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGATTCTGAGTCTTCGCTaGCACCCCAGGGAGCTCTCG +
Preference number: 4 (lower is better)
Translates to: PGLSLSLSLSFSPVLWSRILSLR*HPRELS
Trigger: CGAGAGCTCCCTGGGGTGGCAGCGAAGACTCAGAAT...CCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp AGCAGGCCCCAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCACAGCCAGACTTTCTGTaGCTCGTACCATCTATCCTC +
Preference number: 4 (lower is better)
Translates to: SRPQEPGLSLSLSLSFSPQPDFL*LVPSIL
Trigger: GAGGATAGATGGTACGAGGCACAGAAAGTCTGGCTG...TGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTGGGGCCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp CCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGTTTGCACGCTCCTGCTaGACCCAGGTGGTAGATGGC +
Preference number: 4 (lower is better)
Translates to: PGLSLSLSLSFSPVLWSRFARSC*TQVVDG
Trigger: GCCATCTACCACCTGGGTGCAGCAGGAGCGTGCAAA...CCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp CAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGATCTGCCGTAGGTGGTaGTTGAAGGTGGCGGTGTTC +
Preference number: 4 (lower is better)
Translates to: QEPGLSLSLSLSFSPVLWICRRW*LKVAVF
Trigger: GAACACCGCCACCTTCAAGCACCACCTACGGCAGAT...CCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp GGTGATCTGCTAGGACATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGGCCCAAAGGGCACGGGAATaGCTTCCTCTTTGTATCTCT +
Preference number: 4 (lower is better)
Translates to: GDLLGHVSLGPSYVLRVAQRARE*LPLCIS
Trigger: AGAGATACAAAGAGGAAGGCATTCCCGTGCCCTTTG...GGCCACCCTCAAGACATAGGATGGGCCCAGAGAGACATGTCCTAGCAGATCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp TGGATAGCAGGCCCCAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTGTCACTGGAGCCTTaGACCCGGACTTCTTCATCT +
Preference number: 4 (lower is better)
Translates to: WIAGPRSLVSLSLSLFLSLSLEP*TRTSSS
Trigger: AGATGAAGAAGTCCGGGTGCAAGGCTCCAGTGACAG...AGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTGGGGCCTGCTATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp TCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGGAGTCTCTGACCACACGACTCCGGTaGAGAGCCTGCTGGGAGGTA +
Preference number: 4 (lower is better)
Translates to: SLSLSLSFSPVLWSRESLTTRLR*RACWEV
Trigger: TACCTCCCAGCAGGCTCTGCACCGGAGTCGTGTGGT...CAGAGACTCCCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp TGGATAGCAGGCCCCAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTTCCTTTGCCCAGCCTTaGTTTCCACTGTGGTTGGCA +
Preference number: 4 (lower is better)
Translates to: WIAGPRSLVSLSLSLFLSSFAQP*FPLWLA
Trigger: TGCCAACCACAGTGGAAAGCAAGGCTGGGCAAAGGA...AGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTGGGGCCTGCTATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp CCTGGTGATCTGCTAGGACATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGAGTGCCTGGGCCAGCTaGAAGTCAAACTTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: PGDLLGHVSLGPSYVLRVSAWAS*KSNFFC
Trigger: ACAGAAGAAGTTTGACTTGCAGCTGGCCCAGGCACT...CACCCTCAAGACATAGGATGGGCCCAGAGAGACATGTCCTAGCAGATCACCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp GCAGGCCCCAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTTTTCCAGTTCACTGTaGATGTTCTCCAGGTCCGCA +
Preference number: 4 (lower is better)
Translates to: AGPRSLVSLSLSLFLSLQFSSSL*MFSRSA
Trigger: TGCGGACCTGGAGAACATGCACAGTGAACTGGAAAA...CTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTGGGGCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp CATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGGCCATGTGTTCTGGCTCTGTTAGTTGGAACTGCTaGGATCTCTACTTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: HVSLGPSYVLRVAMCSGSVSWNC*DLYFWG
Trigger: GCCCCAGAAGTAGAGATCCCAGCAGTTCCAACTAAC...AGAGCCAGAACACATGGCCACCCTCAAGACATAGGATGGGCCCAGAGAGACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp CCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGTCCTGGGAAGTCTGCTaGCTTCCAGGCTTGGGGACA +
Preference number: 4 (lower is better)
Translates to: PGLSLSLSLSFSPVLWSRSWEVC*LPGLGT
Trigger: TGTCCCCAAGCCTGGAAGCCAGCAGACTTCCCAGGA...CCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp CAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGCAGAGGAAGTCCCCGTaGTCACCCCTTTCTTTGTCC +
Preference number: 4 (lower is better)
Translates to: QEPGLSLSLSLSFSPVLWQRKSP*SPLSLS
Trigger: GGACAAAGAAAGGGGTGACCACGGGGACTTCCTCTG...CCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp CTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGGAGTCTTCAGGCATAGAAGGCTaGGGGGCAGAGGAAGTCCCC +
Preference number: 4 (lower is better)
Translates to: LSLSLSLSFSPVLWSRESSGIEG*GAEEVP
Trigger: GGGGACTTCCTCTGCCCCCCAGCCTTCTATGCCTGA...AGACTCCCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp CCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGTCCTTCCATCTTCACTaGAGCCTCCTGCTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: PGLSLSLSLSFSPVLWSRSFHLH*SLLLLP
Trigger: GGGCAGCAGCAGGAGGCTCCAGTGAAGATGGAAGGA...CCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp CCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGGCTTGTCTTCAGGCTTaGACCACAGGCCCATGCCGA +
Preference number: 4 (lower is better)
Translates to: PGLSLSLSLSFSPVLWSRACLQA*TTGPCR
Trigger: TCGGCATGGGCCTGTGGTCCAAGCCTGAAGACAAGC...CCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp TGGATAGCAGGCCCCAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTATAATCTGCCGTAGGTaGTGCTTGAAGGTGGCGGTG +
Preference number: 4 (lower is better)
Translates to: WIAGPRSLVSLSLSLFLSIICRR*CLKVAV
Trigger: CACCGCCACCTTCAAGCACCACCTACGGCAGATTAT...AGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTGGGGCCTGCTATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp CCTGGTGATCTGCTAGGACATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGGCCATAGACAGATGGTaGGAGGAGAAGGATCTGTTG +
Preference number: 4 (lower is better)
Translates to: PGDLLGHVSLGPSYVLRVAIDRW*EEKDLL
Trigger: CAACAGATCCTTCTCCTCCCACCATCTGTCTATGGC...CACCCTCAAGACATAGGATGGGCCCAGAGAGACATGTCCTAGCAGATCACCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp AGCAGGCCCCAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGAAGCCATAGACAGATaGTGGGAGGAGAAGGATCTG +
Preference number: 4 (lower is better)
Translates to: SRPQEPGLSLSLSLSFSPEAIDR*WEEKDL
Trigger: CAGATCCTTCTCCTCCCACCATCTGTCTATGGCTTC...TGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTGGGGCCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp CATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGGCCATGTGTTCTGGCTCTGTTGGCACAAGACAGTaGATGAAATGCAGCCGAGAC +
Preference number: 4 (lower is better)
Translates to: HVSLGPSYVLRVAMCSGSVGTRQ*MKCSRD
Trigger: GTCTCGGCTGCATTTCATCCACTGTCTTGTGCCAAC...AGAGCCAGAACACATGGCCACCCTCAAGACATAGGATGGGCCCAGAGAGACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp CCTGGTGATCTGCTAGGACATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGCCTTGCTTTCCACTGTaGTTGGCACAAGACAGTGGA +
Preference number: 4 (lower is better)
Translates to: PGDLLGHVSLGPSYVLRVPCFPL*LAQDSG
Trigger: TCCACTGTCTTGTGCCAACCACAGTGGAAAGCAAGG...CACCCTCAAGACATAGGATGGGCCCAGAGAGACATGTCCTAGCAGATCACCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp AGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGATCACTCTCCAGCGCCTaGCAGGCCACATCTCCTTTG +
Preference number: 4 (lower is better)
Translates to: RSLVSLSLSLFLSLQCFGSLSSA*QATSPL
Trigger: CAAAGGAGATGTGGCCTGCCAGGCGCTGGAGAGTGA...TCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp CTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGGAGTCTGACTCCCCCAGTGCCTaGGCCAGCTGCAAGTCAAAC +
Preference number: 4 (lower is better)
Translates to: LSLSLSLSFSPVLWSRESDSPSA*ASCKSN
Trigger: GTTTGACTTGCAGCTGGCCCAGGCACTGGGGGAGTC...AGACTCCCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp AGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAATGCGTCCTCACACTTaGCCTCGCTCTGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: RSLVSLSLSLFLSLQCFGMRPHT*PRSAPA
Trigger: AGCTGGAGCAGAGCGAGGCCAAGTGTGAGGACGCAT...TCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp CTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGGAGTCTCCGCGATGCGTCGGATaGACGTCTCCAGGTCTGTCT +
Preference number: 4 (lower is better)
Translates to: LSLSLSLSFSPVLWSRESPRCVG*TSPGLS
Trigger: AGACAGACCTGGAGACGTCCATCCGACGCATCGCGG...AGACTCCCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp AGCAGGCCCCAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCACAGTCCACTGCCGTCTaGACACTTTCTGTGTCACTA +
Preference number: 4 (lower is better)
Translates to: SRPQEPGLSLSLSLSFSPQSTAV*TLSVSL
Trigger: TAGTGACACAGAAAGTGTCCAGACGGCAGTGGACTG...TGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTGGGGCCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp CAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGTTGCAGACTGCCCTCTaGCTGGGAGCTGATGACAGA +
Preference number: 4 (lower is better)
Translates to: QEPGLSLSLSLSFSPVLWLQTAL*LGADDR
Trigger: TCTGTCATCAGCTCCCAGCCAGAGGGCAGTCTGCAA...CCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp CATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGGCCATGTGTTCTGGCTCTATGGTAGGGCTTTTGTaGGAAGACTGGGTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: HVSLGPSYVLRVAMCSGSMVGLL*EDWVER
Trigger: TCTCTCCACCCAGTCTTCCCACAAAAGCCCTACCAT...AGAGCCAGAACACATGGCCACCCTCAAGACATAGGATGGGCCCAGAGAGACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp CCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGTGCAGAGTGGAACCCTaGCCTCTCTGGGCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: PGLSLSLSLSFSPVLWSRCRVEP*PLWALF
Trigger: GAAGAGAGCCCAGAGAGGCCAGGGTTCCACTCTGCA...CCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp AGCAGGCCCCAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTCCTCCTTGACCTCTaGGCTCTTCTTCAAGATGGT +
Preference number: 4 (lower is better)
Translates to: SRPQEPGLSLSLSLSFSPVLLDL*ALLQDG
Trigger: ACCATCTTGAAGAAGAGCCCAGAGGTCAAGGAGGAC...TGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTGGGGCCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
3UTR CAA 72 bp TCTGGGAGGTCAAAGGGCACGGGAATGCCTTCCTCTTaGTATCTCTCCAGAGTAGAGACAAAGGTCCTGTGG +
Preference number: 4 (lower is better)
Translates to: SGRSKGTGMPSS*YLSRVETKVLW
Trigger: CCACAGGACCTTTGTCTCTACTCTGGAGAGATACAAAGAGGAAGGCATTCCCGTGCCCTTTGACCTCCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
CDS-3UTR TCA 90 bp CAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGGGTTCAGCTCTGTCCTaGGATCTACATCCATCCCAG +
Preference number: 4 (lower is better)
Translates to: QEPGLSLSLSLSFSPVLWGSALS*DLHPSQ
Trigger: CTGGGATGGATGTAGATCTCAGGACAGAGCTGAACC...CCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR TCA 90 bp GGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGCATCCATCTGCAGCTTaGTTTGGGCACAAGGAGCCT +
Preference number: 4 (lower is better)
Translates to: GAWSLSLSLSFFLSSALEHPSAA*FGHKEP
Trigger: AGGCTCCTTGTGCCCAAATCAAGCTGCAGATGGATG...CTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR TCA 90 bp TCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGGAGTCTCTGCCGGGCCTTCATCTCTaGGTCCAATCTCTCCTCGCA +
Preference number: 4 (lower is better)
Translates to: SLSLSLSFSPVLWSRESLPGLHL*VQSLLA
Trigger: TGCGAGGAGAGATTGGACTCAGAGATGAAGGCCCGG...CAGAGACTCCCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR TCA 90 bp AGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGATGTGGAAAGAGCTGCTaGCCACTGACTGTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: RSLVSLSLSLFLSLQCFGCGKSC*PLTVQR
Trigger: CCTCTGGACAGTCAGTGGTCAGCAGCTCTTTCCACA...TCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR TCA 90 bp TCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGGAGTCTCTGTGTCAGGCAGTAGGGTaGTGTCCTCTGGACCCTCTG +
Preference number: 4 (lower is better)
Translates to: SLSLSLSFSPVLWSRESLCQAVG*CPLDPL
Trigger: CAGAGGGTCCAGAGGACATCACCCTACTGCCTGACA...CAGAGACTCCCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp GGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTCTTCTCGAATCTTCTaGTCCCACAGGGCAAGGCGT +
Preference number: 4 (lower is better)
Translates to: GAWSLSLSLSFFLSSALESSRIF*SHRARR
Trigger: ACGCCTTGCCCTGTGGGAGCAGAAGATTCGAGAAGA...CTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp GCAGGCCCCAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGATTTCCCACCCTTTGTaGTTTGGCCTGTATCTCCAA +
Preference number: 4 (lower is better)
Translates to: AGPRSLVSLSLSLFLSLQISHPL*FGLYLQ
Trigger: TTGGAGATACAGGCCAAAGCACAAAGGGTGGGAAAT...CTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTGGGGCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp AGCAGGCCCCAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAATCTGCTCGATAATCTaGCGTAGGTGGTGCTTGAAG +
Preference number: 4 (lower is better)
Translates to: SRPQEPGLSLSLSLSFSPICSII*RRWCLK
Trigger: CTTCAAGCACCACCTACGGCAGATTATCGAGCAGAT...TGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTGGGGCCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp TGGATAGCAGGCCCCAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTAGACAGTGGATGAAATaGAGCCGAGACCTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: WIAGPRSLVSLSLSLFLSRQWMK*SRDLLS
Trigger: GCTGAGAAGGTCTCGGCTGCATTTCATCCACTGTCT...AGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTGGGGCCTGCTATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp GGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGGGTGATGGAGTCCTTTaGCCAGCCTTGCTTTCCACT +
Preference number: 4 (lower is better)
Translates to: GAWSLSLSLSFFLSSALEGDGVL*PALLST
Trigger: AGTGGAAAGCAAGGCTGGGCAAAGGACTCCATCACC...CTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp CCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGGAGCTGAACCCTCAGTaGTGGGATGTCCAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: PGLSLSLSLSFSPVLWSRELNPQ*WDVQSC
Trigger: ACAGCTCTGGACATCCCAGCACTGAGGGTTCAGCTC...CCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp AGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAAGGAAAACTTGGCTGTaGCCCACGGCCACAGCTTTC +
Preference number: 4 (lower is better)
Translates to: RSLVSLSLSLFLSLQCFGRKTWL*PTATAF
Trigger: GAAAGCTGTGGCCGTGGGGCACAGCCAAGTTTTCCT...TCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp CTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGGAGTCTCAGTCCAAACGCATCTaGCACTCGTCTGCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: LSLSLSLSFSPVLWSRESQSKRI*HSSAPP
Trigger: AGGGGGAGCAGACGAGTGGCAGATGCGTTTGGACTG...AGACTCCCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp CCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGGCTTCCTGCTCCTTTTaGTCTAGCTGCTGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: PGLSLSLSLSFSPVLWSRASCSF*SSCCWS
Trigger: GCTCCAGCAGCAGCTAGAGCAAAAGGAGCAGGAAGC...CCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp GGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGCTTCTGGGTCTTCAATaGGTCCTCACACTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: GAWSLSLSLSFFLSSALELLGLQ*VLTLGL
Trigger: GAGGCCAAGTGTGAGGACGCATTGAAGACCCAGAAG...CTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp TGGATAGCAGGCCCCAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTTCAGCTTTCTCCTCGTaGAGGGTCCCGATTCTAAGA +
Preference number: 4 (lower is better)
Translates to: WIAGPRSLVSLSLSLFLSSAFSS*RVPILR
Trigger: TCTTAGAATCGGGACCCTGCACGAGGAGAAAGCTGA...AGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTGGGGCCTGCTATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp CATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGGCCATGTGTTCTGGCTCTATCTGCAGCTTGATTTaGGCACAAGGAGCCTTCCTT +
Preference number: 4 (lower is better)
Translates to: HVSLGPSYVLRVAMCSGSICSLI*AQGAFL
Trigger: AAGGAAGGCTCCTTGTGCCCAAATCAAGCTGCAGAT...AGAGCCAGAACACATGGCCACCCTCAAGACATAGGATGGGCCCAGAGAGACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp CTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGGAGTCTCTGAACCCTCAGTGCTaGGATGTCCAGAGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: LSLSLSLSFSPVLWSRESLNPQC*DVQSCG
