RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MYO18A (Mus musculus)

Ensembl gene IDs: ENSMUSG00000000631

Ensembl transcript IDs: ENSMUST00000000645.13, ENSMUST00000092884.11, ENSMUST00000092887.11, ENSMUST00000100794.10, ENSMUST00000102488.8, ENSMUST00000108375.9, ENSMUST00000108376.9, ENSMUST00000130305.9, ENSMUST00000130627.9, ENSMUST00000135375.4, ENSMUST00000151373.4, ENSMUST00000164334.8, ENSMUST00000167856.8, ENSMUST00000168348.8, ENSMUST00000169105.8, ENSMUST00000172303.10

Found 2717 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGCTCGGTCCAAGCCAGAAGCACCCAGCTGCCATCCTCCCCACCCTaGCTCCAAAGAACCAGGGCCCCGGCTCTGCTAACCGCTGTCCCC +
Preference number: 1 (lower is better)
Translates to: GSVQARSTQLPSSPP*LQRTRAPALLTAVP
Trigger: GGGGACAGCGGTTAGCAGAGCCGGGGCCCTGGTTCTTTGGAGGCAGGGTGGGGAGGATGGCAGCTGGGTGCTTCTGGCTTGGACCGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
3UTR TCA 90 bp GTGGTGCCCCTCTATCCTGGGAGAGGCTGTGGGGTGGGAGAGTCGTaGGCCATCCCAGGCTATGCACTGGTCTCTGTCAGCTTGGCCTCT +
Preference number: 1 (lower is better)
Translates to: VVPLYPGRGCGVGES*AIPGYALVSVSLAS
Trigger: AGAGGCCAAGCTGACAGAGACCAGTGCATAGCCTGGGATGGCTCACGACTCTCCCACCCCACAGCCTCTCCCAGGATAGAGGGGCACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
3UTR GCA 90 bp CAAGAGCGGAAGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTaGCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCT +
Preference number: 1 (lower is better)
Translates to: QERKLSLERLCFAHL*RVELSDAHSLESPP
Trigger: AGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCTTCCGCTCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
3UTR CCA 90 bp GGAAGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTaGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAA +
Preference number: 1 (lower is better)
Translates to: GSSLWRDSASPTSAA*SCQTPTAWKVPLTE
Trigger: TTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
3UTR TCA 90 bp CTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTaGCAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTG +
Preference number: 1 (lower is better)
Translates to: LPRGAVRRPQPGKSP*QKAKVFSMQIGSQV
Trigger: CACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
3UTR CCA 90 bp GCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTaGAAAGTCCCCCTGACAGAAAGCCAAGGTGTTTTCCATGCAGAT +
Preference number: 1 (lower is better)
Translates to: ASPTSAAWSCQTPTA*KVPLTESQGVFHAD
Trigger: ATCTGCATGGAAAACACCTTGGCTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
3UTR CCA 90 bp GAGGCTGTGGGGTGGGAGAGTCGTGAGCCATCCCAGGCTATGCACTaGTCTCTGTCAGCTTGGCCTCTGTGTCGCTGTCACTCAGATAGC +
Preference number: 1 (lower is better)
Translates to: EAVGWESREPSQAMH*SLSAWPLCRCHSDS
Trigger: GCTATCTGAGTGACAGCGACACAGAGGCCAAGCTGACAGAGACCAGTGCATAGCCTGGGATGGCTCACGACTCTCCCACCCCACAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
3UTR GCA 90 bp TGTCGCTGTCACTCAGATAGCTGTGGGAGAACCGGGGTCTGGAGATaGTGTCCACAGGATCATGCTCATCATCCGATGGGTCAGGGGCGA +
Preference number: 1 (lower is better)
Translates to: CRCHSDSCGRTGVWR*CPQDHAHHPMGQGR
Trigger: TCGCCCCTGACCCATCGGATGATGAGCATGATCCTGTGGACAGCATCTCCAGACCCCGGTTCTCCCACAGCTATCTGAGTGACAGCGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
3UTR CCA 90 bp CCTCTGTGTCGCTGTCACTCAGATAGCTGTGGGAGAACCGGGGTCTaGAGATGCTGTCCACAGGATCATGCTCATCATCCGATGGGTCAG +
Preference number: 1 (lower is better)
Translates to: PLCRCHSDSCGRTGV*RCCPQDHAHHPMGQ
Trigger: CTGACCCATCGGATGATGAGCATGATCCTGTGGACAGCATCTCCAGACCCCGGTTCTCCCACAGCTATCTGAGTGACAGCGACACAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
3UTR CCA 90 bp CAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGTACAAAGCAATaGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTAC +
Preference number: 1 (lower is better)
Translates to: QSGPQGEHSPMSTKQ*QKGRGMANRSSTRY
Trigger: GTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGTACTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
3UTR TCA 90 bp TTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATaGGTACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGT +
Preference number: 1 (lower is better)
Translates to: LFPYINQVHRESTAQ*VQSNGRREGGWQTG
Trigger: ACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGTACTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
3UTR CCA 90 bp GTAACAAGTAACAGACCACTTGTTGCTGTGTCTGGGGTAAGTGTGTaGGGACAGGGTTATGGGCAGAAGAAAGATGACAAAGGGTTAGGA +
Preference number: 1 (lower is better)
Translates to: VTSNRPLVAVSGVSV*GQGYGQKKDDKGLG
Trigger: TCCTAACCCTTTGTCATCTTTCTTCTGCCCATAACCCTGTCCCCACACACTTACCCCAGACACAGCAACAAGTGGTCTGTTACTTGTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
3UTR-3UTR CCA 90 bp CGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCGGTGCCCCTCTATCCTaGGAGAGGCTGTGGGGTGGG +
Preference number: 2 (lower is better)
Translates to: RPPLPRGAVRRPQPGKSPGAPLS*ERLWGG
Trigger: CCCACCCCACAGCCTCTCCCAGGATAGAGGGGCACC...GGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
3UTR-3UTR CCA 90 bp CGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCGGAGAGGCTGTGGGGTaGGAGAGTCGTGAGCCATCC +
Preference number: 2 (lower is better)
Translates to: RPPLPRGAVRRPQPGKSPGEAVG*ESREPS
Trigger: GGATGGCTCACGACTCTCCCACCCCACAGCCTCTCC...GGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
3UTR-3UTR CCA 90 bp CGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTCCTGGGAGAGGCTGTaGGGTGGGAGAGTCGTGAGC +
Preference number: 2 (lower is better)
Translates to: RPPLPRGAVRRPQPGKSPSWERL*GGRVVS
Trigger: GCTCACGACTCTCCCACCCCACAGCCTCTCCCAGGA...GGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
3UTR-3UTR CCA 90 bp CGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCAGATCGGCAGTCAGGTaGGGGCAGTGGTGCCCCTCT +
Preference number: 2 (lower is better)
Translates to: RPPLPRGAVRRPQPGKSPRSAVR*GQWCPS
Trigger: AGAGGGGCACCACTGCCCCCACCTGACTGCCGATCT...GGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
3UTR-3UTR CCA 90 bp CTCCCCACCCTGCCTCCAAAGAACCAGGGCCCCGGCTCTGCTAACCGCTGTCCCTCCTGGGAGAGGCTGTaGGGTGGGAGAGTCGTGAGC +
Preference number: 2 (lower is better)
Translates to: LPTLPPKNQGPGSANRCPSWERL*GGRVVS
Trigger: GCTCACGACTCTCCCACCCCACAGCCTCTCCCAGGA...GGGACAGCGGTTAGCAGAGCCGGGGCCCTGGTTCTTTGGAGGCAGGGTGGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
3UTR-3UTR CCA 90 bp GCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCGGAGAGGCTGTGGGGTaGGAGAGTCGTGAGCCATCC +
Preference number: 2 (lower is better)
Translates to: ASPTSAAWSCQTPTAWKVGEAVG*ESREPS
Trigger: GGATGGCTCACGACTCTCCCACCCCACAGCCTCTCC...GACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
3UTR-3UTR CCA 90 bp GCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCTCCTGGGAGAGGCTGTaGGGTGGGAGAGTCGTGAGC +
Preference number: 2 (lower is better)
Translates to: ASPTSAAWSCQTPTAWKVSWERL*GGRVVS
Trigger: GCTCACGACTCTCCCACCCCACAGCCTCTCCCAGGA...GACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
3UTR-3UTR CCA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAGGTGCCCCTCTATCCTaGGAGAGGCTGTGGGGTGGG +
Preference number: 2 (lower is better)
Translates to: LCRVELSDAHSLESPPDRGAPLS*ERLWGG
Trigger: CCCACCCCACAGCCTCTCCCAGGATAGAGGGGCACC...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
3UTR-3UTR CCA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCAGATCGGCAGTCAGGTaGGGGCAGTGGTGCCCCTCT +
Preference number: 2 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSRSAVR*GQWCPS
Trigger: AGAGGGGCACCACTGCCCCCACCTGACTGCCGATCT...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
3UTR-3UTR CCA 90 bp AGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGAGATCGGCAGTCAGGTaGGGGCAGTGGTGCCCCTCT +
Preference number: 2 (lower is better)
Translates to: RLCFAHLCRVELSDAHSLRSAVR*GQWCPS
Trigger: AGAGGGGCACCACTGCCCCCACCTGACTGCCGATCT...CAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
3UTR-3UTR GCA 90 bp AGGCAGGCAGAGCTGGAAGCCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTCCAGAAGCACCCAGCTaGCATCCTCCCCACCCTGCC +
Preference number: 2 (lower is better)
Translates to: RQAELEAAGGCRWKRSALPEAPS*HPPHPA
Trigger: GGCAGGGTGGGGAGGATGGCAGCTGGGTGCTTCTGG...AAGAGCTGATCTCTTCCACCTGCACCCACCCGCGGCTTCCAGCTCTGCCTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
3UTR-3UTR CCA 90 bp CTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCGGAGAGGCTGTGGGGTaGGAGAGTCGTGAGCCATCC +
Preference number: 2 (lower is better)
Translates to: LWRDSASPTSAAWSCQTPGEAVG*ESREPS
Trigger: GGATGGCTCACGACTCTCCCACCCCACAGCCTCTCC...GGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
3UTR-3UTR CCA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAGGAGAGGCTGTGGGGTaGGAGAGTCGTGAGCCATCC +
Preference number: 2 (lower is better)
Translates to: LCRVELSDAHSLESPPDRGEAVG*ESREPS
Trigger: GGATGGCTCACGACTCTCCCACCCCACAGCCTCTCC...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
3UTR-3UTR CCA 90 bp TGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTTCCTGGGAGAGGCTGTaGGGTGGGAGAGTCGTGAGC +
Preference number: 2 (lower is better)
Translates to: CFAHLCRVELSDAHSLESSWERL*GGRVVS
Trigger: GCTCACGACTCTCCCACCCCACAGCCTCTCCCAGGA...ACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
3UTR-3UTR CCA 90 bp TTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCAGGTGCCCCTCTATCCTaGGAGAGGCTGTGGGGTGGG +
Preference number: 2 (lower is better)
Translates to: FGETLLRPPLPRGAVRRPGAPLS*ERLWGG
Trigger: CCCACCCCACAGCCTCTCCCAGGATAGAGGGGCACC...TGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
3UTR-3UTR CCA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCGGTGCCCCTCTATCCTaGGAGAGGCTGTGGGGTGGG +
Preference number: 2 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRGAPLS*ERLWGG
Trigger: CCCACCCCACAGCCTCTCCCAGGATAGAGGGGCACC...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
3UTR-3UTR CCA 90 bp TGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGGGTGCCCCTCTATCCTaGGAGAGGCTGTGGGGTGGG +
Preference number: 2 (lower is better)
Translates to: CRVELSDAHSLESPPDRKGAPLS*ERLWGG
Trigger: CCCACCCCACAGCCTCTCCCAGGATAGAGGGGCACC...CTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
3UTR-3UTR CCA 90 bp TCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCGGTGCCCCTCTATCCTaGGAGAGGCTGTGGGGTGGG +
Preference number: 2 (lower is better)
Translates to: SLERLCFAHLCRVELSDAGAPLS*ERLWGG
Trigger: CCCACCCCACAGCCTCTCCCAGGATAGAGGGGCACC...GGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
3UTR-3UTR CCA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAGATCGGCAGTCAGGTaGGGGCAGTGGTGCCCCTCT +
Preference number: 2 (lower is better)
Translates to: LCRVELSDAHSLESPPDRRSAVR*GQWCPS
Trigger: AGAGGGGCACCACTGCCCCCACCTGACTGCCGATCT...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
3UTR-3UTR CCA 90 bp TGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTAGATCGGCAGTCAGGTaGGGGCAGTGGTGCCCCTCT +
Preference number: 2 (lower is better)
Translates to: CFAHLCRVELSDAHSLESRSAVR*GQWCPS
Trigger: AGAGGGGCACCACTGCCCCCACCTGACTGCCGATCT...ACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
3UTR-3UTR CCA 90 bp CCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGCAGACGCCCACAGCCTaGAAAGTCCCCCTGACAGAA +
Preference number: 2 (lower is better)
Translates to: PTSAAWSCQTPTAWKVPLQTPTA*KVPLTE
Trigger: TTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTG...CAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
3UTR-3UTR GCA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCTCTTTGGAGAGACTCTaGTTCGCCCACCTCTGCCGC +
Preference number: 2 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSSLERL*FAHLCR
Trigger: GCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGA...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
3UTR-3UTR GCA 90 bp CGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCAGCCATCCCAGGCTATaGACTGGTCTCTGTCAGCTT +
Preference number: 2 (lower is better)
Translates to: RPPLPRGAVRRPQPGKSPSHPRL*TGLCQL
Trigger: AAGCTGACAGAGACCAGTGCATAGCCTGGGATGGCT...GGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
3UTR-3UTR CCA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCTCCTGGGAGAGGCTGTaGGGTGGGAGAGTCGTGAGC +
Preference number: 2 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRSWERL*GGRVVS
Trigger: GCTCACGACTCTCCCACCCCACAGCCTCTCCCAGGA...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
3UTR-3UTR CCA 90 bp TCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAATCCTGGGAGAGGCTGTaGGGTGGGAGAGTCGTGAGC +
Preference number: 2 (lower is better)
Translates to: SAAWSCQTPTAWKVPLTESWERL*GGRVVS
Trigger: GCTCACGACTCTCCCACCCCACAGCCTCTCCCAGGA...TTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
3UTR-3UTR CCA 90 bp TCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCTCCTGGGAGAGGCTGTaGGGTGGGAGAGTCGTGAGC +
Preference number: 2 (lower is better)
Translates to: SLERLCFAHLCRVELSDASWERL*GGRVVS
Trigger: GCTCACGACTCTCCCACCCCACAGCCTCTCCCAGGA...GGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
3UTR-3UTR CCA 90 bp TTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCATCCTGGGAGAGGCTGTaGGGTGGGAGAGTCGTGAGC +
Preference number: 2 (lower is better)
Translates to: FGETLLRPPLPRGAVRRPSWERL*GGRVVS
Trigger: GCTCACGACTCTCCCACCCCACAGCCTCTCCCAGGA...TGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
3UTR-3UTR CCA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGGGTGCCCCTCTATCCTaGGAGAGGCTGTGGGGTGGG +
Preference number: 2 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQGAPLS*ERLWGG
Trigger: CCCACCCCACAGCCTCTCCCAGGATAGAGGGGCACC...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
3UTR-3UTR CCA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCAGATCGGCAGTCAGGTaGGGGCAGTGGTGCCCCTCT +
Preference number: 2 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRRSAVR*GQWCPS
Trigger: AGAGGGGCACCACTGCCCCCACCTGACTGCCGATCT...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
3UTR-3UTR CCA 90 bp TCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCAGATCGGCAGTCAGGTaGGGGCAGTGGTGCCCCTCT +
Preference number: 2 (lower is better)
Translates to: SLERLCFAHLCRVELSDARSAVR*GQWCPS
Trigger: AGAGGGGCACCACTGCCCCCACCTGACTGCCGATCT...GGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
3UTR-3UTR CCA 90 bp CCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGAGCGGAAGCTCTCTTTaGAGAGACTCTGCTTCGCCC +
Preference number: 2 (lower is better)
Translates to: PTSAAWSCQTPTAWKVPLSGSSL*RDSASP
Trigger: GGGCGAAGCAGAGTCTCTCCAAAGAGAGCTTCCGCT...CAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
3UTR-3UTR CCA 90 bp AGGCAGGCAGAGCTGGAAGCCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTAGCAGGAGGCTGAGATaGAGGTCCACCACCGGCTCC +
Preference number: 2 (lower is better)
Translates to: RQAELEAAGGCRWKRSALSRRLR*RSTTGS
Trigger: GGAGCCGGTGGTGGACCTCCATCTCAGCCTCCTGCT...AAGAGCTGATCTCTTCCACCTGCACCCACCCGCGGCTTCCAGCTCTGCCTGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
3UTR-3UTR CCA 90 bp AAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCTCCTGGGAGAGGCTGTaGGGTGGGAGAGTCGTGAGC +
Preference number: 2 (lower is better)
Translates to: KPRCFPCRSAVRWGQWCPSWERL*GGRVVS
Trigger: GCTCACGACTCTCCCACCCCACAGCCTCTCCCAGGA...GGGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
3UTR-3UTR CCA 90 bp GCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGATCCTGGGAGAGGCTGTaGGGTGGGAGAGTCGTGAGC +
Preference number: 2 (lower is better)
Translates to: ALFGETLLRPPLPRGAVRSWERL*GGRVVS
Trigger: GCTCACGACTCTCCCACCCCACAGCCTCTCCCAGGA...TCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
3UTR-3UTR CCA 90 bp CTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACAGATCGGCAGTCAGGTaGGGGCAGTGGTGCCCCTCT +
Preference number: 2 (lower is better)
Translates to: LSLERLCFAHLCRVELSDRSAVR*GQWCPS
Trigger: AGAGGGGCACCACTGCCCCCACCTGACTGCCGATCT...GTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
3UTR-3UTR CCA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCAGCGGAAGCTCTCTTTaGAGAGACTCTGCTTCGCCC +
Preference number: 2 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSSGSSL*RDSASP
Trigger: GGGCGAAGCAGAGTCTCTCCAAAGAGAGCTTCCGCT...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
3UTR-3UTR CCA 90 bp GCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCAGCGGAAGCTCTCTTTaGAGAGACTCTGCTTCGCCC +
Preference number: 2 (lower is better)
Translates to: ASPTSAAWSCQTPTAWKVSGSSL*RDSASP
Trigger: GGGCGAAGCAGAGTCTCTCCAAAGAGAGCTTCCGCT...GACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
3UTR-3UTR CCA 90 bp CTCCCCACCCTGCCTCCAAAGAACCAGGGCCCCGGCTCTGCTAACCGCTGTCCCGGAGAAAAGGGCCTCTaGAGAAGTGAAGATGGAGGG +
Preference number: 2 (lower is better)
Translates to: LPTLPPKNQGPGSANRCPGEKGL*RSEDGG
Trigger: CCCTCCATCTTCACTTCTCCAGAGGCCCTTTTCTCC...GGGACAGCGGTTAGCAGAGCCGGGGCCCTGGTTCTTTGGAGGCAGGGTGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
3UTR-3UTR CCA 90 bp GCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCTAGAGGCAGGCAGAGCTaGAAGCCGCGGGTGGGTGCA +
Preference number: 2 (lower is better)
Translates to: AMAEGKGDGKQVQHQVLPRGRQS*KPRVGA
Trigger: TGCACCCACCCGCGGCTTCCAGCTCTGCCTGCCTCT...AGGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
3UTR-3UTR CCA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGTGGGTCAGGGGCGAGTaGCTTCCAGTGGCTGGTTGG +
Preference number: 2 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQWVRGE*LPVAGW
Trigger: CCAACCAGCCACTGGAAGCCACTCGCCCCTGACCCA...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
3UTR-3UTR GCA 90 bp TCTGGGGTAAGTGTGTGGGGACAGGGTTATGGGCAGAAGAAAGATGACAAAGGGCCCACAGGCCCCAGCTaGAGCGGCAGCCCCTCCCAC +
Preference number: 2 (lower is better)
Translates to: SGVSVWGQGYGQKKDDKGPTGPS*SGSPSH
Trigger: GTGGGAGGGGCTGCCGCTGCAGCTGGGGCCTGTGGG...CCCTTTGTCATCTTTCTTCTGCCCATAACCCTGTCCCCACACACTTACCCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
3UTR-3UTR CCA 90 bp AAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCGGAGAGGCTGTGGGGTaGGAGAGTCGTGAGCCATCC +
Preference number: 2 (lower is better)
Translates to: KAKVFSMQIGSQVGAVVPGEAVG*ESREPS
Trigger: GGATGGCTCACGACTCTCCCACCCCACAGCCTCTCC...GGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
3UTR-3UTR CCA 90 bp AAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCTCCTGGGAGAGGCTGTaGGGTGGGAGAGTCGTGAGC +
Preference number: 2 (lower is better)
Translates to: KAKVFSMQIGSQVGAVVPSWERL*GGRVVS
Trigger: GCTCACGACTCTCCCACCCCACAGCCTCTCCCAGGA...GGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
3UTR-3UTR CCA 90 bp GCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCTAGATCGGCAGTCAGGTaGGGGCAGTGGTGCCCCTCT +
Preference number: 2 (lower is better)
Translates to: AMAEGKGDGKQVQHQVLPRSAVR*GQWCPS
Trigger: AGAGGGGCACCACTGCCCCCACCTGACTGCCGATCT...AGGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
3UTR-3UTR CCA 90 bp AGGCAGGCAGAGCTGGAAGCCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTCAGACGCCCACAGCCTaGAAAGTCCCCCTGACAGAA +
Preference number: 2 (lower is better)
Translates to: RQAELEAAGGCRWKRSALQTPTA*KVPLTE
Trigger: TTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTG...AAGAGCTGATCTCTTCCACCTGCACCCACCCGCGGCTTCCAGCTCTGCCTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
3UTR-3UTR CCA 90 bp TGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTAGCGGAAGCTCTCTTTaGAGAGACTCTGCTTCGCCC +
Preference number: 2 (lower is better)
Translates to: CFAHLCRVELSDAHSLESSGSSL*RDSASP
Trigger: GGGCGAAGCAGAGTCTCTCCAAAGAGAGCTTCCGCT...ACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
3UTR-3UTR CCA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAGCGGAAGCTCTCTTTaGAGAGACTCTGCTTCGCCC +
Preference number: 2 (lower is better)
Translates to: LCRVELSDAHSLESPPDRSGSSL*RDSASP
Trigger: GGGCGAAGCAGAGTCTCTCCAAAGAGAGCTTCCGCT...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
3UTR-3UTR CCA 90 bp CTCTGGAGAAGTGAAGATGGAGGGGAGATTCCCAAGGCATCCCACAGGCCCCAGAGCAGGAGGCTGAGATaGAGGTCCACCACCGGCTCC +
Preference number: 2 (lower is better)
Translates to: LWRSEDGGEIPKASHRPQSRRLR*RSTTGS
Trigger: GGAGCCGGTGGTGGACCTCCATCTCAGCCTCCTGCT...CTGGGGCCTGTGGGATGCCTTGGGAATCTCCCCTCCATCTTCACTTCTCCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
3UTR-3UTR TCA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGACCTGGAAAGTCCCCCTaGCAGAAAGCCAAGGTGTTT +
Preference number: 2 (lower is better)
Translates to: LCRVELSDAHSLESPPDRPGKSP*QKAKVF
Trigger: AAACACCTTGGCTTTCTGTCAGGGGGACTTTCCAGG...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
3UTR-3UTR TCA 90 bp AGAAGTGAAGATGGAGGGGAGATTCCCAAGGCATCCCACAGGCCCCAGCTGCAGATCACTGCTCCCTCCTaGCTCTTTCCCATGGGGCCC +
Preference number: 2 (lower is better)
Translates to: RSEDGGEIPKASHRPQLQITAPS*LFPMGP
Trigger: GGGCCCCATGGGAAAGAGTCAGGAGGGAGCAGTGAT...CTGCAGCTGGGGCCTGTGGGATGCCTTGGGAATCTCCCCTCCATCTTCACTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
3UTR-3UTR GCA 90 bp GCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCTGAAGCCGCGGGTGGGTaGAGGTGGAAGAGATCAGCT +
Preference number: 2 (lower is better)
Translates to: AMAEGKGDGKQVQHQVLPEAAGG*RWKRSA
Trigger: AGCTGATCTCTTCCACCTGCACCCACCCGCGGCTTC...AGGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
3UTR-3UTR CCA 90 bp CAGATAGCTGTGGGAGAACCGGGGTCTGGAGATGCTGTCCACAGGATCATGCTCTCCTGGGAGAGGCTGTaGGGTGGGAGAGTCGTGAGC +
Preference number: 2 (lower is better)
Translates to: QIAVGEPGSGDAVHRIMLSWERL*GGRVVS
Trigger: GCTCACGACTCTCCCACCCCACAGCCTCTCCCAGGA...GAGCATGATCCTGTGGACAGCATCTCCAGACCCCGGTTCTCCCACAGCTATCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
3UTR-3UTR CCA 90 bp AGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCCCTGACTCTTTCCCATaGGGCCCAGCGACTTCGAGC +
Preference number: 2 (lower is better)
Translates to: SNGRREGGWQTGPAPGTAPDSFP*GPATSS
Trigger: GCTCGAAGTCGCTGGGCCCCATGGGAAAGAGTCAGG...GGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
3UTR-3UTR CCA 90 bp ACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACAGAGGCAGGCAGAGCTaGAAGCCGCGGGTGGGTGCA +
Preference number: 2 (lower is better)
Translates to: TKQWQKGRGMANRSSTRYRGRQS*KPRVGA
Trigger: TGCACCCACCCGCGGCTTCCAGCTCTGCCTGCCTCT...GTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
3UTR-3UTR TCA 90 bp TCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCCTGGAAAGTCCCCCTaGCAGAAAGCCAAGGTGTTT +
Preference number: 2 (lower is better)
Translates to: SLERLCFAHLCRVELSDAPGKSP*QKAKVF
Trigger: AAACACCTTGGCTTTCTGTCAGGGGGACTTTCCAGG...GGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
3UTR-3UTR GCA 90 bp CTCTGGAGAAGTGAAGATGGAGGGGAGATTCCCAAGGCATCCCACAGGCCCCAGTCTTTGGAGAGACTCTaGTTCGCCCACCTCTGCCGC +
Preference number: 2 (lower is better)
Translates to: LWRSEDGGEIPKASHRPQSLERL*FAHLCR
Trigger: GCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGA...CTGGGGCCTGTGGGATGCCTTGGGAATCTCCCCTCCATCTTCACTTCTCCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
3UTR-3UTR GCA 90 bp TTAGGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCCCACAGGCCCCAGCTaGAGCGGCAGCCCCTCCCAC +
Preference number: 2 (lower is better)
Translates to: LGLQSDKQTKTSTFHCAHPTGPS*SGSPSH
Trigger: GTGGGAGGGGCTGCCGCTGCAGCTGGGGCCTGTGGG...GTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
3UTR-3UTR GCA 90 bp TCTGGGGTAAGTGTGTGGGGACAGGGTTATGGGCAGAAGAAAGATGACAAAGGGCCAGAAGCACCCAGCTaGCATCCTCCCCACCCTGCC +
Preference number: 2 (lower is better)
Translates to: SGVSVWGQGYGQKKDDKGPEAPS*HPPHPA
Trigger: GGCAGGGTGGGGAGGATGGCAGCTGGGTGCTTCTGG...CCCTTTGTCATCTTTCTTCTGCCCATAACCCTGTCCCCACACACTTACCCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
3UTR-3UTR CCA 90 bp TCTGGGGTAAGTGTGTGGGGACAGGGTTATGGGCAGAAGAAAGATGACAAAGGGAGAGGCAGGCAGAGCTaGAAGCCGCGGGTGGGTGCA +
Preference number: 2 (lower is better)
Translates to: SGVSVWGQGYGQKKDDKGRGRQS*KPRVGA
Trigger: TGCACCCACCCGCGGCTTCCAGCTCTGCCTGCCTCT...CCCTTTGTCATCTTTCTTCTGCCCATAACCCTGTCCCCACACACTTACCCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
3UTR-3UTR TCA 90 bp CTCTGGAGAAGTGAAGATGGAGGGGAGATTCCCAAGGCATCCCACAGGCCCCAGCCTGGAAAGTCCCCCTaGCAGAAAGCCAAGGTGTTT +
Preference number: 2 (lower is better)
Translates to: LWRSEDGGEIPKASHRPQPGKSP*QKAKVF
Trigger: AAACACCTTGGCTTTCTGTCAGGGGGACTTTCCAGG...CTGGGGCCTGTGGGATGCCTTGGGAATCTCCCCTCCATCTTCACTTCTCCAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
3UTR-3UTR GCA 90 bp GAGTACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGTCTTTGGAGAGACTCTaGTTCGCCCACCTCTGCCGC +
Preference number: 2 (lower is better)
Translates to: EYKAMAEGKGDGKQVQHQSLERL*FAHLCR
Trigger: GCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGA...CTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGTACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
3UTR-3UTR CCA 90 bp TCTGGGGTAAGTGTGTGGGGACAGGGTTATGGGCAGAAGAAAGATGACAAAGGGAGATCGGCAGTCAGGTaGGGGCAGTGGTGCCCCTCT +
Preference number: 2 (lower is better)
Translates to: SGVSVWGQGYGQKKDDKGRSAVR*GQWCPS
Trigger: AGAGGGGCACCACTGCCCCCACCTGACTGCCGATCT...CCCTTTGTCATCTTTCTTCTGCCCATAACCCTGTCCCCACACACTTACCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
3UTR-3UTR CCA 90 bp GAAGGGGCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAGATCGGCAGTCAGGTaGGGGCAGTGGTGCCCCTCT +
Preference number: 2 (lower is better)
Translates to: EGAFYFLTSIRSTGRAQPRSAVR*GQWCPS
Trigger: AGAGGGGCACCACTGCCCCCACCTGACTGCCGATCT...GGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGCCCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
3UTR-3UTR CCA 90 bp GAGTACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGCAGACGCCCACAGCCTaGAAAGTCCCCCTGACAGAA +
Preference number: 2 (lower is better)
Translates to: EYKAMAEGKGDGKQVQHQQTPTA*KVPLTE
Trigger: TTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTG...CTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGTACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
3UTR-3UTR CCA 90 bp TCTGGGGTAAGTGTGTGGGGACAGGGTTATGGGCAGAAGAAAGATGACAAAGGGAGCAGGAGGCTGAGATaGAGGTCCACCACCGGCTCC +
Preference number: 2 (lower is better)
Translates to: SGVSVWGQGYGQKKDDKGSRRLR*RSTTGS
Trigger: GGAGCCGGTGGTGGACCTCCATCTCAGCCTCCTGCT...CCCTTTGTCATCTTTCTTCTGCCCATAACCCTGTCCCCACACACTTACCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
3UTR-3UTR CCA 90 bp AGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCGCGGGTGGGTGCAGGTaGAAGAGATCAGCTCTTAAA +
Preference number: 2 (lower is better)
Translates to: SNGRREGGWQTGPAPGTAAGGCR*KRSALK
Trigger: TTTAAGAGCTGATCTCTTCCACCTGCACCCACCCGC...GGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
3UTR-3UTR CCA 90 bp CTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACAGGAGAGGCAGGCAGAGCTaGAAGCCGCGGGTGGGTGCA +
Preference number: 2 (lower is better)
Translates to: LQSDKQTKTSTFHCAHHRRGRQS*KPRVGA
Trigger: TGCACCCACCCGCGGCTTCCAGCTCTGCCTGCCTCT...CCTGTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
3UTR-3UTR GCA 90 bp TCTGGGGTAAGTGTGTGGGGACAGGGTTATGGGCAGAAGAAAGATGACAAAGGGGAAGCCGCGGGTGGGTaGAGGTGGAAGAGATCAGCT +
Preference number: 2 (lower is better)
Translates to: SGVSVWGQGYGQKKDDKGEAAGG*RWKRSA
Trigger: AGCTGATCTCTTCCACCTGCACCCACCCGCGGCTTC...CCCTTTGTCATCTTTCTTCTGCCCATAACCCTGTCCCCACACACTTACCCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
3UTR-3UTR CCA 90 bp GGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACAGCAGGAGGCTGAGATaGAGGTCCACCACCGGCTCC +
Preference number: 2 (lower is better)
Translates to: GLQSDKQTKTSTFHCAHHSRRLR*RSTTGS
Trigger: GGAGCCGGTGGTGGACCTCCATCTCAGCCTCCTGCT...GTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
3UTR-3UTR CCA 90 bp TCTGGGGTAAGTGTGTGGGGACAGGGTTATGGGCAGAAGAAAGATGACAAAGGGCCTGACTCTTTCCCATaGGGCCCAGCGACTTCGAGC +
Preference number: 2 (lower is better)
Translates to: SGVSVWGQGYGQKKDDKGPDSFP*GPATSS
Trigger: GCTCGAAGTCGCTGGGCCCCATGGGAAAGAGTCAGG...CCCTTTGTCATCTTTCTTCTGCCCATAACCCTGTCCCCACACACTTACCCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
3UTR-3UTR CCA 90 bp GGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACGCTGGAAGCCGCGGGTaGGTGCAGGTGGAAGAGATC +
Preference number: 2 (lower is better)
Translates to: GLQSDKQTKTSTFHCAHHAGSRG*VQVEEI
Trigger: GATCTCTTCCACCTGCACCCACCCGCGGCTTCCAGC...GTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
3UTR-3UTR CCA 90 bp CTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGTACAAAGCAATGAGAGGCAGGCAGAGCTaGAAGCCGCGGGTGGGTGCA +
Preference number: 2 (lower is better)
Translates to: LTSIRSTGRAQPNEYKAMRGRQS*KPRVGA
Trigger: TGCACCCACCCGCGGCTTCCAGCTCTGCCTGCCTCT...CATTGCTTTGTACTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
3UTR-3UTR TCA 90 bp GGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACATCACTGCTCCCTCCTaGCTCTTTCCCATGGGGCCC +
Preference number: 2 (lower is better)
Translates to: GLQSDKQTKTSTFHCAHHITAPS*LFPMGP
Trigger: GGGCCCCATGGGAAAGAGTCAGGAGGGAGCAGTGAT...GTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
3UTR-3UTR TCA 90 bp GAGTACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGAAAGACAGCAGGCACTaGGAAGAGAAAGCCCTCACC +
Preference number: 2 (lower is better)
Translates to: EYKAMAEGKGDGKQVQHQKDSRH*EEKALT
Trigger: GGTGAGGGCTTTCTCTTCTCAGTGCCTGCTGTCTTT...CTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGTACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
3UTR-3UTR GCA 90 bp TCTGGGGTAAGTGTGTGGGGACAGGGTTATGGGCAGAAGAAAGATGACAAAGGGTCTTTGGAGAGACTCTaGTTCGCCCACCTCTGCCGC +
Preference number: 2 (lower is better)
Translates to: SGVSVWGQGYGQKKDDKGSLERL*FAHLCR
Trigger: GCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGA...CCCTTTGTCATCTTTCTTCTGCCCATAACCCTGTCCCCACACACTTACCCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
3UTR-3UTR GCA 90 bp CCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTAAATAACTGCTCATTGCACTCCCACTCTCAGGGATaGAGCTGCATGGAGGTTTGG +
Preference number: 2 (lower is better)
Translates to: PRVGAGGRDQLLNNCSLHSHSQG*SCMEVW
Trigger: CCAAACCTCCATGCAGCTGCATCCCTGAGAGTGGGA...GTGCAATGAGCAGTTATTTAAGAGCTGATCTCTTCCACCTGCACCCACCCGCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
3UTR-3UTR CCA 90 bp TTAGGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACGGTGCCCCTCTATCCTaGGAGAGGCTGTGGGGTGGG +
Preference number: 2 (lower is better)
Translates to: LGLQSDKQTKTSTFHCAHGAPLS*ERLWGG
Trigger: CCCACCCCACAGCCTCTCCCAGGATAGAGGGGCACC...GTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
3UTR-3UTR CCA 90 bp TTAGGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACAGAGGCAGGCAGAGCTaGAAGCCGCGGGTGGGTGCA +
Preference number: 2 (lower is better)
Translates to: LGLQSDKQTKTSTFHCAHRGRQS*KPRVGA
Trigger: TGCACCCACCCGCGGCTTCCAGCTCTGCCTGCCTCT...GTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
3UTR-3UTR TCA 90 bp CCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTAAATAACTGCTCATTGCACAAAGACAGCAGGCACTaGGAAGAGAAAGCCCTCACC +
Preference number: 2 (lower is better)
Translates to: PRVGAGGRDQLLNNCSLHKDSRH*EEKALT
Trigger: GGTGAGGGCTTTCTCTTCTCAGTGCCTGCTGTCTTT...GTGCAATGAGCAGTTATTTAAGAGCTGATCTCTTCCACCTGCACCCACCCGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
3UTR-3UTR CCA 90 bp GCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGCCTGACTCTTTCCCATaGGGCCCAGCGACTTCGAGC +
Preference number: 2 (lower is better)
Translates to: AFYFLTSIRSTGRAQPNEPDSFP*GPATSS
Trigger: GCTCGAAGTCGCTGGGCCCCATGGGAAAGAGTCAGG...CTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
3UTR-3UTR TCA 90 bp GAAGGGGCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCCCTGGAAAGTCCCCCTaGCAGAAAGCCAAGGTGTTT +
Preference number: 2 (lower is better)
Translates to: EGAFYFLTSIRSTGRAQPPGKSP*QKAKVF
Trigger: AAACACCTTGGCTTTCTGTCAGGGGGACTTTCCAGG...GGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGCCCCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
3UTR-3UTR GCA 90 bp GCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGTCTTTGGAGAGACTCTaGTTCGCCCACCTCTGCCGC +
Preference number: 2 (lower is better)
Translates to: AFYFLTSIRSTGRAQPNESLERL*FAHLCR
Trigger: GCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGA...CTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
3UTR-3UTR GCA 90 bp ACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTCTCAGGGATGCAGCTaGATGGAGGTTTGGGTATTT +
Preference number: 2 (lower is better)
Translates to: TKQWQKGRGMANRSSTRYSQGCS*MEVWVF
Trigger: AAATACCCAAACCTCCATGCAGCTGCATCCCTGAGA...GTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
3UTR-3UTR CCA 90 bp GGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACAGCGGAAGCTCTCTTTaGAGAGACTCTGCTTCGCCC +
Preference number: 2 (lower is better)
Translates to: GLQSDKQTKTSTFHCAHHSGSSL*RDSASP
Trigger: GGGCGAAGCAGAGTCTCTCCAAAGAGAGCTTCCGCT...GTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
3UTR-3UTR CCA 90 bp TCTGGGGTAAGTGTGTGGGGACAGGGTTATGGGCAGAAGAAAGATGACAAAGGGGGAGAAAAGGGCCTCTaGAGAAGTGAAGATGGAGGG +
Preference number: 2 (lower is better)
Translates to: SGVSVWGQGYGQKKDDKGGEKGL*RSEDGG
Trigger: CCCTCCATCTTCACTTCTCCAGAGGCCCTTTTCTCC...CCCTTTGTCATCTTTCTTCTGCCCATAACCCTGTCCCCACACACTTACCCCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
3UTR-3UTR TCA 90 bp GGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACAAAGACAGCAGGCACTaGGAAGAGAAAGCCCTCACC +
Preference number: 2 (lower is better)
Translates to: GLQSDKQTKTSTFHCAHHKDSRH*EEKALT
Trigger: GGTGAGGGCTTTCTCTTCTCAGTGCCTGCTGTCTTT...GTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
3UTR-3UTR CCA 90 bp AGCTTTATGGTAAGAAACCGAGAAGTAACAAGTAACAGACCACTTGTTGCTGTGGGTGCCCCTCTATCCTaGGAGAGGCTGTGGGGTGGG +
Preference number: 2 (lower is better)
Translates to: SFMVRNREVTSNRPLVAVGAPLS*ERLWGG
Trigger: CCCACCCCACAGCCTCTCCCAGGATAGAGGGGCACC...CACAGCAACAAGTGGTCTGTTACTTGTTACTTCTCGGTTTCTTACCATAAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
3UTR-3UTR CCA 90 bp GCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGAGCGGAAGCTCTCTTTaGAGAGACTCTGCTTCGCCC +
Preference number: 2 (lower is better)
Translates to: AFYFLTSIRSTGRAQPNESGSSL*RDSASP
Trigger: GGGCGAAGCAGAGTCTCTCCAAAGAGAGCTTCCGCT...CTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
3UTR-3UTR CCA 90 bp CTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGTACAAAGCAATGTCTGGGGTAAGTGTGTaGGGACAGGGTTATGGGCAG +
Preference number: 2 (lower is better)
Translates to: LTSIRSTGRAQPNEYKAMSGVSV*GQGYGQ
Trigger: CTGCCCATAACCCTGTCCCCACACACTTACCCCAGA...CATTGCTTTGTACTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
3UTR-3UTR TCA 90 bp GCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGCCTGGAAAGTCCCCCTaGCAGAAAGCCAAGGTGTTT +
Preference number: 2 (lower is better)
Translates to: AFYFLTSIRSTGRAQPNEPGKSP*QKAKVF
Trigger: AAACACCTTGGCTTTCTGTCAGGGGGACTTTCCAGG...CTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
3UTR-3UTR TCA 90 bp GAAGGGGCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCTGGGCAGAAGAAAGATaGCAAAGGGTTAGGACTCCA +
Preference number: 2 (lower is better)
Translates to: EGAFYFLTSIRSTGRAQPWAEER*QRVRTP
Trigger: TGGAGTCCTAACCCTTTGTCATCTTTCTTCTGCCCA...GGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGCCCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
3UTR-3UTR CCA 90 bp GAGTACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGAGGGATGCAGCTGCATaGAGGTTTGGGTATTTAAAT +
Preference number: 2 (lower is better)
Translates to: EYKAMAEGKGDGKQVQHQRDAAA*RFGYLN
Trigger: ATTTAAATACCCAAACCTCCATGCAGCTGCATCCCT...CTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGTACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
3UTR-3UTR GCA 90 bp CTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACAGGTCTCAGGGATGCAGCTaGATGGAGGTTTGGGTATTT +
Preference number: 2 (lower is better)
Translates to: LQSDKQTKTSTFHCAHHRSQGCS*MEVWVF
Trigger: AAATACCCAAACCTCCATGCAGCTGCATCCCTGAGA...CCTGTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
3UTR-3UTR TCA 90 bp GCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGTGGGCAGAAGAAAGATaGCAAAGGGTTAGGACTCCA +
Preference number: 2 (lower is better)
Translates to: AFYFLTSIRSTGRAQPNEWAEER*QRVRTP
Trigger: TGGAGTCCTAACCCTTTGTCATCTTTCTTCTGCCCA...CTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
3UTR-3UTR CCA 90 bp AGCTTTATGGTAAGAAACCGAGAAGTAACAAGTAACAGACCACTTGTTGCTGTGAGCGGAAGCTCTCTTTaGAGAGACTCTGCTTCGCCC +
Preference number: 2 (lower is better)
Translates to: SFMVRNREVTSNRPLVAVSGSSL*RDSASP
Trigger: GGGCGAAGCAGAGTCTCTCCAAAGAGAGCTTCCGCT...CACAGCAACAAGTGGTCTGTTACTTGTTACTTCTCGGTTTCTTACCATAAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
3UTR-3UTR CCA 90 bp AGCTTTATGGTAAGAAACCGAGAAGTAACAAGTAACAGACCACTTGTTGCTGTGTCTGGGGTAAGTGTGTaGGGACAGGGTTATGGGCAG +
Preference number: 2 (lower is better)
Translates to: SFMVRNREVTSNRPLVAVSGVSV*GQGYGQ
Trigger: CTGCCCATAACCCTGTCCCCACACACTTACCCCAGA...CACAGCAACAAGTGGTCTGTTACTTGTTACTTCTCGGTTTCTTACCATAAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
3UTR-3UTR TCA 90 bp AGCTTTATGGTAAGAAACCGAGAAGTAACAAGTAACAGACCACTTGTTGCTGTGAAAGACAGCAGGCACTaGGAAGAGAAAGCCCTCACC +
Preference number: 2 (lower is better)
Translates to: SFMVRNREVTSNRPLVAVKDSRH*EEKALT
Trigger: GGTGAGGGCTTTCTCTTCTCAGTGCCTGCTGTCTTT...CACAGCAACAAGTGGTCTGTTACTTGTTACTTCTCGGTTTCTTACCATAAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
3UTR-3UTR GCA 90 bp GAAGGGGCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCCAGCTCTTAAATAACTaGTCATTGCACTTAATACTC +
Preference number: 2 (lower is better)
Translates to: EGAFYFLTSIRSTGRAQPQLLNN*SLHLIL
Trigger: GAGTATTAAGTGCAATGAGCAGTTATTTAAGAGCTG...GGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGCCCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
3UTR-3UTR GCA 90 bp GCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGCAGCTCTTAAATAACTaGTCATTGCACTTAATACTC +
Preference number: 2 (lower is better)
Translates to: AFYFLTSIRSTGRAQPNEQLLNN*SLHLIL
Trigger: GAGTATTAAGTGCAATGAGCAGTTATTTAAGAGCTG...CTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
3UTR GCA 72 bp ACGAGGCTGGCTCGGTCCAAGCCAGAAGCACCCAGCTaGCATCCTCCCCACCCTGCCTCCAAAGAACCAGGG +
Preference number: 3 (lower is better)
Translates to: TRLARSKPEAPS*HPPHPASKEPG
Trigger: CCCTGGTTCTTTGGAGGCAGGGTGGGGAGGATGGCAGCTGGGTGCTTCTGGCTTGGACCGAGCCAGCCTCGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
3UTR CCA 72 bp GGGGAGGCATCACTGCTCCCTCCTGACTCTTTCCCATaGGGCCCAGCGACTTCGAGCGGCCCAGCAGGTAAC +
Preference number: 3 (lower is better)
Translates to: GEASLLPPDSFP*GPATSSGPAGN
Trigger: GTTACCTGCTGGGCCGCTCGAAGTCGCTGGGCCCCATGGGAAAGAGTCAGGAGGGAGCAGTGATGCCTCCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
3UTR CCA 72 bp CTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTaGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCC +
Preference number: 3 (lower is better)
Translates to: LWRDSASPTSAA*SCQTPTAWKVP
Trigger: GGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
3UTR CCA 72 bp GGCCCCGGCTATAATACGGTCAGAGGCAGGCAGAGCTaGAAGCCGCGGGTGGGTGCAGGTGGAAGAGATCAG +
Preference number: 3 (lower is better)