Trigger: CCCACAGCTCTGGACATCCCAGCACTGAGGGTTCAG...AGACTCCCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp CTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGGAGTCTTTCTCACTGAGTCCGTaGCCAGGGACAGGGAACAGC +
Preference number: 4 (lower is better)
Translates to: LSLSLSLSFSPVLWSRESFSLSP*PGTGNS
Trigger: GCTGTTCCCTGTCCCTGGCCACGGACTCAGTGAGAA...AGACTCCCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp GCAGGCCCCAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTATCACTCTTCCTTATaGCCGGGAGGAAGTCATCAA +
Preference number: 4 (lower is better)
Translates to: AGPRSLVSLSLSLFLSLQYHSSL*PGGSHQ
Trigger: TTGATGACTTCCTCCCGGCCATAAGGAAGAGTGATA...CTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTGGGGCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR TCA 90 bp TCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGGAGTCTCTGATGTCTGCGCTGTTCTaGGTGGTGGATGAGCTGTCC +
Preference number: 4 (lower is better)
Translates to: SLSLSLSFSPVLWSRESLMSALF*VVDELS
Trigger: GGACAGCTCATCCACCACTCAGAACAGCGCAGACAT...CAGAGACTCCCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR TCA 90 bp CAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGGGCATTGAAGTCCAATaGCATCACCATGGCAAAGCG +
Preference number: 4 (lower is better)
Translates to: QEPGLSLSLSLSFSPVLWGIEVQ*HHHGKA
Trigger: CGCTTTGCCATGGTGATGTCATTGGACTTCAATGCC...CCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR TCA 90 bp TCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGGAGTCTCTGTGGAAAAGCTCACACTaGAGGGGCTGCTCACAGGTC +
Preference number: 4 (lower is better)
Translates to: SLSLSLSFSPVLWSRESLWKSSH*RGCSQV
Trigger: GACCTGTGAGCAGCCCCTTCAGTGTGAGCTTTTCCA...CAGAGACTCCCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR TCA 90 bp TGGATAGCAGGCCCCAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTGACTCACTTTCTCCCTaGGGCTCTTCTCAAACATTG +
Preference number: 4 (lower is better)
Translates to: WIAGPRSLVSLSLSLFLSDSLSP*GSSQTL
Trigger: CAATGTTTGAGAAGAGCCTCAGGGAGAAAGTGAGTC...AGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTGGGGCCTGCTATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR TCA 90 bp CTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGGAGTCTGTCCTCTGGACCCTCTaGGGAGATGCACTTGAGACT +
Preference number: 4 (lower is better)
Translates to: LSLSLSLSFSPVLWSRESVLWTL*GDALET
Trigger: AGTCTCAAGTGCATCTCCTCAGAGGGTCCAGAGGAC...AGACTCCCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp TCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGGAGTCTCTGTCCCCTTTCCCTCTGTaGCCTGACATTTCCCACCCT +
Preference number: 4 (lower is better)
Translates to: SLSLSLSFSPVLWSRESLSPFPL*PDISHP
Trigger: AGGGTGGGAAATGTCAGGGCACAGAGGGAAAGGGGA...CAGAGACTCCCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp CCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGTCCCCTGCTCCTCTGTaGTCTGAGACTCACCTTCTT +
Preference number: 4 (lower is better)
Translates to: PGLSLSLSLSFSPVLWSRSPAPL*SETHLL
Trigger: AAGAAGGTGAGTCTCAGAGCACAGAGGAGCAGGGGA...CCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp CCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGTTGCTCCTTGTTTCCTaGCTCCTGAGCTTGGGACCT +
Preference number: 4 (lower is better)
Translates to: PGLSLSLSLSFSPVLWSRLLLVS*LLSLGP
Trigger: AGGTCCCAAGCTCAGGAGGCAGGAAACAAGGAGCAA...CCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp AGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTGAACCCGTCCTTCTaGACCAGCCAGACTTTCTGT +
Preference number: 4 (lower is better)
Translates to: RSLVSLSLSLFLSLQCFGVNPSF*TSQTFC
Trigger: ACAGAAAGTCTGGCTGGTGCAGAAGGACGGGTTCAC...TCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp AGCAGGCCCCAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCATCTGCTCTCTCAAACTaGAACCTGTACAGTTGCTCA +
Preference number: 4 (lower is better)
Translates to: SRPQEPGLSLSLSLSFSPSALSN*NLYSCS
Trigger: TGAGCAACTGTACAGGTTGCAGTTTGAGAGAGCAGA...TGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTGGGGCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp GGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTCTGGGCTCTCTTCCTaGGTAGCTCTTCCACAAACT +
Preference number: 4 (lower is better)
Translates to: GAWSLSLSLSFFLSSALESGLSS*VALPQT
Trigger: AGTTTGTGGAAGAGCTACGCAGGAAGAGAGCCCAGA...CTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp CCTGGTGATCTGCTAGGACATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGGTTGGTTTGGTTAGTTaGAACTGCTGGGATCTCTAC +
Preference number: 4 (lower is better)
Translates to: PGDLLGHVSLGPSYVLRVVGLVS*NCWDLY
Trigger: GTAGAGATCCCAGCAGTTCCAACTAACCAAACCAAC...CACCCTCAAGACATAGGATGGGCCCAGAGAGACATGTCCTAGCAGATCACCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp AGCAGGCCCCAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCATTGGTCTTGTTGGTTTaGTTAGTTGGAACTGCTGGG +
Preference number: 4 (lower is better)
Translates to: SRPQEPGLSLSLSLSFSPLVLLV*LVGTAG
Trigger: CCCAGCAGTTCCAACTAACCAAACCAACAAGACCAA...TGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTGGGGCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp CCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGTCCCTCCAGAATCTTTaGCTGGAGCTGGGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: PGLSLSLSLSFSPVLWSRSLQNL*LELGSC
Trigger: ACAAGACCCCAGCTCCAGCCAAAGATTCTGGAGGGA...CCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp CCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGCAGCCCCTGCAACCTTaGGCTCATCCTCTTTTTCCA +
Preference number: 4 (lower is better)
Translates to: PGLSLSLSLSFSPVLWSRQPLQP*AHPLFP
Trigger: TGGAAAAAGAGGATGAGCCCAAGGTTGCAGGGGCTG...CCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp TCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGGAGTCTCTGCTCTGGTCTCTCCGCTaGCTAAGCAGTGCCCAGTAT +
Preference number: 4 (lower is better)
Translates to: SLSLSLSFSPVLWSRESLLWSLR*LSSAQY
Trigger: ATACTGGGCACTGCTTAGCCAGCGGAGAGACCAGAG...CAGAGACTCCCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp TCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGGAGTCTCTGAGCAGCTCCCTTTTCTaGCCCTGTAGCCTTTCCACC +
Preference number: 4 (lower is better)
Translates to: SLSLSLSFSPVLWSRESLSSSLF*PCSLST
Trigger: GGTGGAAAGGCTACAGGGCCAGAAAAGGGAGCTGCT...CAGAGACTCCCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp CATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGGCCATGTGTTCTGGCTCTATGGTATTTTCCTGCTaGCTGTGGATCTTCTGTTGC +
Preference number: 4 (lower is better)
Translates to: HVSLGPSYVLRVAMCSGSMVFSC*LWIFCC
Trigger: GCAACAGAAGATCCACAGCCAGCAGGAAAATACCAT...AGAGCCAGAACACATGGCCACCCTCAAGACATAGGATGGGCCCAGAGAGACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR TCA 90 bp AGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGACCAGCTCTTCCTTGCTaGTTGACGTCTTGCTGTCTT +
Preference number: 4 (lower is better)
Translates to: RSLVSLSLSLFLSLQCFGPALPC*LTSCCL
Trigger: AAGACAGCAAGACGTCAATCAGCAAGGAAGAGCTGG...TCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR TCA 90 bp AGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGACAGCTGACTGTGCAATaGGGTCTTTGTGCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: RSLVSLSLSLFLSLQCFGQLTVQ*GLCASA
Trigger: TGCAGAAGCACAAAGACCTCATTGCACAGTCAGCTG...TCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR TCA 90 bp CTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGGAGTCTCCCGATGTCAGCAGCTaGCTGTGCAATGAGGTCTTT +
Preference number: 4 (lower is better)
Translates to: LSLSLSLSFSPVLWSRESPDVSS*LCNEVF
Trigger: AAAGACCTCATTGCACAGTCAGCTGCTGACATCGGG...AGACTCCCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR TCA 90 bp GGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTCTTCAAGATGGTTTTaGTCCCCGAGAGAAAGGAGC +
Preference number: 4 (lower is better)
Translates to: GAWSLSLSLSFFLSSALESSRWF*SPRERS
Trigger: GCTCCTTTCTCTCGGGGATCAAAACCATCTTGAAGA...CTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp CTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGGAGTCTTCCTATCCGGGGCCTTaGAGCTTTCCTCAGGATTCT +
Preference number: 4 (lower is better)
Translates to: LSLSLSLSFSPVLWSRESSYPGP*SFPQDS
Trigger: AGAATCCTGAGGAAAGCTGCAAGGCCCCGGATAGGA...AGACTCCCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp CCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGTCATGGTTCCTACTCTaGTGGTTCTCTAGCAGCACC +
Preference number: 4 (lower is better)
Translates to: PGLSLSLSLSFSPVLWSRSWFLL*WFSSST
Trigger: GGTGCTGCTAGAGAACCAGCAGAGTAGGAACCATGA...CCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp CCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGCGAAGCTGCTCCAGCTaGTTGATGGTATTTTCCTGC +
Preference number: 4 (lower is better)
Translates to: PGLSLSLSLSFSPVLWSRRSCSS*LMVFSC
Trigger: GCAGGAAAATACCATCAAGCAGCTGGAGCAGCTTCG...CCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp TCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGGAGTCTCTGAAGCCTTCCAGGTCATaGTTCTCATGGAGAGCCACC +
Preference number: 4 (lower is better)
Translates to: SLSLSLSFSPVLWSRESLKPSRS*FSWRAT
Trigger: GGTGGCTCTCCATGAGAAGCATGACCTGGAAGGCTT...CAGAGACTCCCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp GGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGCGTTTGTCTCACAGTTaGCAGCTCCTCCACATACTT +
Preference number: 4 (lower is better)
Translates to: GAWSLSLSLSFFLSSALERLSHS*QLLHIL
Trigger: AAGTATGTGGAGGAGCTGGCAACTGTGAGACAAACG...CTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp CCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGGTCTCCAGGTCTGTCTaGAGCGTTTGTCTCACAGTT +
Preference number: 4 (lower is better)
Translates to: PGLSLSLSLSFSPVLWSRVSRSV*SVCLTV
Trigger: AACTGTGAGACAAACGCTGCAGACAGACCTGGAGAC...CCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp AGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGACTCTCGGGGTTTCCTTaGTGTCACCAGCTTTTTCTG +
Preference number: 4 (lower is better)
Translates to: RSLVSLSLSLFLSLQCFGLSGFP*CHQLFL
Trigger: CAGAAAAAGCTGGTGACACCAAGGAAACCCCGAGAG...TCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp CCTGGTGATCTGCTAGGACATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGAGGATTTTGAAAGCCTaGAGTGTCAACCACCATGAT +
Preference number: 4 (lower is better)
Translates to: PGDLLGHVSLGPSYVLRVRILKA*SVNHHD
Trigger: ATCATGGTGGTTGACACTCCAGGCTTTCAAAATCCT...CACCCTCAAGACATAGGATGGGCCCAGAGAGACATGTCCTAGCAGATCACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp AGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGGTGAGCCATCTTCTTaGCCTCTTCATACGCACTCT +
Preference number: 4 (lower is better)
Translates to: RSLVSLSLSLFLSLQCFGGEPSS*PLHTHS
Trigger: AGAGTGCGTATGAAGAGGCCAAGAAGATGGCTCACC...TCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp GGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTGCTGTCTTCAATGGTaGCCAGAAGGAGCTGAACAT +
Preference number: 4 (lower is better)
Translates to: GAWSLSLSLSFFLSSALECCLQW*PEGAEH
Trigger: ATGTTCAGCTCCTTCTGGCCACCATTGAAGACAGCA...CTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp AGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGATCATTCAGGTCACCCTaGTCCTCATCAATGCGCTTC +
Preference number: 4 (lower is better)
Translates to: RSLVSLSLSLFLSLQCFGSFRSP*SSSMRF
Trigger: GAAGCGCATTGATGAGGACCAGGGTGACCTGAATGA...TCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp AGCAGGCCCCAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCATTTATCTGCACCTTCTaGAATTCGGTCTTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: SRPQEPGLSLSLSLSFSPFICTF*NSVLFS
Trigger: GGAGAACAAGACCGAATTCCAGAAGGTGCAGATAAA...TGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTGGGGCCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp TCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGGAGTCTCTGCTTACCCTGGGACTGTaGAAAGAGCTGCTGACCACT +
Preference number: 4 (lower is better)
Translates to: SLSLSLSFSPVLWSRESLLTLGL*KELLTT
Trigger: AGTGGTCAGCAGCTCTTTCCACAGTCCCAGGGTAAG...CAGAGACTCCCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
3UTR CAA 72 bp CAGCAAGCTGATAAGAGCATCCATCTGCAGCTTGATTaGGGCACAAGGAGCCTTCCTTTTCACTGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: QQADKSIHLQLD*GTRSLPFHCSK
Trigger: CTTGCTGCAGTGAAAAGGAAGGCTCCTTGTGCCCAAATCAAGCTGCAGATGGATGCTCTTATCAGCTTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
CDS-3UTR TCA 90 bp CAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGATCCCAGCCAGCAGCTaGGAGAAAACTTCAAAGTTT +
Preference number: 4 (lower is better)
Translates to: QEPGLSLSLSLSFSPVLWIPASS*EKTSKF
Trigger: AAACTTTGAAGTTTTCTCTCAGCTGCTGGCTGGGAT...CCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR TCA 90 bp TCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGGAGTCTCTGACTCCATTGTTCTCCTaGCTCACTTTCTCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: SLSLSLSFSPVLWSRESLTPLFS*LTFSLR
Trigger: CCTCAGGGAGAAAGTGAGTCAGGAGAACAATGGAGT...CAGAGACTCCCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR TCA 90 bp TCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGGAGTCTCTGCTTTGTGCTTCTGCATaGGGTCATTCAGGTCACCCT +
Preference number: 4 (lower is better)
Translates to: SLSLSLSFSPVLWSRESLLCASA*GHSGHP
Trigger: AGGGTGACCTGAATGACCTCATGCAGAAGCACAAAG...CAGAGACTCCCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp CTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGGAGTCTCCCTCCTTCTTTCTCTaGTGTTCCCAGTTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: LSLSLSLSFSPVLWSRESPSFFL*CSQLLL
Trigger: AAGGAGCAACTGGGAACAGCAGAGAAAGAAGGAGGG...AGACTCCCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp CTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGGAGTCTAGCCTTCCTTTTCACTaGAGCAAGGCTGCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: LSLSLSLSFSPVLWSRESSLPFH*SKAAGK
Trigger: TTTGCCAGCAGCCTTGCTGCAGTGAAAAGGAAGGCT...AGACTCCCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp CAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGCTGAACTTCCCCCAATaGATCTTGCACTTGCTGATA +
Preference number: 4 (lower is better)
Translates to: QEPGLSLSLSLSFSPVLWLNFPQ*ILHLLI
Trigger: TATCAGCAAGTGCAAGATGCATTGGGGGAAGTTCAG...CCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp CTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGGAGTCTAGCTTTGAGGCTTCCTaGTCCTTTTGCTCTAGCTGC +
Preference number: 4 (lower is better)
Translates to: LSLSLSLSFSPVLWSRESSFEAS*SFCSSC
Trigger: GCAGCTAGAGCAAAAGGAGCAGGAAGCCTCAAAGCT...AGACTCCCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp CTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGGAGTCTGCTCAAAGCCGAAGATaGTGTTCTCAGCCTCTCAGA +
Preference number: 4 (lower is better)
Translates to: LSLSLSLSFSPVLWSRESAQSRR*CSQPLR
Trigger: TCTGAGAGGCTGAGAACAGCATCTTCGGCTTTGAGC...AGACTCCCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp CTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGGAGTCTCTCTTCTCCAGCTCATaGTTCCTACTCTGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: LSLSLSLSFSPVLWSRESLFSSS*FLLCWF
Trigger: GAACCAGCAGAGTAGGAACCATGAGCTGGAGAAGAG...AGACTCCCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp TCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGGAGTCTCTGAGGGTGCTTTTTCTGTaGACAGCAAAGCCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: SLSLSLSFSPVLWSRESLRVLFL*TAKPSP
Trigger: TGGGGAAGGCTTTGCTGTCCACAGAAAAAGCACCCT...CAGAGACTCCCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp CTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGGAGTCTAAGCTTCCAGCTGAATaGGTCGCTGTCCAGAGTTTC +
Preference number: 4 (lower is better)
Translates to: LSLSLSLSFSPVLWSRESKLPAE*VAVQSF
Trigger: GAAACTCTGGACAGCGACCCATTCAGCTGGAAGCTT...AGACTCCCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
3UTR CAA 72 bp CTTCTCAGCAAGCTGATAAGAGCATCCATCTGCAGCTaGATTTGGGCACAAGGAGCCTTCCTTTTCACTGCA +
Preference number: 4 (lower is better)
Translates to: LLSKLIRASICS*IWAQGAFLFTA
Trigger: TGCAGTGAAAAGGAAGGCTCCTTGTGCCCAAATCAAGCTGCAGATGGATGCTCTTATCAGCTTGCTGAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
CDS-3UTR TCA 90 bp CTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGGAGTCTAGTCTGTGTTCTGTCTaGGCTCACTCCTCGAATTCT +
Preference number: 4 (lower is better)
Translates to: LSLSLSLSFSPVLWSRESSLCSV*AHSSNS
Trigger: AGAATTCGAGGAGTGAGCTCAGACAGAACACAGACT...AGACTCCCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp GGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTTTTCTTCATATTCCTaGTCCAACTGCATCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GAWSLSLSLSFFLSSALEFSSYS*SNCISS
Trigger: GCTGGAGATGCAGTTGGAGCAGGAATATGAAGAAAA...CTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp CCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGAGGTCTTTGTGCTTCTaGATGAGGTCATTCAGGTCA +
Preference number: 4 (lower is better)
Translates to: PGLSLSLSLSFSPVLWSRRSLCF*MRSFRS
Trigger: TGACCTGAATGACCTCATGCAGAAGCACAAAGACCT...CCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp AGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGCAATGAGGTCTTTGTaGTTCTGCATGAGGTCATTC +
Preference number: 4 (lower is better)
Translates to: RSLVSLSLSLFLSLQCFGAMRSL*FCMRSF
Trigger: GAATGACCTCATGCAGAAGCACAAAGACCTCATTGC...TCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp CTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGGAGTCTTCCTCCTGGCTTCTTTaGACTCTTTCTCTGTCTCTC +
Preference number: 4 (lower is better)
Translates to: LSLSLSLSFSPVLWSRESSSWLL*TLSLSL
Trigger: GAGAGACAGAGAAAGAGTCCAAAGAAGCCAGGAGGA...AGACTCCCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp TCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGGAGTCTCTGAGCTGTTCCCTCATCTaGTTTAAGCACCGTTGCAAG +
Preference number: 4 (lower is better)
Translates to: SLSLSLSFSPVLWSRESLSCSLI*FKHRCK
Trigger: CTTGCAACGGTGCTTAAACCAGATGAGGGAACAGCT...CAGAGACTCCCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp TCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGGAGTCTCTGGCTTTCCACTGTGGTTaGCACAAGACAGTGGATGAA +
Preference number: 4 (lower is better)
Translates to: SLSLSLSFSPVLWSRESLAFHCG*HKTVDE
Trigger: TTCATCCACTGTCTTGTGCCAACCACAGTGGAAAGC...CAGAGACTCCCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR GCA 90 bp CCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGATAAGAGCATCCATCTaGAGCTTGATTTGGGCACAA +
Preference number: 4 (lower is better)
Translates to: PGLSLSLSLSFSPVLWSRIRASI*SLIWAQ
Trigger: TTGTGCCCAAATCAAGCTGCAGATGGATGCTCTTAT...CCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CCA 90 bp CTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGGAGTCTAGCTTCTTATATTCCTaGCGAGACAGAAAGCCCCTA +
Preference number: 4 (lower is better)
Translates to: LSLSLSLSFSPVLWSRESSFLYS*RDRKPL
Trigger: TAGGGGCTTTCTGTCTCGCCAGGAATATAAGAAGCT...AGACTCCCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
3UTR CAA 72 bp TTATTTAAGGACCCAGGTGTCAACTGCTCTAGGCTCTaGAATTTCCTGGGCCAGGGGACTCTAAGAATGACA +
Preference number: 4 (lower is better)
Translates to: LFKDPGVNCSRL*NFLGQGTLRMT
Trigger: TGTCATTCTTAGAGTCCCCTGGCCCAGGAAATTCAAGAGCCTAGAGCAGTTGACACCTGGGTCCTTAAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
CDS-3UTR CCA 90 bp CTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGGAGTCTGAAAATTGTCGATTCTaGAAGACCAGAGGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: LSLSLSLSFSPVLWSRESENCRF*KTRGSF
Trigger: GAAGGAACCTCTGGTCTTCCAGAATCGACAATTTTC...AGACTCCCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS GCA 90 bp GGCTGCCCCGTGGACTCTGATAGCTGTCCCGTGGGCCCTGATGGCTaGCCCGTGGGCCCTGATGGCTGCCCTGTGGGTTCTGCTAGCTGC +
Preference number: 5 (lower is better)
Translates to: GCPVDSDSCPVGPDG*PVGPDGCPVGSASC
Trigger: GCAGCTAGCAGAACCCACAGGGCAGCCATCAGGGCCCACGGGGCAGCCATCAGGGCCCACGGGACAGCTATCAGAGTCCACGGGGCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS GCA 90 bp GGCTGCCCCGTGGGCCCTGATGGCTGCCCTGTGGGTTCTGCTAGCTaGCCACAGCTCCTGTCTACCGCTGGGCTTTGCAAGTCGCCGGTC +
Preference number: 5 (lower is better)
Translates to: GCPVGPDGCPVGSAS*PQLLSTAGLCKSPV
Trigger: GACCGGCGACTTGCAAAGCCCAGCGGTAGACAGGAGCTGTGGGCAGCTAGCAGAACCCACAGGGCAGCCATCAGGGCCCACGGGGCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CCA 90 bp CCGTGGACTCTGATAGCTGTCCCGTGGGCCCTGATGGCTGCCCCGTaGGCCCTGATGGCTGCCCTGTGGGTTCTGCTAGCTGCCCACAGC +
Preference number: 5 (lower is better)
Translates to: PWTLIAVPWALMAAP*ALMAALWVLLAAHS
Trigger: GCTGTGGGCAGCTAGCAGAACCCACAGGGCAGCCATCAGGGCCCACGGGGCAGCCATCAGGGCCCACGGGACAGCTATCAGAGTCCACGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CCA 90 bp GCGTCAGCTCCTCCTCCTTGGCTCGAAGCTGCTCAGTGCCGAGCGTaGAACTCAGCAGGGGCCGGAGAGACGCCAGGAGCCCCCACCATG +
Preference number: 5 (lower is better)
Translates to: ASAPPPWLEAAQCRA*NSAGAGETPGAPTM
Trigger: CATGGTGGGGGCTCCTGGCGTCTCTCCGGCCCCTGCTGAGTTCCACGCTCGGCACTGAGCAGCTTCGAGCCAAGGAGGAGGAGCTGACGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS GCA 90 bp GTCTCAGCAGCGTCAGCTCCTCCTCCTTGGCTCGAAGCTGCTCAGTaGCGAGCGTGGAACTCAGCAGGGGCCGGAGAGACGCCAGGAGCC +
Preference number: 5 (lower is better)
Translates to: VSAASAPPPWLEAAQ*RAWNSAGAGETPGA
Trigger: GGCTCCTGGCGTCTCTCCGGCCCCTGCTGAGTTCCACGCTCGGCACTGAGCAGCTTCGAGCCAAGGAGGAGGAGCTGACGCTGCTGAGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS TCA 90 bp GTCCACGGAGGACTCCAGACATGGCCGCCTGGGACGAAGCGTAGGTaGCAGGAGTCCCGTGGGGGAGCTCAGCTTTCTCCTCGTGCAGGG +
Preference number: 5 (lower is better)
Translates to: VHGGLQTWPPGTKRR*QESRGGAQLSPRAG
Trigger: CCCTGCACGAGGAGAAAGCTGAGCTCCCCCACGGGACTCCTGTCACCTACGCTTCGTCCCAGGCGGCCATGTCTGGAGTCCTCCGTGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CCA 90 bp TCCTGCGTAGCTCTTCCACAAACTCTGAGAGGGCCGCTGACGGGCTaGGCAGCTTGTCTCTGGACGGGGGTGACACAGCCGTGCGCTGGG +
Preference number: 5 (lower is better)
Translates to: SCVALPQTLRGPLTG*AACLWTGVTQPCAG
Trigger: CCCAGCGCACGGCTGTGTCACCCCCGTCCAGAGACAAGCTGCCCAGCCCGTCAGCGGCCCTCTCAGAGTTTGTGGAAGAGCTACGCAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS GCA 90 bp CTTCTTCCTCTGTGCACACACGGGGCTCCCCGGCTCCCTGCACCCTaGTCTCTGGCTGGCCGTCCCTCTTTGCAGCCTCTGCTGATATCC +
Preference number: 5 (lower is better)
Translates to: LLPLCTHGAPRLPAP*SLAGRPSLQPLLIS
Trigger: GGATATCAGCAGAGGCTGCAAAGAGGGACGGCCAGCCAGAGAGCAGGGTGCAGGGAGCCGGGGAGCCCCGTGTGTGCACAGAGGAAGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS GCA 90 bp AGCTTCTGTCTCAGCAGCGTCAGCTCCTCCTCCTTGGCTCGAAGCTaGTCAGTGCCGAGCGTGGAACTCAGCAGGGGCCGGAGAGACGCC +
Preference number: 5 (lower is better)
Translates to: SFCLSSVSSSSLARS*SVPSVELSRGRRDA
Trigger: GGCGTCTCTCCGGCCCCTGCTGAGTTCCACGCTCGGCACTGAGCAGCTTCGAGCCAAGGAGGAGGAGCTGACGCTGCTGAGACAGAAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CCA 90 bp CCAGGATCTCTGTGCTCGGGGGACATCCGCTCCCCGCCGTCACCTTaGAGTCTCGGGACTCTTGGACCACTTCCGGTGCCGCCTGTACTT +
Preference number: 5 (lower is better)
Translates to: PGSLCSGDIRSPPSP*SLGTLGPLPVPPVL
Trigger: AAGTACAGGCGGCACCGGAAGTGGTCCAAGAGTCCCGAGACTCCAAGGTGACGGCGGGGAGCGGATGTCCCCCGAGCACAGAGATCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS GCA 90 bp CGTGACCTTCTGCCTGAGGCTTCACCACATCCACTTCTTCCTCTGTaGACACACGGGGCTCCCCGGCTCCCTGCACCCTGCTCTCTGGCT +
Preference number: 5 (lower is better)
Translates to: RDLLPEASPHPLLPL*THGAPRLPAPCSLA
Trigger: AGCCAGAGAGCAGGGTGCAGGGAGCCGGGGAGCCCCGTGTGTGCACAGAGGAAGAAGTGGATGTGGTGAAGCCTCAGGCAGAAGGTCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS GCA 90 bp GGCCGGGTGGACCTGCTCCTCATCCACTTCGATGACAGTCCTGTCTaGATCGATGCAGAGCCGCACCCTTCCAGCAGGCGGGTCAGCTGT +
Preference number: 5 (lower is better)
Translates to: GRVDLLLIHFDDSPV*IDAEPHPSSRRVSC
Trigger: ACAGCTGACCCGCCTGCTGGAAGGGTGCGGCTCTGCATCGATGCAGACAGGACTGTCATCGAAGTGGATGAGGAGCAGGTCCACCCGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS GCA 90 bp CCCCCAGATGCAGAGTGGAACCCTGGCCTCTCTGGGCTCTCTTCCTaGGTAGCTCTTCCACAAACTCTGAGAGGGCCGCTGACGGGCTGG +
Preference number: 5 (lower is better)
Translates to: PPDAEWNPGLSGLSS*VALPQTLRGPLTGW
Trigger: CCAGCCCGTCAGCGGCCCTCTCAGAGTTTGTGGAAGAGCTACGCAGGAAGAGAGCCCAGAGAGGCCAGGGTTCCACTCTGCATCTGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS GCA 90 bp CCCCGGGTGGACCTGCTCCTCATCCACTTCGATGACAGTCCTGTCTaGATCGATGCAGAGCCGCACCCTTCCAGCAGGCGGGTCAGCTGT +
Preference number: 5 (lower is better)
Translates to: PRVDLLLIHFDDSPV*IDAEPHPSSRRVSC
Trigger: ACAGCTGACCCGCCTGCTGGAAGGGTGCGGCTCTGCATCGATGCAGACAGGACTGTCATCGAAGTGGATGAGGAGCAGGTCCACCCGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
CDS CCA 90 bp CTGAGCACAGTCCAAACGCATCTGCCACTCGTCTGCTCCCCCTGCTaGCTTCTCCTCCAGGTTGGCCCCCTGGATCCTCTGCTGTGCCTC +
Preference number: 5 (lower is better)
Translates to: LSTVQTHLPLVCSPC*LLLQVGPLDPLLCL
Trigger: GAGGCACAGCAGAGGATCCAGGGGGCCAACCTGGAGGAGAAGCCAGCAGGGGGAGCAGACGAGTGGCAGATGCGTTTGGACTGTGCTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CCA 90 bp TTGCCAGCTCCTCCACATACTTCTCCAGTTCCATGCAGCGCCGGCTaGCTTCCTCCTCCCGCTGGGCCAGCTCCTGCATCTCCGCCTTCA +
Preference number: 5 (lower is better)
Translates to: LPAPPHTSPVPCSAG*LPPPAGPAPASPPS
Trigger: TGAAGGCGGAGATGCAGGAGCTGGCCCAGCGGGAGGAGGAAGCCAGCCGGCGCTGCATGGAACTGGAGAAGTATGTGGAGGAGCTGGCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS TCA 90 bp TCACCAGCCCCCGGGGGCTCCTTTCCTGGAATGTCTGCGCTGTTCTaGGTGGTGGATGAGCTGTCCTGGGAAGTCTGCTGGCTTCCAGGC +
Preference number: 5 (lower is better)
Translates to: SPAPGGSFPGMSALF*VVDELSWEVCWLPG
Trigger: GCCTGGAAGCCAGCAGACTTCCCAGGACAGCTCATCCACCACTCAGAACAGCGCAGACATTCCAGGAAAGGAGCCCCCGGGGGCTGGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS TCA 90 bp GCTCAGAGGGGTTGGCCGGGTGGACCTGCTCCTCATCCACTTCGATaGCAGTCCTGTCTGCATCGATGCAGAGCCGCACCCTTCCAGCAG +
Preference number: 5 (lower is better)
Translates to: AQRGWPGGPAPHPLR*QSCLHRCRAAPFQQ
Trigger: CTGCTGGAAGGGTGCGGCTCTGCATCGATGCAGACAGGACTGTCATCGAAGTGGATGAGGAGCAGGTCCACCCGGCCAACCCCTCTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS TCA 90 bp CAGCGAGAGGTCTCCCTCATCGCTACTGGCTCTGCCTCTCCTAAGTaGGGAAGCCCGGGTGGTCTGGAAGATGGGGAGCACAGGGCCATC +
Preference number: 5 (lower is better)
Translates to: QREVSLIATGSASPK*GSPGGLEDGEHRAI
Trigger: GATGGCCCTGTGCTCCCCATCTTCCAGACCACCCGGGCTTCCTCACTTAGGAGAGGCAGAGCCAGTAGCGATGAGGGAGACCTCTCGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS GCA 90 bp CATCTGAGCACAGTCCAAACGCATCTGCCACTCGTCTGCTCCCCCTaGTGGCTTCTCCTCCAGGTTGGCCCCCTGGATCCTCTGCTGTGC +
Preference number: 5 (lower is better)
Translates to: HLSTVQTHLPLVCSP*WLLLQVGPLDPLLC
Trigger: GCACAGCAGAGGATCCAGGGGGCCAACCTGGAGGAGAAGCCAGCAGGGGGAGCAGACGAGTGGCAGATGCGTTTGGACTGTGCTCAGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS GCA 90 bp ATGCTTTCCACATCGTCGTCTCTCCTTGCAGAGCCAGGATCTCTGTaGTCGGGGGACATCCGCTCCCCGCCGTCACCTTGGAGTCTCGGG +
Preference number: 5 (lower is better)
Translates to: MLSTSSSLLAEPGSL*SGDIRSPPSPWSLG
Trigger: CCCGAGACTCCAAGGTGACGGCGGGGAGCGGATGTCCCCCGAGCACAGAGATCCTGGCTCTGCAAGGAGAGACGACGATGTGGAAAGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CCA 90 bp CAGCCCCCGGGGGCTCCTTTCCTGGAATGTCTGCGCTGTTCTGAGTaGTGGATGAGCTGTCCTGGGAAGTCTGCTGGCTTCCAGGCTTGG +
Preference number: 5 (lower is better)
Translates to: QPPGAPFLECLRCSE*WMSCPGKSAGFQAW
Trigger: CCAAGCCTGGAAGCCAGCAGACTTCCCAGGACAGCTCATCCACCACTCAGAACAGCGCAGACATTCCAGGAAAGGAGCCCCCGGGGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CAA 90 bp GGTGATCTGCTAGGACATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGGCCACAGGTGTGGAGTCCTaGTCACCAGCCCCCGGGGGC +
Preference number: 5 (lower is better)
Translates to: GDLLGHVSLGPSYVLRVATGVES*SPAPGG
Trigger: GCCCCCGGGGGCTGGTGACAAGGACTCCACACCTGT...GGCCACCCTCAAGACATAGGATGGGCCCAGAGAGACATGTCCTAGCAGATCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CAA 90 bp GGTGATCTGCTAGGACATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGGCCCACACAGGAGGCAGCTaGGCCCGGGCCTGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: GDLLGHVSLGPSYVLRVAHTGGS*ARAWKR
Trigger: CCTCTTCCAGGCCCGGGCCAAGCTGCCTCCTGTGTG...GGCCACCCTCAAGACATAGGATGGGCCCAGAGAGACATGTCCTAGCAGATCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS TCA 90 bp CTGGATTCCTTGGCCCCGGGTGGACCTGCTCCTCATCCACTTCGATaGCAGTCCTGTCTGCATCGATGCAGAGCCGCACCCTTCCAGCAG +
Preference number: 5 (lower is better)
Translates to: LDSLAPGGPAPHPLR*QSCLHRCRAAPFQQ
Trigger: CTGCTGGAAGGGTGCGGCTCTGCATCGATGCAGACAGGACTGTCATCGAAGTGGATGAGGAGCAGGTCCACCCGGGGCCAAGGAATCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
CDS CCA 90 bp GCAGAGCCGCACCCTTCCAGCAGGCGGGTCAGCTGTTCCCTCATCTaGTTTAAGCACCGTTGCAAGCGTGAACCCGTCCTTCTGCACCAG +
Preference number: 5 (lower is better)
Translates to: AEPHPSSRRVSCSLI*FKHRCKREPVLLHQ
Trigger: CTGGTGCAGAAGGACGGGTTCACGCTTGCAACGGTGCTTAAACCAGATGAGGGAACAGCTGACCCGCCTGCTGGAAGGGTGCGGCTCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CCA 90 bp CGTTGCCTCTCCAGCCTGGAGACCACACCCGCCTTGAGGAAAACTTaGCTGTGCCCCACGGCCACAGCTTTCTTCTCCAGATCCAGGGTC +
Preference number: 5 (lower is better)
Translates to: RCLSSLETTPALRKT*LCPTATAFFSRSRV
Trigger: GACCCTGGATCTGGAGAAGAAAGCTGTGGCCGTGGGGCACAGCCAAGTTTTCCTCAAGGCGGGTGTGGTCTCCAGGCTGGAGAGGCAACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CCA 90 bp GCTCAAGGGCATTGGTCTCCAGTTCCCAGACCCTCTCTTTCAGGCTaGCCACACCTTGATCCCCCACAGAGGCACAGCTCAGCAGCTCCC +
Preference number: 5 (lower is better)
Translates to: AQGHWSPVPRPSLSG*PHLDPPQRHSSAAP
Trigger: GGGAGCTGCTGAGCTGTGCCTCTGTGGGGGATCAAGGTGTGGCCAGCCTGAAAGAGAGGGTCTGGGAACTGGAGACCAATGCCCTTGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CCA 90 bp AGGGACAGGGAACAGCTCATCCAGGATTGCAGACTGCCCTCTGGCTaGGAGCTGATGACAGAGACGTTGTCCCCCTCTTTCCCGCTGCGG +
Preference number: 5 (lower is better)
Translates to: RDREQLIQDCRLPSG*ELMTETLSPSFPLR
Trigger: CCGCAGCGGGAAAGAGGGGGACAACGTCTCTGTCATCAGCTCCCAGCCAGAGGGCAGTCTGCAATCCTGGATGAGCTGTTCCCTGTCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CCA 90 bp GGCCAGGGACAGGGAACAGCTCATCCAGGATTGCAGACTGCCCTCTaGCTGGGAGCTGATGACAGAGACGTTGTCCCCCTCTTTCCCGCT +
Preference number: 5 (lower is better)
Translates to: GQGQGTAHPGLQTAL*LGADDRDVVPLFPA
Trigger: AGCGGGAAAGAGGGGGACAACGTCTCTGTCATCAGCTCCCAGCCAGAGGGCAGTCTGCAATCCTGGATGAGCTGTTCCCTGTCCCTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CCA 90 bp AGCACAGGGCCATCCCCCAGATGCAGAGTGGAACCCTGGCCTCTCTaGGCTCTCTTCCTGCGTAGCTCTTCCACAAACTCTGAGAGGGCC +
Preference number: 5 (lower is better)
Translates to: STGPSPRCRVEPWPL*ALFLRSSSTNSERA
Trigger: GGCCCTCTCAGAGTTTGTGGAAGAGCTACGCAGGAAGAGAGCCCAGAGAGGCCAGGGTTCCACTCTGCATCTGGGGGATGGCCCTGTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CCA 90 bp TCGCTACTGGCTCTGCCTCTCCTAAGTGAGGAAGCCCGGGTGGTCTaGAAGATGGGGAGCACAGGGCCATCCCCCAGATGCAGAGTGGAA +
Preference number: 5 (lower is better)
Translates to: SLLALPLLSEEARVV*KMGSTGPSPRCRVE
Trigger: TTCCACTCTGCATCTGGGGGATGGCCCTGTGCTCCCCATCTTCCAGACCACCCGGGCTTCCTCACTTAGGAGAGGCAGAGCCAGTAGCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CAA 90 bp CCTGGTGATCTGCTAGGACATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGGACGGGCTGGGCAGCTaGTCTCTGGACGGGGGTGAC +
Preference number: 5 (lower is better)
Translates to: PGDLLGHVSLGPSYVLRVDGLGS*SLDGGD
Trigger: GTCACCCCCGTCCAGAGACAAGCTGCCCAGCCCGTC...CACCCTCAAGACATAGGATGGGCCCAGAGAGACATGTCCTAGCAGATCACCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS TCA 90 bp GGAGCTGGGGTCTTGTCCACGGGGACATCACGAGGTTGGACCTTCTaGTCTGCCTTGGCCAACTCTGGATCCAGCTTGGCCACCATCAGC +
Preference number: 5 (lower is better)
Translates to: GAGVLSTGTSRGWTF*SALANSGSSLATIS
Trigger: GCTGATGGTGGCCAAGCTGGATCCAGAGTTGGCCAAGGCAGATCAGAAGGTCCAACCTCGTGATGTCCCCGTGGACAAGACCCCAGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS GCA 90 bp CTTAGTCTTGAGTTCCTGAACCTCTCGGAGGGCCTGAAGCCGCTCTaGCCGCTCACTCTCCAGCGCCTGGCAGGCCACATCTCCTTTGAA +
Preference number: 5 (lower is better)
Translates to: LSLEFLNLSEGLKPL*PLTLQRLAGHISFE
Trigger: TTCAAAGGAGATGTGGCCTGCCAGGCGCTGGAGAGTGAGCGGGCAGAGCGGCTTCAGGCCCTCCGAGAGGTTCAGGAACTCAAGACTAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS GCA 90 bp GTGCATGTTCTCCAGGTCCGCAGTCAGCACCTTCTGGGTCTTCAATaGGTCCTCACACTTGGCCTCGCTCTGCTCCAGCTGGCTGTGCAC +
Preference number: 5 (lower is better)