Translates to: GPGYNTVRGRQS*KPRVGAGGRDQ
Trigger: CTGATCTCTTCCACCTGCACCCACCCGCGGCTTCCAGCTCTGCCTGCCTCTGACCGTATTATAGCCGGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
3UTR CCA 72 bp CAGTGGTGCCCCTCTATCCTGGGAGAGGCTGTGGGGTaGGAGAGTCGTGAGCCATCCCAGGCTATGCACTGG +
Preference number: 3 (lower is better)
Translates to: QWCPSILGEAVG*ESREPSQAMHW
Trigger: CCAGTGCATAGCCTGGGATGGCTCACGACTCTCCCACCCCACAGCCTCTCCCAGGATAGAGGGGCACCACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
3UTR CCA 72 bp AGCATGGCGTTCAGAGGCAAGAGCGGAAGCTCTCTTTaGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGG +
Preference number: 3 (lower is better)
Translates to: SMAFRGKSGSSL*RDSASPTSAAW
Trigger: CCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCTTCCGCTCTTGCCTCTGAACGCCATGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
3UTR CCA 72 bp GTAACCTATCCACCATCCCTGAGCAGGAGGCTGAGATaGAGGTCCACCACCGGCTCCATGGAATGCCAGGCC +
Preference number: 3 (lower is better)
Translates to: VTYPPSLSRRLR*RSTTGSMECQA
Trigger: GGCCTGGCATTCCATGGAGCCGGTGGTGGACCTCCATCTCAGCCTCCTGCTCAGGGATGGTGGATAGGTTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000135375.4
ENSMUST00000167856.8
ENSMUST00000172303.10
3UTR CCA 72 bp ACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTaGAAAGTCCCCCTGACAGAAAGCCAAGGTGTTTTC +
Preference number: 3 (lower is better)
Translates to: TSAAWSCQTPTA*KVPLTESQGVF
Trigger: GAAAACACCTTGGCTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
3UTR-3UTR CAA 90 bp GCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCTGAGCGGAAGCTCTCTTaGGAGAGACTCTGCTTCGCC +
Preference number: 3 (lower is better)
Translates to: AMAEGKGDGKQVQHQVLPERKLS*ERLCFA
Trigger: GGCGAAGCAGAGTCTCTCCAAAGAGAGCTTCCGCTC...AGGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
3UTR-3UTR CAA 90 bp CTCTGGAGAAGTGAAGATGGAGGGGAGATTCCCAAGGCATCCCACAGGCCCCAGGAGCGGAAGCTCTCTTaGGAGAGACTCTGCTTCGCC +
Preference number: 3 (lower is better)
Translates to: LWRSEDGGEIPKASHRPQERKLS*ERLCFA
Trigger: GGCGAAGCAGAGTCTCTCCAAAGAGAGCTTCCGCTC...CTGGGGCCTGTGGGATGCCTTGGGAATCTCCCCTCCATCTTCACTTCTCCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
3UTR TCA 72 bp GGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTaGCAGAAAGCCAAGGTGTTTTCCATGCAGATCGGC +
Preference number: 3 (lower is better)
Translates to: GAVRRPQPGKSP*QKAKVFSMQIG
Trigger: GCCGATCTGCATGGAAAACACCTTGGCTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
3UTR CCA 72 bp CGCTGTCACTCAGATAGCTGTGGGAGAACCGGGGTCTaGAGATGCTGTCCACAGGATCATGCTCATCATCCG +
Preference number: 3 (lower is better)
Translates to: RCHSDSCGRTGV*RCCPQDHAHHP
Trigger: CGGATGATGAGCATGATCCTGTGGACAGCATCTCCAGACCCCGGTTCTCCCACAGCTATCTGAGTGACAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
3UTR-3UTR CAA 90 bp TCTGGGGTAAGTGTGTGGGGACAGGGTTATGGGCAGAAGAAAGATGACAAAGGGGAGCGGAAGCTCTCTTaGGAGAGACTCTGCTTCGCC +
Preference number: 3 (lower is better)
Translates to: SGVSVWGQGYGQKKDDKGERKLS*ERLCFA
Trigger: GGCGAAGCAGAGTCTCTCCAAAGAGAGCTTCCGCTC...CCCTTTGTCATCTTTCTTCTGCCCATAACCCTGTCCCCACACACTTACCCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
3UTR-3UTR CAA 90 bp CTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACAGGGAGCGGAAGCTCTCTTaGGAGAGACTCTGCTTCGCC +
Preference number: 3 (lower is better)
Translates to: LQSDKQTKTSTFHCAHHRERKLS*ERLCFA
Trigger: GGCGAAGCAGAGTCTCTCCAAAGAGAGCTTCCGCTC...CCTGTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
3UTR TCA 72 bp TACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATaGGTACAAAGCAATGGCAGAAGGGAAGGGGGATGG +
Preference number: 3 (lower is better)
Translates to: YINQVHRESTAQ*VQSNGRREGGW
Trigger: CCATCCCCCTTCCCTTCTGCCATTGCTTTGTACTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
3UTR-3UTR CAA 90 bp GCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGGAGCGGAAGCTCTCTTaGGAGAGACTCTGCTTCGCC +
Preference number: 3 (lower is better)
Translates to: AFYFLTSIRSTGRAQPNEERKLS*ERLCFA
Trigger: GGCGAAGCAGAGTCTCTCCAAAGAGAGCTTCCGCTC...CTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
3UTR CCA 72 bp AACAGACCACTTGTTGCTGTGTCTGGGGTAAGTGTGTaGGGACAGGGTTATGGGCAGAAGAAAGATGACAAA +
Preference number: 3 (lower is better)
Translates to: NRPLVAVSGVSV*GQGYGQKKDDK
Trigger: TTTGTCATCTTTCTTCTGCCCATAACCCTGTCCCCACACACTTACCCCAGACACAGCAACAAGTGGTCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGAGCCTGAGAGCACCGTaGCACTGCCCGCCCGGCCCA +
Preference number: 4 (lower is better)
Translates to: PTSAAWSCQTPTAWKVPLSLRAP*HCPPGP
Trigger: TGGGCCGGGCGGGCAGTGCCACGGTGCTCTCAGGCT...CAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGGGTCAGGTTCCTCCCTaGGGCCCCCACGGGCCTTCC +
Preference number: 4 (lower is better)
Translates to: PTSAAWSCQTPTAWKVPLGQVPP*GPHGPS
Trigger: GGAAGGCCCGTGGGGGCCCCAGGGAGGAACCTGACC...CAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS-3UTR TCA 90 bp CGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCGGTGGAGCTCTGTCCTaGGGGTGGCATCCCCACAGG +
Preference number: 4 (lower is better)
Translates to: RPPLPRGAVRRPQPGKSPGGALS*GWHPHR
Trigger: CCTGTGGGGATGCCACCCTCAGGACAGAGCTCCACC...GGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCGCCTGCAATCGAGCCTaGGAGCACCGTGGCACTGCC +
Preference number: 4 (lower is better)
Translates to: RPPLPRGAVRRPQPGKSPACNRA*EHRGTA
Trigger: GGCAGTGCCACGGTGCTCTCAGGCTCGATTGCAGGC...GGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCCCCACCCTGCCTCCAAAGAACCAGGGCCCCGGCTCTGCTAACCGCTGTCCCAGTAGCCTCACTGGCTaGGCGCCGGGCCACACGCAG +
Preference number: 4 (lower is better)
Translates to: LPTLPPKNQGPGSANRCPSSLTG*APGHTQ
Trigger: CTGCGTGTGGCCCGGCGCCCAGCCAGTGAGGCTACT...GGGACAGCGGTTAGCAGAGCCGGGGCCCTGGTTCTTTGGAGGCAGGGTGGGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCAGCCTGAGAGCACCGTaGCACTGCCCGCCCGGCCCA +
Preference number: 4 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSSLRAP*HCPPGP
Trigger: TGGGCCGGGCGGGCAGTGCCACGGTGCTCTCAGGCT...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGCCTGAGAGCACCGTaGCACTGCCCGCCCGGCCCA +
Preference number: 4 (lower is better)
Translates to: HLCRVELSDAHSLESPPDSLRAP*HCPPGP
Trigger: TGGGCCGGGCGGGCAGTGCCACGGTGCTCTCAGGCT...GTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGAGCCTGAGAGCACCGTaGCACTGCCCGCCCGGCCCA +
Preference number: 4 (lower is better)
Translates to: RLCFAHLCRVELSDAHSLSLRAP*HCPPGP
Trigger: TGGGCCGGGCGGGCAGTGCCACGGTGCTCTCAGGCT...CAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCATGTCCCGGGAGGCCTaGGCCACAGCTGCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: RPPLPRGAVRRPQPGKSPMSREA*ATAALC
Trigger: GCACAAGGCAGCTGTGGCCCAGGCCTCCCGGGACAT...GGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACGCCCCGTGGCTGGGGTaGCACAGACAGGCTTCGGGC +
Preference number: 4 (lower is better)
Translates to: HLCRVELSDAHSLESPPDAPWLG*HRQASG
Trigger: GCCCGAAGCCTGTCTGTGCCACCCCAGCCACGGGGC...GTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS-3UTR TCA 90 bp CCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGCTCTCCTCAGGGCCCTaGCGGAAGGAGGTGGACCGT +
Preference number: 4 (lower is better)
Translates to: PTSAAWSCQTPTAWKVPLLSSGP*RKEVDR
Trigger: ACGGTCCACCTCCTTCCGTCAGGGCCCTGAGGAGAG...CAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCCGCACCAGGCACCAGTaGCTCCTCTTCCAGGAGCCA +
Preference number: 4 (lower is better)
Translates to: RPPLPRGAVRRPQPGKSPRTRHQ*LLFQEP
Trigger: TGGCTCCTGGAAGAGGAGGCACTGGTGCCTGGTGCG...GGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCG
68% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCCCCACCCTGCCTCCAAAGAACCAGGGCCCCGGCTCTGCTAACCGCTGTCCCAGAGCACCGTGGCACTaGCCGCCCGGCCCAGAAACA +
Preference number: 4 (lower is better)
Translates to: LPTLPPKNQGPGSANRCPRAPWH*PPGPET
Trigger: TGTTTCTGGGCCGGGCGGGCAGTGCCACGGTGCTCT...GGGACAGCGGTTAGCAGAGCCGGGGCCCTGGTTCTTTGGAGGCAGGGTGGGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTCGTGGTTTCGGACCTaGTGGCCCTCCAGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: RPPLPRGAVRRPQPGKSPSWFRT*WPSRCS
Trigger: GCTGCACCTGGAGGGCCAGCAGGTCCGAAACCACGA...GGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCGGGCCCGATCCAGCATaGTTGTGCGCCGCAGTGAGA +
Preference number: 4 (lower is better)
Translates to: RPPLPRGAVRRPQPGKSPGPDPA*LCAAVR
Trigger: TCTCACTGCGGCGCACAACCATGCTGGATCGGGCCC...GGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CCA 90 bp GCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCAGTAGCCTCACTGGCTaGGCGCCGGGCCACACGCAG +
Preference number: 4 (lower is better)
Translates to: ASPTSAAWSCQTPTAWKVSSLTG*APGHTQ
Trigger: CTGCGTGTGGCCCGGCGCCCAGCCAGTGAGGCTACT...GACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTAGCCTGAGAGCACCGTaGCACTGCCCGCCCGGCCCA +
Preference number: 4 (lower is better)
Translates to: CFAHLCRVELSDAHSLESSLRAP*HCPPGP
Trigger: TGGGCCGGGCGGGCAGTGCCACGGTGCTCTCAGGCT...ACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAGCCTGAGAGCACCGTaGCACTGCCCGCCCGGCCCA +
Preference number: 4 (lower is better)
Translates to: LCRVELSDAHSLESPPDRSLRAP*HCPPGP
Trigger: TGGGCCGGGCGGGCAGTGCCACGGTGCTCTCAGGCT...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp ACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAAGCCTGAGAGCACCGTaGCACTGCCCGCCCGGCCCA +
Preference number: 4 (lower is better)
Translates to: TSAAWSCQTPTAWKVPLTSLRAP*HCPPGP
Trigger: TGGGCCGGGCGGGCAGTGCCACGGTGCTCTCAGGCT...TGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGCAGGAGGCTGAGATGGAGGTCCACCACCGGCTCCATGGAATGCCAGGCCACCAGCCTGAGAGCACCGTaGCACTGCCCGCCCGGCCCA +
Preference number: 4 (lower is better)
Translates to: SRRLRWRSTTGSMECQATSLRAP*HCPPGP
Trigger: TGGGCCGGGCGGGCAGTGCCACGGTGCTCTCAGGCT...GGTGGCCTGGCATTCCATGGAGCCGGTGGTGGACCTCCATCTCAGCCTCCTGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCGGCGCAAGGCCAGCTaGGAGCCACCTTCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSRRKAS*EPPSRP
Trigger: AGGCCTGGAAGGTGGCTCCCAGCTGGCCTTGCGCCG...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCTCCGCGTCCAGCAGCTaGGAGGCGGACTCTCCCGTG +
Preference number: 4 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSSASSS*EADSPV
Trigger: CACGGGAGAGTCCGCCTCCCAGCTGCTGGACGCGGA...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGTCCGCGTCCAGCAGCTaGGAGGCGGACTCTCCCGTG +
Preference number: 4 (lower is better)
Translates to: RLCFAHLCRVELSDAHSLSASSS*EADSPV
Trigger: CACGGGAGAGTCCGCCTCCCAGCTGCTGGACGCGGA...CAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCTCCGCGTCCAGCAGCTaGGAGGCGGACTCTCCCGTG +
Preference number: 4 (lower is better)
Translates to: ASPTSAAWSCQTPTAWKVSASSS*EADSPV
Trigger: CACGGGAGAGTCCGCCTCCCAGCTGCTGGACGCGGA...GACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCGTTCTGCTTGGCCAGTaGACCGAACTTGGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: RPPLPRGAVRRPQPGKSPVLLGQ*TELGCP
Trigger: CGGGCAGCCAAGTTCGGTTCACTGGCCAAGCAGAAC...GGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR TCA 90 bp CGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCCACCTCTACCTGAGGTaGTGGGGCTGCAGAGTGCTC +
Preference number: 4 (lower is better)
Translates to: RPPLPRGAVRRPQPGKSPHLYLR*WGCRVL
Trigger: GAGCACTCTGCAGCCCCATCACCTCAGGTAGAGGTG...GGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR TCA 90 bp GCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCGGTGGAGCTCTGTCCTaGGGGTGGCATCCCCACAGG +
Preference number: 4 (lower is better)
Translates to: ASPTSAAWSCQTPTAWKVGGALS*GWHPHR
Trigger: CCTGTGGGGATGCCACCCTCAGGACAGAGCTCCACC...GACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACGGTGGAGCTCTGTCCTaGGGGTGGCATCCCCACAGG +
Preference number: 4 (lower is better)
Translates to: HLCRVELSDAHSLESPPDGGALS*GWHPHR
Trigger: CCTGTGGGGATGCCACCCTCAGGACAGAGCTCCACC...GTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACCTCTCCTCAGGGCCCTaGCGGAAGGAGGTGGACCGT +
Preference number: 4 (lower is better)
Translates to: HLCRVELSDAHSLESPPDLSSGP*RKEVDR
Trigger: ACGGTCCACCTCCTTCCGTCAGGGCCCTGAGGAGAG...GTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp GCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCTCTCCTCAGGGCCCTaGCGGAAGGAGGTGGACCGT +
Preference number: 4 (lower is better)
Translates to: ASPTSAAWSCQTPTAWKVLSSGP*RKEVDR
Trigger: ACGGTCCACCTCCTTCCGTCAGGGCCCTGAGGAGAG...GACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGATCGGCATGGGCCAGTaGGCGAACCAGGTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: PTSAAWSCQTPTAWKVPLIGMGQ*ANQVGS
Trigger: GCTTCCCACCTGGTTCGCTCACTGGCCCATGCCGAT...CAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACGCCTGCAATCGAGCCTaGGAGCACCGTGGCACTGCC +
Preference number: 4 (lower is better)
Translates to: HLCRVELSDAHSLESPPDACNRA*EHRGTA
Trigger: GGCAGTGCCACGGTGCTCTCAGGCTCGATTGCAGGC...GTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCCGGCCATGCCGGTGGTaGAGGTTTTCCTCATGCTGG +
Preference number: 4 (lower is better)
Translates to: RPPLPRGAVRRPQPGKSPRPCRW*RFSSCW
Trigger: CCAGCATGAGGAAAACCTTCACCACCGGCATGGCCG...GGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCCCCGGAGCTGCTTCTTaGCCTTGGCCAGAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: RPPLPRGAVRRPQPGKSPPGAAS*PWPEKP
Trigger: AGGCTTCTCTGGCCAAGGTCAAGAAGCAGCTCCGGG...GGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCG
67% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp TCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAGGAGCCTCGCGTGGCTaGGGAGGCTCGGCTGACTGG +
Preference number: 4 (lower is better)
Translates to: SAAWSCQTPTAWKVPLTEGASRG*GGSADW
Trigger: CCAGTCAGCCGAGCCTCCTCAGCCACGCGAGGCTCC...TTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS-3UTR GCA 90 bp CCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGAGGCCAGGTCCTTGGTaGCTGCCCCTGGCTCAGCAA +
Preference number: 4 (lower is better)
Translates to: PTSAAWSCQTPTAWKVPLRPGPW*LPLAQQ
Trigger: TTGCTGAGCCAGGGGCAGGCACCAAGGACCTGGCCT...CAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR GCA 90 bp CGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCAGCGTAGATGTGGGGTaGCATGTCCTCCCGCCGACA +
Preference number: 4 (lower is better)
Translates to: RPPLPRGAVRRPQPGKSPSVDVG*HVLPPT
Trigger: TGTCGGCGGGAGGACATGGCACCCCACATCTACGCT...GGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCCCCACCCTGCCTCCAAAGAACCAGGGCCCCGGCTCTGCTAACCGCTGTCCCCGCACCAGGCACCAGTaGCTCCTCTTCCAGGAGCCA +
Preference number: 4 (lower is better)
Translates to: LPTLPPKNQGPGSANRCPRTRHQ*LLFQEP
Trigger: TGGCTCCTGGAAGAGGAGGCACTGGTGCCTGGTGCG...GGGACAGCGGTTAGCAGAGCCGGGGCCCTGGTTCTTTGGAGGCAGGGTGGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGCGCACCAGGCACCAGTaGCTCCTCTTCCAGGAGCCA +
Preference number: 4 (lower is better)
Translates to: PTSAAWSCQTPTAWKVPLRTRHQ*LLFQEP
Trigger: TGGCTCCTGGAAGAGGAGGCACTGGTGCCTGGTGCG...CAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCCGTGCCAACGTGCCTaGCCGGAAGAACACCCGGCT +
Preference number: 4 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSPCQRA*PEEHPA
Trigger: AGCCGGGTGTTCTTCCGGGCAGGCACGTTGGCACGG...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCCCCACCCTGCCTCCAAAGAACCAGGGCCCCGGCTCTGCTAACCGCTGTCCCCCAACCGTGCCAACGTaGCTGCCCGGAAGAACACCC +
Preference number: 4 (lower is better)
Translates to: LPTLPPKNQGPGSANRCPPTVPT*LPGRTP
Trigger: GGGTGTTCTTCCGGGCAGGCACGTTGGCACGGTTGG...GGGACAGCGGTTAGCAGAGCCGGGGCCCTGGTTCTTTGGAGGCAGGGTGGGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACGTAGCCCCGGCAGGCTaGCTGGAACAGGGTCAGGTG +
Preference number: 4 (lower is better)
Translates to: HLCRVELSDAHSLESPPDVAPAG*LEQGQV
Trigger: CACCTGACCCTGTTCCAGGCAGCCTGCCGGGGCTAC...GTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCGTAGCCCCGGCAGGCTaGCTGGAACAGGGTCAGGTG +
Preference number: 4 (lower is better)
Translates to: ASPTSAAWSCQTPTAWKVVAPAG*LEQGQV
Trigger: CACCTGACCCTGTTCCAGGCAGCCTGCCGGGGCTAC...GACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCTGCAGCTTCTCCCGCTaGGTCTCCTCGTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSCSFSR*VSSWAW
Trigger: CCAGGCCCACGAGGAGACGCAGCGGGAGAAGCTGCA...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCCCGGAGAGCAGGAGGTaGTGGTGGCACCAGAGCGGG +
Preference number: 4 (lower is better)
Translates to: AAWSCQTPTAWKVPLTESPESRR*WWHQSG
Trigger: CCCGCTCTGGTGCCACCACCACCTCCTGCTCTCCGG...GCTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CCA 90 bp TTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACCCGGAGAGCAGGAGGTaGTGGTGGCACCAGAGCGGG +
Preference number: 4 (lower is better)
Translates to: LERLCFAHLCRVELSDAHPESRR*WWHQSG
Trigger: CCCGCTCTGGTGCCACCACCACCTCCTGCTCTCCGG...GTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CCA 90 bp CCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGGGGCCCGATCCAGCATaGTTGTGCGCCGCAGTGAGA +
Preference number: 4 (lower is better)
Translates to: PTSAAWSCQTPTAWKVPLGPDPA*LCAAVR
Trigger: TCTCACTGCGGCGCACAACCATGCTGGATCGGGCCC...CAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CCA 90 bp ACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAAGTAGCCTCACTGGCTaGGCGCCGGGCCACACGCAG +
Preference number: 4 (lower is better)
Translates to: TSAAWSCQTPTAWKVPLTSSLTG*APGHTQ
Trigger: CTGCGTGTGGCCCGGCGCCCAGCCAGTGAGGCTACT...TGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGTAGCCTCACTGGCTaGGCGCCGGGCCACACGCAG +
Preference number: 4 (lower is better)
Translates to: LERLCFAHLCRVELSDAHSSLTG*APGHTQ
Trigger: CTGCGTGTGGCCCGGCGCCCAGCCAGTGAGGCTACT...GTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCAGTAGCCTCACTGGCTaGGCGCCGGGCCACACGCAG +
Preference number: 4 (lower is better)
Translates to: AAWSCQTPTAWKVPLTESSSLTG*APGHTQ
Trigger: CTGCGTGTGGCCCGGCGCCCAGCCAGTGAGGCTACT...GCTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTAGTAGCCTCACTGGCTaGGCGCCGGGCCACACGCAG +
Preference number: 4 (lower is better)
Translates to: CFAHLCRVELSDAHSLESSSLTG*APGHTQ
Trigger: CTGCGTGTGGCCCGGCGCCCAGCCAGTGAGGCTACT...ACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCGTTCCTCGGGGGAGATaGCCAGCACCTTCATGGCAG +
Preference number: 4 (lower is better)
Translates to: RPPLPRGAVRRPQPGKSPVPRGR*PAPSWQ
Trigger: CTGCCATGAAGGTGCTGGCCATCTCCCCCGAGGAAC...GGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCAGGAAGGTGCGCTCGTaGAACAGCCTCTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: RPPLPRGAVRRPQPGKSPRKVRS*NSLCSL
Trigger: CAGGCTGCAGAGGCTGTTCCACGAGCGCACCTTCCT...GGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCCTGAGAGCACCGTaGCACTGCCCGCCCGGCCCA +
Preference number: 4 (lower is better)
Translates to: SAAWSCQTPTAWKVPLTESLRAP*HCPPGP
Trigger: TGGGCCGGGCGGGCAGTGCCACGGTGCTCTCAGGCT...TTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCGGCGCAAGGCCAGCTaGGAGCCACCTTCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: CFAHLCRVELSDAHSLESRRKAS*EPPSRP
Trigger: AGGCCTGGAAGGTGGCTCCCAGCTGGCCTTGCGCCG...ACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACCGGCGCAAGGCCAGCTaGGAGCCACCTTCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: LERLCFAHLCRVELSDAHRRKAS*EPPSRP
Trigger: AGGCCTGGAAGGTGGCTCCCAGCTGGCCTTGCGCCG...GTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGCAGGAGGCTGAGATGGAGGTCCACCACCGGCTCCATGGAATGCCAGGCCACCCGGCGCAAGGCCAGCTaGGAGCCACCTTCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: SRRLRWRSTTGSMECQATRRKAS*EPPSRP
Trigger: AGGCCTGGAAGGTGGCTCCCAGCTGGCCTTGCGCCG...GGTGGCCTGGCATTCCATGGAGCCGGTGGTGGACCTCCATCTCAGCCTCCTGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCCGGCGCAAGGCCAGCTaGGAGCCACCTTCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: LWRDSASPTSAAWSCQTPRRKAS*EPPSRP
Trigger: AGGCCTGGAAGGTGGCTCCCAGCTGGCCTTGCGCCG...GGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGATCCGCGTCCAGCAGCTaGGAGGCGGACTCTCCCGTG +
Preference number: 4 (lower is better)
Translates to: LCRVELSDAHSLESPPDRSASSS*EADSPV
Trigger: CACGGGAGAGTCCGCCTCCCAGCTGCTGGACGCGGA...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCTCCGCGTCCAGCAGCTaGGAGGCGGACTCTCCCGTG +
Preference number: 4 (lower is better)
Translates to: LWRDSASPTSAAWSCQTPSASSS*EADSPV
Trigger: CACGGGAGAGTCCGCCTCCCAGCTGCTGGACGCGGA...GGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGGTTTCGGACCTGCTaGCCCTCCAGGTGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: RPPLPRGAVRRPQPGKSPWFRTC*PSRCSL
Trigger: CAAGCTGCACCTGGAGGGCCAGCAGGTCCGAAACCA...GGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACATGTCCCGGGAGGCCTaGGCCACAGCTGCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: HLCRVELSDAHSLESPPDMSREA*ATAALC
Trigger: GCACAAGGCAGCTGTGGCCCAGGCCTCCCGGGACAT...GTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCGGCCGAGGGATAGCCTaGAGTCAGGGCTCTCCCGAC +
Preference number: 4 (lower is better)
Translates to: ASPTSAAWSCQTPTAWKVGRGIA*SQGSPD
Trigger: GTCGGGAGAGCCCTGACTCCAGGCTATCCCTCGGCC...GACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS-3UTR TCA 90 bp CTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCGGTGGAGCTCTGTCCTaGGGGTGGCATCCCCACAGG +
Preference number: 4 (lower is better)
Translates to: LWRDSASPTSAAWSCQTPGGALS*GWHPHR
Trigger: CCTGTGGGGATGCCACCCTCAGGACAGAGCTCCACC...GGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp TGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTGGTGGAGCTCTGTCCTaGGGGTGGCATCCCCACAGG +
Preference number: 4 (lower is better)
Translates to: CFAHLCRVELSDAHSLESGGALS*GWHPHR
Trigger: CCTGTGGGGATGCCACCCTCAGGACAGAGCTCCACC...ACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp TGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCTCTCCTCAGGGCCCTaGCGGAAGGAGGTGGACCGT +
Preference number: 4 (lower is better)
Translates to: CFAHLCRVELSDAHSLESLSSGP*RKEVDR
Trigger: ACGGTCCACCTCCTTCCGTCAGGGCCCTGAGGAGAG...ACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCCTCTCCTCAGGGCCCTaGCGGAAGGAGGTGGACCGT +
Preference number: 4 (lower is better)
Translates to: LWRDSASPTSAAWSCQTPLSSGP*RKEVDR
Trigger: ACGGTCCACCTCCTTCCGTCAGGGCCCTGAGGAGAG...GGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCAGTGCTGGCTGGACTTaGGAGCCCTGTTTACCAGGG +
Preference number: 4 (lower is better)
Translates to: RPPLPRGAVRRPQPGKSPSAGWT*EPCLPG
Trigger: CCCTGGTAAACAGGGCTCTCAAGTCCAGCCAGCACT...GGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCATCGGCATGGGCCAGTaGGCGAACCAGGTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSIGMGQ*ANQVGS
Trigger: GCTTCCCACCTGGTTCGCTCACTGGCCCATGCCGAT...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AGCAGGAGGCTGAGATGGAGGTCCACCACCGGCTCCATGGAATGCCAGGCCACCGCCTGCAATCGAGCCTaGGAGCACCGTGGCACTGCC +
Preference number: 4 (lower is better)
Translates to: SRRLRWRSTTGSMECQATACNRA*EHRGTA
Trigger: GGCAGTGCCACGGTGCTCTCAGGCTCGATTGCAGGC...GGTGGCCTGGCATTCCATGGAGCCGGTGGTGGACCTCCATCTCAGCCTCCTGCT
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAGCCTGCAATCGAGCCTaGGAGCACCGTGGCACTGCC +
Preference number: 4 (lower is better)
Translates to: LCRVELSDAHSLESPPDRACNRA*EHRGTA
Trigger: GGCAGTGCCACGGTGCTCTCAGGCTCGATTGCAGGC...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp TTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACGCCTGCAATCGAGCCTaGGAGCACCGTGGCACTGCC +
Preference number: 4 (lower is better)
Translates to: LERLCFAHLCRVELSDAHACNRA*EHRGTA
Trigger: GGCAGTGCCACGGTGCTCTCAGGCTCGATTGCAGGC...GTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CTCCCCACCCTGCCTCCAAAGAACCAGGGCCCCGGCTCTGCTAACCGCTGTCCCGTGTCTCCAGCTCCCTaGTCTTCGCTTCCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: LPTLPPKNQGPGSANRCPVSPAP*SSLPAC
Trigger: GCAGGCAGGAAGCGAAGATCAGGGAGCTGGAGACAC...GGGACAGCGGTTAGCAGAGCCGGGGCCCTGGTTCTTTGGAGGCAGGGTGGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCGTGAGTGTGCCTCACTaGGGGCCACGCTGGCTCCAT +
Preference number: 4 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSVSVPH*GPRWLH
Trigger: ATGGAGCCAGCGTGGCCCTCAGTGAGGCACACTCAC...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS-3UTR GCA 90 bp CCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGAGCGTAGATGTGGGGTaGCATGTCCTCCCGCCGACA +
Preference number: 4 (lower is better)
Translates to: PTSAAWSCQTPTAWKVPLSVDVG*HVLPPT
Trigger: TGTCGGCGGGAGGACATGGCACCCCACATCTACGCT...CAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCCCCACCCTGCCTCCAAAGAACCAGGGCCCCGGCTCTGCTAACCGCTGTCCCGAGCACTCAGTTTGGTaGCCTCTCCCAGGCCGCTCT +
Preference number: 4 (lower is better)
Translates to: LPTLPPKNQGPGSANRCPEHSVW*PLPGRS
Trigger: AGAGCGGCCTGGGAGAGGGCACCAAACTGAGTGCTC...GGGACAGCGGTTAGCAGAGCCGGGGCCCTGGTTCTTTGGAGGCAGGGTGGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCGCACCAGGCACCAGTaGCTCCTCTTCCAGGAGCCA +
Preference number: 4 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSRTRHQ*LLFQEP
Trigger: TGGCTCCTGGAAGAGGAGGCACTGGTGCCTGGTGCG...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGAGCACCGTGGCACTaGCCGCCCGGCCCAGAAACA +
Preference number: 4 (lower is better)
Translates to: LERLCFAHLCRVELSDAHRAPWH*PPGPET
Trigger: TGTTTCTGGGCCGGGCGGGCAGTGCCACGGTGCTCT...GTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTAGAGCACCGTGGCACTaGCCGCCCGGCCCAGAAACA +
Preference number: 4 (lower is better)
Translates to: CFAHLCRVELSDAHSLESRAPWH*PPGPET
Trigger: TGTTTCTGGGCCGGGCGGGCAGTGCCACGGTGCTCT...ACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACCCGTGCCAACGTGCCTaGCCGGAAGAACACCCGGCT +
Preference number: 4 (lower is better)
Translates to: LERLCFAHLCRVELSDAHPCQRA*PEEHPA
Trigger: AGCCGGGTGTTCTTCCGGGCAGGCACGTTGGCACGG...GTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGACCGTGCCAACGTGCCTaGCCGGAAGAACACCCGGCT +
Preference number: 4 (lower is better)
Translates to: LCRVELSDAHSLESPPDRPCQRA*PEEHPA
Trigger: AGCCGGGTGTTCTTCCGGGCAGGCACGTTGGCACGG...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCCCGTGCCAACGTGCCTaGCCGGAAGAACACCCGGCT +
Preference number: 4 (lower is better)
Translates to: LWRDSASPTSAAWSCQTPPCQRA*PEEHPA
Trigger: AGCCGGGTGTTCTTCCGGGCAGGCACGTTGGCACGG...GGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp ACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACACCGTGCCAACGTGCCTaGCCGGAAGAACACCCGGCT +
Preference number: 4 (lower is better)
Translates to: TSAAWSCQTPTAWKVPLTPCQRA*PEEHPA
Trigger: AGCCGGGTGTTCTTCCGGGCAGGCACGTTGGCACGG...TGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCAACCGTGCCAACGTaGCTGCCCGGAAGAACACCC +
Preference number: 4 (lower is better)
Translates to: ASPTSAAWSCQTPTAWKVPTVPT*LPGRTP
Trigger: GGGTGTTCTTCCGGGCAGGCACGTTGGCACGGTTGG...GACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCCAACCGTGCCAACGTaGCTGCCCGGAAGAACACCC +
Preference number: 4 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSPTVPT*LPGRTP
Trigger: GGGTGTTCTTCCGGGCAGGCACGTTGGCACGGTTGG...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCGTAGCCCCGGCAGGCTaGCTGGAACAGGGTCAGGTG +
Preference number: 4 (lower is better)
Translates to: AAWSCQTPTAWKVPLTESVAPAG*LEQGQV
Trigger: CACCTGACCCTGTTCCAGGCAGCCTGCCGGGGCTAC...GCTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGCCCGTTGATCTCGGCTaGCCGAATGAGCCGGGCTTC +
Preference number: 4 (lower is better)
Translates to: RLCFAHLCRVELSDAHSLPVDLG*PNEPGF
Trigger: GAAGCCCGGCTCATTCGGGCAGCCGAGATCAACGGG...CAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCTGCAGCTTCTCCCGCTaGGTCTCCTCGTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LWRDSASPTSAAWSCQTPCSFSR*VSSWAW
Trigger: CCAGGCCCACGAGGAGACGCAGCGGGAGAAGCTGCA...GGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGCCAGTGAACCGAACTTaGCTGCCCGCTGCAGCACAG +
Preference number: 4 (lower is better)
Translates to: PTSAAWSCQTPTAWKVPLPVNRT*LPAAAQ
Trigger: CTGTGCTGCAGCGGGCAGCCAAGTTCGGTTCACTGG...CAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CCA 90 bp AGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGAGCAGGAGGTGGTGGTaGCACCAGAGCGGGAAGACG +
Preference number: 4 (lower is better)
Translates to: RLCFAHLCRVELSDAHSLSRRWW*HQSGKT
Trigger: CGTCTTCCCGCTCTGGTGCCACCACCACCTCCTGCT...CAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CCA 90 bp TGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCCGGAGAGCAGGAGGTaGTGGTGGCACCAGAGCGGG +
Preference number: 4 (lower is better)
Translates to: CRVELSDAHSLESPPDRKPESRR*WWHQSG
Trigger: CCCGCTCTGGTGCCACCACCACCTCCTGCTCTCCGG...CTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CCA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCGGGCCCGATCCAGCATaGTTGTGCGCCGCAGTGAGA +
Preference number: 4 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSGPDPA*LCAAVR
Trigger: TCTCACTGCGGCGCACAACCATGCTGGATCGGGCCC...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CCA 90 bp CTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCCCAAGGCCAGGTCCTTaGTGCCTGCCCCTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: LWRDSASPTSAAWSCQTPPRPGP*CLPLAQ
Trigger: CTGAGCCAGGGGCAGGCACCAAGGACCTGGCCTTGG...GGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CCA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGACCAAGGCCAGGTCCTTaGTGCCTGCCCCTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: LCRVELSDAHSLESPPDRPRPGP*CLPLAQ
Trigger: CTGAGCCAGGGGCAGGCACCAAGGACCTGGCCTTGG...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CCA 90 bp CTCCCCACCCTGCCTCCAAAGAACCAGGGCCCCGGCTCTGCTAACCGCTGTCCCCACCAGTCGATCTCCTaGTACCAGCCCCAAGGCCAG +
Preference number: 4 (lower is better)
Translates to: LPTLPPKNQGPGSANRCPHQSIS*YQPQGQ
Trigger: CTGGCCTTGGGGCTGGTACCAGGAGATCGACTGGTG...GGGACAGCGGTTAGCAGAGCCGGGGCCCTGGTTCTTTGGAGGCAGGGTGGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
CDS-3UTR CCA 90 bp CCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGAGGATGGCTCCGTCATaGTCCAGCTTCACACGCGCC +
Preference number: 4 (lower is better)
Translates to: PTSAAWSCQTPTAWKVPLRMAPS*SSFTRA
Trigger: GGCGCGTGTGAAGCTGGACCATGACGGAGCCATCCT...CAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCCCCACCCTGCCTCCAAAGAACCAGGGCCCCGGCTCTGCTAACCGCTGTCCCTCCAGGGAGAGGATCTaGGAGAAGCGGGTGGCACTG +
Preference number: 4 (lower is better)
Translates to: LPTLPPKNQGPGSANRCPSRERI*EKRVAL
Trigger: CAGTGCCACCCGCTTCTCCCAGATCCTCTCCCTGGA...GGGACAGCGGTTAGCAGAGCCGGGGCCCTGGTTCTTTGGAGGCAGGGTGGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCCCCACCCTGCCTCCAAAGAACCAGGGCCCCGGCTCTGCTAACCGCTGTCCCGCCACCTGGCCAGCTTaGTCAAAGTCCAGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: LPTLPPKNQGPGSANRCPATWPA*SKSRER
Trigger: CCTCTCCCTGGACTTTGACCAAGCTGGCCAGGTGGC...GGGACAGCGGTTAGCAGAGCCGGGGCCCTGGTTCTTTGGAGGCAGGGTGGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGGCCACCTGGCCAGCTTaGTCAAAGTCCAGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: PTSAAWSCQTPTAWKVPLATWPA*SKSRER
Trigger: CCTCTCCCTGGACTTTGACCAAGCTGGCCAGGTGGC...CAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCAAGTAGCCTCACTGGCTaGGCGCCGGGCCACACGCAG +
Preference number: 4 (lower is better)
Translates to: FGETLLRPPLPRGAVRRPSSLTG*APGHTQ
Trigger: CTGCGTGTGGCCCGGCGCCCAGCCAGTGAGGCTACT...TGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGAGTAGCCTCACTGGCTaGGCGCCGGGCCACACGCAG +
Preference number: 4 (lower is better)
Translates to: CRVELSDAHSLESPPDRKSSLTG*APGHTQ
Trigger: CTGCGTGTGGCCCGGCGCCCAGCCAGTGAGGCTACT...CTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCAGTAGCCTCACTGGCTaGGCGCCGGGCCACACGCAG +
Preference number: 4 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRSSLTG*APGHTQ
Trigger: CTGCGTGTGGCCCGGCGCCCAGCCAGTGAGGCTACT...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCGCCAAGTGGTTCAGGTaGAGCTCTGTCCTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: RPPLPRGAVRRPQPGKSPAKWFR*SSVLRV
Trigger: CACCCTCAGGACAGAGCTCCACCTGAACCACTTGGC...GGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGGTTCCTCGGGGGAGATaGCCAGCACCTTCATGGCAG +
Preference number: 4 (lower is better)
Translates to: PTSAAWSCQTPTAWKVPLVPRGR*PAPSWQ
Trigger: CTGCCATGAAGGTGCTGGCCATCTCCCCCGAGGAAC...CAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACCCAGAGCACTCAGTTTaGTGCCCTCTCCCAGGCCGC +
Preference number: 4 (lower is better)
Translates to: HLCRVELSDAHSLESPPDPEHSV*CPLPGR
Trigger: GCGGCCTGGGAGAGGGCACCAAACTGAGTGCTCTGG...GTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCAGAGCACTCAGTTTaGTGCCCTCTCCCAGGCCGC +
Preference number: 4 (lower is better)
Translates to: ASPTSAAWSCQTPTAWKVPEHSV*CPLPGR
Trigger: GCGGCCTGGGAGAGGGCACCAAACTGAGTGCTCTGG...GACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGCCAGAGCACTCAGTTTaGTGCCCTCTCCCAGGCCGC +
Preference number: 4 (lower is better)
Translates to: RLCFAHLCRVELSDAHSLPEHSV*CPLPGR
Trigger: GCGGCCTGGGAGAGGGCACCAAACTGAGTGCTCTGG...CAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGACCAGGTGGGAAGCCTaGTCCACAGCAGCCACGGAG +
Preference number: 4 (lower is better)
Translates to: RLCFAHLCRVELSDAHSLTRWEA*STAATE
Trigger: CTCCGTGGCTGCTGTGGACCAGGCTTCCCACCTGGT...CAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACACCAGGTGGGAAGCCTaGTCCACAGCAGCCACGGAG +
Preference number: 4 (lower is better)
Translates to: HLCRVELSDAHSLESPPDTRWEA*STAATE
Trigger: CTCCGTGGCTGCTGTGGACCAGGCTTCCCACCTGGT...GTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCCCCACCCTGCCTCCAAAGAACCAGGGCCCCGGCTCTGCTAACCGCTGTCCCAGCCGGGGTGCATTCTaGGTGGCTGGGTTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: LPTLPPKNQGPGSANRCPSRGAF*VAGFCL
Trigger: CAAGCAGAACCCAGCCACCCAGAATGCACCCCGGCT...GGGACAGCGGTTAGCAGAGCCGGGGCCCTGGTTCTTTGGAGGCAGGGTGGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGAGCCGGGGTGCATTCTaGGTGGCTGGGTTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: PTSAAWSCQTPTAWKVPLSRGAF*VAGFCL
Trigger: CAAGCAGAACCCAGCCACCCAGAATGCACCCCGGCT...CAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCGGCGCAAGGCCAGCTaGGAGCCACCTTCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRRRKAS*EPPSRP
Trigger: AGGCCTGGAAGGTGGCTCCCAGCTGGCCTTGCGCCG...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCTCCGCGTCCAGCAGCTaGGAGGCGGACTCTCCCGTG +
Preference number: 4 (lower is better)
Translates to: SLERLCFAHLCRVELSDASASSS*EADSPV
Trigger: CACGGGAGAGTCCGCCTCCCAGCTGCTGGACGCGGA...GGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGTCCGCGTCCAGCAGCTaGGAGGCGGACTCTCCCGTG +
Preference number: 4 (lower is better)
Translates to: CRVELSDAHSLESPPDRKSASSS*EADSPV
Trigger: CACGGGAGAGTCCGCCTCCCAGCTGCTGGACGCGGA...CTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCCCCACCCTGCCTCCAAAGAACCAGGGCCCCGGCTCTGCTAACCGCTGTCCCCCTCCAGGTGCAGCTTaGTGTCCTGCAGCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: LPTLPPKNQGPGSANRCPPPGAA*CPAAQL
Trigger: CAGCTGAGCTGCAGGACACCAAGCTGCACCTGGAGG...GGGACAGCGGTTAGCAGAGCCGGGGCCCTGGTTCTTTGGAGGCAGGGTGGGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGTGGTTTCGGACCTGCTaGCCCTCCAGGTGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: PTSAAWSCQTPTAWKVPLWFRTC*PSRCSL
Trigger: CAAGCTGCACCTGGAGGGCCAGCAGGTCCGAAACCA...CAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGTGGGTCAGGGGCGAGTaGCTTCCAGTGGCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: RLCFAHLCRVELSDAHSLWVRGE*LPVAGW
Trigger: CCAACCAGCCACTGGAAGCCACTCGCCCCTGACCCA...CAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCGGAGGGTCTCTCCTCTaGCCCCTTGCCCTCCTTAGG +
Preference number: 4 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSGGSLL*PLALLR
Trigger: CCTAAGGAGGGCAAGGGGCCAGAGGAGAGACCCTCC...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS-3UTR CCA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCGTGAGGAGCGAGTCCTaGTCTCCAGTGCCCCCGATG +
Preference number: 4 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSVRSES*SPVPPM
Trigger: CATCGGGGGCACTGGAGACCAGGACTCGCTCCTCAC...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS-3UTR CCA 90 bp CTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCAGCTGGAGCTGGGGCTaGGGCTGCTCCGTTTGCTCC +
Preference number: 4 (lower is better)
Translates to: LWRDSASPTSAAWSCQTPSWSWG*GCSVCS
Trigger: GGAGCAAACGGAGCAGCCCCAGCCCCAGCTCCAGCT...GGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS-3UTR CCA 90 bp CGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTCTGCTCTTCCGTCTTaGCCTGGCTGTAGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: RPPLPRGAVRRPQPGKSPSALPS*PGCRQE
Trigger: CTCCTGCCTACAGCCAGGCCAAGACGGAAGAGCAGA...GGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000130305.9
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGTTCCGGGACAGGCCTTaGGCCTCTTCATTTGGGCCC +
Preference number: 4 (lower is better)
Translates to: PTSAAWSCQTPTAWKVPLFRDRP*ASSFGP
Trigger: GGGCCCAAATGAAGAGGCCCAAGGCCTGTCCCGGAA...CAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000167856.8
CDS-3UTR TCA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCGTTCTGCTTGGCCAGTaGACCGAACTTGGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSVLLGQ*TELGCP
Trigger: CGGGCAGCCAAGTTCGGTTCACTGGCCAAGCAGAAC...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR TCA 90 bp AGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGTTCTGCTTGGCCAGTaGACCGAACTTGGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: RLCFAHLCRVELSDAHSLVLLGQ*TELGCP
Trigger: CGGGCAGCCAAGTTCGGTTCACTGGCCAAGCAGAAC...CAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR TCA 90 bp CACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACCACCTCTACCTGAGGTaGTGGGGCTGCAGAGTGCTC +
Preference number: 4 (lower is better)
Translates to: HLCRVELSDAHSLESPPDHLYLR*WGCRVL
Trigger: GAGCACTCTGCAGCCCCATCACCTCAGGTAGAGGTG...GTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR TCA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCGGTGGAGCTCTGTCCTaGGGGTGGCATCCCCACAGG +
Preference number: 4 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRGGALS*GWHPHR
Trigger: CCTGTGGGGATGCCACCCTCAGGACAGAGCTCCACC...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp TGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCTCTCCTCAGGGCCCTaGCGGAAGGAGGTGGACCGT +
Preference number: 4 (lower is better)
Translates to: CRVELSDAHSLESPPDRKLSSGP*RKEVDR
Trigger: ACGGTCCACCTCCTTCCGTCAGGGCCCTGAGGAGAG...CTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AGGCAGGCAGAGCTGGAAGCCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTCTCTCCTCAGGGCCCTaGCGGAAGGAGGTGGACCGT +
Preference number: 4 (lower is better)
Translates to: RQAELEAAGGCRWKRSALLSSGP*RKEVDR
Trigger: ACGGTCCACCTCCTTCCGTCAGGGCCCTGAGGAGAG...AAGAGCTGATCTCTTCCACCTGCACCCACCCGCGGCTTCCAGCTCTGCCTGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp ACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAATCGGCATGGGCCAGTaGGCGAACCAGGTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: TSAAWSCQTPTAWKVPLTIGMGQ*ANQVGS
Trigger: GCTTCCCACCTGGTTCGCTCACTGGCCCATGCCGAT...TGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAATCGGCATGGGCCAGTaGGCGAACCAGGTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: LCRVELSDAHSLESPPDRIGMGQ*ANQVGS
Trigger: GCTTCCCACCTGGTTCGCTCACTGGCCCATGCCGAT...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp TCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCGCCTGCAATCGAGCCTaGGAGCACCGTGGCACTGCC +
Preference number: 4 (lower is better)