Translates to: VHVLQVRSQHLLGLQ*VLTLGLALLQLAVH
Trigger: GTGCACAGCCAGCTGGAGCAGAGCGAGGCCAAGTGTGAGGACGCATTGAAGACCCAGAAGGTGCTGACTGCGGACCTGGAGAACATGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS GCA 90 bp GCCTGCAGGTCCGCGATGCGTCGGATGGACGTCTCCAGGTCTGTCTaGAGCGTTTGTCTCACAGTTGCCAGCTCCTCCACATACTTCTCC +
Preference number: 5 (lower is better)
Translates to: ACRSAMRRMDVSRSV*SVCLTVASSSTYFS
Trigger: GGAGAAGTATGTGGAGGAGCTGGCAACTGTGAGACAAACGCTGCAGACAGACCTGGAGACGTCCATCCGACGCATCGCGGACCTGCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS GCA 90 bp CTCACTGAGTCCGTGGCCAGGGACAGGGAACAGCTCATCCAGGATTaGAGACTGCCCTCTGGCTGGGAGCTGATGACAGAGACGTTGTCC +
Preference number: 5 (lower is better)
Translates to: LTESVARDREQLIQD*RLPSGWELMTETLS
Trigger: GGACAACGTCTCTGTCATCAGCTCCCAGCCAGAGGGCAGTCTGCAATCCTGGATGAGCTGTTCCCTGTCCCTGGCCACGGACTCAGTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CCA 90 bp GGGGACATCACGAGGTTGGACCTTCTGATCTGCCTTGGCCAACTCTaGATCCAGCTTGGCCACCATCAGCAGCACATCGCCCCTCCTCAC +
Preference number: 5 (lower is better)
Translates to: GDITRLDLLICLGQL*IQLGHHQQHIAPPH
Trigger: GTGAGGAGGGGCGATGTGCTGCTGATGGTGGCCAAGCTGGATCCAGAGTTGGCCAAGGCAGATCAGAAGGTCCAACCTCGTGATGTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CCA 90 bp ACACCACCTCTTCCAAGGCTGCCTGCAGGTCCGCGATGCGTCGGATaGACGTCTCCAGGTCTGTCTGCAGCGTTTGTCTCACAGTTGCCA +
Preference number: 5 (lower is better)
Translates to: TPPLPRLPAGPRCVG*TSPGLSAAFVSQLP
Trigger: TGGCAACTGTGAGACAAACGCTGCAGACAGACCTGGAGACGTCCATCCGACGCATCGCGGACCTGCAGGCAGCCTTGGAAGAGGTGGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CCA 90 bp GGAAGACTGGGTGGAGAGAGGCAGAACCGGCCTTCGAGGCATCTCTaGCAGCATCCCAGGCTCCGCTCAAAGCCGAAGATGCTGTTCTCA +
Preference number: 5 (lower is better)
Translates to: GRLGGERQNRPSRHL*QHPRLRSKPKMLFS
Trigger: TGAGAACAGCATCTTCGGCTTTGAGCGGAGCCTGGGATGCTGCCAGAGATGCCTCGAAGGCCGGTTCTGCCTCTCTCCACCCAGTCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CAA 90 bp CCTGGTGATCTGCTAGGACATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGTCCTGCCTCCTGAGCTaGGGACCTGGTCCCCTGCTC +
Preference number: 5 (lower is better)
Translates to: PGDLLGHVSLGPSYVLRVSCLLS*GPGPLL
Trigger: GAGCAGGGGACCAGGTCCCAAGCTCAGGAGGCAGGA...CACCCTCAAGACATAGGATGGGCCCAGAGAGACATGTCCTAGCAGATCACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CAA 90 bp GGTGATCTGCTAGGACATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGGCCCGCCTTGAGGAAAACTaGGCTGTGCCCCACGGCCAC +
Preference number: 5 (lower is better)
Translates to: GDLLGHVSLGPSYVLRVARLEEN*AVPHGH
Trigger: GTGGCCGTGGGGCACAGCCAAGTTTTCCTCAAGGCG...GGCCACCCTCAAGACATAGGATGGGCCCAGAGAGACATGTCCTAGCAGATCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS GCA 90 bp TGGGGTCTTGTCCACGGGGACATCACGAGGTTGGACCTTCTGATCTaGCTTGGCCAACTCTGGATCCAGCTTGGCCACCATCAGCAGCAC +
Preference number: 5 (lower is better)
Translates to: WGLVHGDITRLDLLI*LGQLWIQLGHHQQH
Trigger: GTGCTGCTGATGGTGGCCAAGCTGGATCCAGAGTTGGCCAAGGCAGATCAGAAGGTCCAACCTCGTGATGTCCCCGTGGACAAGACCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS GCA 90 bp CTCTCCAGCCTGGAGACCACACCCGCCTTGAGGAAAACTTGGCTGTaGCCCACGGCCACAGCTTTCTTCTCCAGATCCAGGGTCTTCAAG +
Preference number: 5 (lower is better)
Translates to: LSSLETTPALRKTWL*PTATAFFSRSRVFK
Trigger: CTTGAAGACCCTGGATCTGGAGAAGAAAGCTGTGGCCGTGGGGCACAGCCAAGTTTTCCTCAAGGCGGGTGTGGTCTCCAGGCTGGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS GCA 90 bp CTGGAGGTACTTCCTCATTATGCTTTCCACATCGTCGTCTCTCCTTaGAGAGCCAGGATCTCTGTGCTCGGGGGACATCCGCTCCCCGCC +
Preference number: 5 (lower is better)
Translates to: LEVLPHYAFHIVVSP*RARISVLGGHPLPA
Trigger: GGCGGGGAGCGGATGTCCCCCGAGCACAGAGATCCTGGCTCTGCAAGGAGAGACGACGATGTGGAAAGCATAATGAGGAAGTACCTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CAA 90 bp TCAGCCCCAGCCTCCTTCTTCTTCTCAAAGGCTGCACGCAGACGCTCAAGTACATCTCCTCTGGATTCCTaGGCCCCGGGTGGACCTGCT +
Preference number: 5 (lower is better)
Translates to: SAPASFFFSKAARRRSSTSPLDS*APGGPA
Trigger: AGCAGGTCCACCCGGGGCCAAGGAATCCAGAGGAGA...TGTACTTGAGCGTCTGCGTGCAGCCTTTGAGAAGAAGAAGGAGGCTGGGGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
CDS TCA 90 bp TCTGCTGGTTCTCTAGCAGCACCCGCGTGTCCTCCAGGTCCCAAGTaGGGTGGTGACACTTCCTCTTCAGCTGGTGAGCCATCTTCTTGG +
Preference number: 5 (lower is better)
Translates to: SAGSLAAPACPPGPK*GGDTSSSAGEPSSW
Trigger: CCAAGAAGATGGCTCACCAGCTGAAGAGGAAGTGTCACCACCTCACTTGGGACCTGGAGGACACGCGGGTGCTGCTAGAGAACCAGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS TCA 90 bp CCAGCTCCCAGCGGACTCCATTGTTCTCCTGACTCACTTTCTCCCTaGGGCTCTTCTCAAACATTGACTCCCCCAGTGCCTGGGCCAGCT +
Preference number: 5 (lower is better)
Translates to: PAPSGLHCSPDSLSP*GSSQTLTPPVPGPA
Trigger: AGCTGGCCCAGGCACTGGGGGAGTCAATGTTTGAGAAGAGCCTCAGGGAGAAAGTGAGTCAGGAGAACAATGGAGTCCGCTGGGAGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS GCA 90 bp GCTGCTTGGAAGAGAACGATATTCCGGGACACCAGCTTCTCCCGTTaGCTCTCCAGCCTGGAGACCACACCCGCCTTGAGGAAAACTTGG +
Preference number: 5 (lower is better)
Translates to: AAWKRTIFRDTSFSR*LSSLETTPALRKTW
Trigger: CCAAGTTTTCCTCAAGGCGGGTGTGGTCTCCAGGCTGGAGAGGCAACGGGAGAAGCTGGTGTCCCGGAATATCGTTCTCTTCCAAGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS GCA 90 bp TCGGATGGACGTCTCCAGGTCTGTCTGCAGCGTTTGTCTCACAGTTaGCAGCTCCTCCACATACTTCTCCAGTTCCATGCAGCGCCGGCT +
Preference number: 5 (lower is better)
Translates to: SDGRLQVCLQRLSHS*QLLHILLQFHAAPA
Trigger: AGCCGGCGCTGCATGGAACTGGAGAAGTATGTGGAGGAGCTGGCAACTGTGAGACAAACGCTGCAGACAGACCTGGAGACGTCCATCCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS GCA 90 bp TATCACTTGACACCACCTCTTCCAAGGCTGCCTGCAGGTCCGCGATaGGTCGGATGGACGTCTCCAGGTCTGTCTGCAGCGTTTGTCTCA +
Preference number: 5 (lower is better)
Translates to: YHLTPPLPRLPAGPR*VGWTSPGLSAAFVS
Trigger: TGAGACAAACGCTGCAGACAGACCTGGAGACGTCCATCCGACGCATCGCGGACCTGCAGGCAGCCTTGGAAGAGGTGGTGTCAAGTGATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS GCA 90 bp CTTTCTGTGTCACTATCACTTGACACCACCTCTTCCAAGGCTGCCTaGAGGTCCGCGATGCGTCGGATGGACGTCTCCAGGTCTGTCTGC +
Preference number: 5 (lower is better)
Translates to: LSVSLSLDTTSSKAA*RSAMRRMDVSRSVC
Trigger: GCAGACAGACCTGGAGACGTCCATCCGACGCATCGCGGACCTGCAGGCAGCCTTGGAAGAGGTGGTGTCAAGTGATAGTGACACAGAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CCA 90 bp TCTTGTCCACGGGGACATCACGAGGTTGGACCTTCTGATCTGCCTTaGCCAACTCTGGATCCAGCTTGGCCACCATCAGCAGCACATCGC +
Preference number: 5 (lower is better)
Translates to: SCPRGHHEVGPSDLP*PTLDPAWPPSAAHR
Trigger: GCGATGTGCTGCTGATGGTGGCCAAGCTGGATCCAGAGTTGGCCAAGGCAGATCAGAAGGTCCAACCTCGTGATGTCCCCGTGGACAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CCA 90 bp TCCAGTTCACTGTGCATGTTCTCCAGGTCCGCAGTCAGCACCTTCTaGGTCTTCAATGCGTCCTCACACTTGGCCTCGCTCTGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: SSSLCMFSRSAVSTF*VFNASSHLASLCSS
Trigger: GCTGGAGCAGAGCGAGGCCAAGTGTGAGGACGCATTGAAGACCCAGAAGGTGCTGACTGCGGACCTGGAGAACATGCACAGTGAACTGGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CCA 90 bp ATCCCCGAGAGAAAGGAGCGGTCGGCAGCCTCTCCCATCTCAAAGTaGACTCCAGGATGCTTCGAAGCCTCCTTCCCATCTTTGGCAGCT +
Preference number: 5 (lower is better)
Translates to: IPERKERSAASPISK*TPGCFEASFPSLAA
Trigger: AGCTGCCAAAGATGGGAAGGAGGCTTCGAAGCATCCTGGAGTCCACTTTGAGATGGGAGAGGCTGCCGACCGCTCCTTTCTCTCGGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CAA 90 bp AGCAGGCCCCAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGCTGGCCGTCCCTCTTaGCAGCCTCTGCTGATATCC +
Preference number: 5 (lower is better)
Translates to: SRPQEPGLSLSLSLSFSPAGRPS*QPLLIS
Trigger: GGATATCAGCAGAGGCTGCAAAGAGGGACGGCCAGC...TGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTGGGGCCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CAA 90 bp GGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGGTGGCCGCCCGGTCCTaGCCCTGGTGCCTAGGATTT +
Preference number: 5 (lower is better)
Translates to: GAWSLSLSLSFFLSSALEVAARS*PWCLGF
Trigger: AAATCCTAGGCACCAGGGCAAGGACCGGGCGGCCAC...CTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CAA 90 bp GGTGATCTGCTAGGACATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGGCCACAGCTCATCCAGGATaGCAGACTGCCCTCTGGCTG +
Preference number: 5 (lower is better)
Translates to: GDLLGHVSLGPSYVLRVATAHPG*QTALWL
Trigger: CAGCCAGAGGGCAGTCTGCAATCCTGGATGAGCTGT...GGCCACCCTCAAGACATAGGATGGGCCCAGAGAGACATGTCCTAGCAGATCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS TCA 90 bp TGGCCAGAAGGAGCTGAACATCAGACAACAGAGCGTGTGTCCTCCTaGGGTCTCTGCGGAGACGCTTTTCTACGTCAAAGTCCCGGTGGC +
Preference number: 5 (lower is better)
Translates to: WPEGAEHQTTERVSS*GLCGDAFLRQSPGG
Trigger: GCCACCGGGACTTTGACGTAGAAAAGCGTCTCCGCAGAGACCTCAGGAGGACACACGCTCTGTTGTCTGATGTTCAGCTCCTTCTGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CCA 90 bp CGTGGTCACCCCTTTCTTTGTCCCTCCAGAATCTTTGGCTGGAGCTaGGGTCTTGTCCACGGGGACATCACGAGGTTGGACCTTCTGATC +
Preference number: 5 (lower is better)
Translates to: RGHPFLCPSRIFGWS*GLVHGDITRLDLLI
Trigger: GATCAGAAGGTCCAACCTCGTGATGTCCCCGTGGACAAGACCCCAGCTCCAGCCAAAGATTCTGGAGGGACAAAGAAAGGGGTGACCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CCA 90 bp CTGTTCCCAGTTGCTCCTTGTTTCCTGCCTCCTGAGCTTGGGACCTaGTCCCCTGCTCCTCTGTGCTCTGAGACTCACCTTCTTTTTGCC +
Preference number: 5 (lower is better)
Translates to: LFPVAPCFLPPELGT*SPAPLCSETHLLFA
Trigger: GGCAAAAAGAAGGTGAGTCTCAGAGCACAGAGGAGCAGGGGACCAGGTCCCAAGCTCAGGAGGCAGGAAACAAGGAGCAACTGGGAACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CAA 90 bp AGCAGGCCCCAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCATCTCGAACCAGCTGCTaGATGAAGCCCCCAGGGATG +
Preference number: 5 (lower is better)
Translates to: SRPQEPGLSLSLSLSFSPSRTSC*MKPPGM
Trigger: CATCCCTGGGGGCTTCATCAAGCAGCTGGTTCGAGA...TGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTGGGGCCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CAA 90 bp GGTGATCTGCTAGGACATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGGCCTGCTGGCTTCCAGGCTaGGGGACATTGTTGGTCTTG +
Preference number: 5 (lower is better)
Translates to: GDLLGHVSLGPSYVLRVACWLPG*GTLLVL
Trigger: CAAGACCAACAATGTCCCCAAGCCTGGAAGCCAGCA...GGCCACCCTCAAGACATAGGATGGGCCCAGAGAGACATGTCCTAGCAGATCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CAA 90 bp CCTGGTGATCTGCTAGGACATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGGTCCTTTGCCCAGCCTaGCTTTCCACTGTGGTTGGC +
Preference number: 5 (lower is better)
Translates to: PGDLLGHVSLGPSYVLRVVLCPA*LSTVVG
Trigger: GCCAACCACAGTGGAAAGCAAGGCTGGGCAAAGGAC...CACCCTCAAGACATAGGATGGGCCCAGAGAGACATGTCCTAGCAGATCACCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CAA 90 bp CATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGGCCATGTGTTCTGGCTCTAGAGCTGTGGGTTCGTaGGCTACACCTTGGTCCCCA +
Preference number: 5 (lower is better)
Translates to: HVSLGPSYVLRVAMCSGSRAVGS*ATPWSP
Trigger: TGGGGACCAAGGTGTAGCCAACGAACCCACAGCTCT...AGAGCCAGAACACATGGCCACCCTCAAGACATAGGATGGGCCCAGAGAGACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CAA 90 bp CCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGGGCTTCTCCTCCAGGTaGGCCCCCTGGATCCTCTGC +
Preference number: 5 (lower is better)
Translates to: PGLSLSLSLSFSPVLWSRGFSSR*APWILC
Trigger: GCAGAGGATCCAGGGGGCCAACCTGGAGGAGAAGCC...CCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS GCA 90 bp CTCCTCCTGGCTTCTTTGGACTCTTTCTCTGTCTCTCGAACCAGCTaGTTGATGAAGCCCCCAGGGATGACAGAGAACAAGGGAGGCGGA +
Preference number: 5 (lower is better)
Translates to: LLLASLDSFSVSRTS*LMKPPGMTENKGGG
Trigger: TCCGCCTCCCTTGTTCTCTGTCATCCCTGGGGGCTTCATCAAGCAGCTGGTTCGAGAGACAGAGAAAGAGTCCAAAGAAGCCAGGAGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS GCA 90 bp GTGGGTTCTGCTAGCTGCCCACAGCTCCTGTCTACCGCTGGGCTTTaGAAGTCGCCGGTCTTCTCATCCTTACGATGTGACTCTGTTACT +
Preference number: 5 (lower is better)
Translates to: VGSASCPQLLSTAGL*KSPVFSSLRCDSVT
Trigger: AGTAACAGAGTCACATCGTAAGGATGAGAAGACCGGCGACTTGCAAAGCCCAGCGGTAGACAGGAGCTGTGGGCAGCTAGCAGAACCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS GCA 90 bp CGTTGCAAGCGTGAACCCGTCCTTCTGCACCAGCCAGACTTTCTGTaGCTCGTACCATCTATCCTCATAAGCCTGGTCCGAGTCTCCACT +
Preference number: 5 (lower is better)
Translates to: RCKREPVLLHQPDFL*LVPSILISLVRVST
Trigger: AGTGGAGACTCGGACCAGGCTTATGAGGATAGATGGTACGAGGCACAGAAAGTCTGGCTGGTGCAGAAGGACGGGTTCACGCTTGCAACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS GCA 90 bp ATCTTCTTGGCCTCTTCATACGCACTCTGCAGCTCCCCAAGCTTCTaGTCCAGCTCTGTCCGGGCCTTCATCTCTGAGTCCAATCTCTCC +
Preference number: 5 (lower is better)
Translates to: IFLASSYALCSSPSF*SSSVRAFISESNLS
Trigger: GGAGAGATTGGACTCAGAGATGAAGGCCCGGACAGAGCTGGAGCAGAAGCTTGGGGAGCTGCAGAGTGCGTATGAAGAGGCCAAGAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS GCA 90 bp CGAGGCATCTCTGGCAGCATCCCAGGCTCCGCTCAAAGCCGAAGATaGTGTTCTCAGCCTCTCAGAATCTCCAGCTTCTTCACTTACCCT +
Preference number: 5 (lower is better)
Translates to: RGISGSIPGSAQSRR*CSQPLRISSFFTYP
Trigger: AGGGTAAGTGAAGAAGCTGGAGATTCTGAGAGGCTGAGAACAGCATCTTCGGCTTTGAGCGGAGCCTGGGATGCTGCCAGAGATGCCTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CCA 90 bp TTGTCCCCCTCTTTCCCGCTGCGGCTGCTACAGTCCACTGCCGTCTaGACACTTTCTGTGTCACTATCACTTGACACCACCTCTTCCAAG +
Preference number: 5 (lower is better)
Translates to: LSPSFPLRLLQSTAV*TLSVSLSLDTTSSK
Trigger: CTTGGAAGAGGTGGTGTCAAGTGATAGTGACACAGAAAGTGTCCAGACGGCAGTGGACTGTAGCAGCCGCAGCGGGAAAGAGGGGGACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CCA 90 bp AGGGGTTGGCCTAAAGAACTCACAAAGGATCTCCTCTGGATTCCTTaGCCCCGGGTGGACCTGCTCCTCATCCACTTCGATGACAGTCCT +
Preference number: 5 (lower is better)
Translates to: RGWPKELTKDLLWIP*PRVDLLLIHFDDSP
Trigger: AGGACTGTCATCGAAGTGGATGAGGAGCAGGTCCACCCGGGGCCAAGGAATCCAGAGGAGATCCTTTGTGAGTTCTTTAGGCCAACCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
CDS-3UTR CAA 90 bp GGTGATCTGCTAGGACATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGGCCCCAGGCTTGGGGACATaGTTGGTCTTGTTGGTTTGG +
Preference number: 5 (lower is better)
Translates to: GDLLGHVSLGPSYVLRVAPGLGT*LVLLVW
Trigger: CCAAACCAACAAGACCAACAATGTCCCCAAGCCTGG...GGCCACCCTCAAGACATAGGATGGGCCCAGAGAGACATGTCCTAGCAGATCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CAA 90 bp AGCAGGCCCCAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCACCCACCCTTTGTGCTTaGGCCTGTATCTCCAACTCC +
Preference number: 5 (lower is better)
Translates to: SRPQEPGLSLSLSLSFSPPTLCA*ACISNS
Trigger: GGAGTTGGAGATACAGGCCAAAGCACAAAGGGTGGG...TGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTGGGGCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CAA 90 bp AGCAGGCCCCAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCACTCTGCTGTTCCCAGTaGCTCCTTGTTTCCTGCCTC +
Preference number: 5 (lower is better)
Translates to: SRPQEPGLSLSLSLSFSPLCCSQ*LLVSCL
Trigger: GAGGCAGGAAACAAGGAGCAACTGGGAACAGCAGAG...TGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTGGGGCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CAA 90 bp AGCAGGCCCCAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCATCAGCCCCTGCAACCTaGGGCTCATCCTCTTTTTCC +
Preference number: 5 (lower is better)
Translates to: SRPQEPGLSLSLSLSFSPSAPAT*GSSSFS
Trigger: GGAAAAAGAGGATGAGCCCAAGGTTGCAGGGGCTGA...TGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTGGGGCCTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CAA 90 bp CAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGTGCTTGTCTTCAGGCTaGGACCACAGGCCCATGCCG +
Preference number: 5 (lower is better)
Translates to: QEPGLSLSLSLSFSPVLWCLSSG*DHRPMP
Trigger: CGGCATGGGCCTGTGGTCCAAGCCTGAAGACAAGCA...CCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CAA 90 bp CATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGGCCATGTGTTCTGGCTCTAGCCACGAAGAGTTCTaGGTACAGGCCAGAGGCCAT +
Preference number: 5 (lower is better)
Translates to: HVSLGPSYVLRVAMCSGSSHEEF*VQARGH
Trigger: ATGGCCTCTGGCCTGTACCAAGAACTCTTCGTGGCT...AGAGCCAGAACACATGGCCACCCTCAAGACATAGGATGGGCCCAGAGAGACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CAA 90 bp CATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGGCCATGTGTTCTGGCTCTGCAGCTCCTCCCTCTTaGACTGCTGCAGGATTTGAG +
Preference number: 5 (lower is better)
Translates to: HVSLGPSYVLRVAMCSGSAAPPS*TAAGFE
Trigger: CTCAAATCCTGCAGCAGTCAAAGAGGGAGGAGCTGC...AGAGCCAGAACACATGGCCACCCTCAAGACATAGGATGGGCCCAGAGAGACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CAA 90 bp GGTGATCTGCTAGGACATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGGCCGCGTTTGTCTCACAGTaGCCAGCTCCTCCACATACT +
Preference number: 5 (lower is better)
Translates to: GDLLGHVSLGPSYVLRVAAFVSQ*PAPPHT
Trigger: AGTATGTGGAGGAGCTGGCAACTGTGAGACAAACGC...GGCCACCCTCAAGACATAGGATGGGCCCAGAGAGACATGTCCTAGCAGATCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CAA 90 bp CATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGGCCATGTGTTCTGGCTCTCATCGTCGTCTCTCCTaGCAGAGCCAGGATCTCTGT +
Preference number: 5 (lower is better)
Translates to: HVSLGPSYVLRVAMCSGSHRRLS*QSQDLC
Trigger: ACAGAGATCCTGGCTCTGCAAGGAGAGACGACGATG...AGAGCCAGAACACATGGCCACCCTCAAGACATAGGATGGGCCCAGAGAGACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CCA 90 bp TCAAACTTCTTCTGTCTCTTCTCCAGCTCATGGTTCCTACTCTGCTaGTTCTCTAGCAGCACCCGCGTGTCCTCCAGGTCCCAAGTGAGG +
Preference number: 5 (lower is better)
Translates to: SNFFCLFSSSWFLLC*FSSSTRVSSRSQVR
Trigger: CCTCACTTGGGACCTGGAGGACACGCGGGTGCTGCTAGAGAACCAGCAGAGTAGGAACCATGAGCTGGAGAAGAGACAGAAGAAGTTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CCA 90 bp AACCGCTGGCGAAGCTGCTCCAGCTGCTTGATGGTATTTTCCTGCTaGCTGTGGATCTTCTGTTGCTCAAGGGCATTGGTCTCCAGTTCC +
Preference number: 5 (lower is better)
Translates to: NRWRSCSSCLMVFSC*LWIFCCSRALVSSS
Trigger: GGAACTGGAGACCAATGCCCTTGAGCAACAGAAGATCCACAGCCAGCAGGAAAATACCATCAAGCAGCTGGAGCAGCTTCGCCAGCGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CCA 90 bp CTAAAGAACTCACAAAGGATCTCCTCTGGATTCCTTGGCCCCGGGTaGACCTGCTCCTCATCCACTTCGATGACAGTCCTGTCTGCATCG +
Preference number: 5 (lower is better)
Translates to: LKNSQRISSGFLGPG*TCSSSTSMTVLSAS
Trigger: CGATGCAGACAGGACTGTCATCGAAGTGGATGAGGAGCAGGTCCACCCGGGGCCAAGGAATCCAGAGGAGATCCTTTGTGAGTTCTTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
CDS-3UTR CAA 90 bp CAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGCTCCTCACGCCCCTCTaGAAGGGCAGTGTCCTTTTG +
Preference number: 5 (lower is better)
Translates to: QEPGLSLSLSLSFSPVLWLLTPL*KGSVLL
Trigger: CAAAAGGACACTGCCCTTCAAGAGGGGCGTGAGGAG...CCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CAA 90 bp CAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGGTCCCTCCAGAATCTTaGGCTGGAGCTGGGGTCTTG +
Preference number: 5 (lower is better)
Translates to: QEPGLSLSLSLSFSPVLWVPPES*AGAGVL
Trigger: CAAGACCCCAGCTCCAGCCAAAGATTCTGGAGGGAC...CCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CAA 90 bp TGGATAGCAGGCCCCAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTATCCTATCCGGGGCCTaGCAGCTTTCCTCAGGATTC +
Preference number: 5 (lower is better)
Translates to: WIAGPRSLVSLSLSLFLSILSGA*QLSSGF
Trigger: GAATCCTGAGGAAAGCTGCAAGGCCCCGGATAGGAT...AGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTGGGGCCTGCTATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CAA 90 bp CCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGGTCAGCTCCTCCTCCTaGGCTCGAAGCTGCTCAGTG +
Preference number: 5 (lower is better)
Translates to: PGLSLSLSLSFSPVLWSRVSSSS*ARSCSV
Trigger: CACTGAGCAGCTTCGAGCCAAGGAGGAGGAGCTGAC...CCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CAA 90 bp CAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGGGCTCTTCTCAAACATaGACTCCCCCAGTGCCTGGG +
Preference number: 5 (lower is better)
Translates to: QEPGLSLSLSLSFSPVLWGSSQT*TPPVPG
Trigger: CCCAGGCACTGGGGGAGTCAATGTTTGAGAAGAGCC...CCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CAA 90 bp CCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGAATGCGTCCTCACACTaGGCCTCGCTCTGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: PGLSLSLSLSFSPVLWSRNASSH*ASLCSS
Trigger: GCTGGAGCAGAGCGAGGCCAAGTGTGAGGACGCATT...CCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CAA 90 bp AGCAGGCCCCAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCACTGCAACCTGTACAGTaGCTCATCCACCAGGCTCTT +
Preference number: 5 (lower is better)
Translates to: SRPQEPGLSLSLSLSFSPLQPVQ*LIHQAL
Trigger: AAGAGCCTGGTGGATGAGCAACTGTACAGGTTGCAG...TGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTGGGGCCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS TCA 90 bp CGCCTGGCAGGCCACATCTCCTTTGAAGCGTTCATCAGCAAGCTCTaGGGTCAAGTCTGTGATCTTGCTCTCCAGCAAGTCTGTGTTCTG +
Preference number: 5 (lower is better)
Translates to: RLAGHISFEAFISKL*GQVCDLALQQVCVL
Trigger: CAGAACACAGACTTGCTGGAGAGCAAGATCACAGACTTGACCTCAGAGCTTGCTGATGAACGCTTCAAAGGAGATGTGGCCTGCCAGGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS TCA 90 bp TTGCTGATTGACGTCTTGCTGTCTTCAATGGTGGCCAGAAGGAGCTaGACATCAGACAACAGAGCGTGTGTCCTCCTGAGGTCTCTGCGG +
Preference number: 5 (lower is better)
Translates to: LLIDVLLSSMVARRS*TSDNRACVLLRSLR
Trigger: CCGCAGAGACCTCAGGAGGACACACGCTCTGTTGTCTGATGTTCAGCTCCTTCTGGCCACCATTGAAGACAGCAAGACGTCAATCAGCAA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS GCA 90 bp TCAAACCGCTGGCGAAGCTGCTCCAGCTGCTTGATGGTATTTTCCTaGTGGCTGTGGATCTTCTGTTGCTCAAGGGCATTGGTCTCCAGT +
Preference number: 5 (lower is better)
Translates to: SNRWRSCSSCLMVFS*WLWIFCCSRALVSS
Trigger: ACTGGAGACCAATGCCCTTGAGCAACAGAAGATCCACAGCCAGCAGGAAAATACCATCAAGCAGCTGGAGCAGCTTCGCCAGCGGTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS GCA 90 bp TCATCCACCAGGCTCTTGCTCCGGGTCACATTTTCCAGTTCACTGTaGATGTTCTCCAGGTCCGCAGTCAGCACCTTCTGGGTCTTCAAT +
Preference number: 5 (lower is better)
Translates to: SSTRLLLRVTFSSSL*MFSRSAVSTFWVFN
Trigger: ATTGAAGACCCAGAAGGTGCTGACTGCGGACCTGGAGAACATGCACAGTGAACTGGAAAATGTGACCCGGAGCAAGAGCCTGGTGGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS GCA 90 bp GTCATTCAGGTCACCCTGGTCCTCATCAATGCGCTTCAGGAGGTCTaGTCTCTCAAACTGCAACCTGTACAGTTGCTCATCCACCAGGCT +
Preference number: 5 (lower is better)
Translates to: VIQVTLVLINALQEV*SLKLQPVQLLIHQA
Trigger: AGCCTGGTGGATGAGCAACTGTACAGGTTGCAGTTTGAGAGAGCAGACCTCCTGAAGCGCATTGATGAGGACCAGGGTGACCTGAATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS GCA 90 bp TGCCCGATGTCAGCAGCTGACTGTGCAATGAGGTCTTTGTGCTTCTaGATGAGGTCATTCAGGTCACCCTGGTCCTCATCAATGCGCTTC +
Preference number: 5 (lower is better)
Translates to: CPMSAADCAMRSLCF*MRSFRSPWSSSMRF
Trigger: GAAGCGCATTGATGAGGACCAGGGTGACCTGAATGACCTCATGCAGAAGCACAAAGACCTCATTGCACAGTCAGCTGCTGACATCGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CCA 90 bp GGTCTTGTTGGTTTGGTTAGTTGGAACTGCTGGGATCTCTACTTCTaGGGCTGTGAATGCTGCCGCCTTCCTCCTCCTGGCTTCTTTGGA +
Preference number: 5 (lower is better)
Translates to: GLVGLVSWNCWDLYF*GCECCRLPPPGFFG
Trigger: TCCAAAGAAGCCAGGAGGAGGAAGGCGGCAGCATTCACAGCCCCAGAAGTAGAGATCCCAGCAGTTCCAACTAACCAAACCAACAAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CCA 90 bp AGCTTCTTATATTCCTGGCGAGACAGAAAGCCCCTACAGGCTGCTTaGAAGAGAACGATATTCCGGGACACCAGCTTCTCCCGTTGCCTC +
Preference number: 5 (lower is better)
Translates to: SFLYSWRDRKPLQAA*KRTIFRDTSFSRCL
Trigger: GAGGCAACGGGAGAAGCTGGTGTCCCGGAATATCGTTCTCTTCCAAGCAGCCTGTAGGGGCTTTCTGTCTCGCCAGGAATATAAGAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CCA 90 bp TCTCAAAGTGGACTCCAGGATGCTTCGAAGCCTCCTTCCCATCTTTaGCAGCTCCGGATGAAGGAGTATCACTCTTCCTTATGGCCGGGA +
Preference number: 5 (lower is better)
Translates to: SQSGLQDASKPPSHL*QLRMKEYHSSLWPG
Trigger: TCCCGGCCATAAGGAAGAGTGATACTCCTTCATCCGGAGCTGCCAAAGATGGGAAGGAGGCTTCGAAGCATCCTGGAGTCCACTTTGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CAA 90 bp GGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGAGACTCACCTTCTTTTaGCCCGATGGTCTGGGGGTC +
Preference number: 5 (lower is better)
Translates to: GAWSLSLSLSFFLSSALERLTFF*PDGLGV
Trigger: GACCCCCAGACCATCGGGCAAAAAGAAGGTGAGTCT...CTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CAA 90 bp TCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGGAGTCTCTGGCTTCAGCAGCGTGGTaGGCCCACTCAAACCGCATG +
Preference number: 5 (lower is better)
Translates to: SLSLSLSFSPVLWSRESLASAAW*AHSNRM
Trigger: CATGCGGTTTGAGTGGGCCAACCACGCTGCTGAAGC...CAGAGACTCCCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CAA 90 bp CAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGGAGGAGAAGGATCTGTaGATGAGGGAGACCACAGCC +
Preference number: 5 (lower is better)
Translates to: QEPGLSLSLSLSFSPVLWEEKDL*MRETTA
Trigger: GGCTGTGGTCTCCCTCATCAACAGATCCTTCTCCTC...CCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CAA 90 bp GGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGGCATCCATCTGCAGCTaGATTTGGGCACAAGGAGCC +
Preference number: 5 (lower is better)
Translates to: GAWSLSLSLSFFLSSALEASICS*IWAQGA
Trigger: GGCTCCTTGTGCCCAAATCAAGCTGCAGATGGATGC...CTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CAA 90 bp GGTGATCTGCTAGGACATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGGCCTTCTGGAATTCGGTCTaGTTCTCCAGGTCACAGATG +
Preference number: 5 (lower is better)
Translates to: GDLLGHVSLGPSYVLRVAFWNSV*FSRSQM
Trigger: CATCTGTGACCTGGAGAACAAGACCGAATTCCAGAA...GGCCACCCTCAAGACATAGGATGGGCCCAGAGAGACATGTCCTAGCAGATCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CAA 90 bp CATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGGCCATGTGTTCTGGCTCTCTGTGTCACTATCACTaGACACCACCTCTTCCAAGG +
Preference number: 5 (lower is better)
Translates to: HVSLGPSYVLRVAMCSGSLCHYH*TPPLPR
Trigger: CCTTGGAAGAGGTGGTGTCAAGTGATAGTGACACAG...AGAGCCAGAACACATGGCCACCCTCAAGACATAGGATGGGCCCAGAGAGACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CAA 90 bp CCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGGCCTCCTTCCCATCTTaGGCAGCTCCGGATGAAGGA +
Preference number: 5 (lower is better)
Translates to: PGLSLSLSLSFSPVLWSRASFPS*AAPDEG
Trigger: TCCTTCATCCGGAGCTGCCAAAGATGGGAAGGAGGC...CCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CAA 90 bp CAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGGTGCCGCCTGTACTTTaGAAGGACACGATGGAGCTG +
Preference number: 5 (lower is better)
Translates to: QEPGLSLSLSLSFSPVLWVPPVL*KDTMEL
Trigger: CAGCTCCATCGTGTCCTTCAAAAGTACAGGCGGCAC...CCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS GCA 90 bp CTTCAGCTTCTTATATTCCTGGCGAGACAGAAAGCCCCTACAGGCTaGTTGGAAGAGAACGATATTCCGGGACACCAGCTTCTCCCGTTG +
Preference number: 5 (lower is better)
Translates to: LQLLIFLARQKAPTG*LEENDIPGHQLLPL
Trigger: CAACGGGAGAAGCTGGTGTCCCGGAATATCGTTCTCTTCCAAGCAGCCTGTAGGGGCTTTCTGTCTCGCCAGGAATATAAGAAGCTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS GCA 90 bp ATGCGCTTCAGGAGGTCTGCTCTCTCAAACTGCAACCTGTACAGTTaGTCATCCACCAGGCTCTTGCTCCGGGTCACATTTTCCAGTTCA +
Preference number: 5 (lower is better)
Translates to: MRFRRSALSNCNLYS*SSTRLLLRVTFSSS
Trigger: TGAACTGGAAAATGTGACCCGGAGCAAGAGCCTGGTGGATGAGCAACTGTACAGGTTGCAGTTTGAGAGAGCAGACCTCCTGAAGCGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CCA 90 bp GCAATGAGGTCTTTGTGCTTCTGCATGAGGTCATTCAGGTCACCCTaGTCCTCATCAATGCGCTTCAGGAGGTCTGCTCTCTCAAACTGC +
Preference number: 5 (lower is better)
Translates to: AMRSLCFCMRSFRSP*SSSMRFRRSALSNC
Trigger: GCAGTTTGAGAGAGCAGACCTCCTGAAGCGCATTGATGAGGACCAGGGTGACCTGAATGACCTCATGCAGAAGCACAAAGACCTCATTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CCA 90 bp TCCCATCTTTGGCAGCTCCGGATGAAGGAGTATCACTCTTCCTTATaGCCGGGAGGAAGTCATCAAAGTCCACTTTGGTCTGGCGTCTGT +
Preference number: 5 (lower is better)
Translates to: SHLWQLRMKEYHSSL*PGGSHQSPLWSGVC
Trigger: ACAGACGCCAGACCAAAGTGGACTTTGATGACTTCCTCCCGGCCATAAGGAAGAGTGATACTCCTTCATCCGGAGCTGCCAAAGATGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CAA 90 bp CCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGAACTCTGGATCCAGCTaGGCCACCATCAGCAGCACA +
Preference number: 5 (lower is better)
Translates to: PGLSLSLSLSFSPVLWSRNSGSS*ATISST
Trigger: TGTGCTGCTGATGGTGGCCAAGCTGGATCCAGAGTT...CCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CAA 90 bp GGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGGCTCTCGGGGTTTCCTaGGTGTCACCAGCTTTTTCT +
Preference number: 5 (lower is better)
Translates to: GAWSLSLSLSFFLSSALEALGVS*VSPAFS
Trigger: AGAAAAAGCTGGTGACACCAAGGAAACCCCGAGAGC...CTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CAA 90 bp AGCAGGCCCCAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGGAATGCCTTCCTCTTaGTATCTCTCCAGAGTAGAG +
Preference number: 5 (lower is better)
Translates to: SRPQEPGLSLSLSLSFSPGMPSS*YLSRVE
Trigger: CTCTACTCTGGAGAGATACAAAGAGGAAGGCATTCC...TGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTGGGGCCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CAA 90 bp CATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGGCCATGTGTTCTGGCTCTTTCTGTTTCTCCTTCTaGGTTTCTTCCAGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: HVSLGPSYVLRVAMCSGSFCFSF*VSSSCS
Trigger: GCTGCAGCTGGAAGAAACCAAGAAGGAGAAACAGAA...AGAGCCAGAACACATGGCCACCCTCAAGACATAGGATGGGCCCAGAGAGACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS TCA 90 bp GTCTTCTCATCCTTACGATGTGACTCTGTTACTCTGTCCTTGCTCTaGGGACTGTCCCACTTGCTTCTCCAACCCAAGAAACCTCCCCAC +
Preference number: 5 (lower is better)
Translates to: VFSSLRCDSVTLSLL*GLSHLLLQPKKPPH
Trigger: GTGGGGAGGTTTCTTGGGTTGGAGAAGCAAGTGGGACAGTCCTCAGAGCAAGGACAGAGTAACAGAGTCACATCGTAAGGATGAGAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS TCA 90 bp ATTGTTCTCCTGACTCACTTTCTCCCTGAGGCTCTTCTCAAACATTaGCTCCCCCAGTGCCTGGGCCAGCTGCAAGTCAAACTTCTTCTG +
Preference number: 5 (lower is better)
Translates to: IVLLTHFLPEALLKH*LPQCLGQLQVKLLL
Trigger: CAGAAGAAGTTTGACTTGCAGCTGGCCCAGGCACTGGGGGAGTCAATGTTTGAGAAGAGCCTCAGGGAGAAAGTGAGTCAGGAGAACAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS GCA 90 bp GATCCTCTGCTGTGCCTCCTCCAGCTGCTTCTGAACTTCCCCCAATaGATCTTGCACTTGCTGATACTTAGTCTTGAGTTCCTGAACCTC +
Preference number: 5 (lower is better)
Translates to: DPLLCLLQLLLNFPQ*ILHLLILSLEFLNL
Trigger: GAGGTTCAGGAACTCAAGACTAAGTATCAGCAAGTGCAAGATGCATTGGGGGAAGTTCAGAAGCAGCTGGAGGAGGCACAGCAGAGGATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS GCA 90 bp CCTTCATCTCTGAGTCCAATCTCTCCTCGCACTGTTGAAGGCGCTTaGGTAGGAAATCGTTCTCCATCTGAGCACAGTCCAAACGCATCT +
Preference number: 5 (lower is better)
Translates to: PSSLSPISPRTVEGA*VGNRSPSEHSPNAS
Trigger: AGATGCGTTTGGACTGTGCTCAGATGGAGAACGATTTCCTACGCAAGCGCCTTCAACAGTGCGAGGAGAGATTGGACTCAGAGATGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CCA 90 bp TTTGGTCTGGCGTCTGTAGTTGAGGCTCGGAAGCTTCCAGCTGAATaGGTCGCTGTCCAGAGTTTCTTCCATCAGGTGAGAAAATTGTCG +
Preference number: 5 (lower is better)
Translates to: FGLASVVEARKLPAE*VAVQSFFHQVRKLS
Trigger: CGACAATTTTCTCACCTGATGGAAGAAACTCTGGACAGCGACCCATTCAGCTGGAAGCTTCCGAGCCTCAACTACAGACGCCAGACCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CAA 90 bp CCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGCACCATGGCCAGTCTTaGACCTTCAGGAACACAGCT +
Preference number: 5 (lower is better)
Translates to: PGLSLSLSLSFSPVLWSRHHGQS*TFRNTA
Trigger: AGCTGTGTTCCTGAAGGTCAAAGACTGGCCATGGTG...CCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CAA 90 bp CTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGGAGTCTTGTTGCTCAAGGGCATaGGTCTCCAGTTCCCAGACC +
Preference number: 5 (lower is better)
Translates to: LSLSLSLSFSPVLWSRESCCSRA*VSSSQT
Trigger: GGTCTGGGAACTGGAGACCAATGCCCTTGAGCAACA...AGACTCCCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CAA 90 bp CCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGAGCTGCTCCAGCTGCTaGATGGTATTTTCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: PGLSLSLSLSFSPVLWSRSCSSC*MVFSCW
Trigger: CCAGCAGGAAAATACCATCAAGCAGCTGGAGCAGCT...CCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CAA 90 bp AGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGCGCTGCTGATAATATaGGCTGTTTTCCCGCTGCTG +
Preference number: 5 (lower is better)
Translates to: RSLVSLSLSLFLSLQCFGALLII*AVFPLL
Trigger: CAGCAGCGGGAAAACAGCCAATATTATCAGCAGCGC...TCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CAA 90 bp CCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGCAAATGGTAGGGCTTTaGTGGGAAGACTGGGTGGAG +