Translates to: SLERLCFAHLCRVELSDAACNRA*EHRGTA
Trigger: GGCAGTGCCACGGTGCTCTCAGGCTCGATTGCAGGC...GGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp GCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCGGCCATGCCGGTGGTaGAGGTTTTCCTCATGCTGG +
Preference number: 4 (lower is better)
Translates to: ASPTSAAWSCQTPTAWKVRPCRW*RFSSCW
Trigger: CCAGCATGAGGAAAACCTTCACCACCGGCATGGCCG...GACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp GCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCTGCTCCTCTGACAGCTaGACTTGGATGAGGGGCCGC +
Preference number: 4 (lower is better)
Translates to: ASPTSAAWSCQTPTAWKVCSSDS*TWMRGR
Trigger: GCGGCCCCTCATCCAAGTTCAGCTGTCAGAGGAGCA...GACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGCTAGCCGGTCACTGCTaGGTCGGAGCTCGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: RLCFAHLCRVELSDAHSLLAGHC*VGARSS
Trigger: AGAGGAACGAGCTCCGACTCAGCAGTGACCGGCTAG...CAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACTCTCGGCTGCCCGAATaGGCCGGGCTTCCATCACTT +
Preference number: 4 (lower is better)
Translates to: HLCRVELSDAHSLESPPDSRLPE*AGLPSL
Trigger: AAGTGATGGAAGCCCGGCTCATTCGGGCAGCCGAGA...GTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACGGAGCCGCTTCTTGGTaGAGTCCACCTCCCGAACAG +
Preference number: 4 (lower is better)
Translates to: HLCRVELSDAHSLESPPDGAASW*SPPPEQ
Trigger: CTGTTCGGGAGGTGGACTTCACCAAGAAGCGGCTCC...GTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGCCCGGAGCTGCTTCTTaGCCTTGGCCAGAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: RLCFAHLCRVELSDAHSLPGAAS*PWPEKP
Trigger: AGGCTTCTCTGGCCAAGGTCAAGAAGCAGCTCCGGG...CAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp GCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCGGAGCTGCTTCTTaGCCTTGGCCAGAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: ASPTSAAWSCQTPTAWKVPGAAS*PWPEKP
Trigger: AGGCTTCTCTGGCCAAGGTCAAGAAGCAGCTCCGGG...GACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp GCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCTCTTCCTGGTCCTTaGCCTTGGCCTCCAAGTCCC +
Preference number: 4 (lower is better)
Translates to: ASPTSAAWSCQTPTAWKVPLPGP*PWPPSP
Trigger: GGGACTTGGAGGCCAAGGTCAAGGACCAGGAAGAGG...GACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACTCGCTTCCTGCCTGCTaGCGAGGGACTTGTCCACCA +
Preference number: 4 (lower is better)
Translates to: HLCRVELSDAHSLESPPDSLPAC*RGTCPP
Trigger: TGGTGGACAAGTCCCTCGTCAGCAGGCAGGAAGCGA...GTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp GCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCGTGTCTCCAGCTCCCTaGTCTTCGCTTCCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: ASPTSAAWSCQTPTAWKVVSPAP*SSLPAC
Trigger: GCAGGCAGGAAGCGAAGATCAGGGAGCTGGAGACAC...GACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCGTGTCTCCAGCTCCCTaGTCTTCGCTTCCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSVSPAP*SSLPAC
Trigger: GCAGGCAGGAAGCGAAGATCAGGGAGCTGGAGACAC...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp GCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCTTGACAACCAGGACTTaGCCCCGTCGACCCGGTCCT +
Preference number: 4 (lower is better)
Translates to: ASPTSAAWSCQTPTAWKVLTTRT*PRRPGP
Trigger: AGGACCGGGTCGACGGGGTCAAGTCCTGGTTGTCAA...GACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGTTGACAACCAGGACTTaGCCCCGTCGACCCGGTCCT +
Preference number: 4 (lower is better)
Translates to: RLCFAHLCRVELSDAHSLLTTRT*PRRPGP
Trigger: AGGACCGGGTCGACGGGGTCAAGTCCTGGTTGTCAA...CAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCCACTGGAGCTGGCTGTaGTTAGGTGTCCTGAGTCCA +
Preference number: 4 (lower is better)
Translates to: RPPLPRGAVRRPQPGKSPHWSWL*LGVLSP
Trigger: TGGACTCAGGACACCTAAGCACAGCCAGCTCCAGTG...GGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR GCA 90 bp GCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCGATGGGGCTGCAGAGTaGTCTGAGGGGGTTGAGGTC +
Preference number: 4 (lower is better)
Translates to: ASPTSAAWSCQTPTAWKVDGAAE*SEGVEV
Trigger: GACCTCAACCCCCTCAGAGCACTCTGCAGCCCCATC...GACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR GCA 90 bp GCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCAGCGTAGATGTGGGGTaGCATGTCCTCCCGCCGACA +
Preference number: 4 (lower is better)
Translates to: ASPTSAAWSCQTPTAWKVSVDVG*HVLPPT
Trigger: TGTCGGCGGGAGGACATGGCACCCCACATCTACGCT...GACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCAGGGTGGACAGAGCCTaGCACTTCTCCACTGAGAAC +
Preference number: 4 (lower is better)
Translates to: RPPLPRGAVRRPQPGKSPRVDRA*HFSTEN
Trigger: GTTCTCAGTGGAGAAGTGGCAGGCTCTGTCCACCCT...GGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCAAGGAGGTGGACCGTTaGAGGGTGCCTCCTTTTAGC +
Preference number: 4 (lower is better)
Translates to: RPPLPRGAVRRPQPGKSPKEVDR*RVPPFS
Trigger: GCTAAAAGGAGGCACCCTGCAACGGTCCACCTCCTT...GGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCGAGCACTCAGTTTGGTaGCCTCTCCCAGGCCGCTCT +
Preference number: 4 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSEHSVW*PLPGRS
Trigger: AGAGCGGCCTGGGAGAGGGCACCAAACTGAGTGCTC...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp ACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACACGCACCAGGCACCAGTaGCTCCTCTTCCAGGAGCCA +
Preference number: 4 (lower is better)
Translates to: TSAAWSCQTPTAWKVPLTRTRHQ*LLFQEP
Trigger: TGGCTCCTGGAAGAGGAGGCACTGGTGCCTGGTGCG...TGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCAAGAGCACCGTGGCACTaGCCGCCCGGCCCAGAAACA +
Preference number: 4 (lower is better)
Translates to: FGETLLRPPLPRGAVRRPRAPWH*PPGPET
Trigger: TGTTTCTGGGCCGGGCGGGCAGTGCCACGGTGCTCT...TGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCAACCTTGGCGGTACATaGGCATCGCATCAAGCAGGC +
Preference number: 4 (lower is better)
Translates to: RPPLPRGAVRRPQPGKSPNLGGT*ASHQAG
Trigger: GCCTGCTTGATGCGATGCGCATGTACCGCCAAGGTT...GGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACGGCCCAGACAGCAGCTaGTCTTTTCCAGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: HLCRVELSDAHSLESPPDGPDSS*SFPGPG
Trigger: CCCTGGACCTGGAAAAGAGCAGCTGCTGTCTGGGCC...GTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCGGCCCAGACAGCAGCTaGTCTTTTCCAGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: ASPTSAAWSCQTPTAWKVGPDSS*SFPGPG
Trigger: CCCTGGACCTGGAAAAGAGCAGCTGCTGTCTGGGCC...GACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCGTGCCAACGTGCCTaGCCGGAAGAACACCCGGCT +
Preference number: 4 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRPCQRA*PEEHPA
Trigger: AGCCGGGTGTTCTTCCGGGCAGGCACGTTGGCACGG...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCCGTGCCAACGTGCCTaGCCGGAAGAACACCCGGCT +
Preference number: 4 (lower is better)
Translates to: SLERLCFAHLCRVELSDAPCQRA*PEEHPA
Trigger: AGCCGGGTGTTCTTCCGGGCAGGCACGTTGGCACGG...GGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCCCAACCGTGCCAACGTaGCTGCCCGGAAGAACACCC +
Preference number: 4 (lower is better)
Translates to: AAWSCQTPTAWKVPLTESPTVPT*LPGRTP
Trigger: GGGTGTTCTTCCGGGCAGGCACGTTGGCACGGTTGG...GCTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp ACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACACCAACCGTGCCAACGTaGCTGCCCGGAAGAACACCC +
Preference number: 4 (lower is better)
Translates to: TSAAWSCQTPTAWKVPLTPTVPT*LPGRTP
Trigger: GGGTGTTCTTCCGGGCAGGCACGTTGGCACGGTTGG...TGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGACCAACCGTGCCAACGTaGCTGCCCGGAAGAACACCC +
Preference number: 4 (lower is better)
Translates to: LCRVELSDAHSLESPPDRPTVPT*LPGRTP
Trigger: GGGTGTTCTTCCGGGCAGGCACGTTGGCACGGTTGG...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGGTAGCCCCGGCAGGCTaGCTGGAACAGGGTCAGGTG +
Preference number: 4 (lower is better)
Translates to: CRVELSDAHSLESPPDRKVAPAG*LEQGQV
Trigger: CACCTGACCCTGTTCCAGGCAGCCTGCCGGGGCTAC...CTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCGTAGCCCCGGCAGGCTaGCTGGAACAGGGTCAGGTG +
Preference number: 4 (lower is better)
Translates to: SLERLCFAHLCRVELSDAVAPAG*LEQGQV
Trigger: CACCTGACCCTGTTCCAGGCAGCCTGCCGGGGCTAC...GGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCAGCTTGCTGCGCAGCTaGTGGATCTCCTCGTCTTTG +
Preference number: 4 (lower is better)
Translates to: RPPLPRGAVRRPQPGKSPSLLRS*WISSSL
Trigger: CAAAGACGAGGAGATCCAGCAGCTGCGCAGCAAGCT...GGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCCCACCTTCTCAAGCTTaGTGCGCAGCTGCTGGATCT +
Preference number: 4 (lower is better)
Translates to: RPPLPRGAVRRPQPGKSPPPSQA*CAAAGS
Trigger: AGATCCAGCAGCTGCGCAGCAAGCTTGAGAAGGTGG...GGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCG
64% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACCCCGTTGATCTCGGCTaGCCGAATGAGCCGGGCTTC +
Preference number: 4 (lower is better)
Translates to: LERLCFAHLCRVELSDAHPVDLG*PNEPGF
Trigger: GAAGCCCGGCTCATTCGGGCAGCCGAGATCAACGGG...GTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGTCTCCAGCTGCCTCCTaGTCTGCTGTTCCACCTCCA +
Preference number: 4 (lower is better)
Translates to: PTSAAWSCQTPTAWKVPLSPAAS*SAVPPP
Trigger: TGGAGGTGGAACAGCAGAGCAGGAGGCAGCTGGAGA...CAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCGCCTCTCCAGCTaGCTCCTGCTCTGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: LERLCFAHLCRVELSDAHSRLSS*LLLCCS
Trigger: GGAACAGCAGAGCAGGAGGCAGCTGGAGAGGCGGCT...GTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTAGCCGCCTCTCCAGCTaGCTCCTGCTCTGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: CFAHLCRVELSDAHSLESSRLSS*LLLCCS
Trigger: GGAACAGCAGAGCAGGAGGCAGCTGGAGAGGCGGCT...ACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAGCCGCCTCTCCAGCTaGCTCCTGCTCTGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: LCRVELSDAHSLESPPDRSRLSS*LLLCCS
Trigger: GGAACAGCAGAGCAGGAGGCAGCTGGAGAGGCGGCT...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCAGCCGCCTCTCCAGCTaGCTCCTGCTCTGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: LWRDSASPTSAAWSCQTPSRLSS*LLLCCS
Trigger: GGAACAGCAGAGCAGGAGGCAGCTGGAGAGGCGGCT...GGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGCAGCTTGGTGTCCTaGAGCTCAGCTGTGAGCCTT +
Preference number: 4 (lower is better)
Translates to: RPPLPRGAVRRPQPGKSPCSLVS*SSAVSL
Trigger: AAGGCTCACAGCTGAGCTGCAGGACACCAAGCTGCA...GGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCTCGTGGTTTCGGACCTaGTGGCCCTCCAGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: AAWSCQTPTAWKVPLTESSWFRT*WPSRCS
Trigger: GCTGCACCTGGAGGGCCAGCAGGTCCGAAACCACGA...GCTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTTCGTGGTTTCGGACCTaGTGGCCCTCCAGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: CFAHLCRVELSDAHSLESSWFRT*WPSRCS
Trigger: GCTGCACCTGGAGGGCCAGCAGGTCCGAAACCACGA...ACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp ACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACATCGTGGTTTCGGACCTaGTGGCCCTCCAGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: TSAAWSCQTPTAWKVPLTSWFRT*WPSRCS
Trigger: GCTGCACCTGGAGGGCCAGCAGGTCCGAAACCACGA...TGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCTGCAGCTTCTCCCGCTaGGTCTCCTCGTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRCSFSR*VSSWAW
Trigger: CCAGGCCCACGAGGAGACGCAGCGGGAGAAGCTGCA...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGGCAGGCAGAGCTGGAAGCCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTTGCAGCTTCTCCCGCTaGGTCTCCTCGTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: RQAELEAAGGCRWKRSALCSFSR*VSSWAW
Trigger: CCAGGCCCACGAGGAGACGCAGCGGGAGAAGCTGCA...AAGAGCTGATCTCTTCCACCTGCACCCACCCGCGGCTTCCAGCTCTGCCTGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCTGCAGCTTCTCCCGCTaGGTCTCCTCGTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SLERLCFAHLCRVELSDACSFSR*VSSWAW
Trigger: CCAGGCCCACGAGGAGACGCAGCGGGAGAAGCTGCA...GGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCCCCACCCTGCCTCCAAAGAACCAGGGCCCCGGCTCTGCTAACCGCTGTCCCTGGAGTTTCTCCCTCTaGAGCTTCTCCCGCTGCGTC +
Preference number: 4 (lower is better)
Translates to: LPTLPPKNQGPGSANRCPWSFSL*SFSRCV
Trigger: GACGCAGCGGGAGAAGCTGCAGAGGGAGAAACTCCA...GGGACAGCGGTTAGCAGAGCCGGGGCCCTGGTTCTTTGGAGGCAGGGTGGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGTGGAGTTTCTCCCTCTaGAGCTTCTCCCGCTGCGTC +
Preference number: 4 (lower is better)
Translates to: PTSAAWSCQTPTAWKVPLWSFSL*SFSRCV
Trigger: GACGCAGCGGGAGAAGCTGCAGAGGGAGAAACTCCA...CAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGGGCCTGGGCCACAGCTaGCTTGTGCTTCTTCATCAG +
Preference number: 4 (lower is better)
Translates to: PTSAAWSCQTPTAWKVPLGLGHS*LVLLHQ
Trigger: CTGATGAAGAAGCACAAGGCAGCTGTGGCCCAGGCC...CAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGGCTCCTCGCACCTCCTaGCCTGGGCCTGGTCAGGTT +
Preference number: 4 (lower is better)
Translates to: CRVELSDAHSLESPPDRKAPRTS*PGPGQV
Trigger: AACCTGACCAGGCCCAGGGCAGGAGGTGCGAGGAGC...CTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS-3UTR GCA 90 bp TGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGGCGGGAAGAGACATCTaGGGCAGAGGCAGAGCGGCG +
Preference number: 4 (lower is better)
Translates to: CRVELSDAHSLESPPDRKAGRDI*GRGRAA
Trigger: CGCCGCTCTGCCTCTGCCGCAGATGTCTCTTCCCGC...CTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS-3UTR GCA 90 bp CCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGGCTTGCTTCGGCTTTTaGGGCCACTGCGGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: PTSAAWSCQTPTAWKVPLACFGF*GHCGKR
Trigger: TCTCTTCCCGCAGTGGCCGCAAAAGCCGAAGCAAGC...CAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS-3UTR CCA 90 bp TTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCAGGAGGTGGTGGTaGCACCAGAGCGGGAAGACG +
Preference number: 4 (lower is better)
Translates to: LERLCFAHLCRVELSDAHSRRWW*HQSGKT
Trigger: CGTCTTCCCGCTCTGGTGCCACCACCACCTCCTGCT...GTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CCA 90 bp GCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCAGCAGGAGGTGGTGGTaGCACCAGAGCGGGAAGACG +
Preference number: 4 (lower is better)
Translates to: AAWSCQTPTAWKVPLTESSRRWW*HQSGKT
Trigger: CGTCTTCCCGCTCTGGTGCCACCACCACCTCCTGCT...GCTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CCA 90 bp ACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAGAGCAGGAGGTGGTaGTGGCACCAGAGCGGGAAG +
Preference number: 4 (lower is better)
Translates to: TSAAWSCQTPTAWKVPLTESRRW*WHQSGK
Trigger: CTTCCCGCTCTGGTGCCACCACCACCTCCTGCTCTC...TGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CCA 90 bp TGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCCAAGGCCAGGTCCTTaGTGCCTGCCCCTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: CRVELSDAHSLESPPDRKPRPGP*CLPLAQ
Trigger: CTGAGCCAGGGGCAGGCACCAAGGACCTGGCCTTGG...CTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CCA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCACCAGTCGATCTCCTaGTACCAGCCCCAAGGCCAG +
Preference number: 4 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSHQSIS*YQPQGQ
Trigger: CTGGCCTTGGGGCTGGTACCAGGAGATCGACTGGTG...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CCA 90 bp CACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGGATGGCTCCGTCATaGTCCAGCTTCACACGCGCC +
Preference number: 4 (lower is better)
Translates to: HLCRVELSDAHSLESPPDRMAPS*SSFTRA
Trigger: GGCGCGTGTGAAGCTGGACCATGACGGAGCCATCCT...GTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGAGGATGGCTCCGTCATaGTCCAGCTTCACACGCGCC +
Preference number: 4 (lower is better)
Translates to: RLCFAHLCRVELSDAHSLRMAPS*SSFTRA
Trigger: GGCGCGTGTGAAGCTGGACCATGACGGAGCCATCCT...CAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCAGGATGGCTCCGTCATaGTCCAGCTTCACACGCGCC +
Preference number: 4 (lower is better)
Translates to: ASPTSAAWSCQTPTAWKVRMAPS*SSFTRA
Trigger: GGCGCGTGTGAAGCTGGACCATGACGGAGCCATCCT...GACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCCATCCACATCCAGGATaGCTCCGTCATGGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: RPPLPRGAVRRPQPGKSPHPHPG*LRHGPA
Trigger: AGCTGGACCATGACGGAGCCATCCTGGATGTGGATG...GGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCTCCAGGGAGAGGATCTaGGAGAAGCGGGTGGCACTG +
Preference number: 4 (lower is better)
Translates to: ASPTSAAWSCQTPTAWKVSRERI*EKRVAL
Trigger: CAGTGCCACCCGCTTCTCCCAGATCCTCTCCCTGGA...GACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCGCCACCTGGCCAGCTTaGTCAAAGTCCAGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: ASPTSAAWSCQTPTAWKVATWPA*SKSRER
Trigger: CCTCTCCCTGGACTTTGACCAAGCTGGCCAGGTGGC...GACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACGAGGCCGAAGCCACCTaGCCAGCTTGGTCAAAGTCC +
Preference number: 4 (lower is better)
Translates to: HLCRVELSDAHSLESPPDEAEAT*PAWSKS
Trigger: GGACTTTGACCAAGCTGGCCAGGTGGCTTCGGCCTC...GTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCGAGGCCGAAGCCACCTaGCCAGCTTGGTCAAAGTCC +
Preference number: 4 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSEAEAT*PAWSKS
Trigger: GGACTTTGACCAAGCTGGCCAGGTGGCTTCGGCCTC...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGAAGTAGCCTCACTGGCTaGGCGCCGGGCCACACGCAG +
Preference number: 4 (lower is better)
Translates to: ALFGETLLRPPLPRGAVRSSLTG*APGHTQ
Trigger: CTGCGTGTGGCCCGGCGCCCAGCCAGTGAGGCTACT...TCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCCCCACCCTGCCTCCAAAGAACCAGGGCCCCGGCTCTGCTAACCGCTGTCCCGCCAAGTGGTTCAGGTaGAGCTCTGTCCTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: LPTLPPKNQGPGSANRCPAKWFR*SSVLRV
Trigger: CACCCTCAGGACAGAGCTCCACCTGAACCACTTGGC...GGGACAGCGGTTAGCAGAGCCGGGGCCCTGGTTCTTTGGAGGCAGGGTGGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCGTTCCTCGGGGGAGATaGCCAGCACCTTCATGGCAG +
Preference number: 4 (lower is better)
Translates to: ASPTSAAWSCQTPTAWKVVPRGR*PAPSWQ
Trigger: CTGCCATGAAGGTGCTGGCCATCTCCCCCGAGGAAC...GACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTTCTGGGCCCATTCGTaGCGGGCAAACTGCTTTCGT +
Preference number: 4 (lower is better)
Translates to: RPPLPRGAVRRPQPGKSPFWAHS*RANCFR
Trigger: ACGAAAGCAGTTTGCCCGCCACGAATGGGCCCAGAA...GGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp ACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACACCTGACGGAAGGAGGTaGACCGTTGCAGGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: TSAAWSCQTPTAWKVPLTPDGRR*TVAGCL
Trigger: GAGGCACCCTGCAACGGTCCACCTCCTTCCGTCAGG...TGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCTGACGGAAGGAGGTaGACCGTTGCAGGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: CFAHLCRVELSDAHSLESPDGRR*TVAGCL
Trigger: GAGGCACCCTGCAACGGTCCACCTCCTTCCGTCAGG...ACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCCCTGACGGAAGGAGGTaGACCGTTGCAGGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: AAWSCQTPTAWKVPLTESPDGRR*TVAGCL
Trigger: GAGGCACCCTGCAACGGTCCACCTCCTTCCGTCAGG...GCTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACCCAGAGCACTCAGTTTaGTGCCCTCTCCCAGGCCGC +
Preference number: 4 (lower is better)
Translates to: LERLCFAHLCRVELSDAHPEHSV*CPLPGR
Trigger: GCGGCCTGGGAGAGGGCACCAAACTGAGTGCTCTGG...GTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGCCCCATTCAGGGTTCTaGAAGCCTGGTGTGTCCACG +
Preference number: 4 (lower is better)
Translates to: PTSAAWSCQTPTAWKVPLPHSGF*KPGVST
Trigger: CGTGGACACACCAGGCTTCCAGAACCCTGAATGGGG...CAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAACCAGGTGGGAAGCCTaGTCCACAGCAGCCACGGAG +
Preference number: 4 (lower is better)
Translates to: LCRVELSDAHSLESPPDRTRWEA*STAATE
Trigger: CTCCGTGGCTGCTGTGGACCAGGCTTCCCACCTGGT...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp ACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAACCAGGTGGGAAGCCTaGTCCACAGCAGCCACGGAG +
Preference number: 4 (lower is better)
Translates to: TSAAWSCQTPTAWKVPLTTRWEA*STAATE
Trigger: CTCCGTGGCTGCTGTGGACCAGGCTTCCCACCTGGT...TGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGTTGGTACCGTGGCTGTaGCCCAGGAGAAAGTGCCGA +
Preference number: 4 (lower is better)
Translates to: PTSAAWSCQTPTAWKVPLLVPWL*PRRKCR
Trigger: TCGGCACTTTCTCCTGGGCCACAGCCACGGTACCAA...CAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCCCCACCCTGCCTCCAAAGAACCAGGGCCCCGGCTCTGCTAACCGCTGTCCCACCCAGTTGGTACCGTaGCTGTGGCCCAGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: LPTLPPKNQGPGSANRCPTQLVP*LWPRRK
Trigger: CTTTCTCCTGGGCCACAGCCACGGTACCAACTGGGT...GGGACAGCGGTTAGCAGAGCCGGGGCCCTGGTTCTTTGGAGGCAGGGTGGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGGGGGTGCATTCTGGGTaGCTGGGTTCTGCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: PTSAAWSCQTPTAWKVPLGVHSG*LGSAWC
Trigger: ACACCAAGCAGAACCCAGCCACCCAGAATGCACCCC...CAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCAGCCGGGGTGCATTCTaGGTGGCTGGGTTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSSRGAF*VAGFCL
Trigger: CAAGCAGAACCCAGCCACCCAGAATGCACCCCGGCT...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACCGGCGCAAGGCCAGCTaGGAGCCACCTTCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: LSLERLCFAHLCRVELSDRRKAS*EPPSRP
Trigger: AGGCCTGGAAGGTGGCTCCCAGCTGGCCTTGCGCCG...GTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCCTCCAGGTGCAGCTTaGTGTCCTGCAGCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSPPGAA*CPAAQL
Trigger: CAGCTGAGCTGCAGGACACCAAGCTGCACCTGGAGG...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCTGGTTTCGGACCTGCTaGCCCTCCAGGTGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: ASPTSAAWSCQTPTAWKVWFRTC*PSRCSL
Trigger: CAAGCTGCACCTGGAGGGCCAGCAGGTCCGAAACCA...GACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACTGGTTTCGGACCTGCTaGCCCTCCAGGTGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: HLCRVELSDAHSLESPPDWFRTC*PSRCSL
Trigger: CAAGCTGCACCTGGAGGGCCAGCAGGTCCGAAACCA...GTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCTGGTTTCGGACCTGCTaGCCCTCCAGGTGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSWFRTC*PSRCSL
Trigger: CAAGCTGCACCTGGAGGGCCAGCAGGTCCGAAACCA...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTCTCCAGACGCAGCTTaGCCTGCTCCAGCATCTGTA +
Preference number: 4 (lower is better)
Translates to: RPPLPRGAVRRPQPGKSPSPDAA*PAPASV
Trigger: TACAGATGCTGGAGCAGGCCAAGCTGCGTCTGGAGA...GGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGCTGCCAGCAGCGCTTTaGTGCGCTTCAGGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: PTSAAWSCQTPTAWKVPLLPAAL*CASGLS
Trigger: GGAAAGACCTGAAGCGCACCAAAGCGCTGCTGGCAG...CAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCATGTCCCGGGAGGCCTaGGCCACAGCTGCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: SLERLCFAHLCRVELSDAMSREA*ATAALC
Trigger: GCACAAGGCAGCTGTGGCCCAGGCCTCCCGGGACAT...GGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAATGTCCCGGGAGGCCTaGGCCACAGCTGCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: SAAWSCQTPTAWKVPLTEMSREA*ATAALC
Trigger: GCACAAGGCAGCTGTGGCCCAGGCCTCCCGGGACAT...TTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGATGTCCCGGGAGGCCTaGGCCACAGCTGCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: CRVELSDAHSLESPPDRKMSREA*ATAALC
Trigger: GCACAAGGCAGCTGTGGCCCAGGCCTCCCGGGACAT...CTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCCCCACCCTGCCTCCAAAGAACCAGGGCCCCGGCTCTGCTAACCGCTGTCCCCCTCGGCTTCCTTCCTaGCAAGCTCGCTCATCTCCT +
Preference number: 4 (lower is better)
Translates to: LPTLPPKNQGPGSANRCPPRLPS*QARSSP
Trigger: AGGAGATGAGCGAGCTTGCCAGGAAGGAAGCCGAGG...GGGACAGCGGTTAGCAGAGCCGGGGCCCTGGTTCTTTGGAGGCAGGGTGGGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACTGGGTCAGGGGCGAGTaGCTTCCAGTGGCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: LERLCFAHLCRVELSDAHWVRGE*LPVAGW
Trigger: CCAACCAGCCACTGGAAGCCACTCGCCCCTGACCCA...GTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCTGGGTCAGGGGCGAGTaGCTTCCAGTGGCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: LWRDSASPTSAAWSCQTPWVRGE*LPVAGW
Trigger: CCAACCAGCCACTGGAAGCCACTCGCCCCTGACCCA...GGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGGTCTCTGTCAGCTTaGCCTCTGTGTCGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: RPPLPRGAVRRPQPGKSPWSLSA*PLCRCH
Trigger: GTGACAGCGACACAGAGGCCAAGCTGACAGAGACCA...GGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCGAAGAGCCCCGTGGCTaGGGTGGCACAGACAGGCTT +
Preference number: 4 (lower is better)
Translates to: LWRDSASPTSAAWSCQTPEEPRG*GGTDRL
Trigger: AAGCCTGTCTGTGCCACCCCAGCCACGGGGCTCTTC...GGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS-3UTR CCA 90 bp TGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGGCTGCTGCCCCTCTCTaGGTGCTCCAGCTGTGCGCT +
Preference number: 4 (lower is better)
Translates to: CRVELSDAHSLESPPDRKAAAPL*VLQLCA
Trigger: AGCGCACAGCTGGAGCACCCAGAGAGGGGCAGCAGC...CTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS-3UTR CCA 90 bp GCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCTATGGCCGGAGACGGTaGAGCCACTGGATGACGAGG +
Preference number: 4 (lower is better)
Translates to: ASPTSAAWSCQTPTAWKVYGRRR*SHWMTR
Trigger: CCTCGTCATCCAGTGGCTCCACCGTCTCCGGCCATA...GACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS-3UTR TCA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAGTTCTGCTTGGCCAGTaGACCGAACTTGGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: LCRVELSDAHSLESPPDRVLLGQ*TELGCP
Trigger: CGGGCAGCCAAGTTCGGTTCACTGGCCAAGCAGAAC...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR TCA 90 bp GCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCGTTCTGCTTGGCCAGTaGACCGAACTTGGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: AAWSCQTPTAWKVPLTESVLLGQ*TELGCP
Trigger: CGGGCAGCCAAGTTCGGTTCACTGGCCAAGCAGAAC...GCTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR TCA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGACACCTCTACCTGAGGTaGTGGGGCTGCAGAGTGCTC +
Preference number: 4 (lower is better)
Translates to: LCRVELSDAHSLESPPDRHLYLR*WGCRVL
Trigger: GAGCACTCTGCAGCCCCATCACCTCAGGTAGAGGTG...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR TCA 90 bp CTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCCACCTCTACCTGAGGTaGTGGGGCTGCAGAGTGCTC +
Preference number: 4 (lower is better)
Translates to: LWRDSASPTSAAWSCQTPHLYLR*WGCRVL
Trigger: GAGCACTCTGCAGCCCCATCACCTCAGGTAGAGGTG...GGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR TCA 90 bp CTCCCCACCCTGCCTCCAAAGAACCAGGGCCCCGGCTCTGCTAACCGCTGTCCCGTGCATCACCTTCTCTaGATACACAGCAGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: LPTLPPKNQGPGSANRCPVHHLL*IHSRSP
Trigger: GGGGCTCCTGCTGTGTATTCAGAGAAGGTGATGCAC...GGGACAGCGGTTAGCAGAGCCGGGGCCCTGGTTCTTTGGAGGCAGGGTGGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCCCGCCGACACCCCTTaGACATGTGCATCACCTTCT +
Preference number: 4 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSPADTP*TCASPS
Trigger: AGAAGGTGATGCACATGTTCAAGGGGTGTCGGCGGG...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp GCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCGCCGACACCCCTTaGACATGTGCATCACCTTCT +
Preference number: 4 (lower is better)
Translates to: ASPTSAAWSCQTPTAWKVPADTP*TCASPS
Trigger: AGAAGGTGATGCACATGTTCAAGGGGTGTCGGCGGG...GACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp GCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGAGGTGGAGCTCTGTCCTaGGGGTGGCATCCCCACAGG +
Preference number: 4 (lower is better)
Translates to: ALFGETLLRPPLPRGAVRGGALS*GWHPHR
Trigger: CCTGTGGGGATGCCACCCTCAGGACAGAGCTCCACC...TCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCGGTGGAGCTCTGTCCTaGGGGTGGCATCCCCACAGG +
Preference number: 4 (lower is better)
Translates to: KPRCFPCRSAVRWGQWCPGGALS*GWHPHR
Trigger: CCTGTGGGGATGCCACCCTCAGGACAGAGCTCCACC...GGGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGCTCTCCTCAGGGCCCTaGCGGAAGGAGGTGGACCGT +
Preference number: 4 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQLSSGP*RKEVDR
Trigger: ACGGTCCACCTCCTTCCGTCAGGGCCCTGAGGAGAG...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCAGTGCTGGCTGGACTTaGGAGCCCTGTTTACCAGGG +
Preference number: 4 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSSAGWT*EPCLPG
Trigger: CCCTGGTAAACAGGGCTCTCAAGTCCAGCCAGCACT...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp GCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCAGTGCTGGCTGGACTTaGGAGCCCTGTTTACCAGGG +
Preference number: 4 (lower is better)
Translates to: ASPTSAAWSCQTPTAWKVSAGWT*EPCLPG
Trigger: CCCTGGTAAACAGGGCTCTCAAGTCCAGCCAGCACT...GACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp TCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCATCGGCATGGGCCAGTaGGCGAACCAGGTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: SLERLCFAHLCRVELSDAIGMGQ*ANQVGS
Trigger: GCTTCCCACCTGGTTCGCTCACTGGCCCATGCCGAT...GGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCTGCAATCGAGCCTaGGAGCACCGTGGCACTGCC +
Preference number: 4 (lower is better)
Translates to: LSLERLCFAHLCRVELSDACNRA*EHRGTA
Trigger: GGCAGTGCCACGGTGCTCTCAGGCTCGATTGCAGGC...GTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp GCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGAGCCTGCAATCGAGCCTaGGAGCACCGTGGCACTGCC +
Preference number: 4 (lower is better)
Translates to: ALFGETLLRPPLPRGAVRACNRA*EHRGTA
Trigger: GGCAGTGCCACGGTGCTCTCAGGCTCGATTGCAGGC...TCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp ACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACACGGCCATGCCGGTGGTaGAGGTTTTCCTCATGCTGG +
Preference number: 4 (lower is better)
Translates to: TSAAWSCQTPTAWKVPLTRPCRW*RFSSCW
Trigger: CCAGCATGAGGAAAACCTTCACCACCGGCATGGCCG...TGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp GCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCTGCTCCTCTGACAGCTaGACTTGGATGAGGGGCCGC +
Preference number: 4 (lower is better)
Translates to: AAWSCQTPTAWKVPLTESCSSDS*TWMRGR
Trigger: GCGGCCCCTCATCCAAGTTCAGCTGTCAGAGGAGCA...GCTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp ACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACATGCTCCTCTGACAGCTaGACTTGGATGAGGGGCCGC +
Preference number: 4 (lower is better)
Translates to: TSAAWSCQTPTAWKVPLTCSSDS*TWMRGR
Trigger: GCGGCCCCTCATCCAAGTTCAGCTGTCAGAGGAGCA...TGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp TTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACTGCTCCTCTGACAGCTaGACTTGGATGAGGGGCCGC +
Preference number: 4 (lower is better)
Translates to: LERLCFAHLCRVELSDAHCSSDS*TWMRGR
Trigger: GCGGCCCCTCATCCAAGTTCAGCTGTCAGAGGAGCA...GTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp TGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTTGCTCCTCTGACAGCTaGACTTGGATGAGGGGCCGC +
Preference number: 4 (lower is better)
Translates to: CFAHLCRVELSDAHSLESCSSDS*TWMRGR
Trigger: GCGGCCCCTCATCCAAGTTCAGCTGTCAGAGGAGCA...ACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp TTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACCTAGCCGGTCACTGCTaGGTCGGAGCTCGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: LERLCFAHLCRVELSDAHLAGHC*VGARSS
Trigger: AGAGGAACGAGCTCCGACTCAGCAGTGACCGGCTAG...GTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCCTAGCCGGTCACTGCTaGGTCGGAGCTCGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: LWRDSASPTSAAWSCQTPLAGHC*VGARSS
Trigger: AGAGGAACGAGCTCCGACTCAGCAGTGACCGGCTAG...GGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGATCTCGGCTGCCCGAATaGGCCGGGCTTCCATCACTT +
Preference number: 4 (lower is better)
Translates to: LCRVELSDAHSLESPPDRSRLPE*AGLPSL
Trigger: AAGTGATGGAAGCCCGGCTCATTCGGGCAGCCGAGA...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp GCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCTCTCGGCTGCCCGAATaGGCCGGGCTTCCATCACTT +
Preference number: 4 (lower is better)
Translates to: AAWSCQTPTAWKVPLTESSRLPE*AGLPSL
Trigger: AAGTGATGGAAGCCCGGCTCATTCGGGCAGCCGAGA...GCTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCTCTCGGCTGCCCGAATaGGCCGGGCTTCCATCACTT +
Preference number: 4 (lower is better)
Translates to: LWRDSASPTSAAWSCQTPSRLPE*AGLPSL
Trigger: AAGTGATGGAAGCCCGGCTCATTCGGGCAGCCGAGA...GGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAGGAGCCGCTTCTTGGTaGAGTCCACCTCCCGAACAG +
Preference number: 4 (lower is better)
Translates to: LCRVELSDAHSLESPPDRGAASW*SPPPEQ
Trigger: CTGTTCGGGAGGTGGACTTCACCAAGAAGCGGCTCC...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp TGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTGGAGCCGCTTCTTGGTaGAGTCCACCTCCCGAACAG +
Preference number: 4 (lower is better)
Translates to: CFAHLCRVELSDAHSLESGAASW*SPPPEQ
Trigger: CTGTTCGGGAGGTGGACTTCACCAAGAAGCGGCTCC...ACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCGGAGCCGCTTCTTGGTaGAGTCCACCTCCCGAACAG +
Preference number: 4 (lower is better)
Translates to: LWRDSASPTSAAWSCQTPGAASW*SPPPEQ
Trigger: CTGTTCGGGAGGTGGACTTCACCAAGAAGCGGCTCC...GGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp ACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGGAGCCGCTTCTTGGTaGAGTCCACCTCCCGAACAG +
Preference number: 4 (lower is better)
Translates to: TSAAWSCQTPTAWKVPLTGAASW*SPPPEQ
Trigger: CTGTTCGGGAGGTGGACTTCACCAAGAAGCGGCTCC...TGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGCTGCAGTGCCCGTTaGCTCTCATCACTATCTGCT +
Preference number: 4 (lower is better)
Translates to: RPPLPRGAVRRPQPGKSPCCSAR*LSSLSA
Trigger: AGCAGATAGTGATGAGAGTCAACGGGCACTGCAGCA...GGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTTTGGCACTTCTTCTTaGGCTGCTGCAGTGCCCGTT +
Preference number: 4 (lower is better)
Translates to: RPPLPRGAVRRPQPGKSPFGTSS*AAAVPV
Trigger: AACGGGCACTGCAGCAGCTCAAGAAGAAGTGCCAAA...GGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp TGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCGGAGCTGCTTCTTaGCCTTGGCCAGAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: CFAHLCRVELSDAHSLESPGAAS*PWPEKP
Trigger: AGGCTTCTCTGGCCAAGGTCAAGAAGCAGCTCCGGG...ACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp ACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACACCCGGAGCTGCTTCTTaGCCTTGGCCAGAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: TSAAWSCQTPTAWKVPLTPGAAS*PWPEKP
Trigger: AGGCTTCTCTGGCCAAGGTCAAGAAGCAGCTCCGGG...TGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGACCTCTTCCTGGTCCTTaGCCTTGGCCTCCAAGTCCC +
Preference number: 4 (lower is better)
Translates to: LCRVELSDAHSLESPPDRPLPGP*PWPPSP
Trigger: GGGACTTGGAGGCCAAGGTCAAGGACCAGGAAGAGG...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AGCAGGAGGCTGAGATGGAGGTCCACCACCGGCTCCATGGAATGCCAGGCCACCCCTCTTCCTGGTCCTTaGCCTTGGCCTCCAAGTCCC +
Preference number: 4 (lower is better)
Translates to: SRRLRWRSTTGSMECQATPLPGP*PWPPSP
Trigger: GGGACTTGGAGGCCAAGGTCAAGGACCAGGAAGAGG...GGTGGCCTGGCATTCCATGGAGCCGGTGGTGGACCTCCATCTCAGCCTCCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp TTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACCCTCTTCCTGGTCCTTaGCCTTGGCCTCCAAGTCCC +
Preference number: 4 (lower is better)
Translates to: LERLCFAHLCRVELSDAHPLPGP*PWPPSP
Trigger: GGGACTTGGAGGCCAAGGTCAAGGACCAGGAAGAGG...GTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp ACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACACCTCTTCCTGGTCCTTaGCCTTGGCCTCCAAGTCCC +
Preference number: 4 (lower is better)
Translates to: TSAAWSCQTPTAWKVPLTPLPGP*PWPPSP
Trigger: GGGACTTGGAGGCCAAGGTCAAGGACCAGGAAGAGG...TGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGATCGCTTCCTGCCTGCTaGCGAGGGACTTGTCCACCA +
Preference number: 4 (lower is better)
Translates to: LCRVELSDAHSLESPPDRSLPAC*RGTCPP
Trigger: TGGTGGACAAGTCCCTCGTCAGCAGGCAGGAAGCGA...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp TTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACTCGCTTCCTGCCTGCTaGCGAGGGACTTGTCCACCA +
Preference number: 4 (lower is better)
Translates to: LERLCFAHLCRVELSDAHSLPAC*RGTCPP
Trigger: TGGTGGACAAGTCCCTCGTCAGCAGGCAGGAAGCGA...GTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp GCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCGTGTCTCCAGCTCCCTaGTCTTCGCTTCCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: AAWSCQTPTAWKVPLTESVSPAP*SSLPAC
Trigger: GCAGGCAGGAAGCGAAGATCAGGGAGCTGGAGACAC...GCTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGATTGACAACCAGGACTTaGCCCCGTCGACCCGGTCCT +
Preference number: 4 (lower is better)
Translates to: LCRVELSDAHSLESPPDRLTTRT*PRRPGP
Trigger: AGGACCGGGTCGACGGGGTCAAGTCCTGGTTGTCAA...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp ACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACATTGACAACCAGGACTTaGCCCCGTCGACCCGGTCCT +
Preference number: 4 (lower is better)
Translates to: TSAAWSCQTPTAWKVPLTLTTRT*PRRPGP
Trigger: AGGACCGGGTCGACGGGGTCAAGTCCTGGTTGTCAA...TGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AGCAGGAGGCTGAGATGGAGGTCCACCACCGGCTCCATGGAATGCCAGGCCACCTTGACAACCAGGACTTaGCCCCGTCGACCCGGTCCT +
Preference number: 4 (lower is better)
Translates to: SRRLRWRSTTGSMECQATLTTRT*PRRPGP
Trigger: AGGACCGGGTCGACGGGGTCAAGTCCTGGTTGTCAA...GGTGGCCTGGCATTCCATGGAGCCGGTGGTGGACCTCCATCTCAGCCTCCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000135375.4
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCAGGTCCCTTGTTCTTTaGCAACCAGGACTTGACCCC +
Preference number: 4 (lower is better)
Translates to: RPPLPRGAVRRPQPGKSPRSLVL*QPGLDP
Trigger: GGGGTCAAGTCCTGGTTGTCAAAGAACAAGGGACCT...GGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp TTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCATGTCTGGGAAGTCTCTaGGGGTACCGGGCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: FGETLLRPPLPRGAVRRPCLGSL*GYRAGG
Trigger: GCCACCAGCCCGGTACCCTCAGAGACTTCCCAGACA...TGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000167856.8
CDS-3UTR GCA 90 bp CCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGAAAAGCCACGGCGCATaGTCATCTCTTCCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: PTSAAWSCQTPTAWKVPLKSHGA*SSLPGS
Trigger: GGAGCCTGGAAGAGATGAGCATGCGCCGTGGCTTTT...CAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR GCA 90 bp CTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCGATGGGGCTGCAGAGTaGTCTGAGGGGGTTGAGGTC +
Preference number: 4 (lower is better)
Translates to: LWRDSASPTSAAWSCQTPDGAAE*SEGVEV
Trigger: GACCTCAACCCCCTCAGAGCACTCTGCAGCCCCATC...GGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR GCA 90 bp ACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGATGGGGCTGCAGAGTaGTCTGAGGGGGTTGAGGTC +
Preference number: 4 (lower is better)
Translates to: TSAAWSCQTPTAWKVPLTDGAAE*SEGVEV
Trigger: GACCTCAACCCCCTCAGAGCACTCTGCAGCCCCATC...TGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR GCA 90 bp AGGCAGGCAGAGCTGGAAGCCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTAGGCCAGGTCCTTGGTaGCTGCCCCTGGCTCAGCAA +
Preference number: 4 (lower is better)
Translates to: RQAELEAAGGCRWKRSALRPGPW*LPLAQQ
Trigger: TTGCTGAGCCAGGGGCAGGCACCAAGGACCTGGCCT...AAGAGCTGATCTCTTCCACCTGCACCCACCCGCGGCTTCCAGCTCTGCCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
CDS-3UTR GCA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCAGGCCAGGTCCTTGGTaGCTGCCCCTGGCTCAGCAA +
Preference number: 4 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRRPGPW*LPLAQQ
Trigger: TTGCTGAGCCAGGGGCAGGCACCAAGGACCTGGCCT...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR GCA 90 bp CCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGAGGGTGGACAGAGCCTaGCACTTCTCCACTGAGAAC +