Preference number: 5 (lower is better)
Translates to: PGLSLSLSLSFSPVLWSRQMVGL*WEDWVE
Trigger: CTCCACCCAGTCTTCCCACAAAAGCCCTACCATTTG...CCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS TCA 90 bp TTCTGTTTCTCCTTCTTGGTTTCTTCCAGCTGCAGCTGTAGCTCCTaGATCTGCCCGATGTCAGCAGCTGACTGTGCAATGAGGTCTTTG +
Preference number: 5 (lower is better)
Translates to: FCFSFLVSSSCSCSS*ICPMSAADCAMRSL
Trigger: CAAAGACCTCATTGCACAGTCAGCTGCTGACATCGGGCAGATTCAGGAGCTACAGCTGCAGCTGGAAGAAACCAAGAAGGAGAAACAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CAA 90 bp GGTGATCTGCTAGGACATGTCTCTCTGGGCCCATCCTATGTCTTGAGGGTGGCCACATTGTTGGTCTTGTaGGTTTGGTTAGTTGGAACT +
Preference number: 5 (lower is better)
Translates to: GDLLGHVSLGPSYVLRVATLLVL*VWLVGT
Trigger: AGTTCCAACTAACCAAACCAACAAGACCAACAATGT...GGCCACCCTCAAGACATAGGATGGGCCCAGAGAGACATGTCCTAGCAGATCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CAA 90 bp TGGATAGCAGGCCCCAGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTGGGACATTGTTGGTCTaGTTGGTTTGGTTAGTTGGA +
Preference number: 5 (lower is better)
Translates to: WIAGPRSLVSLSLSLFLSGTLLV*LVWLVG
Trigger: TCCAACTAACCAAACCAACAAGACCAACAATGTCCC...AGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCTGGGGCCTGCTATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CAA 90 bp CCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGGACATTTCCCACCCTTaGTGCTTTGGCCTGTATCTC +
Preference number: 5 (lower is better)
Translates to: PGLSLSLSLSFSPVLWSRDISHP*CFGLYL
Trigger: GAGATACAGGCCAAAGCACAAAGGGTGGGAAATGTC...CCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CAA 90 bp CCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGGACCTGAGAGGGATTTaGATCCACTACAGCCACTGT +
Preference number: 5 (lower is better)
Translates to: PGLSLSLSLSFSPVLWSRDLRGI*IHYSHC
Trigger: ACAGTGGCTGTAGTGGATCAAAATCCCTCTCAGGTC...CCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CAA 90 bp CTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGGAGTCTCAGGCCACATCTCCTTaGAAGCGTTCATCAGCAAGC +
Preference number: 5 (lower is better)
Translates to: LSLSLSLSFSPVLWSRESQATSP*KRSSAS
Trigger: GCTTGCTGATGAACGCTTCAAAGGAGATGTGGCCTG...AGACTCCCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CAA 90 bp CCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGTTCTCCAGCTCTTCCTaGCTGATTGACGTCTTGCTG +
Preference number: 5 (lower is better)
Translates to: PGLSLSLSLSFSPVLWSRFSSSS*LIDVLL
Trigger: CAGCAAGACGTCAATCAGCAAGGAAGAGCTGGAGAA...CCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS TCA 90 bp AGCTTCCAGCTGAATGGGTCGCTGTCCAGAGTTTCTTCCATCAGGTaGGAAAATTGTCGATTCTGGAAGACCAGAGGTTCCTTCCCAAGT +
Preference number: 5 (lower is better)
Translates to: SFQLNGSLSRVSSIR*ENCRFWKTRGSFPS
Trigger: ACTTGGGAAGGAACCTCTGGTCTTCCAGAATCGACAATTTTCTCACCTGATGGAAGAAACTCTGGACAGCGACCCATTCAGCTGGAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CCA 90 bp TGGTCACACAGGGTTCCAATCAAGCCTTCCAGGTCATGCTTCTCATaGAGAGCCACCTGTTTTTCTTCATATTCCTGCTCCAACTGCATC +
Preference number: 5 (lower is better)
Translates to: WSHRVPIKPSRSCFS*RATCFSSYSCSNCI
Trigger: GATGCAGTTGGAGCAGGAATATGAAGAAAAACAGGTGGCTCTCCATGAGAAGCATGACCTGGAAGGCTTGATTGGAACCCTGTGTGACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CCA 90 bp CGAAGCCGGATGACCAGCACCTCAAATCTTTTTATCTGCACCTTCTaGAATTCGGTCTTGTTCTCCAGGTCACAGATGATGGCTTCCTGT +
Preference number: 5 (lower is better)
Translates to: RSRMTSTSNLFICTF*NSVLFSRSQMMASC
Trigger: ACAGGAAGCCATCATCTGTGACCTGGAGAACAAGACCGAATTCCAGAAGGTGCAGATAAAAAGATTTGAGGTGCTGGTCATCCGGCTTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CAA 90 bp CCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGGGCTTGGGGACATTGTaGGTCTTGTTGGTTTGGTTA +
Preference number: 5 (lower is better)
Translates to: PGLSLSLSLSFSPVLWSRGLGTL*VLLVWL
Trigger: TAACCAAACCAACAAGACCAACAATGTCCCCAAGCC...CCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CAA 90 bp CTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGGAGTCTCTGGTGCCTAGGATTTaGAAAGCCTGGAGTGTCAAC +
Preference number: 5 (lower is better)
Translates to: LSLSLSLSFSPVLWSRESLVPRI*KAWSVN
Trigger: GTTGACACTCCAGGCTTTCAAAATCCTAGGCACCAG...AGACTCCCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CAA 90 bp GGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTTCCCCCAATGCATCTaGCACTTGCTGATACTTAGT +
Preference number: 5 (lower is better)
Translates to: GAWSLSLSLSFFLSSALEFPQCI*HLLILS
Trigger: ACTAAGTATCAGCAAGTGCAAGATGCATTGGGGGAA...CTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CAA 90 bp AGGAGCCTGGTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGATGTGCAATGAGGTCTTaGTGCTTCTGCATGAGGTCA +
Preference number: 5 (lower is better)
Translates to: RSLVSLSLSLFLSLQCFGCAMRS*CFCMRS
Trigger: TGACCTCATGCAGAAGCACAAAGACCTCATTGCACA...TCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGACCAGGCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CCA 90 bp CACCATGGCCAGTCTTTGACCTTCAGGAACACAGCTAGATTCTTCTaGATACACAGTGTAGCCAGCCTGCGGATCTTCAGCTTCTTATAT +
Preference number: 5 (lower is better)
Translates to: HHGQSLTFRNTARFF*IHSVASLRIFSFLY
Trigger: ATATAAGAAGCTGAAGATCCGCAGGCTGGCTACACTGTGTATCCAGAAGAATCTAGCTGTGTTCCTGAAGGTCAAAGACTGGCCATGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS GCA 90 bp ATACTGTCTCGAAGCCGGATGACCAGCACCTCAAATCTTTTTATCTaGACCTTCTGGAATTCGGTCTTGTTCTCCAGGTCACAGATGATG +
Preference number: 5 (lower is better)
Translates to: ILSRSRMTSTSNLFI*TFWNSVLFSRSQMM
Trigger: CATCATCTGTGACCTGGAGAACAAGACCGAATTCCAGAAGGTGCAGATAAAAAGATTTGAGGTGCTGGTCATCCGGCTTCGAGACAGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS-3UTR CAA 90 bp CTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCCAGTGCTTTGGAGTAGGGAGTCTAACTCTTCACCCATCTaGATCATACTGTCTCGAAGC +
Preference number: 5 (lower is better)
Translates to: LSLSLSLSFSPVLWSRESNSSPI*IILSRS
Trigger: GCTTCGAGACAGTATGATCAAGATGGGTGAAGAGTT...AGACTCCCTACTCCAAAGCACTGGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CCA 72 bp CCGATGGCTGCCCCGTGGACTCTGATAGCTGTCCCGTaGGCCCTGATGGCTGCCCCGTGGGCCCTGATGGCT +
Preference number: 6 (lower is better)
Translates to: PMAAPWTLIAVP*ALMAAPWALMA
Trigger: AGCCATCAGGGCCCACGGGGCAGCCATCAGGGCCCACGGGACAGCTATCAGAGTCCACGGGGCAGCCATCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CCA 72 bp CTGTGCTCGGGGGACATCCGCTCCCCGCCGTCACCTTaGAGTCTCGGGACTCTTGGACCACTTCCGGTGCCG +
Preference number: 6 (lower is better)
Translates to: LCSGDIRSPPSP*SLGTLGPLPVP
Trigger: CGGCACCGGAAGTGGTCCAAGAGTCCCGAGACTCCAAGGTGACGGCGGGGAGCGGATGTCCCCCGAGCACAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS GCA 72 bp CTCCCCACCTTTCCTTCCATCTTCACTGGAGCCTCCTaGTGCTGCCCCGTGGGCCCTGCTGGCTGTCCCGTG +
Preference number: 6 (lower is better)
Translates to: LPTFPSIFTGAS*CCPVGPAGCPV
Trigger: CACGGGACAGCCAGCAGGGCCCACGGGGCAGCAGCAGGAGGCTCCAGTGAAGATGGAAGGAAAGGTGGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS GCA 72 bp TCTTCCTCTGTGCACACACGGGGCTCCCCGGCTCCCTaGACCCTGCTCTCTGGCTGGCCGTCCCTCTTTGCA +
Preference number: 6 (lower is better)
Translates to: SSSVHTRGSPAP*TLLSGWPSLFA
Trigger: TGCAAAGAGGGACGGCCAGCCAGAGAGCAGGGTGCAGGGAGCCGGGGAGCCCCGTGTGTGCACAGAGGAAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS GCA 72 bp CTCAGCAGCGTCAGCTCCTCCTCCTTGGCTCGAAGCTaGTCAGTGCCGAGCGTGGAACTCAGCAGGGGCCGG +
Preference number: 6 (lower is better)
Translates to: LSSVSSSSLARS*SVPSVELSRGR
Trigger: CCGGCCCCTGCTGAGTTCCACGCTCGGCACTGAGCAGCTTCGAGCCAAGGAGGAGGAGCTGACGCTGCTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CAA 72 bp TCTGTGCTCGGGGGACATCCGCTCCCCGCCGTCACCTaGGAGTCTCGGGACTCTTGGACCACTTCCGGTGCC +
Preference number: 6 (lower is better)
Translates to: SVLGGHPLPAVT*ESRDSWTTSGA
Trigger: GGCACCGGAAGTGGTCCAAGAGTCCCGAGACTCCAAGGTGACGGCGGGGAGCGGATGTCCCCCGAGCACAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CAA 90 bp GCCAGGATCTCTGTGCTCGGGGGACATCCGCTCCCCGCCGTCACCTaGGAGTCTCGGGACTCTTGGACCACTTCCGGTGCCGCCTGTACT +
Preference number: 6 (lower is better)
Translates to: ARISVLGGHPLPAVT*ESRDSWTTSGAACT
Trigger: AGTACAGGCGGCACCGGAAGTGGTCCAAGAGTCCCGAGACTCCAAGGTGACGGCGGGGAGCGGATGTCCCCCGAGCACAGAGATCCTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS GCA 72 bp CTGCCTGAGGCTTCACCACATCCACTTCTTCCTCTGTaGACACACGGGGCTCCCCGGCTCCCTGCACCCTGC +
Preference number: 6 (lower is better)
Translates to: LPEASPHPLLPL*THGAPRLPAPC
Trigger: GCAGGGTGCAGGGAGCCGGGGAGCCCCGTGTGTGCACAGAGGAAGAAGTGGATGTGGTGAAGCCTCAGGCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS TCA 72 bp GGACTCCAGACATGGCCGCCTGGGACGAAGCGTAGGTaGCAGGAGTCCCGTGGGGGAGCTCAGCTTTCTCCT +
Preference number: 6 (lower is better)
Translates to: GLQTWPPGTKRR*QESRGGAQLSP
Trigger: AGGAGAAAGCTGAGCTCCCCCACGGGACTCCTGTCACCTACGCTTCGTCCCAGGCGGCCATGTCTGGAGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CCA 72 bp GCTCTGCCTCTCCTAAGTGAGGAAGCCCGGGTGGTCTaGAAGATGGGGAGCACAGGGCCATCCCCCAGATGC +
Preference number: 6 (lower is better)
Translates to: ALPLLSEEARVV*KMGSTGPSPRC
Trigger: GCATCTGGGGGATGGCCCTGTGCTCCCCATCTTCCAGACCACCCGGGCTTCCTCACTTAGGAGAGGCAGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CAA 72 bp TCCCGTTGCCTCTCCAGCCTGGAGACCACACCCGCCTaGAGGAAAACTTGGCTGTGCCCCACGGCCACAGCT +
Preference number: 6 (lower is better)
Translates to: SRCLSSLETTPA*RKTWLCPTATA
Trigger: AGCTGTGGCCGTGGGGCACAGCCAAGTTTTCCTCAAGGCGGGTGTGGTCTCCAGGCTGGAGAGGCAACGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS TCA 72 bp GGTTGGCCGGGTGGACCTGCTCCTCATCCACTTCGATaGCAGTCCTGTCTGCATCGATGCAGAGCCGCACCC +
Preference number: 6 (lower is better)
Translates to: GWPGGPAPHPLR*QSCLHRCRAAP
Trigger: GGGTGCGGCTCTGCATCGATGCAGACAGGACTGTCATCGAAGTGGATGAGGAGCAGGTCCACCCGGCCAACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS TCA 72 bp TTGGCCCCGGGTGGACCTGCTCCTCATCCACTTCGATaGCAGTCCTGTCTGCATCGATGCAGAGCCGCACCC +
Preference number: 6 (lower is better)
Translates to: LAPGGPAPHPLR*QSCLHRCRAAP
Trigger: GGGTGCGGCTCTGCATCGATGCAGACAGGACTGTCATCGAAGTGGATGAGGAGCAGGTCCACCCGGGGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
CDS GCA 72 bp CATCTGAGCACAGTCCAAACGCATCTGCCACTCGTCTaGTCCCCCTGCTGGCTTCTCCTCCAGGTTGGCCCC +
Preference number: 6 (lower is better)
Translates to: HLSTVQTHLPLV*SPCWLLLQVGP
Trigger: GGGGCCAACCTGGAGGAGAAGCCAGCAGGGGGAGCAGACGAGTGGCAGATGCGTTTGGACTGTGCTCAGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS GCA 72 bp ACAGGAGTCCCGTGGGGGAGCTCAGCTTTCTCCTCGTaGAGGGTCCCGATTCTAAGAGGGACTCGCAGGAGC +
Preference number: 6 (lower is better)
Translates to: TGVPWGSSAFSS*RVPILRGTRRS
Trigger: GCTCCTGCGAGTCCCTCTTAGAATCGGGACCCTGCACGAGGAGAAAGCTGAGCTCCCCCACGGGACTCCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CCA 72 bp GGTGGAGAGAGGCAGAACCGGCCTTCGAGGCATCTCTaGCAGCATCCCAGGCTCCGCTCAAAGCCGAAGATG +
Preference number: 6 (lower is better)
Translates to: GGERQNRPSRHL*QHPRLRSKPKM
Trigger: CATCTTCGGCTTTGAGCGGAGCCTGGGATGCTGCCAGAGATGCCTCGAAGGCCGGTTCTGCCTCTCTCCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CCA 72 bp AGCACAGGGCCATCCCCCAGATGCAGAGTGGAACCCTaGCCTCTCTGGGCTCTCTTCCTGCGTAGCTCTTCC +
Preference number: 6 (lower is better)
Translates to: STGPSPRCRVEP*PLWALFLRSSS
Trigger: GGAAGAGCTACGCAGGAAGAGAGCCCAGAGAGGCCAGGGTTCCACTCTGCATCTGGGGGATGGCCCTGTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CCA 72 bp CCGCTCCCCGCCGTCACCTTGGAGTCTCGGGACTCTTaGACCACTTCCGGTGCCGCCTGTACTTTTGAAGGA +
Preference number: 6 (lower is better)
Translates to: PLPAVTLESRDS*TTSGAACTFEG
Trigger: TCCTTCAAAAGTACAGGCGGCACCGGAAGTGGTCCAAGAGTCCCGAGACTCCAAGGTGACGGCGGGGAGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CAA 72 bp AGACTGCCCTCTGGCTGGGAGCTGATGACAGAGACGTaGTCCCCCTCTTTCCCGCTGCGGCTGCTACAGTCC +
Preference number: 6 (lower is better)
Translates to: RLPSGWELMTET*SPSFPLRLLQS
Trigger: GGACTGTAGCAGCCGCAGCGGGAAAGAGGGGGACAACGTCTCTGTCATCAGCTCCCAGCCAGAGGGCAGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CAA 90 bp CCGTTGCCTCTCCAGCCTGGAGACCACACCCGCCTTGAGGAAAACTaGGCTGTGCCCCACGGCCACAGCTTTCTTCTCCAGATCCAGGGT +
Preference number: 6 (lower is better)
Translates to: PLPLQPGDHTRLEEN*AVPHGHSFLLQIQG
Trigger: ACCCTGGATCTGGAGAAGAAAGCTGTGGCCGTGGGGCACAGCCAAGTTTTCCTCAAGGCGGGTGTGGTCTCCAGGCTGGAGAGGCAACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS TCA 72 bp GGGCAGTGTCCTTTTGGCGGGTGTTCCTGTGGGACCTaGCTCCTGAGGTCTCTCCCCACTAGTGCTGGTCAC +
Preference number: 6 (lower is better)
Translates to: GQCPFGGCSCGT*LLRSLPTSAGH
Trigger: GTGACCAGCACTAGTGGGGAGAGACCTCAGGAGTCAGGTCCCACAGGAACACCCGCCAAAAGGACACTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS TCA 72 bp GTCTCCCTCATCGCTACTGGCTCTGCCTCTCCTAAGTaGGGAAGCCCGGGTGGTCTGGAAGATGGGGAGCAC +
Preference number: 6 (lower is better)
Translates to: VSLIATGSASPK*GSPGGLEDGEH
Trigger: GTGCTCCCCATCTTCCAGACCACCCGGGCTTCCTCACTTAGGAGAGGCAGAGCCAGTAGCGATGAGGGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS GCA 72 bp GACCTGCTCCTCATCCACTTCGATGACAGTCCTGTCTaGATCGATGCAGAGCCGCACCCTTCCAGCAGGCGG +
Preference number: 6 (lower is better)
Translates to: DLLLIHFDDSPV*IDAEPHPSSRR
Trigger: CCGCCTGCTGGAAGGGTGCGGCTCTGCATCGATGCAGACAGGACTGTCATCGAAGTGGATGAGGAGCAGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000086617.11
ENSMUST00000183273.2
CDS GCA 72 bp GCTTGGTCCAGCTCAGAGGGGTTGGCCGGGTGGACCTaGTCCTCATCCACTTCGATGACAGTCCTGTCTGCA +
Preference number: 6 (lower is better)
Translates to: AWSSSEGLAGWT*SSSTSMTVLSA
Trigger: TGCAGACAGGACTGTCATCGAAGTGGATGAGGAGCAGGTCCACCCGGCCAACCCCTCTGAGCTGGACCAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS GCA 72 bp TCCGTGGCCAGGGACAGGGAACAGCTCATCCAGGATTaGAGACTGCCCTCTGGCTGGGAGCTGATGACAGAG +
Preference number: 6 (lower is better)
Translates to: SVARDREQLIQD*RLPSGWELMTE
Trigger: CTCTGTCATCAGCTCCCAGCCAGAGGGCAGTCTGCAATCCTGGATGAGCTGTTCCCTGTCCCTGGCCACGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CCA 72 bp CCTTCTGATCTGCCTTGGCCAACTCTGGATCCAGCTTaGCCACCATCAGCAGCACATCGCCCCTCCTCACGC +
Preference number: 6 (lower is better)
Translates to: PSDLPWPTLDPA*PPSAAHRPSSR
Trigger: GCGTGAGGAGGGGCGATGTGCTGCTGATGGTGGCCAAGCTGGATCCAGAGTTGGCCAAGGCAGATCAGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CCA 72 bp CTTCCAAGGCTGCCTGCAGGTCCGCGATGCGTCGGATaGACGTCTCCAGGTCTGTCTGCAGCGTTTGTCTCA +
Preference number: 6 (lower is better)
Translates to: LPRLPAGPRCVG*TSPGLSAAFVS
Trigger: TGAGACAAACGCTGCAGACAGACCTGGAGACGTCCATCCGACGCATCGCGGACCTGCAGGCAGCCTTGGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CCA 72 bp CGGGGATCCCCTCTGCTCCCAGAGGAGATTTCACCCTaGTCTTCAGCGAGAGGTCTCCCTCATCGCTACTGG +
Preference number: 6 (lower is better)
Translates to: RGSPLLPEEISP*SSARGLPHRYW
Trigger: CCAGTAGCGATGAGGGAGACCTCTCGCTGAAGACCAGGGTGAAATCTCCTCTGGGAGCAGAGGGGATCCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CAA 72 bp CAGTTCCCAGACCCTCTCTTTCAGGCTGGCCACACCTaGATCCCCCACAGAGGCACAGCTCAGCAGCTCCCT +
Preference number: 6 (lower is better)
Translates to: QFPDPLFQAGHT*IPHRGTAQQLP
Trigger: AGGGAGCTGCTGAGCTGTGCCTCTGTGGGGGATCAAGGTGTGGCCAGCCTGAAAGAGAGGGTCTGGGAACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CAA 72 bp GTCCGTGGCCAGGGACAGGGAACAGCTCATCCAGGATaGCAGACTGCCCTCTGGCTGGGAGCTGATGACAGA +
Preference number: 6 (lower is better)
Translates to: VRGQGQGTAHPG*QTALWLGADDR
Trigger: TCTGTCATCAGCTCCCAGCCAGAGGGCAGTCTGCAATCCTGGATGAGCTGTTCCCTGTCCCTGGCCACGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS TCA 72 bp CCCACTTCCTTAGCGGGACTGGGGGTTCCACAGGTCTaGCTTCAGCCCCTGCAACCTTGGGCTCATCCTCTT +
Preference number: 6 (lower is better)
Translates to: PTSLAGLGVPQV*LQPLQPWAHPL
Trigger: AAGAGGATGAGCCCAAGGTTGCAGGGGCTGAAGTCAGACCTGTGGAACCCCCAGTCCCGCTAAGGAAGTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS TCA 72 bp GCTCTCTGGCTGGCCGTCCCTCTTTGCAGCCTCTGCTaGTATCCCCGTTGTAGGAATCCTATCCGGGGCCTT +
Preference number: 6 (lower is better)
Translates to: ALWLAVPLCSLC*YPRCRNPIRGL
Trigger: AAGGCCCCGGATAGGATTCCTACAACGGGGATATCAGCAGAGGCTGCAAAGAGGGACGGCCAGCCAGAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS TCA 72 bp TCTCTAGCAGCACCCGCGTGTCCTCCAGGTCCCAAGTaGGGTGGTGACACTTCCTCTTCAGCTGGTGAGCCA +
Preference number: 6 (lower is better)
Translates to: SLAAPACPPGPK*GGDTSSSAGEP
Trigger: TGGCTCACCAGCTGAAGAGGAAGTGTCACCACCTCACTTGGGACCTGGAGGACACGCGGGTGCTGCTAGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS GCA 72 bp CCACTCTGGCCCCCTCTATCCGGGTCCTGCAGGATCTaGTTCTCCTCCATAGGCCTCAGCGTAGAAAGCCTT +
Preference number: 6 (lower is better)
Translates to: PLWPPLSGSCRI*FSSIGLSVESL
Trigger: AAGGCTTTCTACGCTGAGGCCTATGGAGGAGAAGCAGATCCTGCAGGACCCGGATAGAGGGGGCCAGAGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS GCA 72 bp CTGGAGACCACACCCGCCTTGAGGAAAACTTGGCTGTaGCCCACGGCCACAGCTTTCTTCTCCAGATCCAGG +
Preference number: 6 (lower is better)
Translates to: LETTPALRKTWL*PTATAFFSRSR
Trigger: CCTGGATCTGGAGAAGAAAGCTGTGGCCGTGGGGCACAGCCAAGTTTTCCTCAAGGCGGGTGTGGTCTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS GCA 72 bp AAGAGAACGATATTCCGGGACACCAGCTTCTCCCGTTaGCTCTCCAGCCTGGAGACCACACCCGCCTTGAGG +
Preference number: 6 (lower is better)
Translates to: KRTIFRDTSFSR*LSSLETTPALR
Trigger: CCTCAAGGCGGGTGTGGTCTCCAGGCTGGAGAGGCAACGGGAGAAGCTGGTGTCCCGGAATATCGTTCTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS GCA 72 bp GCCTCTTCATACGCACTCTGCAGCTCCCCAAGCTTCTaGTCCAGCTCTGTCCGGGCCTTCATCTCTGAGTCC +
Preference number: 6 (lower is better)
Translates to: ASSYALCSSPSF*SSSVRAFISES
Trigger: GGACTCAGAGATGAAGGCCCGGACAGAGCTGGAGCAGAAGCTTGGGGAGCTGCAGAGTGCGTATGAAGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS GCA 72 bp TCCGCGATGCGTCGGATGGACGTCTCCAGGTCTGTCTaGAGCGTTTGTCTCACAGTTGCCAGCTCCTCCACA +
Preference number: 6 (lower is better)
Translates to: SAMRRMDVSRSV*SVCLTVASSST
Trigger: TGTGGAGGAGCTGGCAACTGTGAGACAAACGCTGCAGACAGACCTGGAGACGTCCATCCGACGCATCGCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS GCA 72 bp TCACTATCACTTGACACCACCTCTTCCAAGGCTGCCTaGAGGTCCGCGATGCGTCGGATGGACGTCTCCAGG +
Preference number: 6 (lower is better)
Translates to: SLSLDTTSSKAA*RSAMRRMDVSR
Trigger: CCTGGAGACGTCCATCCGACGCATCGCGGACCTGCAGGCAGCCTTGGAAGAGGTGGTGTCAAGTGATAGTGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CCA 72 bp TCCAGCCTGGAGACCACACCCGCCTTGAGGAAAACTTaGCTGTGCCCCACGGCCACAGCTTTCTTCTCCAGA +
Preference number: 6 (lower is better)
Translates to: SSLETTPALRKT*LCPTATAFFSR
Trigger: TCTGGAGAAGAAAGCTGTGGCCGTGGGGCACAGCCAAGTTTTCCTCAAGGCGGGTGTGGTCTCCAGGCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CCA 72 bp CAGGGAACAGCTCATCCAGGATTGCAGACTGCCCTCTaGCTGGGAGCTGATGACAGAGACGTTGTCCCCCTC +
Preference number: 6 (lower is better)
Translates to: QGTAHPGLQTAL*LGADDRDVVPL
Trigger: GAGGGGGACAACGTCTCTGTCATCAGCTCCCAGCCAGAGGGCAGTCTGCAATCCTGGATGAGCTGTTCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CCA 72 bp GGAAGACCAGAGGTTCCTTCCCAAGTTCTAAGGAGATaGCGTCGTCCACGGAGGACTCCAGACATGGCCGCC +
Preference number: 6 (lower is better)
Translates to: GRPEVPSQVLRR*RRPRRTPDMAA
Trigger: GGCGGCCATGTCTGGAGTCCTCCGTGGACGACGCCATCTCCTTAGAACTTGGGAAGGAACCTCTGGTCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CAA 72 bp CTCCGCCTTCAGTTCCTCCAGGCGCTGCTGATAATATaGGCTGTTTTCCCGCTGCTGGGCCTCCGCCTTGAC +
Preference number: 6 (lower is better)
Translates to: LRLQFLQALLII*AVFPLLGLRLD
Trigger: GTCAAGGCGGAGGCCCAGCAGCGGGAAAACAGCCAATATTATCAGCAGCGCCTGGAGGAACTGAAGGCGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CAA 90 bp GTCGGATGGACGTCTCCAGGTCTGTCTGCAGCGTTTGTCTCACAGTaGCCAGCTCCTCCACATACTTCTCCAGTTCCATGCAGCGCCGGC +
Preference number: 6 (lower is better)
Translates to: VGWTSPGLSAAFVSQ*PAPPHTSPVPCSAG
Trigger: GCCGGCGCTGCATGGAACTGGAGAAGTATGTGGAGGAGCTGGCAACTGTGAGACAAACGCTGCAGACAGACCTGGAGACGTCCATCCGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CAA 90 bp TCTGTGGACAGCAAAGCCTTCCCCATCCCCCAAATGGTAGGGCTTTaGTGGGAAGACTGGGTGGAGAGAGGCAGAACCGGCCTTCGAGGC +
Preference number: 6 (lower is better)
Translates to: SVDSKAFPIPQMVGL*WEDWVERGRTGLRG
Trigger: GCCTCGAAGGCCGGTTCTGCCTCTCTCCACCCAGTCTTCCCACAAAAGCCCTACCATTTGGGGGATGGGGAAGGCTTTGCTGTCCACAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CAA 90 bp GCTGGAGGTACTTCCTCATTATGCTTTCCACATCGTCGTCTCTCCTaGCAGAGCCAGGATCTCTGTGCTCGGGGGACATCCGCTCCCCGC +
Preference number: 6 (lower is better)
Translates to: AGGTSSLCFPHRRLS*QSQDLCARGTSAPR
Trigger: GCGGGGAGCGGATGTCCCCCGAGCACAGAGATCCTGGCTCTGCAAGGAGAGACGACGATGTGGAAAGCATAATGAGGAAGTACCTCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CAA 90 bp CGCTCTGCCCGCTCACTCTCCAGCGCCTGGCAGGCCACATCTCCTTaGAAGCGTTCATCAGCAAGCTCTGAGGTCAAGTCTGTGATCTTG +
Preference number: 6 (lower is better)
Translates to: RSARSLSSAWQATSP*KRSSASSEVKSVIL
Trigger: CAAGATCACAGACTTGACCTCAGAGCTTGCTGATGAACGCTTCAAAGGAGATGTGGCCTGCCAGGCGCTGGAGAGTGAGCGGGCAGAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS GCA 72 bp CGGGTCAGCTGTTCCCTCATCTGGTTTAAGCACCGTTaGAAGCGTGAACCCGTCCTTCTGCACCAGCCAGAC +
Preference number: 6 (lower is better)
Translates to: RVSCSLIWFKHR*KREPVLLHQPD
Trigger: GTCTGGCTGGTGCAGAAGGACGGGTTCACGCTTGCAACGGTGCTTAAACCAGATGAGGGAACAGCTGACCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS GCA 72 bp AGGATCTCCTCTGGATTCCTTGGCCCCGGGTGGACCTaGTCCTCATCCACTTCGATGACAGTCCTGTCTGCA +
Preference number: 6 (lower is better)
Translates to: RISSGFLGPGWT*SSSTSMTVLSA
Trigger: TGCAGACAGGACTGTCATCGAAGTGGATGAGGAGCAGGTCCACCCGGGGCCAAGGAATCCAGAGGAGATCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
CDS CCA 72 bp GGGGCTCCTTTCCTGGAATGTCTGCGCTGTTCTGAGTaGTGGATGAGCTGTCCTGGGAAGTCTGCTGGCTTC +
Preference number: 6 (lower is better)
Translates to: GAPFLECLRCSE*WMSCPGKSAGF
Trigger: GAAGCCAGCAGACTTCCCAGGACAGCTCATCCACCACTCAGAACAGCGCAGACATTCCAGGAAAGGAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CCA 72 bp ACGAGGTTGGACCTTCTGATCTGCCTTGGCCAACTCTaGATCCAGCTTGGCCACCATCAGCAGCACATCGCC +
Preference number: 6 (lower is better)
Translates to: TRLDLLICLGQL*IQLGHHQQHIA
Trigger: GGCGATGTGCTGCTGATGGTGGCCAAGCTGGATCCAGAGTTGGCCAAGGCAGATCAGAAGGTCCAACCTCGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CCA 72 bp CGGGGACATCACGAGGTTGGACCTTCTGATCTGCCTTaGCCAACTCTGGATCCAGCTTGGCCACCATCAGCA +
Preference number: 6 (lower is better)
Translates to: RGHHEVGPSDLP*PTLDPAWPPSA
Trigger: TGCTGATGGTGGCCAAGCTGGATCCAGAGTTGGCCAAGGCAGATCAGAAGGTCCAACCTCGTGATGTCCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CCA 72 bp GTTGCTCCTTGTTTCCTGCCTCCTGAGCTTGGGACCTaGTCCCCTGCTCCTCTGTGCTCTGAGACTCACCTT +
Preference number: 6 (lower is better)
Translates to: VAPCFLPPELGT*SPAPLCSETHL
Trigger: AAGGTGAGTCTCAGAGCACAGAGGAGCAGGGGACCAGGTCCCAAGCTCAGGAGGCAGGAAACAAGGAGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CCA 72 bp CACCCTTCCAGCAGGCGGGTCAGCTGTTCCCTCATCTaGTTTAAGCACCGTTGCAAGCGTGAACCCGTCCTT +
Preference number: 6 (lower is better)
Translates to: HPSSRRVSCSLI*FKHRCKREPVL
Trigger: AAGGACGGGTTCACGCTTGCAACGGTGCTTAAACCAGATGAGGGAACAGCTGACCCGCCTGCTGGAAGGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CCA 72 bp CTGTGCATGTTCTCCAGGTCCGCAGTCAGCACCTTCTaGGTCTTCAATGCGTCCTCACACTTGGCCTCGCTC +
Preference number: 6 (lower is better)
Translates to: LCMFSRSAVSTF*VFNASSHLASL
Trigger: GAGCGAGGCCAAGTGTGAGGACGCATTGAAGACCCAGAAGGTGCTGACTGCGGACCTGGAGAACATGCACAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CCA 72 bp CCATCCCCCAGATGCAGAGTGGAACCCTGGCCTCTCTaGGCTCTCTTCCTGCGTAGCTCTTCCACAAACTCT +
Preference number: 6 (lower is better)
Translates to: PSPRCRVEPWPL*ALFLRSSSTNS
Trigger: AGAGTTTGTGGAAGAGCTACGCAGGAAGAGAGCCCAGAGAGGCCAGGGTTCCACTCTGCATCTGGGGGATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CAA 72 bp TGTTCCCAGTTGCTCCTTGTTTCCTGCCTCCTGAGCTaGGGACCTGGTCCCCTGCTCCTCTGTGCTCTGAGA +
Preference number: 6 (lower is better)
Translates to: CSQLLLVSCLLS*GPGPLLLCALR
Trigger: TCTCAGAGCACAGAGGAGCAGGGGACCAGGTCCCAAGCTCAGGAGGCAGGAAACAAGGAGCAACTGGGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CAA 72 bp AGCAAAGCCTTCCCCATCCCCCAAATGGTAGGGCTTTaGTGGGAAGACTGGGTGGAGAGAGGCAGAACCGGC +
Preference number: 6 (lower is better)
Translates to: SKAFPIPQMVGL*WEDWVERGRTG
Trigger: GCCGGTTCTGCCTCTCTCCACCCAGTCTTCCCACAAAAGCCCTACCATTTGGGGGATGGGGAAGGCTTTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CAA 90 bp AGCAGGGGCCGGAGAGACGCCAGGAGCCCCCACCATGGCCAGTCTTaGACCTTCAGGAACACAGCTAGATTCTTCTGGATACACAGTGTA +
Preference number: 6 (lower is better)
Translates to: SRGRRDARSPHHGQS*TFRNTARFFWIHSV
Trigger: TACACTGTGTATCCAGAAGAATCTAGCTGTGTTCCTGAAGGTCAAAGACTGGCCATGGTGGGGGCTCCTGGCGTCTCTCCGGCCCCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CAA 90 bp GTCCGCGATGCGTCGGATGGACGTCTCCAGGTCTGTCTGCAGCGTTaGTCTCACAGTTGCCAGCTCCTCCACATACTTCTCCAGTTCCAT +
Preference number: 6 (lower is better)
Translates to: VRDASDGRLQVCLQR*SHSCQLLHILLQFH
Trigger: ATGGAACTGGAGAAGTATGTGGAGGAGCTGGCAACTGTGAGACAAACGCTGCAGACAGACCTGGAGACGTCCATCCGACGCATCGCGGAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS TCA 72 bp GCTCACTCTCCAGCGCCTGGCAGGCCACATCTCCTTTaGAGCGTTCATCAGCAAGCTCTGAGGTCAAGTCTG +
Preference number: 6 (lower is better)
Translates to: AHSPAPGRPHLL*SVHQQALRSSL
Trigger: CAGACTTGACCTCAGAGCTTGCTGATGAACGCTTCAAAGGAGATGTGGCCTGCCAGGCGCTGGAGAGTGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CCA 72 bp GGTTTGGTTAGTTGGAACTGCTGGGATCTCTACTTCTaGGGCTGTGAATGCTGCCGCCTTCCTCCTCCTGGC +
Preference number: 6 (lower is better)
Translates to: GLVSWNCWDLYF*GCECCRLPPPG
Trigger: GCCAGGAGGAGGAAGGCGGCAGCATTCACAGCCCCAGAAGTAGAGATCCCAGCAGTTCCAACTAACCAAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CCA 72 bp GCTCCTTTCCTGGAATGTCTGCGCTGTTCTGAGTGGTaGATGAGCTGTCCTGGGAAGTCTGCTGGCTTCCAG +
Preference number: 6 (lower is better)
Translates to: APFLECLRCSEW*MSCPGKSAGFQ
Trigger: CTGGAAGCCAGCAGACTTCCCAGGACAGCTCATCCACCACTCAGAACAGCGCAGACATTCCAGGAAAGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CCA 72 bp CCCTTTCTTTGTCCCTCCAGAATCTTTGGCTGGAGCTaGGGTCTTGTCCACGGGGACATCACGAGGTTGGAC +
Preference number: 6 (lower is better)
Translates to: PFLCPSRIFGWS*GLVHGDITRLD
Trigger: GTCCAACCTCGTGATGTCCCCGTGGACAAGACCCCAGCTCCAGCCAAAGATTCTGGAGGGACAAAGAAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CCA 72 bp GAACAGCTCATCCAGGATTGCAGACTGCCCTCTGGCTaGGAGCTGATGACAGAGACGTTGTCCCCCTCTTTC +
Preference number: 6 (lower is better)
Translates to: EQLIQDCRLPSG*ELMTETLSPSF
Trigger: GAAAGAGGGGGACAACGTCTCTGTCATCAGCTCCCAGCCAGAGGGCAGTCTGCAATCCTGGATGAGCTGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CCA 72 bp TCACAAAGGATCTCCTCTGGATTCCTTGGCCCCGGGTaGACCTGCTCCTCATCCACTTCGATGACAGTCCTG +
Preference number: 6 (lower is better)
Translates to: SQRISSGFLGPG*TCSSSTSMTVL
Trigger: CAGGACTGTCATCGAAGTGGATGAGGAGCAGGTCCACCCGGGGCCAAGGAATCCAGAGGAGATCCTTTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
CDS CCA 72 bp AGGGGTTGGCCTAAAGAACTCACAAAGGATCTCCTCTaGATTCCTTGGCCCCGGGTGGACCTGCTCCTCATC +
Preference number: 6 (lower is better)
Translates to: RGWPKELTKDLL*IPWPRVDLLLI
Trigger: GATGAGGAGCAGGTCCACCCGGGGCCAAGGAATCCAGAGGAGATCCTTTGTGAGTTCTTTAGGCCAACCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
CDS CAA 72 bp CGCTCACTCTCCAGCGCCTGGCAGGCCACATCTCCTTaGAAGCGTTCATCAGCAAGCTCTGAGGTCAAGTCT +
Preference number: 6 (lower is better)
Translates to: RSLSSAWQATSP*KRSSASSEVKS
Trigger: AGACTTGACCTCAGAGCTTGCTGATGAACGCTTCAAAGGAGATGTGGCCTGCCAGGCGCTGGAGAGTGAGCG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CAA 72 bp TCCGCCTTGACGGCCCGAGACAACTCTTCACCCATCTaGATCATACTGTCTCGAAGCCGGATGACCAGCACC +
Preference number: 6 (lower is better)
Translates to: SALTARDNSSPI*IILSRSRMTST
Trigger: GGTGCTGGTCATCCGGCTTCGAGACAGTATGATCAAGATGGGTGAAGAGTTGTCTCGGGCCGTCAAGGCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CAA 72 bp GCGTCGGATGGACGTCTCCAGGTCTGTCTGCAGCGTTaGTCTCACAGTTGCCAGCTCCTCCACATACTTCTC +
Preference number: 6 (lower is better)
Translates to: ASDGRLQVCLQR*SHSCQLLHILL
Trigger: GAGAAGTATGTGGAGGAGCTGGCAACTGTGAGACAAACGCTGCAGACAGACCTGGAGACGTCCATCCGACGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CAA 90 bp CTCCTGGCTTCTTTGGACTCTTTCTCTGTCTCTCGAACCAGCTGCTaGATGAAGCCCCCAGGGATGACAGAGAACAAGGGAGGCGGAGAG +
Preference number: 6 (lower is better)
Translates to: LLASLDSFSVSRTSC*MKPPGMTENKGGGE
Trigger: CTCTCCGCCTCCCTTGTTCTCTGTCATCCCTGGGGGCTTCATCAAGCAGCTGGTTCGAGAGACAGAGAAAGAGTCCAAAGAAGCCAGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CAA 90 bp GCTCCCTTTTCTGGCCCTGTAGCCTTTCCACCTCTTGCTTCAGCTTaGAGGCTTCCTGCTCCTTTTGCTCTAGCTGCTGCTGGAGCTGAC +
Preference number: 6 (lower is better)
Translates to: APFSGPVAFPPLASA*RLPAPFALAAAGAD
Trigger: GTCAGCTCCAGCAGCAGCTAGAGCAAAAGGAGCAGGAAGCCTCAAAGCTGAAGCAAGAGGTGGAAAGGCTACAGGGCCAGAAAAGGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CAA 90 bp TGCTGGGCCTCCGCCTTGACGGCCCGAGACAACTCTTCACCCATCTaGATCATACTGTCTCGAAGCCGGATGACCAGCACCTCAAATCTT +
Preference number: 6 (lower is better)
Translates to: CWASALTARDNSSPI*IILSRSRMTSTSNL
Trigger: AAGATTTGAGGTGCTGGTCATCCGGCTTCGAGACAGTATGATCAAGATGGGTGAAGAGTTGTCTCGGGCCGTCAAGGCGGAGGCCCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CAA 90 bp CCCGATTCTAAGAGGGACTCGCAGGAGCCAAAGCGTGTCTTCTGTTaGTCAGGCAGTAGGGTGATGTCCTCTGGACCCTCTGAGGAGATG +
Preference number: 6 (lower is better)
Translates to: PDSKRDSQEPKRVFC*SGSRVMSSGPSEEM
Trigger: CATCTCCTCAGAGGGTCCAGAGGACATCACCCTACTGCCTGACAAACAGAAGACACGCTTTGGCTCCTGCGAGTCCCTCTTAGAATCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS GCA 72 bp TTCTTCTGTCTCTTCTCCAGCTCATGGTTCCTACTCTaGTGGTTCTCTAGCAGCACCCGCGTGTCCTCCAGG +
Preference number: 6 (lower is better)
Translates to: FFCLFSSSWFLL*WFSSSTRVSSR
Trigger: CCTGGAGGACACGCGGGTGCTGCTAGAGAACCAGCAGAGTAGGAACCATGAGCTGGAGAAGAGACAGAAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS GCA 72 bp AGGCTCTTGCTCCGGGTCACATTTTCCAGTTCACTGTaGATGTTCTCCAGGTCCGCAGTCAGCACCTTCTGG +
Preference number: 6 (lower is better)
Translates to: RLLLRVTFSSSL*MFSRSAVSTFW
Trigger: CCAGAAGGTGCTGACTGCGGACCTGGAGAACATGCACAGTGAACTGGAAAATGTGACCCGGAGCAAGAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS GCA 72 bp TCTGGCAGCATCCCAGGCTCCGCTCAAAGCCGAAGATaGTGTTCTCAGCCTCTCAGAATCTCCAGCTTCTTC +
Preference number: 6 (lower is better)
Translates to: SGSIPGSAQSRR*CSQPLRISSFF
Trigger: GAAGAAGCTGGAGATTCTGAGAGGCTGAGAACAGCATCTTCGGCTTTGAGCGGAGCCTGGGATGCTGCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS GCA 72 bp CTTCCTCATTATGCTTTCCACATCGTCGTCTCTCCTTaGAGAGCCAGGATCTCTGTGCTCGGGGGACATCCG +
Preference number: 6 (lower is better)
Translates to: LPHYAFHIVVSP*RARISVLGGHP
Trigger: CGGATGTCCCCCGAGCACAGAGATCCTGGCTCTGCAAGGAGAGACGACGATGTGGAAAGCATAATGAGGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CCA 72 bp GGTGACACTTCCTCTTCAGCTGGTGAGCCATCTTCTTaGCCTCTTCATACGCACTCTGCAGCTCCCCAAGCT +
Preference number: 6 (lower is better)
Translates to: GDTSSSAGEPSS*PLHTHSAAPQA
Trigger: AGCTTGGGGAGCTGCAGAGTGCGTATGAAGAGGCCAAGAAGATGGCTCACCAGCTGAAGAGGAAGTGTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CCA 72 bp TCTTTCCCGCTGCGGCTGCTACAGTCCACTGCCGTCTaGACACTTTCTGTGTCACTATCACTTGACACCACC +
Preference number: 6 (lower is better)
Translates to: SFPLRLLQSTAV*TLSVSLSLDTT
Trigger: GGTGGTGTCAAGTGATAGTGACACAGAAAGTGTCCAGACGGCAGTGGACTGTAGCAGCCGCAGCGGGAAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CAA 72 bp CGGAGAGACGCCAGGAGCCCCCACCATGGCCAGTCTTaGACCTTCAGGAACACAGCTAGATTCTTCTGGATA +
Preference number: 6 (lower is better)
Translates to: RRDARSPHHGQS*TFRNTARFFWI
Trigger: TATCCAGAAGAATCTAGCTGTGTTCCTGAAGGTCAAAGACTGGCCATGGTGGGGGCTCCTGGCGTCTCTCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CAA 72 bp TCCTGCTGGCTGTGGATCTTCTGTTGCTCAAGGGCATaGGTCTCCAGTTCCCAGACCCTCTCTTTCAGGCTG +
Preference number: 6 (lower is better)
Translates to: SCWLWIFCCSRA*VSSSQTLSFRL
Trigger: CAGCCTGAAAGAGAGGGTCTGGGAACTGGAGACCAATGCCCTTGAGCAACAGAAGATCCACAGCCAGCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS TCA 72 bp GACGTCTTGCTGTCTTCAATGGTGGCCAGAAGGAGCTaGACATCAGACAACAGAGCGTGTGTCCTCCTGAGG +