Preference number: 4 (lower is better)
Translates to: PTSAAWSCQTPTAWKVPLRVDRA*HFSTEN
Trigger: GTTCTCAGTGGAGAAGTGGCAGGCTCTGTCCACCCT...CAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAGAGCACTCAGTTTGGTaGCCTCTCCCAGGCCGCTCT +
Preference number: 4 (lower is better)
Translates to: LCRVELSDAHSLESPPDREHSVW*PLPGRS
Trigger: AGAGCGGCCTGGGAGAGGGCACCAAACTGAGTGCTC...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTGAGCACTCAGTTTGGTaGCCTCTCCCAGGCCGCTCT +
Preference number: 4 (lower is better)
Translates to: CFAHLCRVELSDAHSLESEHSVW*PLPGRS
Trigger: AGAGCGGCCTGGGAGAGGGCACCAAACTGAGTGCTC...ACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACGCACCAGGCACCAGTaGCTCCTCTTCCAGGAGCCA +
Preference number: 4 (lower is better)
Translates to: FGETLLRPPLPRGAVRRPRTRHQ*LLFQEP
Trigger: TGGCTCCTGGAAGAGGAGGCACTGGTGCCTGGTGCG...TGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCGCACCAGGCACCAGTaGCTCCTCTTCCAGGAGCCA +
Preference number: 4 (lower is better)
Translates to: SLERLCFAHLCRVELSDARTRHQ*LLFQEP
Trigger: TGGCTCCTGGAAGAGGAGGCACTGGTGCCTGGTGCG...GGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGGCAGGCAGAGCTGGAAGCCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTCGCACCAGGCACCAGTaGCTCCTCTTCCAGGAGCCA +
Preference number: 4 (lower is better)
Translates to: RQAELEAAGGCRWKRSALRTRHQ*LLFQEP
Trigger: TGGCTCCTGGAAGAGGAGGCACTGGTGCCTGGTGCG...AAGAGCTGATCTCTTCCACCTGCACCCACCCGCGGCTTCCAGCTCTGCCTGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGAGAGCACCGTGGCACTaGCCGCCCGGCCCAGAAACA +
Preference number: 4 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQRAPWH*PPGPET
Trigger: TGTTTCTGGGCCGGGCGGGCAGTGCCACGGTGCTCT...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCAGAGCACCGTGGCACTaGCCGCCCGGCCCAGAAACA +
Preference number: 4 (lower is better)
Translates to: KPRCFPCRSAVRWGQWCPRAPWH*PPGPET
Trigger: TGTTTCTGGGCCGGGCGGGCAGTGCCACGGTGCTCT...GGGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCGGCCCAGACAGCAGCTaGTCTTTTCCAGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: LWRDSASPTSAAWSCQTPGPDSS*SFPGPG
Trigger: CCCTGGACCTGGAAAAGAGCAGCTGCTGTCTGGGCC...GGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGCAGGAGGCTGAGATGGAGGTCCACCACCGGCTCCATGGAATGCCAGGCCACCGGCCCAGACAGCAGCTaGTCTTTTCCAGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: SRRLRWRSTTGSMECQATGPDSS*SFPGPG
Trigger: CCCTGGACCTGGAAAAGAGCAGCTGCTGTCTGGGCC...GGTGGCCTGGCATTCCATGGAGCCGGTGGTGGACCTCCATCTCAGCCTCCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCGGCCCAGACAGCAGCTaGTCTTTTCCAGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: AAWSCQTPTAWKVPLTESGPDSS*SFPGPG
Trigger: CCCTGGACCTGGAAAAGAGCAGCTGCTGTCTGGGCC...GCTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAACCAACCGTGCCAACGTaGCTGCCCGGAAGAACACCC +
Preference number: 4 (lower is better)
Translates to: SAAWSCQTPTAWKVPLTEPTVPT*LPGRTP
Trigger: GGGTGTTCTTCCGGGCAGGCACGTTGGCACGGTTGG...TTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCAACCGTGCCAACGTaGCTGCCCGGAAGAACACCC +
Preference number: 4 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRPTVPT*LPGRTP
Trigger: GGGTGTTCTTCCGGGCAGGCACGTTGGCACGGTTGG...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGTAGCCCCGGCAGGCTaGCTGGAACAGGGTCAGGTG +
Preference number: 4 (lower is better)
Translates to: LSLERLCFAHLCRVELSDVAPAG*LEQGQV
Trigger: CACCTGACCCTGTTCCAGGCAGCCTGCCGGGGCTAC...GTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCCCCACCCTGCCTCCAAAGAACCAGGGCCCCGGCTCTGCTAACCGCTGTCCCAGCTTGCTGCGCAGCTaGTGGATCTCCTCGTCTTTG +
Preference number: 4 (lower is better)
Translates to: LPTLPPKNQGPGSANRCPSLLRS*WISSSL
Trigger: CAAAGACGAGGAGATCCAGCAGCTGCGCAGCAAGCT...GGGACAGCGGTTAGCAGAGCCGGGGCCCTGGTTCTTTGGAGGCAGGGTGGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGCCTTCTCAAGCTTGCTaGGCAGCTGCTGGATCTCCT +
Preference number: 4 (lower is better)
Translates to: PTSAAWSCQTPTAWKVPLPSQAC*AAAGSP
Trigger: AGGAGATCCAGCAGCTGCGCAGCAAGCTTGAGAAGG...CAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCCCCACCCTGCCTCCAAAGAACCAGGGCCCCGGCTCTGCTAACCGCTGTCCCCCACCTTCTCAAGCTTaGTGCGCAGCTGCTGGATCT +
Preference number: 4 (lower is better)
Translates to: LPTLPPKNQGPGSANRCPPPSQA*CAAAGS
Trigger: AGATCCAGCAGCTGCGCAGCAAGCTTGAGAAGGTGG...GGGACAGCGGTTAGCAGAGCCGGGGCCCTGGTTCTTTGGAGGCAGGGTGGGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACCCGTTGATCTCGGCTaGCCGAATGAGCCGGGCTTC +
Preference number: 4 (lower is better)
Translates to: FGETLLRPPLPRGAVRRPPVDLG*PNEPGF
Trigger: GAAGCCCGGCTCATTCGGGCAGCCGAGATCAACGGG...TGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCAAGCCGCCTCTCCAGCTaGCTCCTGCTCTGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: FGETLLRPPLPRGAVRRPSRLSS*LLLCCS
Trigger: GGAACAGCAGAGCAGGAGGCAGCTGGAGAGGCGGCT...TGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCACTCTCATCACTATCTaGTTGCAGGTCCCCAAGCCG +
Preference number: 4 (lower is better)
Translates to: RPPLPRGAVRRPQPGKSPTLITI*LQVPKP
Trigger: CGGCTTGGGGACCTGCAAGCAGATAGTGATGAGAGT...GGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGTGCAGCTTGGTGTCCTaGAGCTCAGCTGTGAGCCTT +
Preference number: 4 (lower is better)
Translates to: PTSAAWSCQTPTAWKVPLCSLVS*SSAVSL
Trigger: AAGGCTCACAGCTGAGCTGCAGGACACCAAGCTGCA...CAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGGCAGGCAGAGCTGGAAGCCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTTCGTGGTTTCGGACCTaGTGGCCCTCCAGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: RQAELEAAGGCRWKRSALSWFRT*WPSRCS
Trigger: GCTGCACCTGGAGGGCCAGCAGGTCCGAAACCACGA...AAGAGCTGATCTCTTCCACCTGCACCCACCCGCGGCTTCCAGCTCTGCCTGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCATCGTGGTTTCGGACCTaGTGGCCCTCCAGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: FGETLLRPPLPRGAVRRPSWFRT*WPSRCS
Trigger: GCTGCACCTGGAGGGCCAGCAGGTCCGAAACCACGA...TGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCTGCAGCTTCTCCCGCTaGGTCTCCTCGTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: KPRCFPCRSAVRWGQWCPCSFSR*VSSWAW
Trigger: CCAGGCCCACGAGGAGACGCAGCGGGAGAAGCTGCA...GGGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACTGCAGCTTCTCCCGCTaGGTCTCCTCGTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LSLERLCFAHLCRVELSDCSFSR*VSSWAW
Trigger: CCAGGCCCACGAGGAGACGCAGCGGGAGAAGCTGCA...GTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCTGGAGTTTCTCCCTCTaGAGCTTCTCCCGCTGCGTC +
Preference number: 4 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSWSFSL*SFSRCV
Trigger: GACGCAGCGGGAGAAGCTGCAGAGGGAGAAACTCCA...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGTGGAGTTTCTCCCTCTaGAGCTTCTCCCGCTGCGTC +
Preference number: 4 (lower is better)
Translates to: RLCFAHLCRVELSDAHSLWSFSL*SFSRCV
Trigger: GACGCAGCGGGAGAAGCTGCAGAGGGAGAAACTCCA...CAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACTGGAGTTTCTCCCTCTaGAGCTTCTCCCGCTGCGTC +
Preference number: 4 (lower is better)
Translates to: HLCRVELSDAHSLESPPDWSFSL*SFSRCV
Trigger: GACGCAGCGGGAGAAGCTGCAGAGGGAGAAACTCCA...GTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACCATGATCTGGGCATCTaGCAGCAGCGCTTTGGTGCG +
Preference number: 4 (lower is better)
Translates to: HLCRVELSDAHSLESPPDHDLGI*QQRFGA
Trigger: CGCACCAAAGCGCTGCTGGCAGATGCCCAGATCATG...GTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTCGTGGCGGGCAAACTaGTTTCGTCCAGCTTTGGTA +
Preference number: 4 (lower is better)
Translates to: RPPLPRGAVRRPQPGKSPSWRAN*FRPALV
Trigger: TACCAAAGCTGGACGAAAGCAGTTTGCCCGCCACGA...GGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000100794.10
CDS-3UTR GCA 90 bp CTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCGGCTTTTGCGGCCACTaGGGGAAGAGACATCTGCGG +
Preference number: 4 (lower is better)
Translates to: LWRDSASPTSAAWSCQTPGFCGH*GKRHLR
Trigger: CCGCAGATGTCTCTTCCCGCAGTGGCCGCAAAAGCC...GGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS-3UTR CCA 90 bp TTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCAAGCAGGAGGTGGTGGTaGCACCAGAGCGGGAAGACG +
Preference number: 4 (lower is better)
Translates to: FGETLLRPPLPRGAVRRPSRRWW*HQSGKT
Trigger: CGTCTTCCCGCTCTGGTGCCACCACCACCTCCTGCT...TGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CCA 90 bp TCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCAGGAGGTGGTGGTaGCACCAGAGCGGGAAGACG +
Preference number: 4 (lower is better)
Translates to: SAAWSCQTPTAWKVPLTESRRWW*HQSGKT
Trigger: CGTCTTCCCGCTCTGGTGCCACCACCACCTCCTGCT...TTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CCA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCGAGAGCAGGAGGTGGTaGTGGCACCAGAGCGGGAAG +
Preference number: 4 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRESRRW*WHQSGK
Trigger: CTTCCCGCTCTGGTGCCACCACCACCTCCTGCTCTC...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CCA 90 bp AAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCCGGAGAGCAGGAGGTaGTGGTGGCACCAGAGCGGG +
Preference number: 4 (lower is better)
Translates to: KAKVFSMQIGSQVGAVVPPESRR*WWHQSG
Trigger: CCCGCTCTGGTGCCACCACCACCTCCTGCTCTCCGG...GGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CCA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCGGGCCCGATCCAGCATaGTTGTGCGCCGCAGTGAGA +
Preference number: 4 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRGPDPA*LCAAVR
Trigger: TCTCACTGCGGCGCACAACCATGCTGGATCGGGCCC...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CCA 90 bp AAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCCCAAGGCCAGGTCCTTaGTGCCTGCCCCTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: KPRCFPCRSAVRWGQWCPPRPGP*CLPLAQ
Trigger: CTGAGCCAGGGGCAGGCACCAAGGACCTGGCCTTGG...GGGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CCA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGACACCAGTCGATCTCCTaGTACCAGCCCCAAGGCCAG +
Preference number: 4 (lower is better)
Translates to: LCRVELSDAHSLESPPDRHQSIS*YQPQGQ
Trigger: CTGGCCTTGGGGCTGGTACCAGGAGATCGACTGGTG...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CCA 90 bp TGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTAGGATGGCTCCGTCATaGTCCAGCTTCACACGCGCC +
Preference number: 4 (lower is better)
Translates to: CFAHLCRVELSDAHSLESRMAPS*SSFTRA
Trigger: GGCGCGTGTGAAGCTGGACCATGACGGAGCCATCCT...ACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACCCACTGAGAACACCTTaGTCCCACTGGTACCCGCGA +
Preference number: 4 (lower is better)
Translates to: HLCRVELSDAHSLESPPDPLRTP*SHWYPR
Trigger: TCGCGGGTACCAGTGGGACCAAGGTGTTCTCAGTGG...GTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCACTGAGAACACCTTaGTCCCACTGGTACCCGCGA +
Preference number: 4 (lower is better)
Translates to: ASPTSAAWSCQTPTAWKVPLRTP*SHWYPR
Trigger: TCGCGGGTACCAGTGGGACCAAGGTGTTCTCAGTGG...GACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGCCACTGAGAACACCTTaGTCCCACTGGTACCCGCGA +
Preference number: 4 (lower is better)
Translates to: RLCFAHLCRVELSDAHSLPLRTP*SHWYPR
Trigger: TCGCGGGTACCAGTGGGACCAAGGTGTTCTCAGTGG...CAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGCAGGAGGCTGAGATGGAGGTCCACCACCGGCTCCATGGAATGCCAGGCCACCTCCAGGGAGAGGATCTaGGAGAAGCGGGTGGCACTG +
Preference number: 4 (lower is better)
Translates to: SRRLRWRSTTGSMECQATSRERI*EKRVAL
Trigger: CAGTGCCACCCGCTTCTCCCAGATCCTCTCCCTGGA...GGTGGCCTGGCATTCCATGGAGCCGGTGGTGGACCTCCATCTCAGCCTCCTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGATCCAGGGAGAGGATCTaGGAGAAGCGGGTGGCACTG +
Preference number: 4 (lower is better)
Translates to: LCRVELSDAHSLESPPDRSRERI*EKRVAL
Trigger: CAGTGCCACCCGCTTCTCCCAGATCCTCTCCCTGGA...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCGCCACCTGGCCAGCTTaGTCAAAGTCCAGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: AAWSCQTPTAWKVPLTESATWPA*SKSRER
Trigger: CCTCTCCCTGGACTTTGACCAAGCTGGCCAGGTGGC...GCTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCGCCACCTGGCCAGCTTaGTCAAAGTCCAGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: LWRDSASPTSAAWSCQTPATWPA*SKSRER
Trigger: CCTCTCCCTGGACTTTGACCAAGCTGGCCAGGTGGC...GGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAGCCACCTGGCCAGCTTaGTCAAAGTCCAGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: LCRVELSDAHSLESPPDRATWPA*SKSRER
Trigger: CCTCTCCCTGGACTTTGACCAAGCTGGCCAGGTGGC...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp ACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAGGCCGAAGCCACCTaGCCAGCTTGGTCAAAGTCC +
Preference number: 4 (lower is better)
Translates to: TSAAWSCQTPTAWKVPLTEAEAT*PAWSKS
Trigger: GGACTTTGACCAAGCTGGCCAGGTGGCTTCGGCCTC...TGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCGAGGCCGAAGCCACCTaGCCAGCTTGGTCAAAGTCC +
Preference number: 4 (lower is better)
Translates to: AAWSCQTPTAWKVPLTESEAEAT*PAWSKS
Trigger: GGACTTTGACCAAGCTGGCCAGGTGGCTTCGGCCTC...GCTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAGTTCCTCGGGGGAGATaGCCAGCACCTTCATGGCAG +
Preference number: 4 (lower is better)
Translates to: LCRVELSDAHSLESPPDRVPRGR*PAPSWQ
Trigger: CTGCCATGAAGGTGCTGGCCATCTCCCCCGAGGAAC...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCGTTCCTCGGGGGAGATaGCCAGCACCTTCATGGCAG +
Preference number: 4 (lower is better)
Translates to: LWRDSASPTSAAWSCQTPVPRGR*PAPSWQ
Trigger: CTGCCATGAAGGTGCTGGCCATCTCCCCCGAGGAAC...GGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCGTTCCTCGGGGGAGATaGCCAGCACCTTCATGGCAG +
Preference number: 4 (lower is better)
Translates to: AAWSCQTPTAWKVPLTESVPRGR*PAPSWQ
Trigger: CTGCCATGAAGGTGCTGGCCATCTCCCCCGAGGAAC...GCTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGGTATGCTGCCTTCTaGGCCCATTCGTGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: LERLCFAHLCRVELSDAHRYAAF*AHSWRA
Trigger: TGCCCGCCACGAATGGGCCCAGAAGGCAGCATACCT...GTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp ACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAAGGTATGCTGCCTTCTaGGCCCATTCGTGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: TSAAWSCQTPTAWKVPLTRYAAF*AHSWRA
Trigger: TGCCCGCCACGAATGGGCCCAGAAGGCAGCATACCT...TGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCAGGTATGCTGCCTTCTaGGCCCATTCGTGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: LWRDSASPTSAAWSCQTPRYAAF*AHSWRA
Trigger: TGCCCGCCACGAATGGGCCCAGAAGGCAGCATACCT...GGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGGCAGGCAGAGCTGGAAGCCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTCCTGACGGAAGGAGGTaGACCGTTGCAGGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: RQAELEAAGGCRWKRSALPDGRR*TVAGCL
Trigger: GAGGCACCCTGCAACGGTCCACCTCCTTCCGTCAGG...AAGAGCTGATCTCTTCCACCTGCACCCACCCGCGGCTTCCAGCTCTGCCTGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCCTGACGGAAGGAGGTaGACCGTTGCAGGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: SLERLCFAHLCRVELSDAPDGRR*TVAGCL
Trigger: GAGGCACCCTGCAACGGTCCACCTCCTTCCGTCAGG...GGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACCTGACGGAAGGAGGTaGACCGTTGCAGGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: FGETLLRPPLPRGAVRRPPDGRR*TVAGCL
Trigger: GAGGCACCCTGCAACGGTCCACCTCCTTCCGTCAGG...TGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCCAGAGCACTCAGTTTaGTGCCCTCTCCCAGGCCGC +
Preference number: 4 (lower is better)
Translates to: CRVELSDAHSLESPPDRKPEHSV*CPLPGR
Trigger: GCGGCCTGGGAGAGGGCACCAAACTGAGTGCTCTGG...CTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCATTCAGGGTTCTaGAAGCCTGGTGTGTCCACG +
Preference number: 4 (lower is better)
Translates to: ASPTSAAWSCQTPTAWKVPHSGF*KPGVST
Trigger: CGTGGACACACCAGGCTTCCAGAACCCTGAATGGGG...GACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGACCAGGTGGGAAGCCTaGTCCACAGCAGCCACGGAG +
Preference number: 4 (lower is better)
Translates to: CRVELSDAHSLESPPDRKTRWEA*STAATE
Trigger: CTCCGTGGCTGCTGTGGACCAGGCTTCCCACCTGGT...CTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAACCAGGTGGGAAGCCTaGTCCACAGCAGCCACGGAG +
Preference number: 4 (lower is better)
Translates to: SAAWSCQTPTAWKVPLTETRWEA*STAATE
Trigger: CTCCGTGGCTGCTGTGGACCAGGCTTCCCACCTGGT...TTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCAGTGAGCGAACCAGGTaGGAAGCCTGGTCCACAGCA +
Preference number: 4 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSSERTR*EAWSTA
Trigger: TGCTGTGGACCAGGCTTCCCACCTGGTTCGCTCACT...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACACCCAGTTGGTACCGTaGCTGTGGCCCAGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: HLCRVELSDAHSLESPPDTQLVP*LWPRRK
Trigger: CTTTCTCCTGGGCCACAGCCACGGTACCAACTGGGT...GTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCACCCAGTTGGTACCGTaGCTGTGGCCCAGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSTQLVP*LWPRRK
Trigger: CTTTCTCCTGGGCCACAGCCACGGTACCAACTGGGT...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACTGTACTCCACCCAGTTaGTACCGTGGCTGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: HLCRVELSDAHSLESPPDCTPPS*YRGCGP
Trigger: TGGGCCACAGCCACGGTACCAACTGGGTGGAGTACA...GTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACGGGGTGCATTCTGGGTaGCTGGGTTCTGCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: HLCRVELSDAHSLESPPDGVHSG*LGSAWC
Trigger: ACACCAAGCAGAACCCAGCCACCCAGAATGCACCCC...GTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAGCCGGGGTGCATTCTaGGTGGCTGGGTTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: LCRVELSDAHSLESPPDRSRGAF*VAGFCL
Trigger: CAAGCAGAACCCAGCCACCCAGAATGCACCCCGGCT...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCCGGCGCAAGGCCAGCTaGGAGCCACCTTCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: SNGRREGGWQTGPAPGTARRKAS*EPPSRP
Trigger: AGGCCTGGAAGGTGGCTCCCAGCTGGCCTTGCGCCG...GGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTCTGCACACAGCGAATaGCCAGGTCCTGGATCTTTC +
Preference number: 4 (lower is better)
Translates to: RPPLPRGAVRRPQPGKSPSAHSE*PGPGSF
Trigger: GAAAGATCCAGGACCTGGCCATTCGCTGTGTGCAGA...GGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACCCTCCAGGTGCAGCTTaGTGTCCTGCAGCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: LERLCFAHLCRVELSDAHPPGAA*CPAAQL
Trigger: CAGCTGAGCTGCAGGACACCAAGCTGCACCTGGAGG...GTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGTTCTTCTCCAGCTCGTaGTTTCGGACCTGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: RLCFAHLCRVELSDAHSLFFSSS*FRTCWP
Trigger: GGGCCAGCAGGTCCGAAACCACGAGCTGGAGAAGAA...CAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCGTCTCCTCGTGGGCCTaGGAAAGCTCACTGTCGAAC +
Preference number: 4 (lower is better)
Translates to: ASPTSAAWSCQTPTAWKVVSSWA*ESSLSN
Trigger: GTTCGACAGTGAGCTTTCCCAGGCCCACGAGGAGAC...GACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGTCTCCTCGTGGGCCTaGGAAAGCTCACTGTCGAAC +
Preference number: 4 (lower is better)
Translates to: RLCFAHLCRVELSDAHSLVSSWA*ESSLSN
Trigger: GTTCGACAGTGAGCTTTCCCAGGCCCACGAGGAGAC...CAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGCTGCCAGCAGCGCTTTaGTGCGCTTCAGGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: RLCFAHLCRVELSDAHSLLPAAL*CASGLS
Trigger: GGAAAGACCTGAAGCGCACCAAAGCGCTGCTGGCAG...CAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCTGCCAGCAGCGCTTTaGTGCGCTTCAGGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: ASPTSAAWSCQTPTAWKVLPAAL*CASGLS
Trigger: GGAAAGACCTGAAGCGCACCAAAGCGCTGCTGGCAG...GACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGATGTCCCGGGAGGCCTaGGCCACAGCTGCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQMSREA*ATAALC
Trigger: GCACAAGGCAGCTGTGGCCCAGGCCTCCCGGGACAT...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTCCAGGCGCTTCACTTaGGTCTTTTCGAACTCCAGG +
Preference number: 4 (lower is better)
Translates to: RPPLPRGAVRRPQPGKSPSRRFT*VFSNSR
Trigger: CCTGGAGTTCGAAAAGACCCAAGTGAAGCGCCTGGA...GGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCCCCACCCTGCCTCCAAAGAACCAGGGCCCCGGCTCTGCTAACCGCTGTCCCCGCTCATCTCCTCCTTaGTGTCACGAAGCTGTCGCT +
Preference number: 4 (lower is better)
Translates to: LPTLPPKNQGPGSANRCPRSSPP*CHEAVA
Trigger: AGCGACAGCTTCGTGACACCAAGGAGGAGATGAGCG...GGGACAGCGGTTAGCAGAGCCGGGGCCCTGGTTCTTTGGAGGCAGGGTGGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGCGCTCATCTCCTCCTTaGTGTCACGAAGCTGTCGCT +
Preference number: 4 (lower is better)
Translates to: PTSAAWSCQTPTAWKVPLRSSPP*CHEAVA
Trigger: AGCGACAGCTTCGTGACACCAAGGAGGAGATGAGCG...CAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCTCGGCTTCCTTCCTaGCAAGCTCGCTCATCTCCT +
Preference number: 4 (lower is better)
Translates to: ASPTSAAWSCQTPTAWKVPRLPS*QARSSP
Trigger: AGGAGATGAGCGAGCTTGCCAGGAAGGAAGCCGAGG...GACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACCCTCGGCTTCCTTCCTaGCAAGCTCGCTCATCTCCT +
Preference number: 4 (lower is better)
Translates to: HLCRVELSDAHSLESPPDPRLPS*QARSSP
Trigger: AGGAGATGAGCGAGCTTGCCAGGAAGGAAGCCGAGG...GTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGCCTCGGCTTCCTTCCTaGCAAGCTCGCTCATCTCCT +
Preference number: 4 (lower is better)
Translates to: RLCFAHLCRVELSDAHSLPRLPS*QARSSP
Trigger: AGGAGATGAGCGAGCTTGCCAGGAAGGAAGCCGAGG...CAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCCTCGGCTTCCTTCCTaGCAAGCTCGCTCATCTCCT +
Preference number: 4 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSPRLPS*QARSSP
Trigger: AGGAGATGAGCGAGCTTGCCAGGAAGGAAGCCGAGG...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGGTGGCTTCCAGTGGCTaGTTGGGCTGGAACTCTTCA +
Preference number: 4 (lower is better)
Translates to: PTSAAWSCQTPTAWKVPLVASSG*LGWNSS
Trigger: TGAAGAGTTCCAGCCCAACCAGCCACTGGAAGCCAC...CAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCTGGGTCAGGGGCGAGTaGCTTCCAGTGGCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: SLERLCFAHLCRVELSDAWVRGE*LPVAGW
Trigger: CCAACCAGCCACTGGAAGCCACTCGCCCCTGACCCA...GGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCTGGGTCAGGGGCGAGTaGCTTCCAGTGGCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRWVRGE*LPVAGW
Trigger: CCAACCAGCCACTGGAAGCCACTCGCCCCTGACCCA...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCTCCTGCCCTGGGCCTaGTCAGGTTCCTCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: KAKVFSMQIGSQVGAVVPLLPWA*SGSSLG
Trigger: CCCCAGGGAGGAACCTGACCAGGCCCAGGGCAGGAG...GGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS-3UTR CCA 90 bp CTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCGGCAGCCTCCAGGTCTaGATCAAGGTAGGAGTGGCG +
Preference number: 4 (lower is better)
Translates to: LWRDSASPTSAAWSCQTPGSLQV*IKVGVA
Trigger: CGCCACTCCTACCTTGATCCAGACCTGGAGGCTGCC...GGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS-3UTR CCA 90 bp ACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGCGCTCCGGGCACTCTaGATGCTCTTCCGGTCATCA +
Preference number: 4 (lower is better)
Translates to: TSAAWSCQTPTAWKVPLTALRAL*MLFRSS
Trigger: TGATGACCGGAAGAGCATCCAGAGTGCCCGGAGCGC...TGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS-3UTR CCA 90 bp AAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCCAGAGGGCTCCTGGGTaGGGCAGGAGCACCCTACCT +
Preference number: 4 (lower is better)
Translates to: KPRCFPCRSAVRWGQWCPQRAPG*GRSTLP
Trigger: AGGTAGGGTGCTCCTGCCCCACCCAGGAGCCCTCTG...GGGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000168348.8
CDS-3UTR TCA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCGTCCTGAGTCCAGGATaGTGCTACCCCGATTGCTGT +
Preference number: 4 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSVLSPG*CYPDCC
Trigger: ACAGCAATCGGGGTAGCATCATCCTGGACTCAGGAC...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR TCA 90 bp CACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACTGCCTTCTTCACCCTTaGGGTCATCACTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: HLCRVELSDAHSLESPPDCLLHP*GHHWSW
Trigger: CCAGCTCCAGTGATGACCTCAAGGGTGAAGAAGGCA...GTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR TCA 90 bp TCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAGTTCTGCTTGGCCAGTaGACCGAACTTGGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: SAAWSCQTPTAWKVPLTEVLLGQ*TELGCP
Trigger: CGGGCAGCCAAGTTCGGTTCACTGGCCAAGCAGAAC...TTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR TCA 90 bp TTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACACCTCTACCTGAGGTaGTGGGGCTGCAGAGTGCTC +
Preference number: 4 (lower is better)
Translates to: FGETLLRPPLPRGAVRRPHLYLR*WGCRVL
Trigger: GAGCACTCTGCAGCCCCATCACCTCAGGTAGAGGTG...TGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR TCA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGACCCGCCGACACCCCTTaGACATGTGCATCACCTTCT +
Preference number: 4 (lower is better)
Translates to: LCRVELSDAHSLESPPDRPADTP*TCASPS
Trigger: AGAAGGTGATGCACATGTTCAAGGGGTGTCGGCGGG...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGAGATGGAAGCCAGGATaGGCCAGCAGGTCTTCTGTT +
Preference number: 4 (lower is better)
Translates to: PTSAAWSCQTPTAWKVPLRWKPG*ASRSSV
Trigger: AACAGAAGACCTGCTGGCTCATCCTGGCTTCCATCT...CAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CTCCCCACCCTGCCTCCAAAGAACCAGGGCCCCGGCTCTGCTAACCGCTGTCCCAGATGGAAGCCAGGATaGGCCAGCAGGTCTTCTGTT +
Preference number: 4 (lower is better)
Translates to: LPTLPPKNQGPGSANRCPRWKPG*ASRSSV
Trigger: AACAGAAGACCTGCTGGCTCATCCTGGCTTCCATCT...GGGACAGCGGTTAGCAGAGCCGGGGCCCTGGTTCTTTGGAGGCAGGGTGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCTCTCCTCAGGGCCCTaGCGGAAGGAGGTGGACCGT +
Preference number: 4 (lower is better)
Translates to: KAKVFSMQIGSQVGAVVPLSSGP*RKEVDR
Trigger: ACGGTCCACCTCCTTCCGTCAGGGCCCTGAGGAGAG...GGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAGTGCTGGCTGGACTTaGGAGCCCTGTTTACCAGGG +
Preference number: 4 (lower is better)
Translates to: LCRVELSDAHSLESPPDRSAGWT*EPCLPG
Trigger: CCCTGGTAAACAGGGCTCTCAAGTCCAGCCAGCACT...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp TGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTAGTGCTGGCTGGACTTaGGAGCCCTGTTTACCAGGG +
Preference number: 4 (lower is better)
Translates to: CFAHLCRVELSDAHSLESSAGWT*EPCLPG
Trigger: CCCTGGTAAACAGGGCTCTCAAGTCCAGCCAGCACT...ACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCAGTGCTGGCTGGACTTaGGAGCCCTGTTTACCAGGG +
Preference number: 4 (lower is better)
Translates to: LWRDSASPTSAAWSCQTPSAGWT*EPCLPG
Trigger: CCCTGGTAAACAGGGCTCTCAAGTCCAGCCAGCACT...GGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AGGCAGGCAGAGCTGGAAGCCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTCGGCCATGCCGGTGGTaGAGGTTTTCCTCATGCTGG +
Preference number: 4 (lower is better)
Translates to: RQAELEAAGGCRWKRSALRPCRW*RFSSCW
Trigger: CCAGCATGAGGAAAACCTTCACCACCGGCATGGCCG...AAGAGCTGATCTCTTCCACCTGCACCCACCCGCGGCTTCCAGCTCTGCCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp TCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCTGCTCCTCTGACAGCTaGACTTGGATGAGGGGCCGC +
Preference number: 4 (lower is better)
Translates to: SLERLCFAHLCRVELSDACSSDS*TWMRGR
Trigger: GCGGCCCCTCATCCAAGTTCAGCTGTCAGAGGAGCA...GGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGTCGGATCTGCTCCTCTaGCAGCTGAACTTGGATGAG +
Preference number: 4 (lower is better)
Translates to: PTSAAWSCQTPTAWKVPLSDLLL*QLNLDE
Trigger: CTCATCCAAGTTCAGCTGTCAGAGGAGCAGATCCGA...CAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCTAGCCGGTCACTGCTaGGTCGGAGCTCGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRLAGHC*VGARSS
Trigger: AGAGGAACGAGCTCCGACTCAGCAGTGACCGGCTAG...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp TCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCTCTCGGCTGCCCGAATaGGCCGGGCTTCCATCACTT +
Preference number: 4 (lower is better)
Translates to: SLERLCFAHLCRVELSDASRLPE*AGLPSL
Trigger: AAGTGATGGAAGCCCGGCTCATTCGGGCAGCCGAGA...GGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp TTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCATCTCGGCTGCCCGAATaGGCCGGGCTTCCATCACTT +
Preference number: 4 (lower is better)
Translates to: FGETLLRPPLPRGAVRRPSRLPE*AGLPSL
Trigger: AAGTGATGGAAGCCCGGCTCATTCGGGCAGCCGAGA...TGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp TGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGTCTCGGCTGCCCGAATaGGCCGGGCTTCCATCACTT +
Preference number: 4 (lower is better)
Translates to: CRVELSDAHSLESPPDRKSRLPE*AGLPSL
Trigger: AAGTGATGGAAGCCCGGCTCATTCGGGCAGCCGAGA...CTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp TCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCGGAGCCGCTTCTTGGTaGAGTCCACCTCCCGAACAG +
Preference number: 4 (lower is better)
Translates to: SLERLCFAHLCRVELSDAGAASW*SPPPEQ
Trigger: CTGTTCGGGAGGTGGACTTCACCAAGAAGCGGCTCC...GGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp TGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGGGAGCCGCTTCTTGGTaGAGTCCACCTCCCGAACAG +
Preference number: 4 (lower is better)
Translates to: CRVELSDAHSLESPPDRKGAASW*SPPPEQ
Trigger: CTGTTCGGGAGGTGGACTTCACCAAGAAGCGGCTCC...CTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGTGCTGCAGTGCCCGTTaGCTCTCATCACTATCTGCT +
Preference number: 4 (lower is better)
Translates to: PTSAAWSCQTPTAWKVPLCCSAR*LSSLSA
Trigger: AGCAGATAGTGATGAGAGTCAACGGGCACTGCAGCA...CAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGTTTGGCACTTCTTCTTaGGCTGCTGCAGTGCCCGTT +
Preference number: 4 (lower is better)
Translates to: PTSAAWSCQTPTAWKVPLFGTSS*AAAVPV
Trigger: AACGGGCACTGCAGCAGCTCAAGAAGAAGTGCCAAA...CAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AGGCAGGCAGAGCTGGAAGCCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTCCCGGAGCTGCTTCTTaGCCTTGGCCAGAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: RQAELEAAGGCRWKRSALPGAAS*PWPEKP
Trigger: AGGCTTCTCTGGCCAAGGTCAAGAAGCAGCTCCGGG...AAGAGCTGATCTCTTCCACCTGCACCCACCCGCGGCTTCCAGCTCTGCCTGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCCGGAGCTGCTTCTTaGCCTTGGCCAGAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRPGAAS*PWPEKP
Trigger: AGGCTTCTCTGGCCAAGGTCAAGAAGCAGCTCCGGG...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp TCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCCCGGAGCTGCTTCTTaGCCTTGGCCAGAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: SLERLCFAHLCRVELSDAPGAAS*PWPEKP
Trigger: AGGCTTCTCTGGCCAAGGTCAAGAAGCAGCTCCGGG...GGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp TGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCCCGGAGCTGCTTCTTaGCCTTGGCCAGAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: CRVELSDAHSLESPPDRKPGAAS*PWPEKP
Trigger: AGGCTTCTCTGGCCAAGGTCAAGAAGCAGCTCCGGG...CTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp TCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAACCTCTTCCTGGTCCTTaGCCTTGGCCTCCAAGTCCC +
Preference number: 4 (lower is better)
Translates to: SAAWSCQTPTAWKVPLTEPLPGP*PWPPSP
Trigger: GGGACTTGGAGGCCAAGGTCAAGGACCAGGAAGAGG...TTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGTTAAGTGGTCCAGCATaGTCTGGGCATCTGCCAGCA +
Preference number: 4 (lower is better)
Translates to: PTSAAWSCQTPTAWKVPLLSGPA*SGHLPA
Trigger: TGCTGGCAGATGCCCAGATCATGCTGGACCACTTAA...CAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCTCGCTTCCTGCCTGCTaGCGAGGGACTTGTCCACCA +
Preference number: 4 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRSLPAC*RGTCPP
Trigger: TGGTGGACAAGTCCCTCGTCAGCAGGCAGGAAGCGA...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCGTGTCTCCAGCTCCCTaGTCTTCGCTTCCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRVSPAP*SSLPAC
Trigger: GCAGGCAGGAAGCGAAGATCAGGGAGCTGGAGACAC...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp TCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAATTGACAACCAGGACTTaGCCCCGTCGACCCGGTCCT +
Preference number: 4 (lower is better)
Translates to: SAAWSCQTPTAWKVPLTELTTRT*PRRPGP
Trigger: AGGACCGGGTCGACGGGGTCAAGTCCTGGTTGTCAA...TTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCTTGACAACCAGGACTTaGCCCCGTCGACCCGGTCCT +
Preference number: 4 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRLTTRT*PRRPGP
Trigger: AGGACCGGGTCGACGGGGTCAAGTCCTGGTTGTCAA...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGAGGTCCCTTGTTCTTTaGCAACCAGGACTTGACCCC +
Preference number: 4 (lower is better)
Translates to: PTSAAWSCQTPTAWKVPLRSLVL*QPGLDP
Trigger: GGGGTCAAGTCCTGGTTGTCAAAGAACAAGGGACCT...CAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CTCCCCACCCTGCCTCCAAAGAACCAGGGCCCCGGCTCTGCTAACCGCTGTCCCAGGTCCCTTGTTCTTTaGCAACCAGGACTTGACCCC +
Preference number: 4 (lower is better)
Translates to: LPTLPPKNQGPGSANRCPRSLVL*QPGLDP
Trigger: GGGGTCAAGTCCTGGTTGTCAAAGAACAAGGGACCT...GGGACAGCGGTTAGCAGAGCCGGGGCCCTGGTTCTTTGGAGGCAGGGTGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp GCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCAGTGATGGATGGCTaGACTGTGAGTGTGCCTCAC +
Preference number: 4 (lower is better)
Translates to: ASPTSAAWSCQTPTAWKVPVMDG*TVSVPH
Trigger: GTGAGGCACACTCACAGTTCAGCCATCCATCACTGG...GACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS-3UTR TCA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGCCCGCCGACACCCCTTaGACATGTGCATCACCCGCT +
Preference number: 4 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQPADTP*TCASPA
Trigger: AGCGGGTGATGCACATGTTCAAGGGGTGTCGGCGGG...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000167856.8
CDS-3UTR GCA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGATCAATGTCCGTCAGGTaGAGGTCAGAGCCACTGGCC +
Preference number: 4 (lower is better)
Translates to: LCRVELSDAHSLESPPDRSMSVR*RSEPLA
Trigger: GGCCAGTGGCTCTGACCTGCACCTGACGGACATTGA...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR GCA 90 bp CTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCTCAATGTCCGTCAGGTaGAGGTCAGAGCCACTGGCC +
Preference number: 4 (lower is better)
Translates to: LWRDSASPTSAAWSCQTPSMSVR*RSEPLA
Trigger: GGCCAGTGGCTCTGACCTGCACCTGACGGACATTGA...GGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR GCA 90 bp GCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCACTGGAGCTGGCTGTaGTTAGGTGTCCTGAGTCCA +
Preference number: 4 (lower is better)
Translates to: ASPTSAAWSCQTPTAWKVHWSWL*LGVLSP
Trigger: TGGACTCAGGACACCTAAGCACAGCCAGCTCCAGTG...GACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR GCA 90 bp AGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGCACTGGAGCTGGCTGTaGTTAGGTGTCCTGAGTCCA +
Preference number: 4 (lower is better)
Translates to: RLCFAHLCRVELSDAHSLHWSWL*LGVLSP
Trigger: TGGACTCAGGACACCTAAGCACAGCCAGCTCCAGTG...CAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR GCA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCGATGGGGCTGCAGAGTaGTCTGAGGGGGTTGAGGTC +
Preference number: 4 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRDGAAE*SEGVEV
Trigger: GACCTCAACCCCCTCAGAGCACTCTGCAGCCCCATC...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR GCA 90 bp TTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACGTCCTGGTCGAGGAATaGCTAGCCCAGGATGCTGCA +
Preference number: 4 (lower is better)
Translates to: LERLCFAHLCRVELSDAHVLVEE*LAQDAA
Trigger: TGCAGCATCCTGGGCTAGGCATTCCTCGACCAGGAC...GTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR GCA 90 bp CTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCGTCCTGGTCGAGGAATaGCTAGCCCAGGATGCTGCA +
Preference number: 4 (lower is better)
Translates to: LWRDSASPTSAAWSCQTPVLVEE*LAQDAA
Trigger: TGCAGCATCCTGGGCTAGGCATTCCTCGACCAGGAC...GGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR GCA 90 bp TGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTGTCCTGGTCGAGGAATaGCTAGCCCAGGATGCTGCA +
Preference number: 4 (lower is better)
Translates to: CFAHLCRVELSDAHSLESVLVEE*LAQDAA
Trigger: TGCAGCATCCTGGGCTAGGCATTCCTCGACCAGGAC...ACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR GCA 90 bp GCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCGTCCTGGTCGAGGAATaGCTAGCCCAGGATGCTGCA +
Preference number: 4 (lower is better)
Translates to: AAWSCQTPTAWKVPLTESVLVEE*LAQDAA
Trigger: TGCAGCATCCTGGGCTAGGCATTCCTCGACCAGGAC...GCTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR GCA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCGATCCAGCATGGTTGTaGGCCGCAGTGAGAAGCCAA +
Preference number: 4 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSDPAWL*AAVRSQ
Trigger: TTGGCTTCTCACTGCGGCGCACAACCATGCTGGATC...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR GCA 90 bp GCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGAAGGCCAGGTCCTTGGTaGCTGCCCCTGGCTCAGCAA +
Preference number: 4 (lower is better)
Translates to: ALFGETLLRPPLPRGAVRRPGPW*LPLAQQ
Trigger: TTGCTGAGCCAGGGGCAGGCACCAAGGACCTGGCCT...TCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR GCA 90 bp TTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCAAGCGTAGATGTGGGGTaGCATGTCCTCCCGCCGACA +
Preference number: 4 (lower is better)
Translates to: FGETLLRPPLPRGAVRRPSVDVG*HVLPPT
Trigger: TGTCGGCGGGAGGACATGGCACCCCACATCTACGCT...TGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGAGCGTAGATGTGGGGTaGCATGTCCTCCCGCCGACA +
Preference number: 4 (lower is better)
Translates to: CRVELSDAHSLESPPDRKSVDVG*HVLPPT
Trigger: TGTCGGCGGGAGGACATGGCACCCCACATCTACGCT...CTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCAGCGTAGATGTGGGGTaGCATGTCCTCCCGCCGACA +
Preference number: 4 (lower is better)
Translates to: SLERLCFAHLCRVELSDASVDVG*HVLPPT
Trigger: TGTCGGCGGGAGGACATGGCACCCCACATCTACGCT...GGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCAGCGTAGATGTGGGGTaGCATGTCCTCCCGCCGACA +
Preference number: 4 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRSVDVG*HVLPPT
Trigger: TGTCGGCGGGAGGACATGGCACCCCACATCTACGCT...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCCAACATCGCCCTATATaGAGTCTGGGCTACAGCGTA +
Preference number: 4 (lower is better)
Translates to: RPPLPRGAVRRPQPGKSPQHRPI*SLGYSV
Trigger: TACGCTGTAGCCCAGACTGCATATAGGGCGATGTTG...GGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGGGTGGACAGAGCCTaGCACTTCTCCACTGAGAAC +
Preference number: 4 (lower is better)
Translates to: HLCRVELSDAHSLESPPDRVDRA*HFSTEN
Trigger: GTTCTCAGTGGAGAAGTGGCAGGCTCTGTCCACCCT...GTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCTGCTGTGCAGCCTTCTaGTTCTCCTCAGGCTTGGAC +
Preference number: 4 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSCCAAF*FSSGLD
Trigger: GTCCAAGCCTGAGGAGAAGCAGAAGGCTGCACAGCA...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCTGCTGTGCAGCCTTCTaGTTCTCCTCAGGCTTGGAC +
Preference number: 4 (lower is better)
Translates to: ASPTSAAWSCQTPTAWKVCCAAF*FSSGLD
Trigger: GTCCAAGCCTGAGGAGAAGCAGAAGGCTGCACAGCA...GACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGTGCTGTGCAGCCTTCTaGTTCTCCTCAGGCTTGGAC +
Preference number: 4 (lower is better)
Translates to: RLCFAHLCRVELSDAHSLCCAAF*FSSGLD
Trigger: GTCCAAGCCTGAGGAGAAGCAGAAGGCTGCACAGCA...CAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGAAGGAGGTGGACCGTTaGAGGGTGCCTCCTTTTAGC +
Preference number: 4 (lower is better)
Translates to: RLCFAHLCRVELSDAHSLKEVDR*RVPPFS
Trigger: GCTAAAAGGAGGCACCCTGCAACGGTCCACCTCCTT...CAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCGAGCACTCAGTTTGGTaGCCTCTCCCAGGCCGCTCT +
Preference number: 4 (lower is better)
Translates to: LFGETLLRPPLPRGAVRREHSVW*PLPGRS
Trigger: AGAGCGGCCTGGGAGAGGGCACCAAACTGAGTGCTC...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCACCAGGCACCAGTaGCTCCTCTTCCAGGAGCCA +
Preference number: 4 (lower is better)
Translates to: ALFGETLLRPPLPRGAVRRTRHQ*LLFQEP
Trigger: TGGCTCCTGGAAGAGGAGGCACTGGTGCCTGGTGCG...TCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCTAGAGCACCGTGGCACTaGCCGCCCGGCCCAGAAACA +
Preference number: 4 (lower is better)
Translates to: AMAEGKGDGKQVQHQVLPRAPWH*PPGPET
Trigger: TGTTTCTGGGCCGGGCGGGCAGTGCCACGGTGCTCT...AGGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGAACCTTGGCGGTACATaGGCATCGCATCAAGCAGGC +
Preference number: 4 (lower is better)
Translates to: RLCFAHLCRVELSDAHSLNLGGT*ASHQAG
Trigger: GCCTGCTTGATGCGATGCGCATGTACCGCCAAGGTT...CAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAACCTTGGCGGTACATaGGCATCGCATCAAGCAGGC +
Preference number: 4 (lower is better)
Translates to: HLCRVELSDAHSLESPPDNLGGT*ASHQAG
Trigger: GCCTGCTTGATGCGATGCGCATGTACCGCCAAGGTT...GTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCTCCGTGCCAACGTGCCTaGCCGGAAGAACACCCGGCT +
Preference number: 4 (lower is better)
Translates to: AMAEGKGDGKQVQHQVLPPCQRA*PEEHPA
Trigger: AGCCGGGTGTTCTTCCGGGCAGGCACGTTGGCACGG...AGGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCTGGAACAGGGTCAGGTaGCTGCTGGTTTGCTCGTCT +
Preference number: 4 (lower is better)
Translates to: ASPTSAAWSCQTPTAWKVWNRVR*LLVCSS
Trigger: AGACGAGCAAACCAGCAGGCACCTGACCCTGTTCCA...GACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACTGGAACAGGGTCAGGTaGCTGCTGGTTTGCTCGTCT +
Preference number: 4 (lower is better)
Translates to: HLCRVELSDAHSLESPPDWNRVR*LLVCSS
Trigger: AGACGAGCAAACCAGCAGGCACCTGACCCTGTTCCA...GTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCTGGAACAGGGTCAGGTaGCTGCTGGTTTGCTCGTCT +
Preference number: 4 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSWNRVR*LLVCSS
Trigger: AGACGAGCAAACCAGCAGGCACCTGACCCTGTTCCA...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGTGGAACAGGGTCAGGTaGCTGCTGGTTTGCTCGTCT +
Preference number: 4 (lower is better)
Translates to: RLCFAHLCRVELSDAHSLWNRVR*LLVCSS
Trigger: AGACGAGCAAACCAGCAGGCACCTGACCCTGTTCCA...CAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCTGGAGAAGTGAAGATGGAGGGGAGATTCCCAAGGCATCCCACAGGCCCCAGGTAGCCCCGGCAGGCTaGCTGGAACAGGGTCAGGTG +
Preference number: 4 (lower is better)
Translates to: LWRSEDGGEIPKASHRPQVAPAG*LEQGQV
Trigger: CACCTGACCCTGTTCCAGGCAGCCTGCCGGGGCTAC...CTGGGGCCTGTGGGATGCCTTGGGAATCTCCCCTCCATCTTCACTTCTCCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCGTAGCCCCGGCAGGCTaGCTGGAACAGGGTCAGGTG +
Preference number: 4 (lower is better)
Translates to: KAKVFSMQIGSQVGAVVPVAPAG*LEQGQV
Trigger: CACCTGACCCTGTTCCAGGCAGCCTGCCGGGGCTAC...GGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGCCACCTTCTCAAGCTTaGTGCGCAGCTGCTGGATCT +
Preference number: 4 (lower is better)
Translates to: RLCFAHLCRVELSDAHSLPPSQA*CAAAGS
Trigger: AGATCCAGCAGCTGCGCAGCAAGCTTGAGAAGGTGG...CAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACCCGTTGATCTCGGCTaGCCGAATGAGCCGGGCTTC +
Preference number: 4 (lower is better)
Translates to: ALFGETLLRPPLPRGAVRPVDLG*PNEPGF
Trigger: GAAGCCCGGCTCATTCGGGCAGCCGAGATCAACGGG...TCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACCCCGTTGATCTCGGCTaGCCGAATGAGCCGGGCTTC +
Preference number: 4 (lower is better)
Translates to: LSLERLCFAHLCRVELSDPVDLG*PNEPGF
Trigger: GAAGCCCGGCTCATTCGGGCAGCCGAGATCAACGGG...GTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGCAGGAGGCTGAGATGGAGGTCCACCACCGGCTCCATGGAATGCCAGGCCACCTCTCCAGCTGCCTCCTaGTCTGCTGTTCCACCTCCA +
Preference number: 4 (lower is better)
Translates to: SRRLRWRSTTGSMECQATSPAAS*SAVPPP
Trigger: TGGAGGTGGAACAGCAGAGCAGGAGGCAGCTGGAGA...GGTGGCCTGGCATTCCATGGAGCCGGTGGTGGACCTCCATCTCAGCCTCCTGCT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp ACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACATCTCCAGCTGCCTCCTaGTCTGCTGTTCCACCTCCA +
Preference number: 4 (lower is better)
Translates to: TSAAWSCQTPTAWKVPLTSPAAS*SAVPPP
Trigger: TGGAGGTGGAACAGCAGAGCAGGAGGCAGCTGGAGA...TGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCTCTCCAGCTGCCTCCTaGTCTGCTGTTCCACCTCCA +
Preference number: 4 (lower is better)
Translates to: AAWSCQTPTAWKVPLTESSPAAS*SAVPPP
Trigger: TGGAGGTGGAACAGCAGAGCAGGAGGCAGCTGGAGA...GCTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACAGCCGCCTCTCCAGCTaGCTCCTGCTCTGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: LSLERLCFAHLCRVELSDSRLSS*LLLCCS
Trigger: GGAACAGCAGAGCAGGAGGCAGCTGGAGAGGCGGCT...GTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACTCTCATCACTATCTaGTTGCAGGTCCCCAAGCCG +
Preference number: 4 (lower is better)
Translates to: PTSAAWSCQTPTAWKVPLTLITI*LQVPKP
Trigger: CGGCTTGGGGACCTGCAAGCAGATAGTGATGAGAGT...CAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCTGCAGCTTGGTGTCCTaGAGCTCAGCTGTGAGCCTT +
Preference number: 4 (lower is better)
Translates to: ASPTSAAWSCQTPTAWKVCSLVS*SSAVSL
Trigger: AAGGCTCACAGCTGAGCTGCAGGACACCAAGCTGCA...GACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCTGGAGAAGTGAAGATGGAGGGGAGATTCCCAAGGCATCCCACAGGCCCCAGTGCAGCTTCTCCCGCTaGGTCTCCTCGTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LWRSEDGGEIPKASHRPQCSFSR*VSSWAW
Trigger: CCAGGCCCACGAGGAGACGCAGCGGGAGAAGCTGCA...CTGGGGCCTGTGGGATGCCTTGGGAATCTCCCCTCCATCTTCACTTCTCCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGAAGTGAAGATGGAGGGGAGATTCCCAAGGCATCCCACAGGCCCCAGCTGCAGTGCAGCTTCTCCCGCTaGGTCTCCTCGTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: RSEDGGEIPKASHRPQLQCSFSR*VSSWAW
Trigger: CCAGGCCCACGAGGAGACGCAGCGGGAGAAGCTGCA...CTGCAGCTGGGGCCTGTGGGATGCCTTGGGAATCTCCCCTCCATCTTCACTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCTGGAGTTTCTCCCTCTaGAGCTTCTCCCGCTGCGTC +
Preference number: 4 (lower is better)
Translates to: AAWSCQTPTAWKVPLTESWSFSL*SFSRCV
Trigger: GACGCAGCGGGAGAAGCTGCAGAGGGAGAAACTCCA...GCTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp ACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACATGGAGTTTCTCCCTCTaGAGCTTCTCCCGCTGCGTC +
Preference number: 4 (lower is better)
Translates to: TSAAWSCQTPTAWKVPLTWSFSL*SFSRCV
Trigger: GACGCAGCGGGAGAAGCTGCAGAGGGAGAAACTCCA...TGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCTCCAAGTCCCGGAGCTaGTTCTTGACCTTGGCCAGA +
Preference number: 4 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSSKSRS*FLTLAR
Trigger: TCTGGCCAAGGTCAAGAAGCAGCTCCGGGACTTGGA...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGCCTTTACAGCTGCTaGACAGGTGAATTCCGACTC +
Preference number: 4 (lower is better)
Translates to: RPPLPRGAVRRPQPGKSPCLYSC*TGEFRL
Trigger: GAGTCGGAATTCACCTGTGCAGCAGCTGTAAAGGCA...GGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGCAGGAGGCTGAGATGGAGGTCCACCACCGGCTCCATGGAATGCCAGGCCACCGGCCTGGGCCACAGCTaGCTTGTGCTTCTTCATCAG +
Preference number: 4 (lower is better)
Translates to: SRRLRWRSTTGSMECQATGLGHS*LVLLHQ
Trigger: CTGATGAAGAAGCACAAGGCAGCTGTGGCCCAGGCC...GGTGGCCTGGCATTCCATGGAGCCGGTGGTGGACCTCCATCTCAGCCTCCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACGGCCTGGGCCACAGCTaGCTTGTGCTTCTTCATCAG +
Preference number: 4 (lower is better)
Translates to: LERLCFAHLCRVELSDAHGLGHS*LVLLHQ
Trigger: CTGATGAAGAAGCACAAGGCAGCTGTGGCCCAGGCC...GTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAGGCCTGGGCCACAGCTaGCTTGTGCTTCTTCATCAG +
Preference number: 4 (lower is better)
Translates to: LCRVELSDAHSLESPPDRGLGHS*LVLLHQ
Trigger: CTGATGAAGAAGCACAAGGCAGCTGTGGCCCAGGCC...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACTTGTCCACCATGGACTaGTCCAGGAACTCCACCTGG +
Preference number: 4 (lower is better)
Translates to: HLCRVELSDAHSLESPPDLSTMD*SRNSTW
Trigger: CCAGGTGGAGTTCCTGGAGCAGTCCATGGTGGACAA...GTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGTTGTCCACCATGGACTaGTCCAGGAACTCCACCTGG +
Preference number: 4 (lower is better)
Translates to: RLCFAHLCRVELSDAHSLLSTMD*SRNSTW
Trigger: CCAGGTGGAGTTCCTGGAGCAGTCCATGGTGGACAA...CAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGTCCATCTCCAGTTCATaGTTCTTGCGGCTAGCCTCG +
Preference number: 4 (lower is better)
Translates to: PTSAAWSCQTPTAWKVPLSISSS*FLRLAS
Trigger: CGAGGCTAGCCGCAAGAAGCATGAACTGGAGATGGA...CAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCTGCCCCTCTCTGGGTaGTCCAGCTGTGCGCTCCGG +
Preference number: 4 (lower is better)
Translates to: RKPRCFPCRSAVRWGQWCLPLSG*SSCALR
Trigger: CCGGAGCGCACAGCTGGAGCACCCAGAGAGGGGCAG...GCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS-3UTR GCA 90 bp GGCCTCTGTGTCGCTGTCACTCAGATAGCTGTGGGAGAACCGGGGTCTGGAGATCAGAGCGGCGGATGCTaGTGCCCCTCTCTGGGTGCT +
Preference number: 4 (lower is better)
Translates to: GLCVAVTQIAVGEPGSGDQSGGC*CPSLGA
Trigger: AGCACCCAGAGAGGGGCAGCAGCATCCGCCGCTCTG...ATCTCCAGACCCCGGTTCTCCCACAGCTATCTGAGTGACAGCGACACAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS-3UTR GCA 90 bp CACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACGACCGTCTTGGAGTTTaGCCCGCTTCCTCAACGTCT +
Preference number: 4 (lower is better)
Translates to: HLCRVELSDAHSLESPPDDRLGV*PASSTS
Trigger: AGACGTTGAGGAAGCGGGGCAAACTCCAAGACGGTC...GTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS-3UTR CCA 90 bp TGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCCAGTGAACCGAACTTaGCTGCCCGCTGCAGCACAG +
Preference number: 4 (lower is better)
Translates to: CRVELSDAHSLESPPDRKPVNRT*LPAAAQ
Trigger: CTGTGCTGCAGCGGGCAGCCAAGTTCGGTTCACTGG...CTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CCA 90 bp CGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTCTGAGAGTTCTGCTTaGCCAGTGAACCGAACTTGG +
Preference number: 4 (lower is better)
Translates to: RPPLPRGAVRRPQPGKSPSESSA*PVNRTW
Trigger: CCAAGTTCGGTTCACTGGCCAAGCAGAACTCTCAGA...GGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CCA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGAGCAGGAGGTGGTGGTaGCACCAGAGCGGGAAGACG +
Preference number: 4 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQSRRWW*HQSGKT
Trigger: CGTCTTCCCGCTCTGGTGCCACCACCACCTCCTGCT...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CCA 90 bp CTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGAGAGCAGGAGGTGGTaGTGGCACCAGAGCGGGAAG +
Preference number: 4 (lower is better)
Translates to: LSLERLCFAHLCRVELSDESRRW*WHQSGK
Trigger: CTTCCCGCTCTGGTGCCACCACCACCTCCTGCTCTC...GTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CCA 90 bp CAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCGGAGAGCAGGAGGTaGTGGTGGCACCAGAGCGGG +
Preference number: 4 (lower is better)
Translates to: QKAKVFSMQIGSQVGAVVPESRR*WWHQSG
Trigger: CCCGCTCTGGTGCCACCACCACCTCCTGCTCTCCGG...CACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CCA 90 bp TCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAACACCAGTCGATCTCCTaGTACCAGCCCCAAGGCCAG +
Preference number: 4 (lower is better)
Translates to: SAAWSCQTPTAWKVPLTEHQSIS*YQPQGQ
Trigger: CTGGCCTTGGGGCTGGTACCAGGAGATCGACTGGTG...TTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CCA 90 bp TTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCAAGGATGGCTCCGTCATaGTCCAGCTTCACACGCGCC +
Preference number: 4 (lower is better)
Translates to: FGETLLRPPLPRGAVRRPRMAPS*SSFTRA
Trigger: GGCGCGTGTGAAGCTGGACCATGACGGAGCCATCCT...TGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCATCCACATCCAGGATaGCTCCGTCATGGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: ASPTSAAWSCQTPTAWKVHPHPG*LRHGPA
Trigger: AGCTGGACCATGACGGAGCCATCCTGGATGTGGATG...GACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGCAGGAGGCTGAGATGGAGGTCCACCACCGGCTCCATGGAATGCCAGGCCACCCCACTGAGAACACCTTaGTCCCACTGGTACCCGCGA +
Preference number: 4 (lower is better)
Translates to: SRRLRWRSTTGSMECQATPLRTP*SHWYPR
Trigger: TCGCGGGTACCAGTGGGACCAAGGTGTTCTCAGTGG...GGTGGCCTGGCATTCCATGGAGCCGGTGGTGGACCTCCATCTCAGCCTCCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCATCCAGGGAGAGGATCTaGGAGAAGCGGGTGGCACTG +
Preference number: 4 (lower is better)
Translates to: FGETLLRPPLPRGAVRRPSRERI*EKRVAL
Trigger: CAGTGCCACCCGCTTCTCCCAGATCCTCTCCCTGGA...TGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCTCCAGGGAGAGGATCTaGGAGAAGCGGGTGGCACTG +
Preference number: 4 (lower is better)
Translates to: SLERLCFAHLCRVELSDASRERI*EKRVAL
Trigger: CAGTGCCACCCGCTTCTCCCAGATCCTCTCCCTGGA...GGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGGCCACCTGGCCAGCTTaGTCAAAGTCCAGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: CRVELSDAHSLESPPDRKATWPA*SKSRER
Trigger: CCTCTCCCTGGACTTTGACCAAGCTGGCCAGGTGGC...CTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAGCCACCTGGCCAGCTTaGTCAAAGTCCAGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: SAAWSCQTPTAWKVPLTEATWPA*SKSRER
Trigger: CCTCTCCCTGGACTTTGACCAAGCTGGCCAGGTGGC...TTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCGCCAAGTGGTTCAGGTaGAGCTCTGTCCTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: LWRDSASPTSAAWSCQTPAKWFR*SSVLRV
Trigger: CACCCTCAGGACAGAGCTCCACCTGAACCACTTGGC...GGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCGCCAAGTGGTTCAGGTaGAGCTCTGTCCTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: AAWSCQTPTAWKVPLTESAKWFR*SSVLRV
Trigger: CACCCTCAGGACAGAGCTCCACCTGAACCACTTGGC...GCTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTGCCAAGTGGTTCAGGTaGAGCTCTGTCCTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: CFAHLCRVELSDAHSLESAKWFR*SSVLRV
Trigger: CACCCTCAGGACAGAGCTCCACCTGAACCACTTGGC...ACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGGTTCCTCGGGGGAGATaGCCAGCACCTTCATGGCAG +
Preference number: 4 (lower is better)
Translates to: CRVELSDAHSLESPPDRKVPRGR*PAPSWQ
Trigger: CTGCCATGAAGGTGCTGGCCATCTCCCCCGAGGAAC...CTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACTTCTGGGCCCATTCGTaGCGGGCAAACTGCTTTCGT +
Preference number: 4 (lower is better)
Translates to: HLCRVELSDAHSLESPPDFWAHS*RANCFR
Trigger: ACGAAAGCAGTTTGCCCGCCACGAATGGGCCCAGAA...GTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCAGGTATGCTGCCTTCTaGGCCCATTCGTGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: SLERLCFAHLCRVELSDARYAAF*AHSWRA
Trigger: TGCCCGCCACGAATGGGCCCAGAAGGCAGCATACCT...GGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCAGGTATGCTGCCTTCTaGGCCCATTCGTGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRRYAAF*AHSWRA
Trigger: TGCCCGCCACGAATGGGCCCAGAAGGCAGCATACCT...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACCCAGAGCACTCAGTTTaGTGCCCTCTCCCAGGCCGC +
Preference number: 4 (lower is better)
Translates to: LSLERLCFAHLCRVELSDPEHSV*CPLPGR
Trigger: GCGGCCTGGGAGAGGGCACCAAACTGAGTGCTCTGG...GTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACGAACAGAGTGAGTGCTaGCTGGACTTGAGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: HLCRVELSDAHSLESPPDEQSEC*LDLRAL
Trigger: CAGGGCTCTCAAGTCCAGCCAGCACTCACTCTGTTC...GTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp ACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACACCCCATTCAGGGTTCTaGAAGCCTGGTGTGTCCACG +
Preference number: 4 (lower is better)
Translates to: TSAAWSCQTPTAWKVPLTPHSGF*KPGVST
Trigger: CGTGGACACACCAGGCTTCCAGAACCCTGAATGGGG...TGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCAGGAAGGTGCGCTCGTaGAACAGCCTCTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRRKVRS*NSLCSL
Trigger: CAGGCTGCAGAGGCTGTTCCACGAGCGCACCTTCCT...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGGAAGGTGCGCTCGTaGAACAGCCTCTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: SAAWSCQTPTAWKVPLTERKVRS*NSLCSL
Trigger: CAGGCTGCAGAGGCTGTTCCACGAGCGCACCTTCCT...TTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGTATCTCTCCAACTCCTaGAGGAAGGTGCGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: RLCFAHLCRVELSDAHSLYLSNS*RKVRSW
Trigger: CCACGAGCGCACCTTCCTCCAGGAGTTGGAGAGATA...CAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCGGAGTCATCTGCAACTaGCTCCAAGTCATCAAACGC +
Preference number: 4 (lower is better)
Translates to: RPPLPRGAVRRPQPGKSPGVICN*LQVIKR
Trigger: GCGTTTGATGACTTGGAGCCAGTTGCAGATGACTCC...GGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACCAGGTGGGAAGCCTaGTCCACAGCAGCCACGGAG +
Preference number: 4 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQTRWEA*STAATE
Trigger: CTCCGTGGCTGCTGTGGACCAGGCTTCCCACCTGGT...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGAACCAGGTGGGAAGCCTaGTCCACAGCAGCCACGGAG +
Preference number: 4 (lower is better)
Translates to: ALFGETLLRPPLPRGAVRTRWEA*STAATE
Trigger: CTCCGTGGCTGCTGTGGACCAGGCTTCCCACCTGGT...TCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp ACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAAGTGAGCGAACCAGGTaGGAAGCCTGGTCCACAGCA +
Preference number: 4 (lower is better)
Translates to: TSAAWSCQTPTAWKVPLTSERTR*EAWSTA
Trigger: TGCTGTGGACCAGGCTTCCCACCTGGTTCGCTCACT...TGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAGTGAGCGAACCAGGTaGGAAGCCTGGTCCACAGCA +
Preference number: 4 (lower is better)
Translates to: LCRVELSDAHSLESPPDRSERTR*EAWSTA
Trigger: TGCTGTGGACCAGGCTTCCCACCTGGTTCGCTCACT...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCTTGGTACCGTGGCTGTaGCCCAGGAGAAAGTGCCGA +
Preference number: 4 (lower is better)
Translates to: AAWSCQTPTAWKVPLTESLVPWL*PRRKCR
Trigger: TCGGCACTTTCTCCTGGGCCACAGCCACGGTACCAA...GCTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCTTGGTACCGTGGCTGTaGCCCAGGAGAAAGTGCCGA +
Preference number: 4 (lower is better)
Translates to: LWRDSASPTSAAWSCQTPLVPWL*PRRKCR
Trigger: TCGGCACTTTCTCCTGGGCCACAGCCACGGTACCAA...GGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAACCCAGTTGGTACCGTaGCTGTGGCCCAGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: LCRVELSDAHSLESPPDRTQLVP*LWPRRK
Trigger: CTTTCTCCTGGGCCACAGCCACGGTACCAACTGGGT...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACTGTACTCCACCCAGTTaGTACCGTGGCTGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: LERLCFAHLCRVELSDAHCTPPS*YRGCGP
Trigger: TGGGCCACAGCCACGGTACCAACTGGGTGGAGTACA...GTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTTGTACTCCACCCAGTTaGTACCGTGGCTGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: CFAHLCRVELSDAHSLESCTPPS*YRGCGP
Trigger: TGGGCCACAGCCACGGTACCAACTGGGTGGAGTACA...ACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCCCCACCCTGCCTCCAAAGAACCAGGGCCCCGGCTCTGCTAACCGCTGTCCCTGGCTGGGTTCTGCTTaGTGTAATTCAGCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: LPTLPPKNQGPGSANRCPWLGSA*CNSASQ
Trigger: CTGGCTGGCTGAATTACACCAAGCAGAACCCAGCCA...GGGACAGCGGTTAGCAGAGCCGGGGCCCTGGTTCTTTGGAGGCAGGGTGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp ACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGGGGTGCATTCTGGGTaGCTGGGTTCTGCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: TSAAWSCQTPTAWKVPLTGVHSG*LGSAWC
Trigger: ACACCAAGCAGAACCCAGCCACCCAGAATGCACCCC...TGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAGGGGTGCATTCTGGGTaGCTGGGTTCTGCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: LCRVELSDAHSLESPPDRGVHSG*LGSAWC
Trigger: ACACCAAGCAGAACCCAGCCACCCAGAATGCACCCC...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCAGCCGGGGTGCATTCTaGGTGGCTGGGTTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRSRGAF*VAGFCL
Trigger: CAAGCAGAACCCAGCCACCCAGAATGCACCCCGGCT...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCCTGATGATCTTTTTCTaGGAGTCCTGCAGAAGCCGG +
Preference number: 4 (lower is better)
Translates to: RPPLPRGAVRRPQPGKSPLMIFF*ESCRSR
Trigger: CCGGCTTCTGCAGGACTCCCAGAAAAAGATCATCAG...GGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GAGTACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGAGCCTGAGAGCACCGTaGCACTGCCCGCCCGGCCCA +
Preference number: 4 (lower is better)
Translates to: EYKAMAEGKGDGKQVQHQSLRAP*HCPPGP
Trigger: TGGGCCGGGCGGGCAGTGCCACGGTGCTCTCAGGCT...CTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGTACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCTCCGCGTCCAGCAGCTaGGAGGCGGACTCTCCCGTG +
Preference number: 4 (lower is better)
Translates to: RKPRCFPCRSAVRWGQWCSASSS*EADSPV
Trigger: CACGGGAGAGTCCGCCTCCCAGCTGCTGGACGCGGA...GCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCCTCCAGGTGCAGCTTaGTGTCCTGCAGCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: SLERLCFAHLCRVELSDAPPGAA*CPAAQL
Trigger: CAGCTGAGCTGCAGGACACCAAGCTGCACCTGGAGG...GGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAACCTCCAGGTGCAGCTTaGTGTCCTGCAGCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: SAAWSCQTPTAWKVPLTEPPGAA*CPAAQL
Trigger: CAGCTGAGCTGCAGGACACCAAGCTGCACCTGGAGG...TTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAATGGTTTCGGACCTGCTaGCCCTCCAGGTGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: SAAWSCQTPTAWKVPLTEWFRTC*PSRCSL
Trigger: CAAGCTGCACCTGGAGGGCCAGCAGGTCCGAAACCA...TTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCATGGTTTCGGACCTGCTaGCCCTCCAGGTGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: FGETLLRPPLPRGAVRRPWFRTC*PSRCSL
Trigger: CAAGCTGCACCTGGAGGGCCAGCAGGTCCGAAACCA...TGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGATTCTTCTCCAGCTCGTaGTTTCGGACCTGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: LCRVELSDAHSLESPPDRFFSSS*FRTCWP
Trigger: GGGCCAGCAGGTCCGAAACCACGAGCTGGAGAAGAA...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCGTCTCCTCGTGGGCCTaGGAAAGCTCACTGTCGAAC +
Preference number: 4 (lower is better)
Translates to: AAWSCQTPTAWKVPLTESVSSWA*ESSLSN
Trigger: GTTCGACAGTGAGCTTTCCCAGGCCCACGAGGAGAC...GCTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGATGTCCTTCTCCCGCTaGAGTTTCTCCCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: RLCFAHLCRVELSDAHSLMSFSR*SFSLCS
Trigger: GCTGCAGAGGGAGAAACTCCAGCGGGAGAAGGACAT...CAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGGATTCAAAGTCCCGCTaGTTCACCTGGTCACTGAGC +
Preference number: 4 (lower is better)
Translates to: PTSAAWSCQTPTAWKVPLDSKSR*FTWSLS
Trigger: GCTCAGTGACCAGGTGAACCAGCGGGACTTTGAATC...CAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGCAGGAGGCTGAGATGGAGGTCCACCACCGGCTCCATGGAATGCCAGGCCACCCTGCCAGCAGCGCTTTaGTGCGCTTCAGGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: SRRLRWRSTTGSMECQATLPAAL*CASGLS
Trigger: GGAAAGACCTGAAGCGCACCAAAGCGCTGCTGGCAG...GGTGGCCTGGCATTCCATGGAGCCGGTGGTGGACCTCCATCTCAGCCTCCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCATGTCCCGGGAGGCCTaGGCCACAGCTGCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: SNGRREGGWQTGPAPGTAMSREA*ATAALC
Trigger: GCACAAGGCAGCTGTGGCCCAGGCCTCCCGGGACAT...GGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCGCTCATCTCCTCCTTaGTGTCACGAAGCTGTCGCT +
Preference number: 4 (lower is better)
Translates to: ASPTSAAWSCQTPTAWKVRSSPP*CHEAVA
Trigger: AGCGACAGCTTCGTGACACCAAGGAGGAGATGAGCG...GACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCCCTCGGCTTCCTTCCTaGCAAGCTCGCTCATCTCCT +
Preference number: 4 (lower is better)
Translates to: LWRDSASPTSAAWSCQTPPRLPS*QARSSP
Trigger: AGGAGATGAGCGAGCTTGCCAGGAAGGAAGCCGAGG...GGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGCAGGAGGCTGAGATGGAGGTCCACCACCGGCTCCATGGAATGCCAGGCCACCCCTCGGCTTCCTTCCTaGCAAGCTCGCTCATCTCCT +
Preference number: 4 (lower is better)
Translates to: SRRLRWRSTTGSMECQATPRLPS*QARSSP
Trigger: AGGAGATGAGCGAGCTTGCCAGGAAGGAAGCCGAGG...GGTGGCCTGGCATTCCATGGAGCCGGTGGTGGACCTCCATCTCAGCCTCCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACTCGGCTTGCAGGCTTTaGTTAGCAGCTTCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: HLCRVELSDAHSLESPPDSACRL*LAASRL
Trigger: GAGCCTGGAAGCTGCTAACCAAAGCCTGCAAGCCGA...GTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCCCATCTCATCCTCAATaGCAGCTTGCAAGTCCCCAA +
Preference number: 4 (lower is better)
Translates to: RPPLPRGAVRRPQPGKSPPSHPQ*QLASPQ
Trigger: TTGGGGACTTGCAAGCTGCCATTGAGGATGAGATGG...GGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCG
62% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCGTGGCTTCCAGTGGCTaGTTGGGCTGGAACTCTTCA +
Preference number: 4 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSVASSG*LGWNSS
Trigger: TGAAGAGTTCCAGCCCAACCAGCCACTGGAAGCCAC...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCGTGGCTTCCAGTGGCTaGTTGGGCTGGAACTCTTCA +
Preference number: 4 (lower is better)
Translates to: ASPTSAAWSCQTPTAWKVVASSG*LGWNSS
Trigger: TGAAGAGTTCCAGCCCAACCAGCCACTGGAAGCCAC...GACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCTGGGTCAGGGGCGAGTaGCTTCCAGTGGCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: KPRCFPCRSAVRWGQWCPWVRGE*LPVAGW
Trigger: CCAACCAGCCACTGGAAGCCACTCGCCCCTGACCCA...GGGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGATGGGTCAGGGGCGAGTaGCTTCCAGTGGCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: ALFGETLLRPPLPRGAVRWVRGE*LPVAGW
Trigger: CCAACCAGCCACTGGAAGCCACTCGCCCCTGACCCA...TCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGTGGTCTCTGTCAGCTTaGCCTCTGTGTCGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: RLCFAHLCRVELSDAHSLWSLSA*PLCRCH
Trigger: GTGACAGCGACACAGAGGCCAAGCTGACAGAGACCA...CAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACTGGTCTCTGTCAGCTTaGCCTCTGTGTCGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: HLCRVELSDAHSLESPPDWSLSA*PLCRCH
Trigger: GTGACAGCGACACAGAGGCCAAGCTGACAGAGACCA...GTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CAGATAGCTGTGGGAGAACCGGGGTCTGGAGATGCTGTCCACAGGATCATGCTCCCCCACGGGCCTTCCTaGGCGGCCTTTCAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: QIAVGEPGSGDAVHRIMLPHGPS*AAFQER
Trigger: CCTCTCCTGAAAGGCCGCCCAGGAAGGCCCGTGGGG...GAGCATGATCCTGTGGACAGCATCTCCAGACCCCGGTTCTCCCACAGCTATCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS-3UTR CCA 90 bp TCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCAGCCCAGGTACAGGGTaGGGGTGGTGGGTTGTCACT +
Preference number: 4 (lower is better)
Translates to: SLERLCFAHLCRVELSDASPGTG*GWWVVT
Trigger: AGTGACAACCCACCACCCCCACCCTGTACCTGGGCT...GGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168348.8
CDS-3UTR TCA 90 bp ACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGTCCTGAGTCCAGGATaGTGCTACCCCGATTGCTGT +
Preference number: 4 (lower is better)
Translates to: TSAAWSCQTPTAWKVPLTVLSPG*CYPDCC
Trigger: ACAGCAATCGGGGTAGCATCATCCTGGACTCAGGAC...TGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR TCA 90 bp TTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACGTCCTGAGTCCAGGATaGTGCTACCCCGATTGCTGT +
Preference number: 4 (lower is better)
Translates to: LERLCFAHLCRVELSDAHVLSPG*CYPDCC
Trigger: ACAGCAATCGGGGTAGCATCATCCTGGACTCAGGAC...GTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR TCA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGATGCCTTCTTCACCCTTaGGGTCATCACTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: LCRVELSDAHSLESPPDRCLLHP*GHHWSW
Trigger: CCAGCTCCAGTGATGACCTCAAGGGTGAAGAAGGCA...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR TCA 90 bp CTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGTTCTGCTTGGCCAGTaGACCGAACTTGGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: LSLERLCFAHLCRVELSDVLLGQ*TELGCP
Trigger: CGGGCAGCCAAGTTCGGTTCACTGGCCAAGCAGAAC...GTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR TCA 90 bp TTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCAGGTTGTGCGCCGCAGTaGGAAGCCAAAGTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: FGETLLRPPLPRGAVRRPGCAPQ*EAKVSC
Trigger: ACAGGAGACTTTGGCTTCTCACTGCGGCGCACAACC...TGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR TCA 90 bp ACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGTGCATCACCTTCTCTaGATACACAGCAGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: TSAAWSCQTPTAWKVPLTVHHLL*IHSRSP
Trigger: GGGGCTCCTGCTGTGTATTCAGAGAAGGTGATGCAC...TGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCGTGCATCACCTTCTCTaGATACACAGCAGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: LWRDSASPTSAAWSCQTPVHHLL*IHSRSP
Trigger: GGGGCTCCTGCTGTGTATTCAGAGAAGGTGATGCAC...GGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp GCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCGTGCATCACCTTCTCTaGATACACAGCAGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: AAWSCQTPTAWKVPLTESVHHLL*IHSRSP
Trigger: GGGGCTCCTGCTGTGTATTCAGAGAAGGTGATGCAC...GCTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCCGCCGACACCCCTTaGACATGTGCATCACCTTCT +
Preference number: 4 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRPADTP*TCASPS
Trigger: AGAAGGTGATGCACATGTTCAAGGGGTGTCGGCGGG...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AGCAGGAGGCTGAGATGGAGGTCCACCACCGGCTCCATGGAATGCCAGGCCACCTGGCACTGCCATTCATaGTGGTGGGGCTGTTCCCAA +
Preference number: 4 (lower is better)
Translates to: SRRLRWRSTTGSMECQATWHCHS*WWGCSQ
Trigger: TTGGGAACAGCCCCACCATCATGAATGGCAGTGCCA...GGTGGCCTGGCATTCCATGGAGCCGGTGGTGGACCTCCATCTCAGCCTCCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGGGTGGAGCTCTGTCCTaGGGGTGGCATCCCCACAGG +
Preference number: 4 (lower is better)
Translates to: QKAKVFSMQIGSQVGAVVGGALS*GWHPHR
Trigger: CCTGTGGGGATGCCACCCTCAGGACAGAGCTCCACC...CACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGAGATGGAAGCCAGGATaGGCCAGCAGGTCTTCTGTT +
Preference number: 4 (lower is better)
Translates to: RLCFAHLCRVELSDAHSLRWKPG*ASRSSV
Trigger: AACAGAAGACCTGCTGGCTCATCCTGGCTTCCATCT...CAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCTCTCCTCAGGGCCCTaGCGGAAGGAGGTGGACCGT +
Preference number: 4 (lower is better)
Translates to: RKPRCFPCRSAVRWGQWCLSSGP*RKEVDR
Trigger: ACGGTCCACCTCCTTCCGTCAGGGCCCTGAGGAGAG...GCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCAGTGCTGGCTGGACTTaGGAGCCCTGTTTACCAGGG +
Preference number: 4 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRSAGWT*EPCLPG
Trigger: CCCTGGTAAACAGGGCTCTCAAGTCCAGCCAGCACT...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCATCATGGAACAGAGTaGGTGCTGGCTGGACTTGAG +
Preference number: 4 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSHHGTE*VLAGLE
Trigger: CTCAAGTCCAGCCAGCACTCACTCTGTTCCATGATG...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp GCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCATCATGGAACAGAGTaGGTGCTGGCTGGACTTGAG +
Preference number: 4 (lower is better)
Translates to: ASPTSAAWSCQTPTAWKVHHGTE*VLAGLE
Trigger: CTCAAGTCCAGCCAGCACTCACTCTGTTCCATGATG...GACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCATCGGCATGGGCCAGTaGGCGAACCAGGTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: KAKVFSMQIGSQVGAVVPIGMGQ*ANQVGS
Trigger: GCTTCCCACCTGGTTCGCTCACTGGCCCATGCCGAT...GGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCATCGGCATGGGCCAGTaGGCGAACCAGGTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: SNGRREGGWQTGPAPGTAIGMGQ*ANQVGS
Trigger: GCTTCCCACCTGGTTCGCTCACTGGCCCATGCCGAT...GGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCCGGCCATGCCGGTGGTaGAGGTTTTCCTCATGCTGG +
Preference number: 4 (lower is better)
Translates to: KPRCFPCRSAVRWGQWCPRPCRW*RFSSCW
Trigger: CCAGCATGAGGAAAACCTTCACCACCGGCATGGCCG...GGGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp GCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGGCCATGCCGGTGGTaGAGGTTTTCCTCATGCTGG +
Preference number: 4 (lower is better)
Translates to: ALFGETLLRPPLPRGAVRRPCRW*RFSSCW
Trigger: CCAGCATGAGGAAAACCTTCACCACCGGCATGGCCG...TCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACGGATCTTTCTCTTCTTaGAGTGCTGGCGGGCAAGGT +
Preference number: 4 (lower is better)
Translates to: HLCRVELSDAHSLESPPDGSFSS*SAGGQG
Trigger: ACCTTGCCCGCCAGCACTTCAAGAAGAGAAAGATCC...GTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp GCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCGGATCTTTCTCTTCTTaGAGTGCTGGCGGGCAAGGT +
Preference number: 4 (lower is better)
Translates to: ASPTSAAWSCQTPTAWKVGSFSS*SAGGQG
Trigger: ACCTTGCCCGCCAGCACTTCAAGAAGAGAAAGATCC...GACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGTGCTCCTCTGACAGCTaGACTTGGATGAGGGGCCGC +
Preference number: 4 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQCSSDS*TWMRGR
Trigger: GCGGCCCCTCATCCAAGTTCAGCTGTCAGAGGAGCA...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGTCGGATCTGCTCCTCTaGCAGCTGAACTTGGATGAG +
Preference number: 4 (lower is better)
Translates to: RLCFAHLCRVELSDAHSLSDLLL*QLNLDE
Trigger: CTCATCCAAGTTCAGCTGTCAGAGGAGCAGATCCGA...CAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCCTAGCCGGTCACTGCTaGGTCGGAGCTCGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: KPRCFPCRSAVRWGQWCPLAGHC*VGARSS
Trigger: AGAGGAACGAGCTCCGACTCAGCAGTGACCGGCTAG...GGGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp GCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACTAGCCGGTCACTGCTaGGTCGGAGCTCGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: ALFGETLLRPPLPRGAVRLAGHC*VGARSS
Trigger: AGAGGAACGAGCTCCGACTCAGCAGTGACCGGCTAG...TCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACTCTCGGCTGCCCGAATaGGCCGGGCTTCCATCACTT +
Preference number: 4 (lower is better)
Translates to: LSLERLCFAHLCRVELSDSRLPE*AGLPSL
Trigger: AAGTGATGGAAGCCCGGCTCATTCGGGCAGCCGAGA...GTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp GCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCTGCTGCAGTGCCCGTTaGCTCTCATCACTATCTGCT +
Preference number: 4 (lower is better)
Translates to: ASPTSAAWSCQTPTAWKVCCSAR*LSSLSA
Trigger: AGCAGATAGTGATGAGAGTCAACGGGCACTGCAGCA...GACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACTGCTGCAGTGCCCGTTaGCTCTCATCACTATCTGCT +
Preference number: 4 (lower is better)
Translates to: HLCRVELSDAHSLESPPDCCSAR*LSSLSA
Trigger: AGCAGATAGTGATGAGAGTCAACGGGCACTGCAGCA...GTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCTGCTGCAGTGCCCGTTaGCTCTCATCACTATCTGCT +
Preference number: 4 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSCCSAR*LSSLSA
Trigger: AGCAGATAGTGATGAGAGTCAACGGGCACTGCAGCA...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCTTTGGCACTTCTTCTTaGGCTGCTGCAGTGCCCGTT +
Preference number: 4 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSFGTSS*AAAVPV
Trigger: AACGGGCACTGCAGCAGCTCAAGAAGAAGTGCCAAA...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCTTTGCTGCTTCAAGCTaGAAGCCTCAGCCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSFAASS*KPQPGA
Trigger: TGCTCCTGGCTGAGGCTTTCAGCTTGAAGCAGCAAA...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGTTTGCTGCTTCAAGCTaGAAGCCTCAGCCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: RLCFAHLCRVELSDAHSLFAASS*KPQPGA
Trigger: TGCTCCTGGCTGAGGCTTTCAGCTTGAAGCAGCAAA...CAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACCCCGGAGCTGCTTCTTaGCCTTGGCCAGAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: LSLERLCFAHLCRVELSDPGAAS*PWPEKP
Trigger: AGGCTTCTCTGGCCAAGGTCAAGAAGCAGCTCCGGG...GTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGTTTTAACTTCTTCTaGCATGACTGCCGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: RPPLPRGAVRRPQPGKSPCFNFF*HDCRAS
Trigger: AGAGGCCCGGCAGTCATGTCAGAAGAAGTTAAAACA...GGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGTTAAGTGGTCCAGCATaGTCTGGGCATCTGCCAGCA +
Preference number: 4 (lower is better)
Translates to: RLCFAHLCRVELSDAHSLLSGPA*SGHLPA
Trigger: TGCTGGCAGATGCCCAGATCATGCTGGACCACTTAA...CAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCTTAAGTGGTCCAGCATaGTCTGGGCATCTGCCAGCA +
Preference number: 4 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSLSGPA*SGHLPA
Trigger: TGCTGGCAGATGCCCAGATCATGCTGGACCACTTAA...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGGTGTCTCCAGCTCCCTaGTCTTCGCTTCCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQVSPAP*SSLPAC
Trigger: GCAGGCAGGAAGCGAAGATCAGGGAGCTGGAGACAC...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCTCTCCATGGTTTCTTTaGGCCGACTGGCCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSSPWFL*ADWPGS
Trigger: AGAACCTGGCCAGTCGGCTCAAAGAAACCATGGAGA...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGTCTCCATGGTTTCTTTaGGCCGACTGGCCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: RLCFAHLCRVELSDAHSLSPWFL*ADWPGS
Trigger: AGAACCTGGCCAGTCGGCTCAAAGAAACCATGGAGA...CAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACTTGACAACCAGGACTTaGCCCCGTCGACCCGGTCCT +
Preference number: 4 (lower is better)
Translates to: LSLERLCFAHLCRVELSDLTTRT*PRRPGP
Trigger: AGGACCGGGTCGACGGGGTCAAGTCCTGGTTGTCAA...GTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGAGGTCCCTTGTTCTTTaGCAACCAGGACTTGACCCC +
Preference number: 4 (lower is better)
Translates to: RLCFAHLCRVELSDAHSLRSLVL*QPGLDP
Trigger: GGGGTCAAGTCCTGGTTGTCAAAGAACAAGGGACCT...CAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCGCGGCTCCCAACCCCTaGGAAGATGGAGCTACAATC +
Preference number: 4 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRAAPNP*EDGATI
Trigger: GATTGTAGCTCCATCTTCTCAGGGGTTGGGAGCCGC...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS-3UTR TCA 90 bp GGCCTCTGTGTCGCTGTCACTCAGATAGCTGTGGGAGAACCGGGGTCTGGAGATCGCTGGAGCCCTCAATaGCAGAGGCTGAGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: GLCVAVTQIAVGEPGSGDRWSPQ*QRLRLR
Trigger: CCTCAGCCTCAGCCTCTGTCATTGAGGGCTCCAGCG...ATCTCCAGACCCCGGTTCTCCCACAGCTATCTGAGTGACAGCGACACAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS-3UTR GCA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAAAGCCACGGCGCATaGTCATCTCTTCCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: LCRVELSDAHSLESPPDRKSHGA*SSLPGS
Trigger: GGAGCCTGGAAGAGATGAGCATGCGCCGTGGCTTTT...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR GCA 90 bp TCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCTCAATGTCCGTCAGGTaGAGGTCAGAGCCACTGGCC +
Preference number: 4 (lower is better)
Translates to: SLERLCFAHLCRVELSDASMSVR*RSEPLA
Trigger: GGCCAGTGGCTCTGACCTGCACCTGACGGACATTGA...GGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR GCA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCATGCCTAGCCCAGGATaGTGCATTAGCTGTCCCTCA +
Preference number: 4 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSMPSPG*CISCPS
Trigger: TGAGGGACAGCTAATGCAGCATCCTGGGCTAGGCAT...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR GCA 90 bp GCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCATGCCTAGCCCAGGATaGTGCATTAGCTGTCCCTCA +
Preference number: 4 (lower is better)
Translates to: ASPTSAAWSCQTPTAWKVMPSPG*CISCPS
Trigger: TGAGGGACAGCTAATGCAGCATCCTGGGCTAGGCAT...GACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR GCA 90 bp TTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACGATCCAGCATGGTTGTaGGCCGCAGTGAGAAGCCAA +
Preference number: 4 (lower is better)
Translates to: LERLCFAHLCRVELSDAHDPAWL*AAVRSQ
Trigger: TTGGCTTCTCACTGCGGCGCACAACCATGCTGGATC...GTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR GCA 90 bp CTCCCCACCCTGCCTCCAAAGAACCAGGGCCCCGGCTCTGCTAACCGCTGTCCCACACTGTCCCCAGACTaGCGGATCATCTCCACAATT +
Preference number: 4 (lower is better)
Translates to: LPTLPPKNQGPGSANRCPTLSPD*RIISTI
Trigger: AATTGTGGAGATGATCCGGCAGTCTGGGGACAGTGT...GGGACAGCGGTTAGCAGAGCCGGGGCCCTGGTTCTTTGGAGGCAGGGTGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
CDS-3UTR GCA 90 bp GCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGAAGCGTAGATGTGGGGTaGCATGTCCTCCCGCCGACA +