Preference number: 6 (lower is better)
Translates to: DVLLSSMVARRS*TSDNRACVLLR
Trigger: CCTCAGGAGGACACACGCTCTGTTGTCTGATGTTCAGCTCCTTCTGGCCACCATTGAAGACAGCAAGACGTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS TCA 72 bp CTGGCTGTGCACCTTCTCCAGCTCTTCCTTGCTGATTaGCGTCTTGCTGTCTTCAATGGTGGCCAGAAGGAG +
Preference number: 6 (lower is better)
Translates to: LAVHLLQLFLAD*RLAVFNGGQKE
Trigger: CTCCTTCTGGCCACCATTGAAGACAGCAAGACGTCAATCAGCAAGGAAGAGCTGGAGAAGGTGCACAGCCAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS TCA 72 bp CCAGCTGGCTGTGCACCTTCTCCAGCTCTTCCTTGCTaGTTGACGTCTTGCTGTCTTCAATGGTGGCCAGAA +
Preference number: 6 (lower is better)
Translates to: PAGCAPSPALPC*LTSCCLQWWPE
Trigger: TTCTGGCCACCATTGAAGACAGCAAGACGTCAATCAGCAAGGAAGAGCTGGAGAAGGTGCACAGCCAGCTGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS GCA 72 bp AACTGCTGGGATCTCTACTTCTGGGGCTGTGAATGCTaGCGCCTTCCTCCTCCTGGCTTCTTTGGACTCTTT +
Preference number: 6 (lower is better)
Translates to: NCWDLYFWGCEC*RLPPPGFFGLF
Trigger: AAAGAGTCCAAAGAAGCCAGGAGGAGGAAGGCGGCAGCATTCACAGCCCCAGAAGTAGAGATCCCAGCAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS GCA 72 bp TTCCATCTTCTTTGGGGGACCCCCTCCTTCTTTCTCTaGTGTTCCCAGTTGCTCCTTGTTTCCTGCCTCCTG +
Preference number: 6 (lower is better)
Translates to: FHLLWGTPSFFL*CSQLLLVSCLL
Trigger: CAGGAGGCAGGAAACAAGGAGCAACTGGGAACAGCAGAGAAAGAAGGAGGGGGTCCCCCAAAGAAGATGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS GCA 72 bp GGTTTAAGCACCGTTGCAAGCGTGAACCCGTCCTTCTaGACCAGCCAGACTTTCTGTGCCTCGTACCATCTA +
Preference number: 6 (lower is better)
Translates to: GLSTVASVNPSF*TSQTFCASYHL
Trigger: TAGATGGTACGAGGCACAGAAAGTCTGGCTGGTGCAGAAGGACGGGTTCACGCTTGCAACGGTGCTTAAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS GCA 72 bp CCGATGTCAGCAGCTGACTGTGCAATGAGGTCTTTGTaGTTCTGCATGAGGTCATTCAGGTCACCCTGGTCC +
Preference number: 6 (lower is better)
Translates to: PMSAADCAMRSL*FCMRSFRSPWS
Trigger: GGACCAGGGTGACCTGAATGACCTCATGCAGAAGCACAAAGACCTCATTGCACAGTCAGCTGCTGACATCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CCA 72 bp TATTCCTGGCGAGACAGAAAGCCCCTACAGGCTGCTTaGAAGAGAACGATATTCCGGGACACCAGCTTCTCC +
Preference number: 6 (lower is better)
Translates to: YSWRDRKPLQAA*KRTIFRDTSFS
Trigger: GGAGAAGCTGGTGTCCCGGAATATCGTTCTCTTCCAAGCAGCCTGTAGGGGCTTTCTGTCTCGCCAGGAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CCA 72 bp TCTCTGCGGAGACGCTTTTCTACGTCAAAGTCCCGGTaGCCAATCTGGTCACACAGGGTTCCAATCAAGCCT +
Preference number: 6 (lower is better)
Translates to: SLRRRFSTSKSR*PIWSHRVPIKP
Trigger: AGGCTTGATTGGAACCCTGTGTGACCAGATTGGCCACCGGGACTTTGACGTAGAAAAGCGTCTCCGCAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CCA 72 bp GCGTCTGTAGTTGAGGCTCGGAAGCTTCCAGCTGAATaGGTCGCTGTCCAGAGTTTCTTCCATCAGGTGAGA +
Preference number: 6 (lower is better)
Translates to: ASVVEARKLPAE*VAVQSFFHQVR
Trigger: TCTCACCTGATGGAAGAAACTCTGGACAGCGACCCATTCAGCTGGAAGCTTCCGAGCCTCAACTACAGACGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CCA 72 bp CCTAAAGAACTCACAAAGGATCTCCTCTGGATTCCTTaGCCCCGGGTGGACCTGCTCCTCATCCACTTCGAT +
Preference number: 6 (lower is better)
Translates to: PKELTKDLLWIP*PRVDLLLIHFD
Trigger: ATCGAAGTGGATGAGGAGCAGGTCCACCCGGGGCCAAGGAATCCAGAGGAGATCCTTTGTGAGTTCTTTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183273.2
CDS CAA 72 bp TCTGGCCCTGTAGCCTTTCCACCTCTTGCTTCAGCTTaGAGGCTTCCTGCTCCTTTTGCTCTAGCTGCTGCT +
Preference number: 6 (lower is better)
Translates to: SGPVAFPPLASA*RLPAPFALAAA
Trigger: AGCAGCAGCTAGAGCAAAAGGAGCAGGAAGCCTCAAAGCTGAAGCAAGAGGTGGAAAGGCTACAGGGCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CAA 72 bp CAGGAGGTCTGCTCTCTCAAACTGCAACCTGTACAGTaGCTCATCCACCAGGCTCTTGCTCCGGGTCACATT +
Preference number: 6 (lower is better)
Translates to: QEVCSLKLQPVQ*LIHQALAPGHI
Trigger: AATGTGACCCGGAGCAAGAGCCTGGTGGATGAGCAACTGTACAGGTTGCAGTTTGAGAGAGCAGACCTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CAA 72 bp TGCCCGATGTCAGCAGCTGACTGTGCAATGAGGTCTTaGTGCTTCTGCATGAGGTCATTCAGGTCACCCTGG +
Preference number: 6 (lower is better)
Translates to: CPMSAADCAMRS*CFCMRSFRSPW
Trigger: CCAGGGTGACCTGAATGACCTCATGCAGAAGCACAAAGACCTCATTGCACAGTCAGCTGCTGACATCGGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CAA 72 bp ACGTCTCCAGGTCTGTCTGCAGCGTTTGTCTCACAGTaGCCAGCTCCTCCACATACTTCTCCAGTTCCATGC +
Preference number: 6 (lower is better)
Translates to: TSPGLSAAFVSQ*PAPPHTSPVPC
Trigger: GCATGGAACTGGAGAAGTATGTGGAGGAGCTGGCAACTGTGAGACAAACGCTGCAGACAGACCTGGAGACGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CAA 72 bp ACTTCCTCATTATGCTTTCCACATCGTCGTCTCTCCTaGCAGAGCCAGGATCTCTGTGCTCGGGGGACATCC +
Preference number: 6 (lower is better)
Translates to: TSSLCFPHRRLS*QSQDLCARGTS
Trigger: GGATGTCCCCCGAGCACAGAGATCCTGGCTCTGCAAGGAGAGACGACGATGTGGAAAGCATAATGAGGAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CAA 90 bp CAGCTTCTTATATTCCTGGCGAGACAGAAAGCCCCTACAGGCTGCTaGGAAGAGAACGATATTCCGGGACACCAGCTTCTCCCGTTGCCT +
Preference number: 6 (lower is better)
Translates to: QLLIFLARQKAPTGC*EENDIPGHQLLPLP
Trigger: AGGCAACGGGAGAAGCTGGTGTCCCGGAATATCGTTCTCTTCCAAGCAGCCTGTAGGGGCTTTCTGTCTCGCCAGGAATATAAGAAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CAA 90 bp ATCTCAAAGTGGACTCCAGGATGCTTCGAAGCCTCCTTCCCATCTTaGGCAGCTCCGGATGAAGGAGTATCACTCTTCCTTATGGCCGGG +
Preference number: 6 (lower is better)
Translates to: ISKWTPGCFEASFPS*AAPDEGVSLFLMAG
Trigger: CCCGGCCATAAGGAAGAGTGATACTCCTTCATCCGGAGCTGCCAAAGATGGGAAGGAGGCTTCGAAGCATCCTGGAGTCCACTTTGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS TCA 72 bp GGAGCTGAACATCAGACAACAGAGCGTGTGTCCTCCTaGGGTCTCTGCGGAGACGCTTTTCTACGTCAAAGT +
Preference number: 6 (lower is better)
Translates to: GAEHQTTERVSS*GLCGDAFLRQS
Trigger: ACTTTGACGTAGAAAAGCGTCTCCGCAGAGACCTCAGGAGGACACACGCTCTGTTGTCTGATGTTCAGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS TCA 72 bp CTTCTTCACTTACCCTGGGACTGTGGAAAGAGCTGCTaGCCACTGACTGTCCAGAGGGGATTCTCACTGAGT +
Preference number: 6 (lower is better)
Translates to: LLHLPWDCGKSC*PLTVQRGFSLS
Trigger: ACTCAGTGAGAATCCCCTCTGGACAGTCAGTGGTCAGCAGCTCTTTCCACAGTCCCAGGGTAAGTGAAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS GCA 72 bp CTGAGTCCAATCTCTCCTCGCACTGTTGAAGGCGCTTaGGTAGGAAATCGTTCTCCATCTGAGCACAGTCCA +
Preference number: 6 (lower is better)
Translates to: LSPISPRTVEGA*VGNRSPSEHSP
Trigger: TGGACTGTGCTCAGATGGAGAACGATTTCCTACGCAAGCGCCTTCAACAGTGCGAGGAGAGATTGGACTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS GCA 72 bp TGGCGAAGCTGCTCCAGCTGCTTGATGGTATTTTCCTaGTGGCTGTGGATCTTCTGTTGCTCAAGGGCATTG +
Preference number: 6 (lower is better)
Translates to: WRSCSSCLMVFS*WLWIFCCSRAL
Trigger: CAATGCCCTTGAGCAACAGAAGATCCACAGCCAGCAGGAAAATACCATCAAGCAGCTGGAGCAGCTTCGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS GCA 72 bp AGGAGGTCTGCTCTCTCAAACTGCAACCTGTACAGTTaGTCATCCACCAGGCTCTTGCTCCGGGTCACATTT +
Preference number: 6 (lower is better)
Translates to: RRSALSNCNLYS*SSTRLLLRVTF
Trigger: AAATGTGACCCGGAGCAAGAGCCTGGTGGATGAGCAACTGTACAGGTTGCAGTTTGAGAGAGCAGACCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CCA 72 bp CTGAGGCTCTTCTCAAACATTGACTCCCCCAGTGCCTaGGCCAGCTGCAAGTCAAACTTCTTCTGTCTCTTC +
Preference number: 6 (lower is better)
Translates to: LRLFSNIDSPSA*ASCKSNFFCLF
Trigger: GAAGAGACAGAAGAAGTTTGACTTGCAGCTGGCCCAGGCACTGGGGGAGTCAATGTTTGAGAAGAGCCTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CCA 72 bp GGACTCCAGGATGCTTCGAAGCCTCCTTCCCATCTTTaGCAGCTCCGGATGAAGGAGTATCACTCTTCCTTA +
Preference number: 6 (lower is better)
Translates to: GLQDASKPPSHL*QLRMKEYHSSL
Trigger: TAAGGAAGAGTGATACTCCTTCATCCGGAGCTGCCAAAGATGGGAAGGAGGCTTCGAAGCATCCTGGAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CAA 72 bp TGGGAAGTCTGCTGGCTTCCAGGCTTGGGGACATTGTaGGTCTTGTTGGTTTGGTTAGTTGGAACTGCTGGG +
Preference number: 6 (lower is better)
Translates to: WEVCWLPGLGTL*VLLVWLVGTAG
Trigger: CCCAGCAGTTCCAACTAACCAAACCAACAAGACCAACAATGTCCCCAAGCCTGGAAGCCAGCAGACTTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CAA 72 bp TCCCTCTGTGCCCTGACATTTCCCACCCTTTGTGCTTaGGCCTGTATCTCCAACTCCCCTAGTCCTAGTCTT +
Preference number: 6 (lower is better)
Translates to: SLCALTFPTLCA*ACISNSPSPSL
Trigger: AAGACTAGGACTAGGGGAGTTGGAGATACAGGCCAAAGCACAAAGGGTGGGAAATGTCAGGGCACAGAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CAA 72 bp ATATTCCTGGCGAGACAGAAAGCCCCTACAGGCTGCTaGGAAGAGAACGATATTCCGGGACACCAGCTTCTC +
Preference number: 6 (lower is better)
Translates to: IFLARQKAPTGC*EENDIPGHQLL
Trigger: GAGAAGCTGGTGTCCCGGAATATCGTTCTCTTCCAAGCAGCCTGTAGGGGCTTTCTGTCTCGCCAGGAATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CAA 72 bp TGGACTCCAGGATGCTTCGAAGCCTCCTTCCCATCTTaGGCAGCTCCGGATGAAGGAGTATCACTCTTCCTT +
Preference number: 6 (lower is better)
Translates to: WTPGCFEASFPS*AAPDEGVSLFL
Trigger: AAGGAAGAGTGATACTCCTTCATCCGGAGCTGCCAAAGATGGGAAGGAGGCTTCGAAGCATCCTGGAGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CAA 90 bp TGGGAAGTCTGCTGGCTTCCAGGCTTGGGGACATTGTTGGTCTTGTaGGTTTGGTTAGTTGGAACTGCTGGGATCTCTACTTCTGGGGCT +
Preference number: 6 (lower is better)
Translates to: WEVCWLPGLGTLLVL*VWLVGTAGISTSGA
Trigger: AGCCCCAGAAGTAGAGATCCCAGCAGTTCCAACTAACCAAACCAACAAGACCAACAATGTCCCCAAGCCTGGAAGCCAGCAGACTTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CAA 90 bp TCCTGGGAAGTCTGCTGGCTTCCAGGCTTGGGGACATTGTTGGTCTaGTTGGTTTGGTTAGTTGGAACTGCTGGGATCTCTACTTCTGGG +
Preference number: 6 (lower is better)
Translates to: SWEVCWLPGLGTLLV*LVWLVGTAGISTSG
Trigger: CCCAGAAGTAGAGATCCCAGCAGTTCCAACTAACCAAACCAACAAGACCAACAATGTCCCCAAGCCTGGAAGCCAGCAGACTTCCCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CAA 90 bp CTGCTGTGCCTCCTCCAGCTGCTTCTGAACTTCCCCCAATGCATCTaGCACTTGCTGATACTTAGTCTTGAGTTCCTGAACCTCTCGGAG +
Preference number: 6 (lower is better)
Translates to: LLCLLQLLLNFPQCI*HLLILSLEFLNLSE
Trigger: CTCCGAGAGGTTCAGGAACTCAAGACTAAGTATCAGCAAGTGCAAGATGCATTGGGGGAAGTTCAGAAGCAGCTGGAGGAGGCACAGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CAA 90 bp GCTCTCTCAAACTGCAACCTGTACAGTTGCTCATCCACCAGGCTCTaGCTCCGGGTCACATTTTCCAGTTCACTGTGCATGTTCTCCAGG +
Preference number: 6 (lower is better)
Translates to: ALSNCNLYSCSSTRL*LRVTFSSSLCMFSR
Trigger: CCTGGAGAACATGCACAGTGAACTGGAAAATGTGACCCGGAGCAAGAGCCTGGTGGATGAGCAACTGTACAGGTTGCAGTTTGAGAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CAA 90 bp AATGCGCTTCAGGAGGTCTGCTCTCTCAAACTGCAACCTGTACAGTaGCTCATCCACCAGGCTCTTGCTCCGGGTCACATTTTCCAGTTC +
Preference number: 6 (lower is better)
Translates to: NALQEVCSLKLQPVQ*LIHQALAPGHIFQF
Trigger: GAACTGGAAAATGTGACCCGGAGCAAGAGCCTGGTGGATGAGCAACTGTACAGGTTGCAGTTTGAGAGAGCAGACCTCCTGAAGCGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS TCA 72 bp GGCCACATCTCCTTTGAAGCGTTCATCAGCAAGCTCTaGGGTCAAGTCTGTGATCTTGCTCTCCAGCAAGTC +
Preference number: 6 (lower is better)
Translates to: GHISFEAFISKL*GQVCDLALQQV
Trigger: GACTTGCTGGAGAGCAAGATCACAGACTTGACCTCAGAGCTTGCTGATGAACGCTTCAAAGGAGATGTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS GCA 72 bp GCTTCTTTGGACTCTTTCTCTGTCTCTCGAACCAGCTaGTTGATGAAGCCCCCAGGGATGACAGAGAACAAG +
Preference number: 6 (lower is better)
Translates to: ASLDSFSVSRTS*LMKPPGMTENK
Trigger: CTTGTTCTCTGTCATCCCTGGGGGCTTCATCAAGCAGCTGGTTCGAGAGACAGAGAAAGAGTCCAAAGAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS GCA 72 bp CTTATATTCCTGGCGAGACAGAAAGCCCCTACAGGCTaGTTGGAAGAGAACGATATTCCGGGACACCAGCTT +
Preference number: 6 (lower is better)
Translates to: LIFLARQKAPTG*LEENDIPGHQL
Trigger: AAGCTGGTGTCCCGGAATATCGTTCTCTTCCAAGCAGCCTGTAGGGGCTTTCTGTCTCGCCAGGAATATAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CCA 72 bp TGGCAGCTCCGGATGAAGGAGTATCACTCTTCCTTATaGCCGGGAGGAAGTCATCAAAGTCCACTTTGGTCT +
Preference number: 6 (lower is better)
Translates to: WQLRMKEYHSSL*PGGSHQSPLWS
Trigger: AGACCAAAGTGGACTTTGATGACTTCCTCCCGGCCATAAGGAAGAGTGATACTCCTTCATCCGGAGCTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CAA 72 bp GTCTGCTGGCTTCCAGGCTTGGGGACATTGTTGGTCTaGTTGGTTTGGTTAGTTGGAACTGCTGGGATCTCT +
Preference number: 6 (lower is better)
Translates to: VCWLPGLGTLLV*LVWLVGTAGIS
Trigger: AGAGATCCCAGCAGTTCCAACTAACCAAACCAACAAGACCAACAATGTCCCCAAGCCTGGAAGCCAGCAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CAA 72 bp AACTGCAACCTGTACAGTTGCTCATCCACCAGGCTCTaGCTCCGGGTCACATTTTCCAGTTCACTGTGCATG +
Preference number: 6 (lower is better)
Translates to: NCNLYSCSSTRL*LRVTFSSSLCM
Trigger: CATGCACAGTGAACTGGAAAATGTGACCCGGAGCAAGAGCCTGGTGGATGAGCAACTGTACAGGTTGCAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS GCA 72 bp CTGTGCCTCCTCCAGCTGCTTCTGAACTTCCCCCAATaGATCTTGCACTTGCTGATACTTAGTCTTGAGTTC +
Preference number: 6 (lower is better)
Translates to: LCLLQLLLNFPQ*ILHLLILSLEF
Trigger: GAACTCAAGACTAAGTATCAGCAAGTGCAAGATGCATTGGGGGAAGTTCAGAAGCAGCTGGAGGAGGCACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CCA 72 bp ATTGTTGGTCTTGTTGGTTTGGTTAGTTGGAACTGCTaGGATCTCTACTTCTGGGGCTGTGAATGCTGCCGC +
Preference number: 6 (lower is better)
Translates to: IVGLVGLVSWNC*DLYFWGCECCR
Trigger: GCGGCAGCATTCACAGCCCCAGAAGTAGAGATCCCAGCAGTTCCAACTAACCAAACCAACAAGACCAACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CCA 72 bp CTTCCAGGCTTGGGGACATTGTTGGTCTTGTTGGTTTaGTTAGTTGGAACTGCTGGGATCTCTACTTCTGGG +
Preference number: 6 (lower is better)
Translates to: LPGLGTLLVLLV*LVGTAGISTSG
Trigger: CCCAGAAGTAGAGATCCCAGCAGTTCCAACTAACCAAACCAACAAGACCAACAATGTCCCCAAGCCTGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CCA 72 bp CAGTCTTTGACCTTCAGGAACACAGCTAGATTCTTCTaGATACACAGTGTAGCCAGCCTGCGGATCTTCAGC +
Preference number: 6 (lower is better)
Translates to: QSLTFRNTARFF*IHSVASLRIFS
Trigger: GCTGAAGATCCGCAGGCTGGCTACACTGTGTATCCAGAAGAATCTAGCTGTGTTCCTGAAGGTCAAAGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CAA 72 bp TGCTGGCTTCCAGGCTTGGGGACATTGTTGGTCTTGTaGGTTTGGTTAGTTGGAACTGCTGGGATCTCTACT +
Preference number: 6 (lower is better)
Translates to: CWLPGLGTLLVL*VWLVGTAGIST
Trigger: AGTAGAGATCCCAGCAGTTCCAACTAACCAAACCAACAAGACCAACAATGTCCCCAAGCCTGGAAGCCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CAA 72 bp CGTTCATCAGCAAGCTCTGAGGTCAAGTCTGTGATCTaGCTCTCCAGCAAGTCTGTGTTCTGTCTGAGCTCA +
Preference number: 6 (lower is better)
Translates to: RSSASSEVKSVI*LSSKSVFCLSS
Trigger: TGAGCTCAGACAGAACACAGACTTGCTGGAGAGCAAGATCACAGACTTGACCTCAGAGCTTGCTGATGAACG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS TCA 72 bp TCCTTACGATGTGACTCTGTTACTCTGTCCTTGCTCTaGGGACTGTCCCACTTGCTTCTCCAACCCAAGAAA +
Preference number: 6 (lower is better)
Translates to: SLRCDSVTLSLL*GLSHLLLQPKK
Trigger: TTTCTTGGGTTGGAGAAGCAAGTGGGACAGTCCTCAGAGCAAGGACAGAGTAACAGAGTCACATCGTAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS TCA 72 bp CTGAATGGGTCGCTGTCCAGAGTTTCTTCCATCAGGTaGGAAAATTGTCGATTCTGGAAGACCAGAGGTTCC +
Preference number: 6 (lower is better)
Translates to: LNGSLSRVSSIR*ENCRFWKTRGS
Trigger: GGAACCTCTGGTCTTCCAGAATCGACAATTTTCTCACCTGATGGAAGAAACTCTGGACAGCGACCCATTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS GCA 72 bp GACATTGTTGGTCTTGTTGGTTTGGTTAGTTGGAACTaGTGGGATCTCTACTTCTGGGGCTGTGAATGCTGC +
Preference number: 6 (lower is better)
Translates to: DIVGLVGLVSWN*WDLYFWGCECC
Trigger: GCAGCATTCACAGCCCCAGAAGTAGAGATCCCAGCAGTTCCAACTAACCAAACCAACAAGACCAACAATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CAA 72 bp GTCGCTGTCCAGAGTTTCTTCCATCAGGTGAGAAAATaGTCGATTCTGGAAGACCAGAGGTTCCTTCCCAAG +
Preference number: 6 (lower is better)
Translates to: VAVQSFFHQVRK*SILEDQRFLPK
Trigger: CTTGGGAAGGAACCTCTGGTCTTCCAGAATCGACAATTTTCTCACCTGATGGAAGAAACTCTGGACAGCGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11
CDS CCA 72 bp ATGACCAGCACCTCAAATCTTTTTATCTGCACCTTCTaGAATTCGGTCTTGTTCTCCAGGTCACAGATGATG +
Preference number: 6 (lower is better)
Translates to: MTSTSNLFICTF*NSVLFSRSQMM
Trigger: CATCATCTGTGACCTGGAGAACAAGACCGAATTCCAGAAGGTGCAGATAAAAAGATTTGAGGTGCTGGTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000086617.11