Preference number: 4 (lower is better)
Translates to: ALFGETLLRPPLPRGAVRSVDVG*HVLPPT
Trigger: TGTCGGCGGGAGGACATGGCACCCCACATCTACGCT...TCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp ACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAAGGGTGGACAGAGCCTaGCACTTCTCCACTGAGAAC +
Preference number: 4 (lower is better)
Translates to: TSAAWSCQTPTAWKVPLTRVDRA*HFSTEN
Trigger: GTTCTCAGTGGAGAAGTGGCAGGCTCTGTCCACCCT...TGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCAGGGTGGACAGAGCCTaGCACTTCTCCACTGAGAAC +
Preference number: 4 (lower is better)
Translates to: LWRDSASPTSAAWSCQTPRVDRA*HFSTEN
Trigger: GTTCTCAGTGGAGAAGTGGCAGGCTCTGTCCACCCT...GGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCTGCTGTGCAGCCTTCTaGTTCTCCTCAGGCTTGGAC +
Preference number: 4 (lower is better)
Translates to: LWRDSASPTSAAWSCQTPCCAAF*FSSGLD
Trigger: GTCCAAGCCTGAGGAGAAGCAGAAGGCTGCACAGCA...GGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACTGGACCGTTGCAGGGTaGCTCCTTTTAGCTGGTGTT +
Preference number: 4 (lower is better)
Translates to: HLCRVELSDAHSLESPPDWTVAG*LLLAGV
Trigger: AACACCAGCTAAAAGGAGGCACCCTGCAACGGTCCA...GTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAAGGAGGTGGACCGTTaGAGGGTGCCTCCTTTTAGC +
Preference number: 4 (lower is better)
Translates to: LERLCFAHLCRVELSDAHKEVDR*RVPPFS
Trigger: GCTAAAAGGAGGCACCCTGCAACGGTCCACCTCCTT...GTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCAAGGAGGTGGACCGTTaGAGGGTGCCTCCTTTTAGC +
Preference number: 4 (lower is better)
Translates to: AAWSCQTPTAWKVPLTESKEVDR*RVPPFS
Trigger: GCTAAAAGGAGGCACCCTGCAACGGTCCACCTCCTT...GCTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGAGCACTCAGTTTGGTaGCCTCTCCCAGGCCGCTCT +
Preference number: 4 (lower is better)
Translates to: LSLERLCFAHLCRVELSDEHSVW*PLPGRS
Trigger: AGAGCGGCCTGGGAGAGGGCACCAAACTGAGTGCTC...GTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCGAGCACTCAGTTTGGTaGCCTCTCCCAGGCCGCTCT +
Preference number: 4 (lower is better)
Translates to: KPRCFPCRSAVRWGQWCPEHSVW*PLPGRS
Trigger: AGAGCGGCCTGGGAGAGGGCACCAAACTGAGTGCTC...GGGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGCAGGAGGCTGAGATGGAGGTCCACCACCGGCTCCATGGAATGCCAGGCCACCAACCTTGGCGGTACATaGGCATCGCATCAAGCAGGC +
Preference number: 4 (lower is better)
Translates to: SRRLRWRSTTGSMECQATNLGGT*ASHQAG
Trigger: GCCTGCTTGATGCGATGCGCATGTACCGCCAAGGTT...GGTGGCCTGGCATTCCATGGAGCCGGTGGTGGACCTCCATCTCAGCCTCCTGCT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp ACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAAACCTTGGCGGTACATaGGCATCGCATCAAGCAGGC +
Preference number: 4 (lower is better)
Translates to: TSAAWSCQTPTAWKVPLTNLGGT*ASHQAG
Trigger: GCCTGCTTGATGCGATGCGCATGTACCGCCAAGGTT...TGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGAGGCCCAGACAGCAGCTaGTCTTTTCCAGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: ALFGETLLRPPLPRGAVRGPDSS*SFPGPG
Trigger: CCCTGGACCTGGAAAAGAGCAGCTGCTGTCTGGGCC...TCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGATGGAACAGGGTCAGGTaGCTGCTGGTTTGCTCGTCT +
Preference number: 4 (lower is better)
Translates to: LCRVELSDAHSLESPPDRWNRVR*LLVCSS
Trigger: AGACGAGCAAACCAGCAGGCACCTGACCCTGTTCCA...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACTGGAACAGGGTCAGGTaGCTGCTGGTTTGCTCGTCT +
Preference number: 4 (lower is better)
Translates to: LERLCFAHLCRVELSDAHWNRVR*LLVCSS
Trigger: AGACGAGCAAACCAGCAGGCACCTGACCCTGTTCCA...GTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGGTAGCCCCGGCAGGCTaGCTGGAACAGGGTCAGGTG +
Preference number: 4 (lower is better)
Translates to: QKAKVFSMQIGSQVGAVVVAPAG*LEQGQV
Trigger: CACCTGACCCTGTTCCAGGCAGCCTGCCGGGGCTAC...CACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCTTGCTGCGCAGCTaGTGGATCTCCTCGTCTTTG +
Preference number: 4 (lower is better)
Translates to: LERLCFAHLCRVELSDAHSLLRS*WISSSL
Trigger: CAAAGACGAGGAGATCCAGCAGCTGCGCAGCAAGCT...GTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp ACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAAGCTTGCTGCGCAGCTaGTGGATCTCCTCGTCTTTG +
Preference number: 4 (lower is better)
Translates to: TSAAWSCQTPTAWKVPLTSLLRS*WISSSL
Trigger: CAAAGACGAGGAGATCCAGCAGCTGCGCAGCAAGCT...TGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTAGCTTGCTGCGCAGCTaGTGGATCTCCTCGTCTTTG +
Preference number: 4 (lower is better)
Translates to: CFAHLCRVELSDAHSLESSLLRS*WISSSL
Trigger: CAAAGACGAGGAGATCCAGCAGCTGCGCAGCAAGCT...ACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCAGCTTGCTGCGCAGCTaGTGGATCTCCTCGTCTTTG +
Preference number: 4 (lower is better)
Translates to: AAWSCQTPTAWKVPLTESSLLRS*WISSSL
Trigger: CAAAGACGAGGAGATCCAGCAGCTGCGCAGCAAGCT...GCTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGACCTTCTCAAGCTTGCTaGGCAGCTGCTGGATCTCCT +
Preference number: 4 (lower is better)
Translates to: LCRVELSDAHSLESPPDRPSQAC*AAAGSP
Trigger: AGGAGATCCAGCAGCTGCGCAGCAAGCTTGAGAAGG...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCACCTTCTCAAGCTTaGTGCGCAGCTGCTGGATCT +
Preference number: 4 (lower is better)
Translates to: CFAHLCRVELSDAHSLESPPSQA*CAAAGS
Trigger: AGATCCAGCAGCTGCGCAGCAAGCTTGAGAAGGTGG...ACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCCCGTTGATCTCGGCTaGCCGAATGAGCCGGGCTTC +
Preference number: 4 (lower is better)
Translates to: KAKVFSMQIGSQVGAVVPPVDLG*PNEPGF
Trigger: GAAGCCCGGCTCATTCGGGCAGCCGAGATCAACGGG...GGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGAAGTGAAGATGGAGGGGAGATTCCCAAGGCATCCCACAGGCCCCAGCTGCAGCCCGTTGATCTCGGCTaGCCGAATGAGCCGGGCTTC +
Preference number: 4 (lower is better)
Translates to: RSEDGGEIPKASHRPQLQPVDLG*PNEPGF
Trigger: GAAGCCCGGCTCATTCGGGCAGCCGAGATCAACGGG...CTGCAGCTGGGGCCTGTGGGATGCCTTGGGAATCTCCCCTCCATCTTCACTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGTCTCCAGCTGCCTCCTaGTCTGCTGTTCCACCTCCA +
Preference number: 4 (lower is better)
Translates to: CRVELSDAHSLESPPDRKSPAAS*SAVPPP
Trigger: TGGAGGTGGAACAGCAGAGCAGGAGGCAGCTGGAGA...CTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCAGCCGCCTCTCCAGCTaGCTCCTGCTCTGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: SNGRREGGWQTGPAPGTASRLSS*LLLCCS
Trigger: GGAACAGCAGAGCAGGAGGCAGCTGGAGAGGCGGCT...GGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACACTCTCATCACTATCTaGTTGCAGGTCCCCAAGCCG +
Preference number: 4 (lower is better)
Translates to: HLCRVELSDAHSLESPPDTLITI*LQVPKP
Trigger: CGGCTTGGGGACCTGCAAGCAGATAGTGATGAGAGT...GTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCACTCTCATCACTATCTaGTTGCAGGTCCCCAAGCCG +
Preference number: 4 (lower is better)
Translates to: ASPTSAAWSCQTPTAWKVTLITI*LQVPKP
Trigger: CGGCTTGGGGACCTGCAAGCAGATAGTGATGAGAGT...GACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACCTTGAGCTGCTGCAGTaGCCGTTGACTCTCATCACT +
Preference number: 4 (lower is better)
Translates to: HLCRVELSDAHSLESPPDLELLQ*PLTLIT
Trigger: AGTGATGAGAGTCAACGGGCACTGCAGCAGCTCAAG...GTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTTGAGCTGCTGCAGTaGCCGTTGACTCTCATCACT +
Preference number: 4 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSLELLQ*PLTLIT
Trigger: AGTGATGAGAGTCAACGGGCACTGCAGCAGCTCAAG...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCTTGAGCTGCTGCAGTaGCCGTTGACTCTCATCACT +
Preference number: 4 (lower is better)
Translates to: ASPTSAAWSCQTPTAWKVLELLQ*PLTLIT
Trigger: AGTGATGAGAGTCAACGGGCACTGCAGCAGCTCAAG...GACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp ACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACATGCAGCTTGGTGTCCTaGAGCTCAGCTGTGAGCCTT +
Preference number: 4 (lower is better)
Translates to: TSAAWSCQTPTAWKVPLTCSLVS*SSAVSL
Trigger: AAGGCTCACAGCTGAGCTGCAGGACACCAAGCTGCA...TGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGATGCAGCTTGGTGTCCTaGAGCTCAGCTGTGAGCCTT +
Preference number: 4 (lower is better)
Translates to: LCRVELSDAHSLESPPDRCSLVS*SSAVSL
Trigger: AAGGCTCACAGCTGAGCTGCAGGACACCAAGCTGCA...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGCAGGAGGCTGAGATGGAGGTCCACCACCGGCTCCATGGAATGCCAGGCCACCCTGTCGAACCTCCTCTaGTTCTTCTCCAGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: SRRLRWRSTTGSMECQATLSNLL*FFSSSW
Trigger: CCACGAGCTGGAGAAGAAGCAGAGGAGGTTCGACAG...GGTGGCCTGGCATTCCATGGAGCCGGTGGTGGACCTCCATCTCAGCCTCCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACCTGTCGAACCTCCTCTaGTTCTTCTCCAGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: LERLCFAHLCRVELSDAHLSNLL*FFSSSW
Trigger: CCACGAGCTGGAGAAGAAGCAGAGGAGGTTCGACAG...GTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCCTGTCGAACCTCCTCTaGTTCTTCTCCAGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: AAWSCQTPTAWKVPLTESLSNLL*FFSSSW
Trigger: CCACGAGCTGGAGAAGAAGCAGAGGAGGTTCGACAG...GCTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCCTGTCGAACCTCCTCTaGTTCTTCTCCAGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: LWRDSASPTSAAWSCQTPLSNLL*FFSSSW
Trigger: CCACGAGCTGGAGAAGAAGCAGAGGAGGTTCGACAG...GGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCATGGAGTTTCTCCCTCTaGAGCTTCTCCCGCTGCGTC +
Preference number: 4 (lower is better)
Translates to: FGETLLRPPLPRGAVRRPWSFSL*SFSRCV
Trigger: GACGCAGCGGGAGAAGCTGCAGAGGGAGAAACTCCA...TGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGCAGGAGGCTGAGATGGAGGTCCACCACCGGCTCCATGGAATGCCAGGCCACCTCCAAGTCCCGGAGCTaGTTCTTGACCTTGGCCAGA +
Preference number: 4 (lower is better)
Translates to: SRRLRWRSTTGSMECQATSKSRS*FLTLAR
Trigger: TCTGGCCAAGGTCAAGAAGCAGCTCCGGGACTTGGA...GGTGGCCTGGCATTCCATGGAGCCGGTGGTGGACCTCCATCTCAGCCTCCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTTCCAAGTCCCGGAGCTaGTTCTTGACCTTGGCCAGA +
Preference number: 4 (lower is better)
Translates to: CFAHLCRVELSDAHSLESSKSRS*FLTLAR
Trigger: TCTGGCCAAGGTCAAGAAGCAGCTCCGGGACTTGGA...ACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACTCCAAGTCCCGGAGCTaGTTCTTGACCTTGGCCAGA +
Preference number: 4 (lower is better)
Translates to: LERLCFAHLCRVELSDAHSKSRS*FLTLAR
Trigger: TCTGGCCAAGGTCAAGAAGCAGCTCCGGGACTTGGA...GTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCTCCAAGTCCCGGAGCTaGTTCTTGACCTTGGCCAGA +
Preference number: 4 (lower is better)
Translates to: AAWSCQTPTAWKVPLTESSKSRS*FLTLAR
Trigger: TCTGGCCAAGGTCAAGAAGCAGCTCCGGGACTTGGA...GCTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGAGACGCAGCTTGGCCTaGTCCAGCATCTGTATACTC +
Preference number: 4 (lower is better)
Translates to: RLCFAHLCRVELSDAHSLRRSLA*SSICIL
Trigger: GAGTATACAGATGCTGGAGCAGGCCAAGCTGCGTCT...CAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCATGATCTGGGCATCTaGCAGCAGCGCTTTGGTGCG +
Preference number: 4 (lower is better)
Translates to: SLERLCFAHLCRVELSDAHDLGI*QQRFGA
Trigger: CGCACCAAAGCGCTGCTGGCAGATGCCCAGATCATG...GGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGTCATCAATCTGCAGGTaGAGGTCTTCCATCTCCACC +
Preference number: 4 (lower is better)
Translates to: PTSAAWSCQTPTAWKVPLSSICR*RSSIST
Trigger: GGTGGAGATGGAAGACCTGCACCTGCAGATTGATGA...CAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCGGCCTGGGCCACAGCTaGCTTGTGCTTCTTCATCAG +
Preference number: 4 (lower is better)
Translates to: SLERLCFAHLCRVELSDAGLGHS*LVLLHQ
Trigger: CTGATGAAGAAGCACAAGGCAGCTGTGGCCCAGGCC...GGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCAGGCCTGGGCCACAGCTaGCTTGTGCTTCTTCATCAG +
Preference number: 4 (lower is better)
Translates to: FGETLLRPPLPRGAVRRPGLGHS*LVLLHQ
Trigger: CTGATGAAGAAGCACAAGGCAGCTGTGGCCCAGGCC...TGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCAACTCCACCTGGCTCTaGAGAGCTTGTAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: ASPTSAAWSCQTPTAWKVNSTWL*RACSFS
Trigger: GGAGAAGCTACAAGCTCTGCAGAGCCAGGTGGAGTT...GACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGAACTCCACCTGGCTCTaGAGAGCTTGTAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: RLCFAHLCRVELSDAHSLNSTWL*RACSFS
Trigger: GGAGAAGCTACAAGCTCTGCAGAGCCAGGTGGAGTT...CAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAACTCCACCTGGCTCTaGAGAGCTTGTAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: HLCRVELSDAHSLESPPDNSTWL*RACSFS
Trigger: GGAGAAGCTACAAGCTCTGCAGAGCCAGGTGGAGTT...GTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACTTGTCCACCATGGACTaGTCCAGGAACTCCACCTGG +
Preference number: 4 (lower is better)
Translates to: LERLCFAHLCRVELSDAHLSTMD*SRNSTW
Trigger: CCAGGTGGAGTTCCTGGAGCAGTCCATGGTGGACAA...GTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp ACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACATTGTCCACCATGGACTaGTCCAGGAACTCCACCTGG +
Preference number: 4 (lower is better)
Translates to: TSAAWSCQTPTAWKVPLTLSTMD*SRNSTW
Trigger: CCAGGTGGAGTTCCTGGAGCAGTCCATGGTGGACAA...TGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCTTGTCCACCATGGACTaGTCCAGGAACTCCACCTGG +
Preference number: 4 (lower is better)
Translates to: LWRDSASPTSAAWSCQTPLSTMD*SRNSTW
Trigger: CCAGGTGGAGTTCCTGGAGCAGTCCATGGTGGACAA...GGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGAGCTTTAGGTCGGCTTaGAGGCTTTGGTTAGCAGCT +
Preference number: 4 (lower is better)
Translates to: PTSAAWSCQTPTAWKVPLSFRSA*RLWLAA
Trigger: AGCTGCTAACCAAAGCCTGCAAGCCGACCTAAAGCT...CAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCCCCACCCTGCCTCCAAAGAACCAGGGCCCCGGCTCTGCTAACCGCTGTCCCTCCTCAATGGCAGCTTaGAAGTCCCCAATGCGTTTG +
Preference number: 4 (lower is better)
Translates to: LPTLPPKNQGPGSANRCPSSMAA*KSPMRL
Trigger: CAAACGCATTGGGGACTTGCAAGCTGCCATTGAGGA...GGGACAGCGGTTAGCAGAGCCGGGGCCCTGGTTCTTTGGAGGCAGGGTGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGTCCTCAATGGCAGCTTaGAAGTCCCCAATGCGTTTG +
Preference number: 4 (lower is better)
Translates to: PTSAAWSCQTPTAWKVPLSSMAA*KSPMRL
Trigger: CAAACGCATTGGGGACTTGCAAGCTGCCATTGAGGA...CAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGGCCATCGTCAGAAGGTaGCTTAGAAGGTCCCTTGTT +
Preference number: 4 (lower is better)
Translates to: PTSAAWSCQTPTAWKVPLAIVRR*LRRSLV
Trigger: AACAAGGGACCTTCTAAGGCACCTTCTGACGATGGC...CAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GATGCTGTCCACAGGATCATGCTCATCATCCGATGGGTCAGGGGCGAGTGGCTTAGCGGCGGATGCTGCTaGCCCTCTCTGGGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: DAVHRIMLIIRWVRGEWLSGGCC*PSLGAP
Trigger: TGGAGCACCCAGAGAGGGGCAGCAGCATCCGCCGCT...AAGCCACTCGCCCCTGACCCATCGGATGATGAGCATGATCCTGTGGACAGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS-3UTR GCA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTCCGTTTGCTCCTATaGTTGCTTCGGCTTTTGCGG +
Preference number: 4 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSLRLLL*LLRLLR
Trigger: CCGCAAAAGCCGAAGCAAGCATAGGAGCAAACGGAG...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS-3UTR CCA 90 bp CTCTGGAGAAGTGAAGATGGAGGGGAGATTCCCAAGGCATCCCACAGGCCCCAGAGCAGGAGGTGGTGGTaGCACCAGAGCGGGAAGACG +
Preference number: 4 (lower is better)
Translates to: LWRSEDGGEIPKASHRPQSRRWW*HQSGKT
Trigger: CGTCTTCCCGCTCTGGTGCCACCACCACCTCCTGCT...CTGGGGCCTGTGGGATGCCTTGGGAATCTCCCCTCCATCTTCACTTCTCCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
CDS-3UTR CCA 90 bp GAGTACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGCCGGAGAGCAGGAGGTaGTGGTGGCACCAGAGCGGG +
Preference number: 4 (lower is better)
Translates to: EYKAMAEGKGDGKQVQHQPESRR*WWHQSG
Trigger: CCCGCTCTGGTGCCACCACCACCTCCTGCTCTCCGG...CTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGTACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
CDS-3UTR CCA 90 bp CTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACCACCAGTCGATCTCCTaGTACCAGCCCCAAGGCCAG +
Preference number: 4 (lower is better)
Translates to: LSLERLCFAHLCRVELSDHQSIS*YQPQGQ
Trigger: CTGGCCTTGGGGCTGGTACCAGGAGATCGACTGGTG...GTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CCA 90 bp TTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACCAGCTCGCTAAGCTCTaGGATGGGCTGTACCTTGAG +
Preference number: 4 (lower is better)
Translates to: LERLCFAHLCRVELSDAHQLAKL*DGLYLE
Trigger: CTCAAGGTACAGCCCATCCCAGAGCTTAGCGAGCTG...GTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CCA 90 bp CTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACAGGATGGCTCCGTCATaGTCCAGCTTCACACGCGCC +
Preference number: 4 (lower is better)
Translates to: LSLERLCFAHLCRVELSDRMAPS*SSFTRA
Trigger: GGCGCGTGTGAAGCTGGACCATGACGGAGCCATCCT...GTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCATCCACATCCAGGATaGCTCCGTCATGGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: CFAHLCRVELSDAHSLESHPHPG*LRHGPA
Trigger: AGCTGGACCATGACGGAGCCATCCTGGATGTGGATG...ACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGTACCCAGAAGGACAATaGACTGGTCCTGACGACTCA +
Preference number: 4 (lower is better)
Translates to: PTSAAWSCQTPTAWKVPLYPEGQ*TGPDDS
Trigger: TGAGTCGTCAGGACCAGTCCATTGTCCTTCTGGGTA...CAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCCACTGAGAACACCTTaGTCCCACTGGTACCCGCGA +
Preference number: 4 (lower is better)
Translates to: CRVELSDAHSLESPPDRKPLRTP*SHWYPR
Trigger: TCGCGGGTACCAGTGGGACCAAGGTGTTCTCAGTGG...CTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACCACTGAGAACACCTTaGTCCCACTGGTACCCGCGA +
Preference number: 4 (lower is better)
Translates to: FGETLLRPPLPRGAVRRPPLRTP*SHWYPR
Trigger: TCGCGGGTACCAGTGGGACCAAGGTGTTCTCAGTGG...TGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGGCAGGCAGAGCTGGAAGCCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTCCACTGAGAACACCTTaGTCCCACTGGTACCCGCGA +
Preference number: 4 (lower is better)
Translates to: RQAELEAAGGCRWKRSALPLRTP*SHWYPR
Trigger: TCGCGGGTACCAGTGGGACCAAGGTGTTCTCAGTGG...AAGAGCTGATCTCTTCCACCTGCACCCACCCGCGGCTTCCAGCTCTGCCTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCTCCAGGGAGAGGATCTaGGAGAAGCGGGTGGCACTG +
Preference number: 4 (lower is better)
Translates to: KPRCFPCRSAVRWGQWCPSRERI*EKRVAL
Trigger: CAGTGCCACCCGCTTCTCCCAGATCCTCTCCCTGGA...GGGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGTCCAGGGAGAGGATCTaGGAGAAGCGGGTGGCACTG +
Preference number: 4 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQSRERI*EKRVAL
Trigger: CAGTGCCACCCGCTTCTCCCAGATCCTCTCCCTGGA...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGAGAGGCCGAAGCCACCTaGCCAGCTTGGTCAAAGTCC +
Preference number: 4 (lower is better)
Translates to: ALFGETLLRPPLPRGAVREAEAT*PAWSKS
Trigger: GGACTTTGACCAAGCTGGCCAGGTGGCTTCGGCCTC...TCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCGCCAAGTGGTTCAGGTaGAGCTCTGTCCTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: SLERLCFAHLCRVELSDAAKWFR*SSVLRV
Trigger: CACCCTCAGGACAGAGCTCCACCTGAACCACTTGGC...GGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACCTTCATGGCAGCCTaGAGCTTACTGAACTGCTGT +
Preference number: 4 (lower is better)
Translates to: PTSAAWSCQTPTAWKVPLTFMAA*SLLNCC
Trigger: ACAGCAGTTCAGTAAGCTCCAGGCTGCCATGAAGGT...CAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGGTTCCTCGGGGGAGATaGCCAGCACCTTCATGGCAG +
Preference number: 4 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQVPRGR*PAPSWQ
Trigger: CTGCCATGAAGGTGCTGGCCATCTCCCCCGAGGAAC...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCTTCTGGGCCCATTCGTaGCGGGCAAACTGCTTTCGT +
Preference number: 4 (lower is better)
Translates to: AAWSCQTPTAWKVPLTESFWAHS*RANCFR
Trigger: ACGAAAGCAGTTTGCCCGCCACGAATGGGCCCAGAA...GCTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACTTCTGGGCCCATTCGTaGCGGGCAAACTGCTTTCGT +
Preference number: 4 (lower is better)
Translates to: LERLCFAHLCRVELSDAHFWAHS*RANCFR
Trigger: ACGAAAGCAGTTTGCCCGCCACGAATGGGCCCAGAA...GTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGCAGGAGGCTGAGATGGAGGTCCACCACCGGCTCCATGGAATGCCAGGCCACCTTCTGGGCCCATTCGTaGCGGGCAAACTGCTTTCGT +
Preference number: 4 (lower is better)
Translates to: SRRLRWRSTTGSMECQATFWAHS*RANCFR
Trigger: ACGAAAGCAGTTTGCCCGCCACGAATGGGCCCAGAA...GGTGGCCTGGCATTCCATGGAGCCGGTGGTGGACCTCCATCTCAGCCTCCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACAGGTATGCTGCCTTCTaGGCCCATTCGTGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: LSLERLCFAHLCRVELSDRYAAF*AHSWRA
Trigger: TGCCCGCCACGAATGGGCCCAGAAGGCAGCATACCT...GTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp ACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAACAGAGTGAGTGCTaGCTGGACTTGAGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: TSAAWSCQTPTAWKVPLTEQSEC*LDLRAL
Trigger: CAGGGCTCTCAAGTCCAGCCAGCACTCACTCTGTTC...TGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTGAACAGAGTGAGTGCTaGCTGGACTTGAGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: CFAHLCRVELSDAHSLESEQSEC*LDLRAL
Trigger: CAGGGCTCTCAAGTCCAGCCAGCACTCACTCTGTTC...ACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCGAACAGAGTGAGTGCTaGCTGGACTTGAGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: AAWSCQTPTAWKVPLTESEQSEC*LDLRAL
Trigger: CAGGGCTCTCAAGTCCAGCCAGCACTCACTCTGTTC...GCTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGGCAGGCAGAGCTGGAAGCCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTCCCCATTCAGGGTTCTaGAAGCCTGGTGTGTCCACG +
Preference number: 4 (lower is better)
Translates to: RQAELEAAGGCRWKRSALPHSGF*KPGVST
Trigger: CGTGGACACACCAGGCTTCCAGAACCCTGAATGGGG...AAGAGCTGATCTCTTCCACCTGCACCCACCCGCGGCTTCCAGCTCTGCCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGAAGGAAGGTGCGCTCGTaGAACAGCCTCTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: ALFGETLLRPPLPRGAVRRKVRS*NSLCSL
Trigger: CAGGCTGCAGAGGCTGTTCCACGAGCGCACCTTCCT...TCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGAGGAAGGTGCGCTCGTaGAACAGCCTCTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQRKVRS*NSLCSL
Trigger: CAGGCTGCAGAGGCTGTTCCACGAGCGCACCTTCCT...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCTTGGTACCGTGGCTGTaGCCCAGGAGAAAGTGCCGA +
Preference number: 4 (lower is better)
Translates to: SLERLCFAHLCRVELSDALVPWL*PRRKCR
Trigger: TCGGCACTTTCTCCTGGGCCACAGCCACGGTACCAA...GGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCTTGGTACCGTGGCTGTaGCCCAGGAGAAAGTGCCGA +
Preference number: 4 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRLVPWL*PRRKCR
Trigger: TCGGCACTTTCTCCTGGGCCACAGCCACGGTACCAA...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAACCCAGTTGGTACCGTaGCTGTGGCCCAGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: SAAWSCQTPTAWKVPLTETQLVP*LWPRRK
Trigger: CTTTCTCCTGGGCCACAGCCACGGTACCAACTGGGT...TTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGTGTACTCCACCCAGTTaGTACCGTGGCTGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: CRVELSDAHSLESPPDRKCTPPS*YRGCGP
Trigger: TGGGCCACAGCCACGGTACCAACTGGGTGGAGTACA...CTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCTGTACTCCACCCAGTTaGTACCGTGGCTGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRCTPPS*YRGCGP
Trigger: TGGGCCACAGCCACGGTACCAACTGGGTGGAGTACA...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGTGGCTGGGTTCTGCTTaGTGTAATTCAGCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: RLCFAHLCRVELSDAHSLWLGSA*CNSASQ
Trigger: CTGGCTGGCTGAATTACACCAAGCAGAACCCAGCCA...CAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCGGGGTGCATTCTGGGTaGCTGGGTTCTGCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRGVHSG*LGSAWC
Trigger: ACACCAAGCAGAACCCAGCCACCCAGAATGCACCCC...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGGCAGGCAGAGCTGGAAGCCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTGGGGTGCATTCTGGGTaGCTGGGTTCTGCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: RQAELEAAGGCRWKRSALGVHSG*LGSAWC
Trigger: ACACCAAGCAGAACCCAGCCACCCAGAATGCACCCC...AAGAGCTGATCTCTTCCACCTGCACCCACCCGCGGCTTCCAGCTCTGCCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACAGCCGGGGTGCATTCTaGGTGGCTGGGTTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: LSLERLCFAHLCRVELSDSRGAF*VAGFCL
Trigger: CAAGCAGAACCCAGCCACCCAGAATGCACCCCGGCT...GTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGAAGCCGGGGTGCATTCTaGGTGGCTGGGTTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: ALFGETLLRPPLPRGAVRSRGAF*VAGFCL
Trigger: CAAGCAGAACCCAGCCACCCAGAATGCACCCCGGCT...TCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCTCTGCACACAGCGAATaGCCAGGTCCTGGATCTTTC +
Preference number: 4 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSSAHSE*PGPGSF
Trigger: GAAAGATCCAGGACCTGGCCATTCGCTGTGTGCAGA...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCTCTGCACACAGCGAATaGCCAGGTCCTGGATCTTTC +
Preference number: 4 (lower is better)
Translates to: ASPTSAAWSCQTPTAWKVSAHSE*PGPGSF
Trigger: GAAAGATCCAGGACCTGGCCATTCGCTGTGTGCAGA...GACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp ACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTCCGCGTCCAGCAGCTaGGAGGCGGACTCTCCCGTG +
Preference number: 4 (lower is better)
Translates to: TKQWQKGRGMANRSSTRYSASSS*EADSPV
Trigger: CACGGGAGAGTCCGCCTCCCAGCTGCTGGACGCGGA...GTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACCCTCCAGGTGCAGCTTaGTGTCCTGCAGCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: LSLERLCFAHLCRVELSDPPGAA*CPAAQL
Trigger: CAGCTGAGCTGCAGGACACCAAGCTGCACCTGGAGG...GTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCCCTCCAGGTGCAGCTTaGTGTCCTGCAGCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: KPRCFPCRSAVRWGQWCPPPGAA*CPAAQL
Trigger: CAGCTGAGCTGCAGGACACCAAGCTGCACCTGGAGG...GGGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCTTCTTCTCCAGCTCGTaGTTTCGGACCTGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRFFSSS*FRTCWP
Trigger: GGGCCAGCAGGTCCGAAACCACGAGCTGGAGAAGAA...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCTTCTTCTCCAGCTCGTaGTTTCGGACCTGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: SLERLCFAHLCRVELSDAFFSSS*FRTCWP
Trigger: GGGCCAGCAGGTCCGAAACCACGAGCTGGAGAAGAA...GGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCGTCTCCTCGTGGGCCTaGGAAAGCTCACTGTCGAAC +
Preference number: 4 (lower is better)
Translates to: SLERLCFAHLCRVELSDAVSSWA*ESSLSN
Trigger: GTTCGACAGTGAGCTTTCCCAGGCCCACGAGGAGAC...GGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGGTCTCCTCGTGGGCCTaGGAAAGCTCACTGTCGAAC +
Preference number: 4 (lower is better)
Translates to: CRVELSDAHSLESPPDRKVSSWA*ESSLSN
Trigger: GTTCGACAGTGAGCTTTCCCAGGCCCACGAGGAGAC...CTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACATGTCCTTCTCCCGCTaGAGTTTCTCCCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LERLCFAHLCRVELSDAHMSFSR*SFSLCS
Trigger: GCTGCAGAGGGAGAAACTCCAGCGGGAGAAGGACAT...GTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCATGTCCTTCTCCCGCTaGAGTTTCTCCCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: AAWSCQTPTAWKVPLTESMSFSR*SFSLCS
Trigger: GCTGCAGAGGGAGAAACTCCAGCGGGAGAAGGACAT...GCTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCTCTCCAGACGCAGCTTaGCCTGCTCCAGCATCTGTA +
Preference number: 4 (lower is better)
Translates to: AAWSCQTPTAWKVPLTESSPDAA*PAPASV
Trigger: TACAGATGCTGGAGCAGGCCAAGCTGCGTCTGGAGA...GCTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACGATTCAAAGTCCCGCTaGTTCACCTGGTCACTGAGC +
Preference number: 4 (lower is better)
Translates to: HLCRVELSDAHSLESPPDDSKSR*FTWSLS
Trigger: GCTCAGTGACCAGGTGAACCAGCGGGACTTTGAATC...GTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCTGCCAGCAGCGCTTTaGTGCGCTTCAGGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRLPAAL*CASGLS
Trigger: GGAAAGACCTGAAGCGCACCAAAGCGCTGCTGGCAG...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCAGCTGGTTCTTCAGCTaGGCAATCTCCCTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: ASPTSAAWSCQTPTAWKVSWFFS*AISLLL
Trigger: GAGCAAGAGGGAGATTGCCCAGCTGAAGAACCAGCT...GACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCAGCTGGTTCTTCAGCTaGGCAATCTCCCTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSSWFFS*AISLLL
Trigger: GAGCAAGAGGGAGATTGCCCAGCTGAAGAACCAGCT...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGTCCGACTCTTCCAGCTaGTTCTTCAGCTGGGCAATC +
Preference number: 4 (lower is better)
Translates to: RLCFAHLCRVELSDAHSLSDSSS*FFSWAI
Trigger: GATTGCCCAGCTGAAGAACCAGCTGGAAGAGTCGGA...CAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGGCGCTGTCTTGGCTTTaGCGATGTCATCAATCTGCA +
Preference number: 4 (lower is better)
Translates to: PTSAAWSCQTPTAWKVPLALSWL*RCHQSA
Trigger: TGCAGATTGATGACATCGCCAAAGCCAAGACAGCGC...CAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCTCCAGCGCTGTCTTaGCTTTGGCGATGTCATCAA +
Preference number: 4 (lower is better)
Translates to: ASPTSAAWSCQTPTAWKVPPALS*LWRCHQ
Trigger: TTGATGACATCGCCAAAGCCAAGACAGCGCTGGAGG...GACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGATGTCCCGGGAGGCCTaGGCCACAGCTGCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: QKAKVFSMQIGSQVGAVVMSREA*ATAALC
Trigger: GCACAAGGCAGCTGTGGCCCAGGCCTCCCGGGACAT...CACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCATGTCCCGGGAGGCCTaGGCCACAGCTGCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: RKPRCFPCRSAVRWGQWCMSREA*ATAALC
Trigger: GCACAAGGCAGCTGTGGCCCAGGCCTCCCGGGACAT...GCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCTCCAGGAACTCCACCTaGCTCTGCAGAGCTTGTAGC +
Preference number: 4 (lower is better)
Translates to: AAWSCQTPTAWKVPLTESSRNST*LCRACS
Trigger: GCTACAAGCTCTGCAGAGCCAGGTGGAGTTCCTGGA...GCTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp ACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACACGCTCATCTCCTCCTTaGTGTCACGAAGCTGTCGCT +
Preference number: 4 (lower is better)
Translates to: TSAAWSCQTPTAWKVPLTRSSPP*CHEAVA
Trigger: AGCGACAGCTTCGTGACACCAAGGAGGAGATGAGCG...TGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACTCGGCTTGCAGGCTTTaGTTAGCAGCTTCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: LERLCFAHLCRVELSDAHSACRL*LAASRL
Trigger: GAGCCTGGAAGCTGCTAACCAAAGCCTGCAAGCCGA...GTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp ACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACATCGGCTTGCAGGCTTTaGTTAGCAGCTTCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: TSAAWSCQTPTAWKVPLTSACRL*LAASRL
Trigger: GAGCCTGGAAGCTGCTAACCAAAGCCTGCAAGCCGA...TGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCAGTGGCTGGTTGGGCTaGAACTCTTCAAGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSSGWLG*NSSSCH
Trigger: ATGGCAGCTTGAAGAGTTCCAGCCCAACCAGCCACT...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTGTGGCTTCCAGTGGCTaGTTGGGCTGGAACTCTTCA +
Preference number: 4 (lower is better)
Translates to: CFAHLCRVELSDAHSLESVASSG*LGWNSS
Trigger: TGAAGAGTTCCAGCCCAACCAGCCACTGGAAGCCAC...ACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCGTGGCTTCCAGTGGCTaGTTGGGCTGGAACTCTTCA +
Preference number: 4 (lower is better)
Translates to: AAWSCQTPTAWKVPLTESVASSG*LGWNSS
Trigger: TGAAGAGTTCCAGCCCAACCAGCCACTGGAAGCCAC...GCTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCTGGGTCAGGGGCGAGTaGCTTCCAGTGGCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: SNGRREGGWQTGPAPGTAWVRGE*LPVAGW
Trigger: CCAACCAGCCACTGGAAGCCACTCGCCCCTGACCCA...GGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCTGGGTCAGGGGCGAGTaGCTTCCAGTGGCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: KAKVFSMQIGSQVGAVVPWVRGE*LPVAGW
Trigger: CCAACCAGCCACTGGAAGCCACTCGCCCCTGACCCA...GGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
3UTR CAA 72 bp GAGCATGGCGTTCAGAGGCAAGAGCGGAAGCTCTCTTaGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTG +
Preference number: 4 (lower is better)
Translates to: EHGVQRQERKLS*ERLCFAHLCRV
Trigger: CACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCTTCCGCTCTTGCCTCTGAACGCCATGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCGTCCTGAGTCCAGGATaGTGCTACCCCGATTGCTGT +
Preference number: 4 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRVLSPG*CYPDCC
Trigger: ACAGCAATCGGGGTAGCATCATCCTGGACTCAGGAC...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR TCA 90 bp AGGCAGGCAGAGCTGGAAGCCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTTGCCTTCTTCACCCTTaGGGTCATCACTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: RQAELEAAGGCRWKRSALCLLHP*GHHWSW
Trigger: CCAGCTCCAGTGATGACCTCAAGGGTGAAGAAGGCA...AAGAGCTGATCTCTTCCACCTGCACCCACCCGCGGCTTCCAGCTCTGCCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
CDS-3UTR TCA 90 bp TCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAATGCCTTCTTCACCCTTaGGGTCATCACTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: SAAWSCQTPTAWKVPLTECLLHP*GHHWSW
Trigger: CCAGCTCCAGTGATGACCTCAAGGGTGAAGAAGGCA...TTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR TCA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGGGTTGTGCGCCGCAGTaGGAAGCCAAAGTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQGCAPQ*EAKVSC
Trigger: ACAGGAGACTTTGGCTTCTCACTGCGGCGCACAACC...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR TCA 90 bp TGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGGTGCATCACCTTCTCTaGATACACAGCAGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: CRVELSDAHSLESPPDRKVHHLL*IHSRSP
Trigger: GGGGCTCCTGCTGTGTATTCAGAGAAGGTGATGCAC...CTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACCCCGCCGACACCCCTTaGACATGTGCATCACCTTCT +
Preference number: 4 (lower is better)
Translates to: LSLERLCFAHLCRVELSDPADTP*TCASPS
Trigger: AGAAGGTGATGCACATGTTCAAGGGGTGTCGGCGGG...GTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCCCCGCCGACACCCCTTaGACATGTGCATCACCTTCT +
Preference number: 4 (lower is better)
Translates to: KPRCFPCRSAVRWGQWCPPADTP*TCASPS
Trigger: AGAAGGTGATGCACATGTTCAAGGGGTGTCGGCGGG...GGGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTT
60% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCTACTGCACCAGATGCTaGAAGCTGGTAGTCTTGCCA +
Preference number: 4 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSYCTRC*KLVVLP
Trigger: TGGCAAGACTACCAGCTTTCAGCATCTGGTGCAGTA...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp TCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAATGGCACTGCCATTCATaGTGGTGGGGCTGTTCCCAA +
Preference number: 4 (lower is better)
Translates to: SAAWSCQTPTAWKVPLTEWHCHS*WWGCSQ
Trigger: TTGGGAACAGCCCCACCATCATGAATGGCAGTGCCA...TTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp TGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGTGGCACTGCCATTCATaGTGGTGGGGCTGTTCCCAA +
Preference number: 4 (lower is better)
Translates to: CRVELSDAHSLESPPDRKWHCHS*WWGCSQ
Trigger: TTGGGAACAGCCCCACCATCATGAATGGCAGTGCCA...CTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp TTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCATGGCACTGCCATTCATaGTGGTGGGGCTGTTCCCAA +
Preference number: 4 (lower is better)
Translates to: FGETLLRPPLPRGAVRRPWHCHS*WWGCSQ
Trigger: TTGGGAACAGCCCCACCATCATGAATGGCAGTGCCA...TGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp ACAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGGTGGAGCTCTGTCCTaGGGGTGGCATCCCCACAGG +
Preference number: 4 (lower is better)
Translates to: TESQGVFHADRQSGGGSGGGALS*GWHPHR
Trigger: CCTGTGGGGATGCCACCCTCAGGACAGAGCTCCACC...ACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCAGATGGAAGCCAGGATaGGCCAGCAGGTCTTCTGTT +
Preference number: 4 (lower is better)
Translates to: LWRDSASPTSAAWSCQTPRWKPG*ASRSSV
Trigger: AACAGAAGACCTGCTGGCTCATCCTGGCTTCCATCT...GGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp GCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCAGATGGAAGCCAGGATaGGCCAGCAGGTCTTCTGTT +
Preference number: 4 (lower is better)
Translates to: AAWSCQTPTAWKVPLTESRWKPG*ASRSSV
Trigger: AACAGAAGACCTGCTGGCTCATCCTGGCTTCCATCT...GCTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp TTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGATGGAAGCCAGGATaGGCCAGCAGGTCTTCTGTT +
Preference number: 4 (lower is better)
Translates to: LERLCFAHLCRVELSDAHRWKPG*ASRSSV
Trigger: AACAGAAGACCTGCTGGCTCATCCTGGCTTCCATCT...GTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp TTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACCATCATGGAACAGAGTaGGTGCTGGCTGGACTTGAG +
Preference number: 4 (lower is better)
Translates to: LERLCFAHLCRVELSDAHHHGTE*VLAGLE
Trigger: CTCAAGTCCAGCCAGCACTCACTCTGTTCCATGATG...GTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGATCGGCATGGGCCAGTaGGCGAACCAGGTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: QKAKVFSMQIGSQVGAVVIGMGQ*ANQVGS
Trigger: GCTTCCCACCTGGTTCGCTCACTGGCCCATGCCGAT...CACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp TTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACGGATCTTTCTCTTCTTaGAGTGCTGGCGGGCAAGGT +
Preference number: 4 (lower is better)
Translates to: LERLCFAHLCRVELSDAHGSFSS*SAGGQG
Trigger: ACCTTGCCCGCCAGCACTTCAAGAAGAGAAAGATCC...GTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp GCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCGGATCTTTCTCTTCTTaGAGTGCTGGCGGGCAAGGT +
Preference number: 4 (lower is better)
Translates to: AAWSCQTPTAWKVPLTESGSFSS*SAGGQG
Trigger: ACCTTGCCCGCCAGCACTTCAAGAAGAGAAAGATCC...GCTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCTGCTCCTCTGACAGCTaGACTTGGATGAGGGGCCGC +
Preference number: 4 (lower is better)
Translates to: KAKVFSMQIGSQVGAVVPCSSDS*TWMRGR
Trigger: GCGGCCCCTCATCCAAGTTCAGCTGTCAGAGGAGCA...GGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCTCGGATCTGCTCCTCTaGCAGCTGAACTTGGATGAG +
Preference number: 4 (lower is better)
Translates to: LWRDSASPTSAAWSCQTPSDLLL*QLNLDE
Trigger: CTCATCCAAGTTCAGCTGTCAGAGGAGCAGATCCGA...GGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp TGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTTCGGATCTGCTCCTCTaGCAGCTGAACTTGGATGAG +
Preference number: 4 (lower is better)
Translates to: CFAHLCRVELSDAHSLESSDLLL*QLNLDE
Trigger: CTCATCCAAGTTCAGCTGTCAGAGGAGCAGATCCGA...ACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp GCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCTCTAGCCGGTCACTGCTaGGTCGGAGCTCGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: AMAEGKGDGKQVQHQVLPLAGHC*VGARSS
Trigger: AGAGGAACGAGCTCCGACTCAGCAGTGACCGGCTAG...AGGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCTAGCCGGTCACTGCTaGGTCGGAGCTCGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: KAKVFSMQIGSQVGAVVPLAGHC*VGARSS
Trigger: AGAGGAACGAGCTCCGACTCAGCAGTGACCGGCTAG...GGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp TTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACTGCTGCAGTGCCCGTTaGCTCTCATCACTATCTGCT +
Preference number: 4 (lower is better)
Translates to: LERLCFAHLCRVELSDAHCCSAR*LSSLSA
Trigger: AGCAGATAGTGATGAGAGTCAACGGGCACTGCAGCA...GTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp GCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCTTTGCTGCTTCAAGCTaGAAGCCTCAGCCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: AAWSCQTPTAWKVPLTESFAASS*KPQPGA
Trigger: TGCTCCTGGCTGAGGCTTTCAGCTTGAAGCAGCAAA...GCTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp ACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACATTTGCTGCTTCAAGCTaGAAGCCTCAGCCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: TSAAWSCQTPTAWKVPLTFAASS*KPQPGA
Trigger: TGCTCCTGGCTGAGGCTTTCAGCTTGAAGCAGCAAA...TGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp GCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCTCCCGGAGCTGCTTCTTaGCCTTGGCCAGAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: AMAEGKGDGKQVQHQVLPPGAAS*PWPEKP
Trigger: AGGCTTCTCTGGCCAAGGTCAAGAAGCAGCTCCGGG...AGGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AGAAGTGAAGATGGAGGGGAGATTCCCAAGGCATCCCACAGGCCCCAGCTGCAGTCGCTTCCTGCCTGCTaGCGAGGGACTTGTCCACCA +
Preference number: 4 (lower is better)
Translates to: RSEDGGEIPKASHRPQLQSLPAC*RGTCPP
Trigger: TGGTGGACAAGTCCCTCGTCAGCAGGCAGGAAGCGA...CTGCAGCTGGGGCCTGTGGGATGCCTTGGGAATCTCCCCTCCATCTTCACTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp GCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCTTCGCTTCCTGCCTGCTaGCGAGGGACTTGTCCACCA +
Preference number: 4 (lower is better)
Translates to: AMAEGKGDGKQVQHQVLPSLPAC*RGTCPP
Trigger: TGGTGGACAAGTCCCTCGTCAGCAGGCAGGAAGCGA...AGGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGATCTCCATGGTTTCTTTaGGCCGACTGGCCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: LCRVELSDAHSLESPPDRSPWFL*ADWPGS
Trigger: AGAACCTGGCCAGTCGGCTCAAAGAAACCATGGAGA...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AGCAGGAGGCTGAGATGGAGGTCCACCACCGGCTCCATGGAATGCCAGGCCACCTCTCCATGGTTTCTTTaGGCCGACTGGCCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: SRRLRWRSTTGSMECQATSPWFL*ADWPGS
Trigger: AGAACCTGGCCAGTCGGCTCAAAGAAACCATGGAGA...GGTGGCCTGGCATTCCATGGAGCCGGTGGTGGACCTCCATCTCAGCCTCCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CTCTGGAGAAGTGAAGATGGAGGGGAGATTCCCAAGGCATCCCACAGGCCCCAGTTGACAACCAGGACTTaGCCCCGTCGACCCGGTCCT +
Preference number: 4 (lower is better)
Translates to: LWRSEDGGEIPKASHRPQLTTRT*PRRPGP
Trigger: AGGACCGGGTCGACGGGGTCAAGTCCTGGTTGTCAA...CTGGGGCCTGTGGGATGCCTTGGGAATCTCCCCTCCATCTTCACTTCTCCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp GCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCTTTGACAACCAGGACTTaGCCCCGTCGACCCGGTCCT +
Preference number: 4 (lower is better)
Translates to: AMAEGKGDGKQVQHQVLPLTTRT*PRRPGP
Trigger: AGGACCGGGTCGACGGGGTCAAGTCCTGGTTGTCAA...AGGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AGCAGGAGGCTGAGATGGAGGTCCACCACCGGCTCCATGGAATGCCAGGCCACCAGGTCCCTTGTTCTTTaGCAACCAGGACTTGACCCC +
Preference number: 4 (lower is better)
Translates to: SRRLRWRSTTGSMECQATRSLVL*QPGLDP
Trigger: GGGGTCAAGTCCTGGTTGTCAAAGAACAAGGGACCT...GGTGGCCTGGCATTCCATGGAGCCGGTGGTGGACCTCCATCTCAGCCTCCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000135375.4
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp GATGCTGTCCACAGGATCATGCTCATCATCCGATGGGTCAGGGGCGAGTGGCTTGGAGCGGTCAAAGTCTaGGCCCCAGCGCTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: DAVHRIMLIIRWVRGEWLGAVKV*APALLQ
Trigger: CTGGAGAAGCGCTGGGGCTCAGACTTTGACCGCTCC...AAGCCACTCGCCCCTGACCCATCGGATGATGAGCATGATCCTGTGGACAGCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS-3UTR TCA 90 bp ACAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGGGCTGGTGGCAGGCTaGGGACTCCTAGGTGGAGCA +
Preference number: 4 (lower is better)
Translates to: TESQGVFHADRQSGGGSGGLVAG*GLLGGA
Trigger: TGCTCCACCTAGGAGTCCTCAGCCTGCCACCAGCCC...ACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000167856.8
CDS-3UTR GCA 90 bp TCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCAAAAGCCACGGCGCATaGTCATCTCTTCCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: SLERLCFAHLCRVELSDAKSHGA*SSLPGS
Trigger: GGAGCCTGGAAGAGATGAGCATGCGCCGTGGCTTTT...GGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR GCA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCAAAAGCCACGGCGCATaGTCATCTCTTCCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRKSHGA*SSLPGS
Trigger: GGAGCCTGGAAGAGATGAGCATGCGCCGTGGCTTTT...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR GCA 90 bp CTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACTCAATGTCCGTCAGGTaGAGGTCAGAGCCACTGGCC +
Preference number: 4 (lower is better)
Translates to: LSLERLCFAHLCRVELSDSMSVR*RSEPLA
Trigger: GGCCAGTGGCTCTGACCTGCACCTGACGGACATTGA...GTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR GCA 90 bp TTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACACTGGAGCTGGCTGTaGTTAGGTGTCCTGAGTCCA +
Preference number: 4 (lower is better)
Translates to: FGETLLRPPLPRGAVRRPHWSWL*LGVLSP
Trigger: TGGACTCAGGACACCTAAGCACAGCCAGCTCCAGTG...TGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR GCA 90 bp AGAAGTGAAGATGGAGGGGAGATTCCCAAGGCATCCCACAGGCCCCAGCTGCAGGATGGGGCTGCAGAGTaGTCTGAGGGGGTTGAGGTC +
Preference number: 4 (lower is better)
Translates to: RSEDGGEIPKASHRPQLQDGAAE*SEGVEV
Trigger: GACCTCAACCCCCTCAGAGCACTCTGCAGCCCCATC...CTGCAGCTGGGGCCTGTGGGATGCCTTGGGAATCTCCCCTCCATCTTCACTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
CDS-3UTR GCA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAATGCCTAGCCCAGGATaGTGCATTAGCTGTCCCTCA +
Preference number: 4 (lower is better)
Translates to: LCRVELSDAHSLESPPDRMPSPG*CISCPS
Trigger: TGAGGGACAGCTAATGCAGCATCCTGGGCTAGGCAT...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR GCA 90 bp AGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGACACTGTCCCCAGACTaGCGGATCATCTCCACAATT +
Preference number: 4 (lower is better)
Translates to: RLCFAHLCRVELSDAHSLTLSPD*RIISTI
Trigger: AATTGTGGAGATGATCCGGCAGTCTGGGGACAGTGT...CAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR GCA 90 bp CACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACCAACATCGCCCTATATaGAGTCTGGGCTACAGCGTA +
Preference number: 4 (lower is better)
Translates to: HLCRVELSDAHSLESPPDQHRPI*SLGYSV
Trigger: TACGCTGTAGCCCAGACTGCATATAGGGCGATGTTG...GTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCAAGGGTGGACAGAGCCTaGCACTTCTCCACTGAGAAC +
Preference number: 4 (lower is better)
Translates to: FGETLLRPPLPRGAVRRPRVDRA*HFSTEN
Trigger: GTTCTCAGTGGAGAAGTGGCAGGCTCTGTCCACCCT...TGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCAAACACATTGTTCTCTaGCAAGTGGTTCAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: RPPLPRGAVRRPQPGKSPKHIVL*QVVQVE
Trigger: CTCCACCTGAACCACTTGGCAGAGAACAATGTGTTT...GGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGCTTACTGAACTGCTGTaGAGCCTTCTGCTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: RLCFAHLCRVELSDAHSLLTELL*SLLLLL
Trigger: GAGGAGAAGCAGAAGGCTGCACAGCAGTTCAGTAAG...CAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTTACTGAACTGCTGTaGAGCCTTCTGCTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSLTELL*SLLLLL
Trigger: GAGGAGAAGCAGAAGGCTGCACAGCAGTTCAGTAAG...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGATGGACCGTTGCAGGGTaGCTCCTTTTAGCTGGTGTT +
Preference number: 4 (lower is better)
Translates to: LCRVELSDAHSLESPPDRWTVAG*LLLAGV
Trigger: AACACCAGCTAAAAGGAGGCACCCTGCAACGGTCCA...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGGCAGGCAGAGCTGGAAGCCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTAAGGAGGTGGACCGTTaGAGGGTGCCTCCTTTTAGC +
Preference number: 4 (lower is better)
Translates to: RQAELEAAGGCRWKRSALKEVDR*RVPPFS
Trigger: GCTAAAAGGAGGCACCCTGCAACGGTCCACCTCCTT...AAGAGCTGATCTCTTCCACCTGCACCCACCCGCGGCTTCCAGCTCTGCCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCAAAGGAGGTGGACCGTTaGAGGGTGCCTCCTTTTAGC +
Preference number: 4 (lower is better)
Translates to: FGETLLRPPLPRGAVRRPKEVDR*RVPPFS
Trigger: GCTAAAAGGAGGCACCCTGCAACGGTCCACCTCCTT...TGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAAGGAGGTGGACCGTTaGAGGGTGCCTCCTTTTAGC +
Preference number: 4 (lower is better)
Translates to: SAAWSCQTPTAWKVPLTEKEVDR*RVPPFS
Trigger: GCTAAAAGGAGGCACCCTGCAACGGTCCACCTCCTT...TTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCTGGAGAAGTGAAGATGGAGGGGAGATTCCCAAGGCATCCCACAGGCCCCAGGAGCACTCAGTTTGGTaGCCTCTCCCAGGCCGCTCT +
Preference number: 4 (lower is better)
Translates to: LWRSEDGGEIPKASHRPQEHSVW*PLPGRS
Trigger: AGAGCGGCCTGGGAGAGGGCACCAAACTGAGTGCTC...CTGGGGCCTGTGGGATGCCTTGGGAATCTCCCCTCCATCTTCACTTCTCCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCGCACCAGGCACCAGTaGCTCCTCTTCCAGGAGCCA +
Preference number: 4 (lower is better)
Translates to: RKPRCFPCRSAVRWGQWCRTRHQ*LLFQEP
Trigger: TGGCTCCTGGAAGAGGAGGCACTGGTGCCTGGTGCG...GCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCGCACCAGGCACCAGTaGCTCCTCTTCCAGGAGCCA +
Preference number: 4 (lower is better)
Translates to: QKAKVFSMQIGSQVGAVVRTRHQ*LLFQEP
Trigger: TGGCTCCTGGAAGAGGAGGCACTGGTGCCTGGTGCG...CACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp ACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACAGAGCACCGTGGCACTaGCCGCCCGGCCCAGAAACA +
Preference number: 4 (lower is better)
Translates to: TKQWQKGRGMANRSSTRYRAPWH*PPGPET
Trigger: TGTTTCTGGGCCGGGCGGGCAGTGCCACGGTGCTCT...GTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCCCCACCCTGCCTCCAAAGAACCAGGGCCCCGGCTCTGCTAACCGCTGTCCCACAGGAAGGAAGCAGTaGACGAAATGCATCTTGGAC +
Preference number: 4 (lower is better)
Translates to: LPTLPPKNQGPGSANRCPTGRKQ*TKCILD
Trigger: GTCCAAGATGCATTTCGTGCACTGCTTCCTTCCTGT...GGGACAGCGGTTAGCAGAGCCGGGGCCCTGGTTCTTTGGAGGCAGGGTGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCAACCTTGGCGGTACATaGGCATCGCATCAAGCAGGC +
Preference number: 4 (lower is better)
Translates to: SLERLCFAHLCRVELSDANLGGT*ASHQAG
Trigger: GCCTGCTTGATGCGATGCGCATGTACCGCCAAGGTT...GGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGAACCTTGGCGGTACATaGGCATCGCATCAAGCAGGC +
Preference number: 4 (lower is better)
Translates to: CRVELSDAHSLESPPDRKNLGGT*ASHQAG
Trigger: GCCTGCTTGATGCGATGCGCATGTACCGCCAAGGTT...CTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGAAGTGAAGATGGAGGGGAGATTCCCAAGGCATCCCACAGGCCCCAGCTGCAGGGCCCAGACAGCAGCTaGTCTTTTCCAGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: RSEDGGEIPKASHRPQLQGPDSS*SFPGPG
Trigger: CCCTGGACCTGGAAAAGAGCAGCTGCTGTCTGGGCC...CTGCAGCTGGGGCCTGTGGGATGCCTTGGGAATCTCCCCTCCATCTTCACTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCGGCCCAGACAGCAGCTaGTCTTTTCCAGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: KAKVFSMQIGSQVGAVVPGPDSS*SFPGPG
Trigger: CCCTGGACCTGGAAAAGAGCAGCTGCTGTCTGGGCC...GGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp ACAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTCCGTGCCAACGTGCCTaGCCGGAAGAACACCCGGCT +
Preference number: 4 (lower is better)
Translates to: TESQGVFHADRQSGGGSGPCQRA*PEEHPA
Trigger: AGCCGGGTGTTCTTCCGGGCAGGCACGTTGGCACGG...ACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAATGGAACAGGGTCAGGTaGCTGCTGGTTTGCTCGTCT +
Preference number: 4 (lower is better)
Translates to: SAAWSCQTPTAWKVPLTEWNRVR*LLVCSS
Trigger: AGACGAGCAAACCAGCAGGCACCTGACCCTGTTCCA...TTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GAGTACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTAGCCCCGGCAGGCTaGCTGGAACAGGGTCAGGTG +
Preference number: 4 (lower is better)
Translates to: EYKAMAEGKGDGKQVQHQVAPAG*LEQGQV
Trigger: CACCTGACCCTGTTCCAGGCAGCCTGCCGGGGCTAC...CTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGTACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCCTTCTCAAGCTTGCTaGGCAGCTGCTGGATCTCCT +
Preference number: 4 (lower is better)
Translates to: SLERLCFAHLCRVELSDAPSQAC*AAAGSP
Trigger: AGGAGATCCAGCAGCTGCGCAGCAAGCTTGAGAAGG...GGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCTTCTCAAGCTTGCTaGGCAGCTGCTGGATCTCCT +
Preference number: 4 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRPSQAC*AAAGSP
Trigger: AGGAGATCCAGCAGCTGCGCAGCAAGCTTGAGAAGG...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCCTTCTCAAGCTTGCTaGGCAGCTGCTGGATCTCCT +
Preference number: 4 (lower is better)
Translates to: CRVELSDAHSLESPPDRKPSQAC*AAAGSP
Trigger: AGGAGATCCAGCAGCTGCGCAGCAAGCTTGAGAAGG...CTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCCACCTTCTCAAGCTTaGTGCGCAGCTGCTGGATCT +
Preference number: 4 (lower is better)
Translates to: CRVELSDAHSLESPPDRKPPSQA*CAAAGS
Trigger: AGATCCAGCAGCTGCGCAGCAAGCTTGAGAAGGTGG...CTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCGTTGATCTCGGCTaGCCGAATGAGCCGGGCTTC +
Preference number: 4 (lower is better)
Translates to: RKPRCFPCRSAVRWGQWCPVDLG*PNEPGF
Trigger: GAAGCCCGGCTCATTCGGGCAGCCGAGATCAACGGG...GCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCTCTCCAGCTGCCTCCTaGTCTGCTGTTCCACCTCCA +
Preference number: 4 (lower is better)
Translates to: KPRCFPCRSAVRWGQWCPSPAAS*SAVPPP
Trigger: TGGAGGTGGAACAGCAGAGCAGGAGGCAGCTGGAGA...GGGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTACTCTCATCACTATCTaGTTGCAGGTCCCCAAGCCG +
Preference number: 4 (lower is better)
Translates to: CFAHLCRVELSDAHSLESTLITI*LQVPKP
Trigger: CGGCTTGGGGACCTGCAAGCAGATAGTGATGAGAGT...ACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCCTTGAGCTGCTGCAGTaGCCGTTGACTCTCATCACT +
Preference number: 4 (lower is better)
Translates to: LWRDSASPTSAAWSCQTPLELLQ*PLTLIT
Trigger: AGTGATGAGAGTCAACGGGCACTGCAGCAGCTCAAG...GGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCTTGAGCTGCTGCAGTaGCCGTTGACTCTCATCACT +
Preference number: 4 (lower is better)
Translates to: CFAHLCRVELSDAHSLESLELLQ*PLTLIT
Trigger: AGTGATGAGAGTCAACGGGCACTGCAGCAGCTCAAG...ACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCTCGTGGTTTCGGACCTaGTGGCCCTCCAGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: RKPRCFPCRSAVRWGQWCSWFRT*WPSRCS
Trigger: GCTGCACCTGGAGGGCCAGCAGGTCCGAAACCACGA...GCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACTGTCGAACCTCCTCTaGTTCTTCTCCAGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: FGETLLRPPLPRGAVRRPLSNLL*FFSSSW
Trigger: CCACGAGCTGGAGAAGAAGCAGAGGAGGTTCGACAG...TGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCTGTCGAACCTCCTCTaGTTCTTCTCCAGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: SLERLCFAHLCRVELSDALSNLL*FFSSSW
Trigger: CCACGAGCTGGAGAAGAAGCAGAGGAGGTTCGACAG...GGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGATGGAGTTTCTCCCTCTaGAGCTTCTCCCGCTGCGTC +
Preference number: 4 (lower is better)
Translates to: ALFGETLLRPPLPRGAVRWSFSL*SFSRCV
Trigger: GACGCAGCGGGAGAAGCTGCAGAGGGAGAAACTCCA...TCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCTCCAAGTCCCGGAGCTaGTTCTTGACCTTGGCCAGA +
Preference number: 4 (lower is better)
Translates to: SLERLCFAHLCRVELSDASKSRS*FLTLAR
Trigger: TCTGGCCAAGGTCAAGAAGCAGCTCCGGGACTTGGA...GGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCTCCAAGTCCCGGAGCTaGTTCTTGACCTTGGCCAGA +
Preference number: 4 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRSKSRS*FLTLAR
Trigger: TCTGGCCAAGGTCAAGAAGCAGCTCCGGGACTTGGA...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAGACGCAGCTTGGCCTaGTCCAGCATCTGTATACTC +
Preference number: 4 (lower is better)
Translates to: LCRVELSDAHSLESPPDRRRSLA*SSICIL
Trigger: GAGTATACAGATGCTGGAGCAGGCCAAGCTGCGTCT...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGCATGATCTGGGCATCTaGCAGCAGCGCTTTGGTGCG +
Preference number: 4 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQHDLGI*QQRFGA
Trigger: CGCACCAAAGCGCTGCTGGCAGATGCCCAGATCATG...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGTGCCTTTACAGCTGCTaGACAGGTGAATTCCGACTC +
Preference number: 4 (lower is better)
Translates to: RLCFAHLCRVELSDAHSLCLYSC*TGEFRL
Trigger: GAGTCGGAATTCACCTGTGCAGCAGCTGTAAAGGCA...CAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCTCATCAATCTGCAGGTaGAGGTCTTCCATCTCCACC +
Preference number: 4 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSSSICR*RSSIST
Trigger: GGTGGAGATGGAAGACCTGCACCTGCAGATTGATGA...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGCGATGTCATCAATCTaGAGGTGCAGGTCTTCCATC +
Preference number: 4 (lower is better)
Translates to: RLCFAHLCRVELSDAHSLAMSSI*RCRSSI
Trigger: GATGGAAGACCTGCACCTGCAGATTGATGACATCGC...CAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCGCGATGTCATCAATCTaGAGGTGCAGGTCTTCCATC +
Preference number: 4 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSAMSSI*RCRSSI
Trigger: GATGGAAGACCTGCACCTGCAGATTGATGACATCGC...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCGCCACAGCTGCCTTGTaGTTCTTCATCAGCTCATTC +
Preference number: 4 (lower is better)
Translates to: ASPTSAAWSCQTPTAWKVATAAL*FFISSF
Trigger: GAATGAGCTGATGAAGAAGCACAAGGCAGCTGTGGC...GACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACGCCACAGCTGCCTTGTaGTTCTTCATCAGCTCATTC +
Preference number: 4 (lower is better)
Translates to: HLCRVELSDAHSLESPPDATAAL*FFISSF
Trigger: GAATGAGCTGATGAAGAAGCACAAGGCAGCTGTGGC...GTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAACTCCACCTGGCTCTaGAGAGCTTGTAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LERLCFAHLCRVELSDAHNSTWL*RACSFS
Trigger: GGAGAAGCTACAAGCTCTGCAGAGCCAGGTGGAGTT...GTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCAACTCCACCTGGCTCTaGAGAGCTTGTAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: AAWSCQTPTAWKVPLTESNSTWL*RACSFS
Trigger: GGAGAAGCTACAAGCTCTGCAGAGCCAGGTGGAGTT...GCTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGGCAGGCAGAGCTGGAAGCCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTTTGTCCACCATGGACTaGTCCAGGAACTCCACCTGG +
Preference number: 4 (lower is better)
Translates to: RQAELEAAGGCRWKRSALLSTMD*SRNSTW
Trigger: CCAGGTGGAGTTCCTGGAGCAGTCCATGGTGGACAA...AAGAGCTGATCTCTTCCACCTGCACCCACCCGCGGCTTCCAGCTCTGCCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAATTGTCCACCATGGACTaGTCCAGGAACTCCACCTGG +
Preference number: 4 (lower is better)
Translates to: SAAWSCQTPTAWKVPLTELSTMD*SRNSTW
Trigger: CCAGGTGGAGTTCCTGGAGCAGTCCATGGTGGACAA...TTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCTCCATCTCCAGTTCATaGTTCTTGCGGCTAGCCTCG +
Preference number: 4 (lower is better)
Translates to: AAWSCQTPTAWKVPLTESSISSS*FLRLAS
Trigger: CGAGGCTAGCCGCAAGAAGCATGAACTGGAGATGGA...GCTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGCTTTAGGTCGGCTTaGAGGCTTTGGTTAGCAGCT +
Preference number: 4 (lower is better)
Translates to: HLCRVELSDAHSLESPPDSFRSA*RLWLAA
Trigger: AGCTGCTAACCAAAGCCTGCAAGCCGACCTAAAGCT...GTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCTCCTCAATGGCAGCTTaGAAGTCCCCAATGCGTTTG +
Preference number: 4 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSSSMAA*KSPMRL
Trigger: CAAACGCATTGGGGACTTGCAAGCTGCCATTGAGGA...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCATCTTCAGCGGCAATCTaGTCTTCCGTCTTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: FGETLLRPPLPRGAVRRPSSAAI*SSVLAS
Trigger: GCTGGCCAAGACGGAAGAGCAGATTGCCGCTGAAGA...TGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100794.10
ENSMUST00000164334.8
CDS-3UTR GCA 90 bp AAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCCACCCCTTGAACATGTaGATCACCCGCTTCCGGGAC +
Preference number: 4 (lower is better)
Translates to: KPRCFPCRSAVRWGQWCPHPLNM*ITRFRD
Trigger: GTCCCGGAAGCGGGTGATGCACATGTTCAAGGGGTG...GGGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000167856.8
CDS-3UTR CCA 90 bp AGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCCCAGTGAACCGAACTTaGCTGCCCGCTGCAGCACAG +
Preference number: 4 (lower is better)
Translates to: SNGRREGGWQTGPAPGTAPVNRT*LPAAAQ
Trigger: CTGTGCTGCAGCGGGCAGCCAAGTTCGGTTCACTGG...GGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
CDS-3UTR CCA 90 bp AAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCCAGTGAACCGAACTTaGCTGCCCGCTGCAGCACAG +
Preference number: 4 (lower is better)
Translates to: KAKVFSMQIGSQVGAVVPPVNRT*LPAAAQ
Trigger: CTGTGCTGCAGCGGGCAGCCAAGTTCGGTTCACTGG...GGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CCA 90 bp CCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTAAATAACTGCTCATTGCACCCGGAGAGCAGGAGGTaGTGGTGGCACCAGAGCGGG +
Preference number: 4 (lower is better)
Translates to: PRVGAGGRDQLLNNCSLHPESRR*WWHQSG
Trigger: CCCGCTCTGGTGCCACCACCACCTCCTGCTCTCCGG...GTGCAATGAGCAGTTATTTAAGAGCTGATCTCTTCCACCTGCACCCACCCGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
CDS-3UTR CCA 90 bp ACAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTCCAAGGCCAGGTCCTTaGTGCCTGCCCCTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: TESQGVFHADRQSGGGSGPRPGP*CLPLAQ
Trigger: CTGAGCCAGGGGCAGGCACCAAGGACCTGGCCTTGG...ACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CCA 90 bp TGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCAGCTCGCTAAGCTCTaGGATGGGCTGTACCTTGAG +
Preference number: 4 (lower is better)
Translates to: CRVELSDAHSLESPPDRKQLAKL*DGLYLE
Trigger: CTCAAGGTACAGCCCATCCCAGAGCTTAGCGAGCTG...CTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CCA 90 bp TCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAACAGCTCGCTAAGCTCTaGGATGGGCTGTACCTTGAG +
Preference number: 4 (lower is better)
Translates to: SAAWSCQTPTAWKVPLTEQLAKL*DGLYLE
Trigger: CTCAAGGTACAGCCCATCCCAGAGCTTAGCGAGCTG...TTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CCA 90 bp TTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCTCGCTAAGCTCTaGGATGGGCTGTACCTTGAG +
Preference number: 4 (lower is better)
Translates to: FGETLLRPPLPRGAVRRPQLAKL*DGLYLE
Trigger: CTCAAGGTACAGCCCATCCCAGAGCTTAGCGAGCTG...TGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CCA 90 bp AAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCAGGATGGCTCCGTCATaGTCCAGCTTCACACGCGCC +
Preference number: 4 (lower is better)
Translates to: KAKVFSMQIGSQVGAVVPRMAPS*SSFTRA
Trigger: GGCGCGTGTGAAGCTGGACCATGACGGAGCCATCCT...GGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGGCAGGCAGAGCTGGAAGCCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTCATCCACATCCAGGATaGCTCCGTCATGGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: RQAELEAAGGCRWKRSALHPHPG*LRHGPA
Trigger: AGCTGGACCATGACGGAGCCATCCTGGATGTGGATG...AAGAGCTGATCTCTTCCACCTGCACCCACCCGCGGCTTCCAGCTCTGCCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGTACCCAGAAGGACAATaGACTGGTCCTGACGACTCA +
Preference number: 4 (lower is better)
Translates to: RLCFAHLCRVELSDAHSLYPEGQ*TGPDDS
Trigger: TGAGTCGTCAGGACCAGTCCATTGTCCTTCTGGGTA...CAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCCCACTGAGAACACCTTaGTCCCACTGGTACCCGCGA +
Preference number: 4 (lower is better)
Translates to: KPRCFPCRSAVRWGQWCPPLRTP*SHWYPR
Trigger: TCGCGGGTACCAGTGGGACCAAGGTGTTCTCAGTGG...GGGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGCCACTGAGAACACCTTaGTCCCACTGGTACCCGCGA +
Preference number: 4 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQPLRTP*SHWYPR
Trigger: TCGCGGGTACCAGTGGGACCAAGGTGTTCTCAGTGG...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCGCCACCTGGCCAGCTTaGTCAAAGTCCAGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: KAKVFSMQIGSQVGAVVPATWPA*SKSRER
Trigger: CCTCTCCCTGGACTTTGACCAAGCTGGCCAGGTGGC...GGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGAAGTGAAGATGGAGGGGAGATTCCCAAGGCATCCCACAGGCCCCAGCTGCAGGAGGCCGAAGCCACCTaGCCAGCTTGGTCAAAGTCC +
Preference number: 4 (lower is better)
Translates to: RSEDGGEIPKASHRPQLQEAEAT*PAWSKS
Trigger: GGACTTTGACCAAGCTGGCCAGGTGGCTTCGGCCTC...CTGCAGCTGGGGCCTGTGGGATGCCTTGGGAATCTCCCCTCCATCTTCACTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGAGCCAAGTGGTTCAGGTaGAGCTCTGTCCTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: ALFGETLLRPPLPRGAVRAKWFR*SSVLRV
Trigger: CACCCTCAGGACAGAGCTCCACCTGAACCACTTGGC...TCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCTGGAGAAGTGAAGATGGAGGGGAGATTCCCAAGGCATCCCACAGGCCCCAGGTTCCTCGGGGGAGATaGCCAGCACCTTCATGGCAG +
Preference number: 4 (lower is better)
Translates to: LWRSEDGGEIPKASHRPQVPRGR*PAPSWQ
Trigger: CTGCCATGAAGGTGCTGGCCATCTCCCCCGAGGAAC...CTGGGGCCTGTGGGATGCCTTGGGAATCTCCCCTCCATCTTCACTTCTCCAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAATTCTGGGCCCATTCGTaGCGGGCAAACTGCTTTCGT +
Preference number: 4 (lower is better)
Translates to: SAAWSCQTPTAWKVPLTEFWAHS*RANCFR
Trigger: ACGAAAGCAGTTTGCCCGCCACGAATGGGCCCAGAA...TTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCATTCTGGGCCCATTCGTaGCGGGCAAACTGCTTTCGT +
Preference number: 4 (lower is better)
Translates to: FGETLLRPPLPRGAVRRPFWAHS*RANCFR
Trigger: ACGAAAGCAGTTTGCCCGCCACGAATGGGCCCAGAA...TGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCAGGTATGCTGCCTTCTaGGCCCATTCGTGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: SNGRREGGWQTGPAPGTARYAAF*AHSWRA
Trigger: TGCCCGCCACGAATGGGCCCAGAAGGCAGCATACCT...GGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCTGGAGAAGTGAAGATGGAGGGGAGATTCCCAAGGCATCCCACAGGCCCCAGAGGTATGCTGCCTTCTaGGCCCATTCGTGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: LWRSEDGGEIPKASHRPQRYAAF*AHSWRA
Trigger: TGCCCGCCACGAATGGGCCCAGAAGGCAGCATACCT...CTGGGGCCTGTGGGATGCCTTGGGAATCTCCCCTCCATCTTCACTTCTCCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGGTGCCTCCTTTTAGCTaGTGTTTGAAGATAGCCGAG +
Preference number: 4 (lower is better)
Translates to: PTSAAWSCQTPTAWKVPLVPPFS*CLKIAE
Trigger: CTCGGCTATCTTCAAACACCAGCTAAAAGGAGGCAC...CAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCTGACGGAAGGAGGTaGACCGTTGCAGGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: QKAKVFSMQIGSQVGAVVPDGRR*TVAGCL
Trigger: GAGGCACCCTGCAACGGTCCACCTCCTTCCGTCAGG...CACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCAGAGCACTCAGTTTaGTGCCCTCTCCCAGGCCGC +
Preference number: 4 (lower is better)
Translates to: RKPRCFPCRSAVRWGQWCPEHSV*CPLPGR
Trigger: GCGGCCTGGGAGAGGGCACCAAACTGAGTGCTCTGG...GCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCGAACAGAGTGAGTGCTaGCTGGACTTGAGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: LFGETLLRPPLPRGAVRREQSEC*LDLRAL
Trigger: CAGGGCTCTCAAGTCCAGCCAGCACTCACTCTGTTC...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCGAACAGAGTGAGTGCTaGCTGGACTTGAGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: SLERLCFAHLCRVELSDAEQSEC*LDLRAL
Trigger: CAGGGCTCTCAAGTCCAGCCAGCACTCACTCTGTTC...GGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCAGAACAGAGTGAGTGCTaGCTGGACTTGAGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: FGETLLRPPLPRGAVRRPEQSEC*LDLRAL
Trigger: CAGGGCTCTCAAGTCCAGCCAGCACTCACTCTGTTC...TGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCAGGAAGGTGCGCTCGTaGAACAGCCTCTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: SNGRREGGWQTGPAPGTARKVRS*NSLCSL
Trigger: CAGGCTGCAGAGGCTGTTCCACGAGCGCACCTTCCT...GGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCTATCTCTCCAACTCCTaGAGGAAGGTGCGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: SLERLCFAHLCRVELSDAYLSNS*RKVRSW
Trigger: CCACGAGCGCACCTTCCTCCAGGAGTTGGAGAGATA...GGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAATATCTCTCCAACTCCTaGAGGAAGGTGCGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: SAAWSCQTPTAWKVPLTEYLSNS*RKVRSW
Trigger: CCACGAGCGCACCTTCCTCCAGGAGTTGGAGAGATA...TTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCATATCTCTCCAACTCCTaGAGGAAGGTGCGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: FGETLLRPPLPRGAVRRPYLSNS*RKVRSW
Trigger: CCACGAGCGCACCTTCCTCCAGGAGTTGGAGAGATA...TGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACGGAGTCATCTGCAACTaGCTCCAAGTCATCAAACGC +
Preference number: 4 (lower is better)
Translates to: HLCRVELSDAHSLESPPDGVICN*LQVIKR
Trigger: GCGTTTGATGACTTGGAGCCAGTTGCAGATGACTCC...GTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCGGAGTCATCTGCAACTaGCTCCAAGTCATCAAACGC +
Preference number: 4 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSGVICN*LQVIKR
Trigger: GCGTTTGATGACTTGGAGCCAGTTGCAGATGACTCC...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGAAGTGAGCGAACCAGGTaGGAAGCCTGGTCCACAGCA +
Preference number: 4 (lower is better)
Translates to: ALFGETLLRPPLPRGAVRSERTR*EAWSTA
Trigger: TGCTGTGGACCAGGCTTCCCACCTGGTTCGCTCACT...TCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGTTGGTACCGTGGCTGTaGCCCAGGAGAAAGTGCCGA +
Preference number: 4 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQLVPWL*PRRKCR
Trigger: TCGGCACTTTCTCCTGGGCCACAGCCACGGTACCAA...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACACCCAGTTGGTACCGTaGCTGTGGCCCAGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: LSLERLCFAHLCRVELSDTQLVP*LWPRRK
Trigger: CTTTCTCCTGGGCCACAGCCACGGTACCAACTGGGT...GTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGAACCCAGTTGGTACCGTaGCTGTGGCCCAGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: ALFGETLLRPPLPRGAVRTQLVP*LWPRRK
Trigger: CTTTCTCCTGGGCCACAGCCACGGTACCAACTGGGT...TCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACTGTACTCCACCCAGTTaGTACCGTGGCTGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: LSLERLCFAHLCRVELSDCTPPS*YRGCGP
Trigger: TGGGCCACAGCCACGGTACCAACTGGGTGGAGTACA...GTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGTGTACTCCACCCAGTTaGTACCGTGGCTGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQCTPPS*YRGCGP
Trigger: TGGGCCACAGCCACGGTACCAACTGGGTGGAGTACA...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCTGTACTCCACCCAGTTaGTACCGTGGCTGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: KPRCFPCRSAVRWGQWCPCTPPS*YRGCGP
Trigger: TGGGCCACAGCCACGGTACCAACTGGGTGGAGTACA...GGGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCTGGCTGGGTTCTGCTTaGTGTAATTCAGCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: AAWSCQTPTAWKVPLTESWLGSA*CNSASQ
Trigger: CTGGCTGGCTGAATTACACCAAGCAGAACCCAGCCA...GCTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGATGGCTGGGTTCTGCTTaGTGTAATTCAGCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: LCRVELSDAHSLESPPDRWLGSA*CNSASQ
Trigger: CTGGCTGGCTGAATTACACCAAGCAGAACCCAGCCA...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCGGGGTGCATTCTGGGTaGCTGGGTTCTGCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: KPRCFPCRSAVRWGQWCPGVHSG*LGSAWC
Trigger: ACACCAAGCAGAACCCAGCCACCCAGAATGCACCCC...GGGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGAGGGGTGCATTCTGGGTaGCTGGGTTCTGCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: ALFGETLLRPPLPRGAVRGVHSG*LGSAWC
Trigger: ACACCAAGCAGAACCCAGCCACCCAGAATGCACCCC...TCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCAGCCGGGGTGCATTCTaGGTGGCTGGGTTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: SNGRREGGWQTGPAPGTASRGAF*VAGFCL
Trigger: CAAGCAGAACCCAGCCACCCAGAATGCACCCCGGCT...GGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCAGCCGGGGTGCATTCTaGGTGGCTGGGTTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: KAKVFSMQIGSQVGAVVPSRGAF*VAGFCL
Trigger: CAAGCAGAACCCAGCCACCCAGAATGCACCCCGGCT...GGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGCTGATGATCTTTTTCTaGGAGTCCTGCAGAAGCCGG +
Preference number: 4 (lower is better)
Translates to: RLCFAHLCRVELSDAHSLLMIFF*ESCRSR
Trigger: CCGGCTTCTGCAGGACTCCCAGAAAAAGATCATCAG...CAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACCTGATGATCTTTTTCTaGGAGTCCTGCAGAAGCCGG +
Preference number: 4 (lower is better)
Translates to: HLCRVELSDAHSLESPPDLMIFF*ESCRSR
Trigger: CCGGCTTCTGCAGGACTCCCAGAAAAAGATCATCAG...GTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACTTTCTTGGTCAGGTGTaGAGCCAGGACATCAAAGCG +
Preference number: 4 (lower is better)
Translates to: HLCRVELSDAHSLESPPDFLGQV*SQDIKA
Trigger: CGCTTTGATGTCCTGGCTCCACACCTGACCAAGAAA...GTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCTTTCTTGGTCAGGTGTaGAGCCAGGACATCAAAGCG +
Preference number: 4 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSFLGQV*SQDIKA
Trigger: CGCTTTGATGTCCTGGCTCCACACCTGACCAAGAAA...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGTTTCTTGGTCAGGTGTaGAGCCAGGACATCAAAGCG +
Preference number: 4 (lower is better)
Translates to: RLCFAHLCRVELSDAHSLFLGQV*SQDIKA
Trigger: CGCTTTGATGTCCTGGCTCCACACCTGACCAAGAAA...CAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGATCTGCACACAGCGAATaGCCAGGTCCTGGATCTTTC +
Preference number: 4 (lower is better)
Translates to: LCRVELSDAHSLESPPDRSAHSE*PGPGSF
Trigger: GAAAGATCCAGGACCTGGCCATTCGCTGTGTGCAGA...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCTCTGCACACAGCGAATaGCCAGGTCCTGGATCTTTC +
Preference number: 4 (lower is better)
Translates to: LWRDSASPTSAAWSCQTPSAHSE*PGPGSF
Trigger: GAAAGATCCAGGACCTGGCCATTCGCTGTGTGCAGA...GGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCCTCCAGGTGCAGCTTaGTGTCCTGCAGCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: KAKVFSMQIGSQVGAVVPPPGAA*CPAAQL
Trigger: CAGCTGAGCTGCAGGACACCAAGCTGCACCTGGAGG...GGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCTTCTTCTCCAGCTCGTaGTTTCGGACCTGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: KPRCFPCRSAVRWGQWCPFFSSS*FRTCWP
Trigger: GGGCCAGCAGGTCCGAAACCACGAGCTGGAGAAGAA...GGGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGGTCTCCTCGTGGGCCTaGGAAAGCTCACTGTCGAAC +
Preference number: 4 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQVSSWA*ESSLSN
Trigger: GTTCGACAGTGAGCTTTCCCAGGCCCACGAGGAGAC...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCGTCTCCTCGTGGGCCTaGGAAAGCTCACTGTCGAAC +
Preference number: 4 (lower is better)
Translates to: KPRCFPCRSAVRWGQWCPVSSWA*ESSLSN
Trigger: GTTCGACAGTGAGCTTTCCCAGGCCCACGAGGAGAC...GGGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCATGTCCTTCTCCCGCTaGAGTTTCTCCCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRMSFSR*SFSLCS
Trigger: GCTGCAGAGGGAGAAACTCCAGCGGGAGAAGGACAT...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCAATGTCCTTCTCCCGCTaGAGTTTCTCCCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: FGETLLRPPLPRGAVRRPMSFSR*SFSLCS
Trigger: GCTGCAGAGGGAGAAACTCCAGCGGGAGAAGGACAT...TGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGGCAGGCAGAGCTGGAAGCCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTATGTCCTTCTCCCGCTaGAGTTTCTCCCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: RQAELEAAGGCRWKRSALMSFSR*SFSLCS
Trigger: GCTGCAGAGGGAGAAACTCCAGCGGGAGAAGGACAT...AAGAGCTGATCTCTTCCACCTGCACCCACCCGCGGCTTCCAGCTCTGCCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAATCTCCAGACGCAGCTTaGCCTGCTCCAGCATCTGTA +
Preference number: 4 (lower is better)
Translates to: SAAWSCQTPTAWKVPLTESPDAA*PAPASV
Trigger: TACAGATGCTGGAGCAGGCCAAGCTGCGTCTGGAGA...TTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGGCAGGCAGAGCTGGAAGCCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTTCTCCAGACGCAGCTTaGCCTGCTCCAGCATCTGTA +
Preference number: 4 (lower is better)
Translates to: RQAELEAAGGCRWKRSALSPDAA*PAPASV
Trigger: TACAGATGCTGGAGCAGGCCAAGCTGCGTCTGGAGA...AAGAGCTGATCTCTTCCACCTGCACCCACCCGCGGCTTCCAGCTCTGCCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCTCTCCAGACGCAGCTTaGCCTGCTCCAGCATCTGTA +
Preference number: 4 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRSPDAA*PAPASV
Trigger: TACAGATGCTGGAGCAGGCCAAGCTGCGTCTGGAGA...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp ACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGATTCAAAGTCCCGCTaGTTCACCTGGTCACTGAGC +
Preference number: 4 (lower is better)
Translates to: TSAAWSCQTPTAWKVPLTDSKSR*FTWSLS
Trigger: GCTCAGTGACCAGGTGAACCAGCGGGACTTTGAATC...TGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAGATTCAAAGTCCCGCTaGTTCACCTGGTCACTGAGC +
Preference number: 4 (lower is better)
Translates to: LCRVELSDAHSLESPPDRDSKSR*FTWSLS
Trigger: GCTCAGTGACCAGGTGAACCAGCGGGACTTTGAATC...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACGATTCAAAGTCCCGCTaGTTCACCTGGTCACTGAGC +
Preference number: 4 (lower is better)
Translates to: LERLCFAHLCRVELSDAHDSKSR*FTWSLS
Trigger: GCTCAGTGACCAGGTGAACCAGCGGGACTTTGAATC...GTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCCTGCCAGCAGCGCTTTaGTGCGCTTCAGGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: KPRCFPCRSAVRWGQWCPLPAAL*CASGLS
Trigger: GGAAAGACCTGAAGCGCACCAAAGCGCTGCTGGCAG...GGGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCGCATTGTTCTTTAAGTaGTCCAGCATGATCTGGGCA +
Preference number: 4 (lower is better)
Translates to: RPPLPRGAVRRPQPGKSPALFFK*SSMIWA
Trigger: TGCCCAGATCATGCTGGACCACTTAAAGAACAATGC...GGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGCAGGAGGCTGAGATGGAGGTCCACCACCGGCTCCATGGAATGCCAGGCCACCAGCTGGTTCTTCAGCTaGGCAATCTCCCTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: SRRLRWRSTTGSMECQATSWFFS*AISLLL
Trigger: GAGCAAGAGGGAGATTGCCCAGCTGAAGAACCAGCT...GGTGGCCTGGCATTCCATGGAGCCGGTGGTGGACCTCCATCTCAGCCTCCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACTCCGACTCTTCCAGCTaGTTCTTCAGCTGGGCAATC +
Preference number: 4 (lower is better)
Translates to: LERLCFAHLCRVELSDAHSDSSS*FFSWAI
Trigger: GATTGCCCAGCTGAAGAACCAGCTGGAAGAGTCGGA...GTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGCAGGAGGCTGAGATGGAGGTCCACCACCGGCTCCATGGAATGCCAGGCCACCTCCGACTCTTCCAGCTaGTTCTTCAGCTGGGCAATC +
Preference number: 4 (lower is better)
Translates to: SRRLRWRSTTGSMECQATSDSSS*FFSWAI
Trigger: GATTGCCCAGCTGAAGAACCAGCTGGAAGAGTCGGA...GGTGGCCTGGCATTCCATGGAGCCGGTGGTGGACCTCCATCTCAGCCTCCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTTCCGACTCTTCCAGCTaGTTCTTCAGCTGGGCAATC +
Preference number: 4 (lower is better)
Translates to: CFAHLCRVELSDAHSLESSDSSS*FFSWAI
Trigger: GATTGCCCAGCTGAAGAACCAGCTGGAAGAGTCGGA...ACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCGCGCTGTCTTGGCTTTaGCGATGTCATCAATCTGCA +
Preference number: 4 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSALSWL*RCHQSA
Trigger: TGCAGATTGATGACATCGCCAAAGCCAAGACAGCGC...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCCCTCCAGCGCTGTCTTaGCTTTGGCGATGTCATCAA +
Preference number: 4 (lower is better)
Translates to: LWRDSASPTSAAWSCQTPPPALS*LWRCHQ
Trigger: TTGATGACATCGCCAAAGCCAAGACAGCGCTGGAGG...GGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCTCCAGCGCTGTCTTaGCTTTGGCGATGTCATCAA +
Preference number: 4 (lower is better)
Translates to: CFAHLCRVELSDAHSLESPPALS*LWRCHQ
Trigger: TTGATGACATCGCCAAAGCCAAGACAGCGCTGGAGG...ACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp ACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACATGTCCCGGGAGGCCTaGGCCACAGCTGCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: TKQWQKGRGMANRSSTRYMSREA*ATAALC
Trigger: GCACAAGGCAGCTGTGGCCCAGGCCTCCCGGGACAT...GTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp ACAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTATGTCCCGGGAGGCCTaGGCCACAGCTGCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: TESQGVFHADRQSGGGSGMSREA*ATAALC
Trigger: GCACAAGGCAGCTGTGGCCCAGGCCTCCCGGGACAT...ACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCCTTGCTTCTCCTTGTTaGACTCTTCAATCTGAGCCT +
Preference number: 4 (lower is better)
Translates to: RPPLPRGAVRRPQPGKSPLASPC*TLQSEP
Trigger: AGGCTCAGATTGAAGAGTCCAACAAGGAGAAGCAAG...GGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGTCCAGGAACTCCACCTaGCTCTGCAGAGCTTGTAGC +
Preference number: 4 (lower is better)
Translates to: CRVELSDAHSLESPPDRKSRNST*LCRACS
Trigger: GCTACAAGCTCTGCAGAGCCAGGTGGAGTTCCTGGA...CTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCATCCAGGAACTCCACCTaGCTCTGCAGAGCTTGTAGC +
Preference number: 4 (lower is better)
Translates to: FGETLLRPPLPRGAVRRPSRNST*LCRACS
Trigger: GCTACAAGCTCTGCAGAGCCAGGTGGAGTTCCTGGA...TGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCTCCAGGCGCTTCACTTaGGTCTTTTCGAACTCCAGG +
Preference number: 4 (lower is better)
Translates to: AAWSCQTPTAWKVPLTESSRRFT*VFSNSR
Trigger: CCTGGAGTTCGAAAAGACCCAAGTGAAGCGCCTGGA...GCTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTTCCAGGCGCTTCACTTaGGTCTTTTCGAACTCCAGG +
Preference number: 4 (lower is better)
Translates to: CFAHLCRVELSDAHSLESSRRFT*VFSNSR
Trigger: CCTGGAGTTCGAAAAGACCCAAGTGAAGCGCCTGGA...ACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGCAGGAGGCTGAGATGGAGGTCCACCACCGGCTCCATGGAATGCCAGGCCACCTCCAGGCGCTTCACTTaGGTCTTTTCGAACTCCAGG +
Preference number: 4 (lower is better)
Translates to: SRRLRWRSTTGSMECQATSRRFT*VFSNSR
Trigger: CCTGGAGTTCGAAAAGACCCAAGTGAAGCGCCTGGA...GGTGGCCTGGCATTCCATGGAGCCGGTGGTGGACCTCCATCTCAGCCTCCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCGCTCATCTCCTCCTTaGTGTCACGAAGCTGTCGCT +
Preference number: 4 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRRSSPP*CHEAVA
Trigger: AGCGACAGCTTCGTGACACCAAGGAGGAGATGAGCG...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAACGCTCATCTCCTCCTTaGTGTCACGAAGCTGTCGCT +
Preference number: 4 (lower is better)
Translates to: SAAWSCQTPTAWKVPLTERSSPP*CHEAVA
Trigger: AGCGACAGCTTCGTGACACCAAGGAGGAGATGAGCG...TTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACCCTCGGCTTCCTTCCTaGCAAGCTCGCTCATCTCCT +
Preference number: 4 (lower is better)
Translates to: LSLERLCFAHLCRVELSDPRLPS*QARSSP
Trigger: AGGAGATGAGCGAGCTTGCCAGGAAGGAAGCCGAGG...GTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGTCGGCTTGCAGGCTTTaGTTAGCAGCTTCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: CRVELSDAHSLESPPDRKSACRL*LAASRL
Trigger: GAGCCTGGAAGCTGCTAACCAAAGCCTGCAAGCCGA...CTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACCCATCTCATCCTCAATaGCAGCTTGCAAGTCCCCAA +
Preference number: 4 (lower is better)
Translates to: HLCRVELSDAHSLESPPDPSHPQ*QLASPQ
Trigger: TTGGGGACTTGCAAGCTGCCATTGAGGATGAGATGG...GTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCAGTGGCTGGTTGGGCTaGAACTCTTCAAGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: LWRDSASPTSAAWSCQTPSGWLG*NSSSCH
Trigger: ATGGCAGCTTGAAGAGTTCCAGCCCAACCAGCCACT...GGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCGTGGCTTCCAGTGGCTaGTTGGGCTGGAACTCTTCA +
Preference number: 4 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRVASSG*LGWNSS
Trigger: TGAAGAGTTCCAGCCCAACCAGCCACTGGAAGCCAC...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCTGGTCTCTGTCAGCTTaGCCTCTGTGTCGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRWSLSA*PLCRCH
Trigger: GTGACAGCGACACAGAGGCCAAGCTGACAGAGACCA...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp ACTCAGATAGCTGTGGGAGAACCGGGGTCTGGAGATGCTGTCCACAGGATCATGTCGCACCTCCTGCCCTaGGCCTGGTCAGGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: TQIAVGEPGSGDAVHRIMSHLLP*AWSGSS
Trigger: GGAGGAACCTGACCAGGCCCAGGGCAGGAGGTGCGA...CATGATCCTGTGGACAGCATCTCCAGACCCCGGTTCTCCCACAGCTATCTGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS-3UTR CCA 90 bp GCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGATCTGCTCTTCCGTCTTaGCCTGGCTGTAGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: ALFGETLLRPPLPRGAVRSALPS*PGCRQE
Trigger: CTCCTGCCTACAGCCAGGCCAAGACGGAAGAGCAGA...TCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000130305.9
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGTCTGCTCTTCCGTCTTaGCCTGGCTGTAGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQSALPS*PGCRQE
Trigger: CTCCTGCCTACAGCCAGGCCAAGACGGAAGAGCAGA...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000130305.9
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCAAAGCAGAGGGCTCCTaGGTGGGGCAGGAGCACCCT +
Preference number: 4 (lower is better)
Translates to: RKPRCFPCRSAVRWGQWCKAEGS*VGQEHP
Trigger: AGGGTGCTCCTGCCCCACCCAGGAGCCCTCTGCTTT...GCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000168348.8
CDS-3UTR TCA 90 bp GCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGAGTCCTGAGTCCAGGATaGTGCTACCCCGATTGCTGT +
Preference number: 4 (lower is better)
Translates to: ALFGETLLRPPLPRGAVRVLSPG*CYPDCC
Trigger: ACAGCAATCGGGGTAGCATCATCCTGGACTCAGGAC...TCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR TCA 90 bp CTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACTGCCTTCTTCACCCTTaGGGTCATCACTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: LSLERLCFAHLCRVELSDCLLHP*GHHWSW
Trigger: CCAGCTCCAGTGATGACCTCAAGGGTGAAGAAGGCA...GTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR TCA 90 bp GCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCGTTTGACAATCATCTaGGAGTTCTGCTTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: ASPTSAAWSCQTPTAWKVRLTII*EFCLAS
Trigger: ACTGGCCAAGCAGAACTCTCAGATGATTGTCAAACG...GACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR TCA 90 bp AAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCGGTTGTGCGCCGCAGTaGGAAGCCAAAGTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: KAKVFSMQIGSQVGAVVPGCAPQ*EAKVSC
Trigger: ACAGGAGACTTTGGCTTCTCACTGCGGCGCACAACC...GGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR TCA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGGTGCATCACCTTCTCTaGATACACAGCAGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQVHHLL*IHSRSP
Trigger: GGGGCTCCTGCTGTGTATTCAGAGAAGGTGATGCAC...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCCCGCCGACACCCCTTaGACATGTGCATCACCTTCT +
Preference number: 4 (lower is better)
Translates to: KAKVFSMQIGSQVGAVVPPADTP*TCASPS
Trigger: AGAAGGTGATGCACATGTTCAAGGGGTGTCGGCGGG...GGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCCCCGCCGACACCCCTTaGACATGTGCATCACCTTCT +
Preference number: 4 (lower is better)
Translates to: SNGRREGGWQTGPAPGTAPADTP*TCASPS
Trigger: AGAAGGTGATGCACATGTTCAAGGGGTGTCGGCGGG...GGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGATACTGCACCAGATGCTaGAAGCTGGTAGTCTTGCCA +
Preference number: 4 (lower is better)
Translates to: LCRVELSDAHSLESPPDRYCTRC*KLVVLP
Trigger: TGGCAAGACTACCAGCTTTCAGCATCTGGTGCAGTA...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGTGGCACTGCCATTCATaGTGGTGGGGCTGTTCCCAA +
Preference number: 4 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQWHCHS*WWGCSQ
Trigger: TTGGGAACAGCCCCACCATCATGAATGGCAGTGCCA...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp TCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCAGATGGAAGCCAGGATaGGCCAGCAGGTCTTCTGTT +
Preference number: 4 (lower is better)
Translates to: SLERLCFAHLCRVELSDARWKPG*ASRSSV
Trigger: AACAGAAGACCTGCTGGCTCATCCTGGCTTCCATCT...GGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp TCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGATGGAAGCCAGGATaGGCCAGCAGGTCTTCTGTT +
Preference number: 4 (lower is better)
Translates to: SAAWSCQTPTAWKVPLTERWKPG*ASRSSV
Trigger: AACAGAAGACCTGCTGGCTCATCCTGGCTTCCATCT...TTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp TGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGAGATGGAAGCCAGGATaGGCCAGCAGGTCTTCTGTT +
Preference number: 4 (lower is better)
Translates to: CRVELSDAHSLESPPDRKRWKPG*ASRSSV
Trigger: AACAGAAGACCTGCTGGCTCATCCTGGCTTCCATCT...CTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCAGTGCTGGCTGGACTTaGGAGCCCTGTTTACCAGGG +
Preference number: 4 (lower is better)
Translates to: KAKVFSMQIGSQVGAVVPSAGWT*EPCLPG
Trigger: CCCTGGTAAACAGGGCTCTCAAGTCCAGCCAGCACT...GGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp TCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCATCATGGAACAGAGTaGGTGCTGGCTGGACTTGAG +
Preference number: 4 (lower is better)
Translates to: SLERLCFAHLCRVELSDAHHGTE*VLAGLE
Trigger: CTCAAGTCCAGCCAGCACTCACTCTGTTCCATGATG...GGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCATCATGGAACAGAGTaGGTGCTGGCTGGACTTGAG +
Preference number: 4 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRHHGTE*VLAGLE
Trigger: CTCAAGTCCAGCCAGCACTCACTCTGTTCCATGATG...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCGGCCATGCCGGTGGTaGAGGTTTTCCTCATGCTGG +
Preference number: 4 (lower is better)
Translates to: RKPRCFPCRSAVRWGQWCRPCRW*RFSSCW
Trigger: CCAGCATGAGGAAAACCTTCACCACCGGCATGGCCG...GCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp TGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGGGATCTTTCTCTTCTTaGAGTGCTGGCGGGCAAGGT +
Preference number: 4 (lower is better)
Translates to: CRVELSDAHSLESPPDRKGSFSS*SAGGQG
Trigger: ACCTTGCCCGCCAGCACTTCAAGAAGAGAAAGATCC...CTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp TCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAGGATCTTTCTCTTCTTaGAGTGCTGGCGGGCAAGGT +
Preference number: 4 (lower is better)
Translates to: SAAWSCQTPTAWKVPLTEGSFSS*SAGGQG
Trigger: ACCTTGCCCGCCAGCACTTCAAGAAGAGAAAGATCC...TTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp TTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCAGGATCTTTCTCTTCTTaGAGTGCTGGCGGGCAAGGT +
Preference number: 4 (lower is better)
Translates to: FGETLLRPPLPRGAVRRPGSFSS*SAGGQG
Trigger: ACCTTGCCCGCCAGCACTTCAAGAAGAGAAAGATCC...TGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp TTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCATCGGATCTGCTCCTCTaGCAGCTGAACTTGGATGAG +
Preference number: 4 (lower is better)
Translates to: FGETLLRPPLPRGAVRRPSDLLL*QLNLDE
Trigger: CTCATCCAAGTTCAGCTGTCAGAGGAGCAGATCCGA...TGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AGGCAGGCAGAGCTGGAAGCCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTTCGGATCTGCTCCTCTaGCAGCTGAACTTGGATGAG +
Preference number: 4 (lower is better)
Translates to: RQAELEAAGGCRWKRSALSDLLL*QLNLDE
Trigger: CTCATCCAAGTTCAGCTGTCAGAGGAGCAGATCCGA...AAGAGCTGATCTCTTCCACCTGCACCCACCCGCGGCTTCCAGCTCTGCCTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp TCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCTCGGATCTGCTCCTCTaGCAGCTGAACTTGGATGAG +
Preference number: 4 (lower is better)
Translates to: SLERLCFAHLCRVELSDASDLLL*QLNLDE
Trigger: CTCATCCAAGTTCAGCTGTCAGAGGAGCAGATCCGA...GGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGTCTCGGCTGCCCGAATaGGCCGGGCTTCCATCACTT +
Preference number: 4 (lower is better)
Translates to: QKAKVFSMQIGSQVGAVVSRLPE*AGLPSL
Trigger: AAGTGATGGAAGCCCGGCTCATTCGGGCAGCCGAGA...CACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCGGAGCCGCTTCTTGGTaGAGTCCACCTCCCGAACAG +
Preference number: 4 (lower is better)
Translates to: RKPRCFPCRSAVRWGQWCGAASW*SPPPEQ
Trigger: CTGTTCGGGAGGTGGACTTCACCAAGAAGCGGCTCC...GCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp TTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCATTTGGCACTTCTTCTTaGGCTGCTGCAGTGCCCGTT +
Preference number: 4 (lower is better)
Translates to: FGETLLRPPLPRGAVRRPFGTSS*AAAVPV
Trigger: AACGGGCACTGCAGCAGCTCAAGAAGAAGTGCCAAA...TGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp TCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAATTTGGCACTTCTTCTTaGGCTGCTGCAGTGCCCGTT +
Preference number: 4 (lower is better)
Translates to: SAAWSCQTPTAWKVPLTEFGTSS*AAAVPV
Trigger: AACGGGCACTGCAGCAGCTCAAGAAGAAGTGCCAAA...TTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AGGCAGGCAGAGCTGGAAGCCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTTTTGGCACTTCTTCTTaGGCTGCTGCAGTGCCCGTT +
Preference number: 4 (lower is better)
Translates to: RQAELEAAGGCRWKRSALFGTSS*AAAVPV
Trigger: AACGGGCACTGCAGCAGCTCAAGAAGAAGTGCCAAA...AAGAGCTGATCTCTTCCACCTGCACCCACCCGCGGCTTCCAGCTCTGCCTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AGGCAGGCAGAGCTGGAAGCCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTTTTGCTGCTTCAAGCTaGAAGCCTCAGCCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: RQAELEAAGGCRWKRSALFAASS*KPQPGA
Trigger: TGCTCCTGGCTGAGGCTTTCAGCTTGAAGCAGCAAA...AAGAGCTGATCTCTTCCACCTGCACCCACCCGCGGCTTCCAGCTCTGCCTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp TCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCTTTGCTGCTTCAAGCTaGAAGCCTCAGCCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: SLERLCFAHLCRVELSDAFAASS*KPQPGA
Trigger: TGCTCCTGGCTGAGGCTTTCAGCTTGAAGCAGCAAA...GGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCTCTTCCTGGTCCTTaGCCTTGGCCTCCAAGTCCC +
Preference number: 4 (lower is better)
Translates to: RKPRCFPCRSAVRWGQWCPLPGP*PWPPSP
Trigger: GGGACTTGGAGGCCAAGGTCAAGGACCAGGAAGAGG...GCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGTGTTTTAACTTCTTCTaGCATGACTGCCGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: RLCFAHLCRVELSDAHSLCFNFF*HDCRAS
Trigger: AGAGGCCCGGCAGTCATGTCAGAAGAAGTTAAAACA...CAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp TCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCTTAAGTGGTCCAGCATaGTCTGGGCATCTGCCAGCA +
Preference number: 4 (lower is better)
Translates to: SLERLCFAHLCRVELSDALSGPA*SGHLPA
Trigger: TGCTGGCAGATGCCCAGATCATGCTGGACCACTTAA...GGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp TGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGTTAAGTGGTCCAGCATaGTCTGGGCATCTGCCAGCA +
Preference number: 4 (lower is better)
Translates to: CRVELSDAHSLESPPDRKLSGPA*SGHLPA
Trigger: TGCTGGCAGATGCCCAGATCATGCTGGACCACTTAA...CTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp TTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCATTAAGTGGTCCAGCATaGTCTGGGCATCTGCCAGCA +
Preference number: 4 (lower is better)
Translates to: FGETLLRPPLPRGAVRRPLSGPA*SGHLPA
Trigger: TGCTGGCAGATGCCCAGATCATGCTGGACCACTTAA...TGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACTCTTCCAGCCGGTTTTaGATCTCGTTTTTCTCACGC +
Preference number: 4 (lower is better)
Translates to: HLCRVELSDAHSLESPPDSSSRF*ISFFSR
Trigger: GCGTGAGAAAAACGAGATTCAAAACCGGCTGGAAGA...GTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCTCTTCCAGCCGGTTTTaGATCTCGTTTTTCTCACGC +
Preference number: 4 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSSSSRF*ISFFSR
Trigger: GCGTGAGAAAAACGAGATTCAAAACCGGCTGGAAGA...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCTCGCTTCCTGCCTGCTaGCGAGGGACTTGTCCACCA +
Preference number: 4 (lower is better)
Translates to: RKPRCFPCRSAVRWGQWCSLPAC*RGTCPP
Trigger: TGGTGGACAAGTCCCTCGTCAGCAGGCAGGAAGCGA...GCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGTCGCTTCCTGCCTGCTaGCGAGGGACTTGTCCACCA +
Preference number: 4 (lower is better)
Translates to: QKAKVFSMQIGSQVGAVVSLPAC*RGTCPP
Trigger: TGGTGGACAAGTCCCTCGTCAGCAGGCAGGAAGCGA...CACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGGTGTCTCCAGCTCCCTaGTCTTCGCTTCCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: QKAKVFSMQIGSQVGAVVVSPAP*SSLPAC
Trigger: GCAGGCAGGAAGCGAAGATCAGGGAGCTGGAGACAC...CACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AGGCAGGCAGAGCTGGAAGCCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTTCTCCATGGTTTCTTTaGGCCGACTGGCCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: RQAELEAAGGCRWKRSALSPWFL*ADWPGS
Trigger: AGAACCTGGCCAGTCGGCTCAAAGAAACCATGGAGA...AAGAGCTGATCTCTTCCACCTGCACCCACCCGCGGCTTCCAGCTCTGCCTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp TTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCATCTCCATGGTTTCTTTaGGCCGACTGGCCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: FGETLLRPPLPRGAVRRPSPWFL*ADWPGS
Trigger: AGAACCTGGCCAGTCGGCTCAAAGAAACCATGGAGA...TGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCTTGACAACCAGGACTTaGCCCCGTCGACCCGGTCCT +
Preference number: 4 (lower is better)
Translates to: RKPRCFPCRSAVRWGQWCLTTRT*PRRPGP
Trigger: AGGACCGGGTCGACGGGGTCAAGTCCTGGTTGTCAA...GCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCAGGTCCCTTGTTCTTTaGCAACCAGGACTTGACCCC +
Preference number: 4 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRRSLVL*QPGLDP
Trigger: GGGGTCAAGTCCTGGTTGTCAAAGAACAAGGGACCT...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp TCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGGTCCCTTGTTCTTTaGCAACCAGGACTTGACCCC +
Preference number: 4 (lower is better)
Translates to: SAAWSCQTPTAWKVPLTERSLVL*QPGLDP
Trigger: GGGGTCAAGTCCTGGTTGTCAAAGAACAAGGGACCT...TTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp GATAGCTGTGGGAGAACCGGGGTCTGGAGATGCTGTCCACAGGATCATGCTCATGCTCACTCAGGGTGGTaGGGAGCGAGTCCTGGTCTC +
Preference number: 4 (lower is better)
Translates to: DSCGRTGVWRCCPQDHAHAHSGW*GASPGL
Trigger: GAGACCAGGACTCGCTCCTCACCACCCTGAGTGAGC...ATGAGCATGATCCTGTGGACAGCATCTCCAGACCCCGGTTCTCCCACAGCTATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS-3UTR GCA 90 bp CTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACCACTGGAGCTGGCTGTaGTTAGGTGTCCTGAGTCCA +
Preference number: 4 (lower is better)
Translates to: LSLERLCFAHLCRVELSDHWSWL*LGVLSP
Trigger: TGGACTCAGGACACCTAAGCACAGCCAGCTCCAGTG...GTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR GCA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCATGCCTAGCCCAGGATaGTGCATTAGCTGTCCCTCA +
Preference number: 4 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRMPSPG*CISCPS
Trigger: TGAGGGACAGCTAATGCAGCATCCTGGGCTAGGCAT...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR GCA 90 bp ACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAACACTGTCCCCAGACTaGCGGATCATCTCCACAATT +
Preference number: 4 (lower is better)
Translates to: TSAAWSCQTPTAWKVPLTTLSPD*RIISTI
Trigger: AATTGTGGAGATGATCCGGCAGTCTGGGGACAGTGT...TGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR GCA 90 bp CTCCCCACCCTGCCTCCAAAGAACCAGGGCCCCGGCTCTGCTAACCGCTGTCCCCACCCCTTGAACATGTaGATCACCTTCTCTGAATAC +
Preference number: 4 (lower is better)
Translates to: LPTLPPKNQGPGSANRCPHPLNM*ITFSEY
Trigger: GTATTCAGAGAAGGTGATGCACATGTTCAAGGGGTG...GGGACAGCGGTTAGCAGAGCCGGGGCCCTGGTTCTTTGGAGGCAGGGTGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGCAGGAGGCTGAGATGGAGGTCCACCACCGGCTCCATGGAATGCCAGGCCACCCAACATCGCCCTATATaGAGTCTGGGCTACAGCGTA +
Preference number: 4 (lower is better)
Translates to: SRRLRWRSTTGSMECQATQHRPI*SLGYSV
Trigger: TACGCTGTAGCCCAGACTGCATATAGGGCGATGTTG...GGTGGCCTGGCATTCCATGGAGCCGGTGGTGGACCTCCATCTCAGCCTCCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCCAACATCGCCCTATATaGAGTCTGGGCTACAGCGTA +
Preference number: 4 (lower is better)
Translates to: LWRDSASPTSAAWSCQTPQHRPI*SLGYSV
Trigger: TACGCTGTAGCCCAGACTGCATATAGGGCGATGTTG...GGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGACTTACTGAACTGCTGTaGAGCCTTCTGCTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: LCRVELSDAHSLESPPDRLTELL*SLLLLL
Trigger: GAGGAGAAGCAGAAGGCTGCACAGCAGTTCAGTAAG...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACCTTACTGAACTGCTGTaGAGCCTTCTGCTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: LERLCFAHLCRVELSDAHLTELL*SLLLLL
Trigger: GAGGAGAAGCAGAAGGCTGCACAGCAGTTCAGTAAG...GTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCTGGAGCTTACTGAACTaGTGTGCAGCCTTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: AAWSCQTPTAWKVPLTESWSLLN*CAAFCF
Trigger: GAAGCAGAAGGCTGCACAGCAGTTCAGTAAGCTCCA...GCTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGATGGAGCTTACTGAACTaGTGTGCAGCCTTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: LCRVELSDAHSLESPPDRWSLLN*CAAFCF
Trigger: GAAGCAGAAGGCTGCACAGCAGTTCAGTAAGCTCCA...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCATGGACCGTTGCAGGGTaGCTCCTTTTAGCTGGTGTT +
Preference number: 4 (lower is better)
Translates to: FGETLLRPPLPRGAVRRPWTVAG*LLLAGV
Trigger: AACACCAGCTAAAAGGAGGCACCCTGCAACGGTCCA...TGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGTGGACCGTTGCAGGGTaGCTCCTTTTAGCTGGTGTT +
Preference number: 4 (lower is better)
Translates to: CRVELSDAHSLESPPDRKWTVAG*LLLAGV
Trigger: AACACCAGCTAAAAGGAGGCACCCTGCAACGGTCCA...CTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGAAAGGAGGTGGACCGTTaGAGGGTGCCTCCTTTTAGC +
Preference number: 4 (lower is better)
Translates to: ALFGETLLRPPLPRGAVRKEVDR*RVPPFS
Trigger: GCTAAAAGGAGGCACCCTGCAACGGTCCACCTCCTT...TCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCATGAGGGCATCTACTTaGAGCTTAATCTGTATGCAC +
Preference number: 4 (lower is better)
Translates to: RPPLPRGAVRRPQPGKSPMRAST*SLICMH
Trigger: GTGCATACAGATTAAGCTGCAAGTAGATGCCCTCAT...GGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGACAGGAAGGAAGCAGTaGACGAAATGCATCTTGGAC +
Preference number: 4 (lower is better)
Translates to: RLCFAHLCRVELSDAHSLTGRKQ*TKCILD
Trigger: GTCCAAGATGCATTTCGTGCACTGCTTCCTTCCTGT...CAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCAACCTTGGCGGTACATaGGCATCGCATCAAGCAGGC +
Preference number: 4 (lower is better)
Translates to: KPRCFPCRSAVRWGQWCPNLGGT*ASHQAG
Trigger: GCCTGCTTGATGCGATGCGCATGTACCGCCAAGGTT...GGGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGAAACCTTGGCGGTACATaGGCATCGCATCAAGCAGGC +
Preference number: 4 (lower is better)
Translates to: ALFGETLLRPPLPRGAVRNLGGT*ASHQAG
Trigger: GCCTGCTTGATGCGATGCGCATGTACCGCCAAGGTT...TCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCGGCCCAGACAGCAGCTaGTCTTTTCCAGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: RKPRCFPCRSAVRWGQWCGPDSS*SFPGPG
Trigger: CCCTGGACCTGGAAAAGAGCAGCTGCTGTCTGGGCC...GCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCTTCTTGATGTTCTTCTaGACACAGCGAATGGCCAGG +
Preference number: 4 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSFLMFF*TQRMAR
Trigger: CCTGGCCATTCGCTGTGTGCAGAAGAACATCAAGAA...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCAGCTTGCTGCGCAGCTaGTGGATCTCCTCGTCTTTG +
Preference number: 4 (lower is better)
Translates to: KPRCFPCRSAVRWGQWCPSLLRS*WISSSL
Trigger: CAAAGACGAGGAGATCCAGCAGCTGCGCAGCAAGCT...GGGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGAGCTTGCTGCGCAGCTaGTGGATCTCCTCGTCTTTG +
Preference number: 4 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQSLLRS*WISSSL
Trigger: CAAAGACGAGGAGATCCAGCAGCTGCGCAGCAAGCT...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACCTTCTCAAGCTTGCTaGGCAGCTGCTGGATCTCCT +
Preference number: 4 (lower is better)
Translates to: ALFGETLLRPPLPRGAVRPSQAC*AAAGSP
Trigger: AGGAGATCCAGCAGCTGCGCAGCAAGCTTGAGAAGG...TCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACCCTTCTCAAGCTTGCTaGGCAGCTGCTGGATCTCCT +
Preference number: 4 (lower is better)
Translates to: LSLERLCFAHLCRVELSDPSQAC*AAAGSP
Trigger: AGGAGATCCAGCAGCTGCGCAGCAAGCTTGAGAAGG...GTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGCCACCTTCTCAAGCTTaGTGCGCAGCTGCTGGATCT +
Preference number: 4 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQPPSQA*CAAAGS
Trigger: AGATCCAGCAGCTGCGCAGCAAGCTTGAGAAGGTGG...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCTCCATCACCTCCATCTaGTTCTTCAGTGCGTCATAC +
Preference number: 4 (lower is better)
Translates to: ASPTSAAWSCQTPTAWKVSITSI*FFSASY
Trigger: GTATGACGCACTGAAGAAGCAGATGGAGGTGATGGA...GACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACTCCATCACCTCCATCTaGTTCTTCAGTGCGTCATAC +
Preference number: 4 (lower is better)
Translates to: HLCRVELSDAHSLESPPDSITSI*FFSASY
Trigger: GTATGACGCACTGAAGAAGCAGATGGAGGTGATGGA...GTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCTTCTCCAGCTGCCTCCTaGTCTGCTGTTCCACCTCCA +
Preference number: 4 (lower is better)
Translates to: AMAEGKGDGKQVQHQVLPSPAAS*SAVPPP
Trigger: TGGAGGTGGAACAGCAGAGCAGGAGGCAGCTGGAGA...AGGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCTCTCCAGCTGCCTCCTaGTCTGCTGTTCCACCTCCA +
Preference number: 4 (lower is better)
Translates to: KAKVFSMQIGSQVGAVVPSPAAS*SAVPPP
Trigger: TGGAGGTGGAACAGCAGAGCAGGAGGCAGCTGGAGA...GGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp ACAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTAGCCGCCTCTCCAGCTaGCTCCTGCTCTGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: TESQGVFHADRQSGGGSGSRLSS*LLLCCS
Trigger: GGAACAGCAGAGCAGGAGGCAGCTGGAGAGGCGGCT...ACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCACTCTCATCACTATCTaGTTGCAGGTCCCCAAGCCG +
Preference number: 4 (lower is better)
Translates to: SLERLCFAHLCRVELSDATLITI*LQVPKP
Trigger: CGGCTTGGGGACCTGCAAGCAGATAGTGATGAGAGT...GGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCCTGTCGAACCTCCTCTaGTTCTTCTCCAGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: KPRCFPCRSAVRWGQWCPLSNLL*FFSSSW
Trigger: CCACGAGCTGGAGAAGAAGCAGAGGAGGTTCGACAG...GGGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCTGGAGTTTCTCCCTCTaGAGCTTCTCCCGCTGCGTC +
Preference number: 4 (lower is better)
Translates to: KAKVFSMQIGSQVGAVVPWSFSL*SFSRCV
Trigger: GACGCAGCGGGAGAAGCTGCAGAGGGAGAAACTCCA...GGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTTTTCCTCCATTTGCTaGTTCAAGCTGAAAGCCTCA +
Preference number: 4 (lower is better)
Translates to: RPPLPRGAVRRPQPGKSPFSSIC*FKLKAS
Trigger: TGAGGCTTTCAGCTTGAAGCAGCAAATGGAGGAAAA...GGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCTCCAAGTCCCGGAGCTaGTTCTTGACCTTGGCCAGA +
Preference number: 4 (lower is better)
Translates to: KPRCFPCRSAVRWGQWCPSKSRS*FLTLAR
Trigger: TCTGGCCAAGGTCAAGAAGCAGCTCCGGGACTTGGA...GGGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGACGCAGCTTGGCCTaGTCCAGCATCTGTATACTC +
Preference number: 4 (lower is better)
Translates to: SAAWSCQTPTAWKVPLTERRSLA*SSICIL
Trigger: GAGTATACAGATGCTGGAGCAGGCCAAGCTGCGTCT...TTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGAGACGCAGCTTGGCCTaGTCCAGCATCTGTATACTC +
Preference number: 4 (lower is better)
Translates to: CRVELSDAHSLESPPDRKRRSLA*SSICIL
Trigger: GAGTATACAGATGCTGGAGCAGGCCAAGCTGCGTCT...CTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGGCAGGCAGAGCTGGAAGCCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTAGACGCAGCTTGGCCTaGTCCAGCATCTGTATACTC +
Preference number: 4 (lower is better)
Translates to: RQAELEAAGGCRWKRSALRRSLA*SSICIL
Trigger: GAGTATACAGATGCTGGAGCAGGCCAAGCTGCGTCT...AAGAGCTGATCTCTTCCACCTGCACCCACCCGCGGCTTCCAGCTCTGCCTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGTACTCCTCCTCGAGCTaGACTTCCATCTGTTTTAAC +
Preference number: 4 (lower is better)
Translates to: PTSAAWSCQTPTAWKVPLYSSSS*TSICFN
Trigger: GTTAAAACAGATGGAAGTGCAGCTCGAGGAGGAGTA...CAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCTGGAGAAGTGAAGATGGAGGGGAGATTCCCAAGGCATCCCACAGGCCCCAGCATGATCTGGGCATCTaGCAGCAGCGCTTTGGTGCG +
Preference number: 4 (lower is better)
Translates to: LWRSEDGGEIPKASHRPQHDLGI*QQRFGA
Trigger: CGCACCAAAGCGCTGCTGGCAGATGCCCAGATCATG...CTGGGGCCTGTGGGATGCCTTGGGAATCTCCCCTCCATCTTCACTTCTCCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCATGATCTGGGCATCTaGCAGCAGCGCTTTGGTGCG +
Preference number: 4 (lower is better)
Translates to: KAKVFSMQIGSQVGAVVPHDLGI*QQRFGA
Trigger: CGCACCAAAGCGCTGCTGGCAGATGCCCAGATCATG...GGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCTGCCTTTACAGCTGCTaGACAGGTGAATTCCGACTC +
Preference number: 4 (lower is better)
Translates to: AAWSCQTPTAWKVPLTESCLYSC*TGEFRL
Trigger: GAGTCGGAATTCACCTGTGCAGCAGCTGTAAAGGCA...GCTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGATGCCTTTACAGCTGCTaGACAGGTGAATTCCGACTC +
Preference number: 4 (lower is better)
Translates to: LCRVELSDAHSLESPPDRCLYSC*TGEFRL
Trigger: GAGTCGGAATTCACCTGTGCAGCAGCTGTAAAGGCA...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCTGCCTTTACAGCTGCTaGACAGGTGAATTCCGACTC +
Preference number: 4 (lower is better)
Translates to: LWRDSASPTSAAWSCQTPCLYSC*TGEFRL
Trigger: GAGTCGGAATTCACCTGTGCAGCAGCTGTAAAGGCA...GGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCTCATCAATCTGCAGGTaGAGGTCTTCCATCTCCACC +
Preference number: 4 (lower is better)
Translates to: LWRDSASPTSAAWSCQTPSSICR*RSSIST
Trigger: GGTGGAGATGGAAGACCTGCACCTGCAGATTGATGA...GGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGATCATCAATCTGCAGGTaGAGGTCTTCCATCTCCACC +
Preference number: 4 (lower is better)
Translates to: LCRVELSDAHSLESPPDRSSICR*RSSIST
Trigger: GGTGGAGATGGAAGACCTGCACCTGCAGATTGATGA...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCGCGATGTCATCAATCTaGAGGTGCAGGTCTTCCATC +
Preference number: 4 (lower is better)
Translates to: LWRDSASPTSAAWSCQTPAMSSI*RCRSSI
Trigger: GATGGAAGACCTGCACCTGCAGATTGATGACATCGC...GGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAGCGATGTCATCAATCTaGAGGTGCAGGTCTTCCATC +
Preference number: 4 (lower is better)
Translates to: LCRVELSDAHSLESPPDRAMSSI*RCRSSI
Trigger: GATGGAAGACCTGCACCTGCAGATTGATGACATCGC...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACGCGATGTCATCAATCTaGAGGTGCAGGTCTTCCATC +
Preference number: 4 (lower is better)
Translates to: LERLCFAHLCRVELSDAHAMSSI*RCRSSI
Trigger: GATGGAAGACCTGCACCTGCAGATTGATGACATCGC...GTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAGCCACAGCTGCCTTGTaGTTCTTCATCAGCTCATTC +
Preference number: 4 (lower is better)
Translates to: LCRVELSDAHSLESPPDRATAAL*FFISSF
Trigger: GAATGAGCTGATGAAGAAGCACAAGGCAGCTGTGGC...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCGCCACAGCTGCCTTGTaGTTCTTCATCAGCTCATTC +
Preference number: 4 (lower is better)
Translates to: AAWSCQTPTAWKVPLTESATAAL*FFISSF
Trigger: GAATGAGCTGATGAAGAAGCACAAGGCAGCTGTGGC...GCTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCGGCCTGGGCCACAGCTaGCTTGTGCTTCTTCATCAG +
Preference number: 4 (lower is better)
Translates to: KAKVFSMQIGSQVGAVVPGLGHS*LVLLHQ
Trigger: CTGATGAAGAAGCACAAGGCAGCTGTGGCCCAGGCC...GGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGGCAGGCAGAGCTGGAAGCCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTAACTCCACCTGGCTCTaGAGAGCTTGTAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: RQAELEAAGGCRWKRSALNSTWL*RACSFS
Trigger: GGAGAAGCTACAAGCTCTGCAGAGCCAGGTGGAGTT...AAGAGCTGATCTCTTCCACCTGCACCCACCCGCGGCTTCCAGCTCTGCCTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAACTCCACCTGGCTCTaGAGAGCTTGTAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: SAAWSCQTPTAWKVPLTENSTWL*RACSFS
Trigger: GGAGAAGCTACAAGCTCTGCAGAGCCAGGTGGAGTT...TTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCATCCATCTCCAGTTCATaGTTCTTGCGGCTAGCCTCG +
Preference number: 4 (lower is better)
Translates to: FGETLLRPPLPRGAVRRPSISSS*FLRLAS
Trigger: CGAGGCTAGCCGCAAGAAGCATGAACTGGAGATGGA...TGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGTCCATCTCCAGTTCATaGTTCTTGCGGCTAGCCTCG +
Preference number: 4 (lower is better)
Translates to: CRVELSDAHSLESPPDRKSISSS*FLRLAS
Trigger: CGAGGCTAGCCGCAAGAAGCATGAACTGGAGATGGA...CTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp ACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAAGCTTTAGGTCGGCTTaGAGGCTTTGGTTAGCAGCT +
Preference number: 4 (lower is better)
Translates to: TSAAWSCQTPTAWKVPLTSFRSA*RLWLAA
Trigger: AGCTGCTAACCAAAGCCTGCAAGCCGACCTAAAGCT...TGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCAGCTTTAGGTCGGCTTaGAGGCTTTGGTTAGCAGCT +
Preference number: 4 (lower is better)
Translates to: LWRDSASPTSAAWSCQTPSFRSA*RLWLAA
Trigger: AGCTGCTAACCAAAGCCTGCAAGCCGACCTAAAGCT...GGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCTTTAGGTCGGCTTaGAGGCTTTGGTTAGCAGCT +
Preference number: 4 (lower is better)
Translates to: LERLCFAHLCRVELSDAHSFRSA*RLWLAA
Trigger: AGCTGCTAACCAAAGCCTGCAAGCCGACCTAAAGCT...GTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTAGCTTTAGGTCGGCTTaGAGGCTTTGGTTAGCAGCT +
Preference number: 4 (lower is better)
Translates to: CFAHLCRVELSDAHSLESSFRSA*RLWLAA
Trigger: AGCTGCTAACCAAAGCCTGCAAGCCGACCTAAAGCT...ACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGATCCTCAATGGCAGCTTaGAAGTCCCCAATGCGTTTG +
Preference number: 4 (lower is better)
Translates to: LCRVELSDAHSLESPPDRSSMAA*KSPMRL
Trigger: CAAACGCATTGGGGACTTGCAAGCTGCCATTGAGGA...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp ACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACATCCTCAATGGCAGCTTaGAAGTCCCCAATGCGTTTG +
Preference number: 4 (lower is better)
Translates to: TSAAWSCQTPTAWKVPLTSSMAA*KSPMRL
Trigger: CAAACGCATTGGGGACTTGCAAGCTGCCATTGAGGA...TGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGCAGGAGGCTGAGATGGAGGTCCACCACCGGCTCCATGGAATGCCAGGCCACCGCCATCGTCAGAAGGTaGCTTAGAAGGTCCCTTGTT +
Preference number: 4 (lower is better)
Translates to: SRRLRWRSTTGSMECQATAIVRR*LRRSLV
Trigger: AACAAGGGACCTTCTAAGGCACCTTCTGACGATGGC...GGTGGCCTGGCATTCCATGGAGCCGGTGGTGGACCTCCATCTCAGCCTCCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000135375.4
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTGCCATCGTCAGAAGGTaGCTTAGAAGGTCCCTTGTT +
Preference number: 4 (lower is better)
Translates to: CFAHLCRVELSDAHSLESAIVRR*LRRSLV
Trigger: AACAAGGGACCTTCTAAGGCACCTTCTGACGATGGC...ACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCGCCATCGTCAGAAGGTaGCTTAGAAGGTCCCTTGTT +
Preference number: 4 (lower is better)
Translates to: AAWSCQTPTAWKVPLTESAIVRR*LRRSLV
Trigger: AACAAGGGACCTTCTAAGGCACCTTCTGACGATGGC...GCTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGCAGGAGGCTGAGATGGAGGTCCACCACCGGCTCCATGGAATGCCAGGCCACCTCTGAGAGTTCTGCTTaGCCAGTGAACCGAACTTGG +
Preference number: 4 (lower is better)
Translates to: SRRLRWRSTTGSMECQATSESSA*PVNRTW
Trigger: CCAAGTTCGGTTCACTGGCCAAGCAGAACTCTCAGA...GGTGGCCTGGCATTCCATGGAGCCGGTGGTGGACCTCCATCTCAGCCTCCTGCT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CCA 90 bp GAGTACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGAGAGCAGGAGGTGGTaGTGGCACCAGAGCGGGAAG +
Preference number: 4 (lower is better)
Translates to: EYKAMAEGKGDGKQVQHQESRRW*WHQSGK
Trigger: CTTCCCGCTCTGGTGCCACCACCACCTCCTGCTCTC...CTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGTACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
CDS-3UTR CCA 90 bp AGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGAGCCAAAGTCTCCTGTaGGTCTTCGTTGTAACTCCA +
Preference number: 4 (lower is better)
Translates to: RLCFAHLCRVELSDAHSLSQSLL*VFVVTP
Trigger: TGGAGTTACAACGAAGACCCACAGGAGACTTTGGCT...CAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CCA 90 bp CCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTAAATAACTGCTCATTGCACCCAAGGCCAGGTCCTTaGTGCCTGCCCCTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: PRVGAGGRDQLLNNCSLHPRPGP*CLPLAQ
Trigger: CTGAGCCAGGGGCAGGCACCAAGGACCTGGCCTTGG...GTGCAATGAGCAGTTATTTAAGAGCTGATCTCTTCCACCTGCACCCACCCGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
CDS-3UTR CCA 90 bp AGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCAGGATGGCTCCGTCATaGTCCAGCTTCACACGCGCC +
Preference number: 4 (lower is better)
Translates to: RKPRCFPCRSAVRWGQWCRMAPS*SSFTRA
Trigger: GGCGCGTGTGAAGCTGGACCATGACGGAGCCATCCT...GCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTTACCCAGAAGGACAATaGACTGGTCCTGACGACTCA +
Preference number: 4 (lower is better)
Translates to: CFAHLCRVELSDAHSLESYPEGQ*TGPDDS
Trigger: TGAGTCGTCAGGACCAGTCCATTGTCCTTCTGGGTA...ACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCGCCAAGTGGTTCAGGTaGAGCTCTGTCCTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: KAKVFSMQIGSQVGAVVPAKWFR*SSVLRV
Trigger: CACCCTCAGGACAGAGCTCCACCTGAACCACTTGGC...GGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGAAGTGAAGATGGAGGGGAGATTCCCAAGGCATCCCACAGGCCCCAGCTGCAGGCCAAGTGGTTCAGGTaGAGCTCTGTCCTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: RSEDGGEIPKASHRPQLQAKWFR*SSVLRV
Trigger: CACCCTCAGGACAGAGCTCCACCTGAACCACTTGGC...CTGCAGCTGGGGCCTGTGGGATGCCTTGGGAATCTCCCCTCCATCTTCACTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp ACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAACCTTCATGGCAGCCTaGAGCTTACTGAACTGCTGT +
Preference number: 4 (lower is better)
Translates to: TSAAWSCQTPTAWKVPLTTFMAA*SLLNCC
Trigger: ACAGCAGTTCAGTAAGCTCCAGGCTGCCATGAAGGT...TGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACACCTTCATGGCAGCCTaGAGCTTACTGAACTGCTGT +
Preference number: 4 (lower is better)
Translates to: LERLCFAHLCRVELSDAHTFMAA*SLLNCC
Trigger: ACAGCAGTTCAGTAAGCTCCAGGCTGCCATGAAGGT...GTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTACCTTCATGGCAGCCTaGAGCTTACTGAACTGCTGT +
Preference number: 4 (lower is better)
Translates to: CFAHLCRVELSDAHSLESTFMAA*SLLNCC
Trigger: ACAGCAGTTCAGTAAGCTCCAGGCTGCCATGAAGGT...ACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCGTTCCTCGGGGGAGATaGCCAGCACCTTCATGGCAG +
Preference number: 4 (lower is better)
Translates to: RKPRCFPCRSAVRWGQWCVPRGR*PAPSWQ
Trigger: CTGCCATGAAGGTGCTGGCCATCTCCCCCGAGGAAC...GCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCTTCTGGGCCCATTCGTaGCGGGCAAACTGCTTTCGT +
Preference number: 4 (lower is better)
Translates to: KPRCFPCRSAVRWGQWCPFWAHS*RANCFR
Trigger: ACGAAAGCAGTTTGCCCGCCACGAATGGGCCCAGAA...GGGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGTTCTGGGCCCATTCGTaGCGGGCAAACTGCTTTCGT +
Preference number: 4 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQFWAHS*RANCFR
Trigger: ACGAAAGCAGTTTGCCCGCCACGAATGGGCCCAGAA...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGAGGTATGCTGCCTTCTaGGCCCATTCGTGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: QKAKVFSMQIGSQVGAVVRYAAF*AHSWRA
Trigger: TGCCCGCCACGAATGGGCCCAGAAGGCAGCATACCT...CACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACGTGCCTCCTTTTAGCTaGTGTTTGAAGATAGCCGAG +
Preference number: 4 (lower is better)
Translates to: HLCRVELSDAHSLESPPDVPPFS*CLKIAE
Trigger: CTCGGCTATCTTCAAACACCAGCTAAAAGGAGGCAC...GTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp ACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACCCTGACGGAAGGAGGTaGACCGTTGCAGGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: TKQWQKGRGMANRSSTRYPDGRR*TVAGCL
Trigger: GAGGCACCCTGCAACGGTCCACCTCCTTCCGTCAGG...GTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GAGTACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGCCTGACGGAAGGAGGTaGACCGTTGCAGGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: EYKAMAEGKGDGKQVQHQPDGRR*TVAGCL
Trigger: GAGGCACCCTGCAACGGTCCACCTCCTTCCGTCAGG...CTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGTACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp ACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACCCAGAGCACTCAGTTTaGTGCCCTCTCCCAGGCCGC +
Preference number: 4 (lower is better)
Translates to: TKQWQKGRGMANRSSTRYPEHSV*CPLPGR
Trigger: GCGGCCTGGGAGAGGGCACCAAACTGAGTGCTCTGG...GTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp ACAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTCCAGAGCACTCAGTTTaGTGCCCTCTCCCAGGCCGC +
Preference number: 4 (lower is better)
Translates to: TESQGVFHADRQSGGGSGPEHSV*CPLPGR
Trigger: GCGGCCTGGGAGAGGGCACCAAACTGAGTGCTCTGG...ACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCGAACAGAGTGAGTGCTaGCTGGACTTGAGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: KPRCFPCRSAVRWGQWCPEQSEC*LDLRAL
Trigger: CAGGGCTCTCAAGTCCAGCCAGCACTCACTCTGTTC...GGGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCTCCCCATTCAGGGTTCTaGAAGCCTGGTGTGTCCACG +
Preference number: 4 (lower is better)
Translates to: AMAEGKGDGKQVQHQVLPPHSGF*KPGVST
Trigger: CGTGGACACACCAGGCTTCCAGAACCCTGAATGGGG...AGGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGAGGAAGGTGCGCTCGTaGAACAGCCTCTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: QKAKVFSMQIGSQVGAVVRKVRS*NSLCSL
Trigger: CAGGCTGCAGAGGCTGTTCCACGAGCGCACCTTCCT...CACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp ACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGGAGTCATCTGCAACTaGCTCCAAGTCATCAAACGC +
Preference number: 4 (lower is better)
Translates to: TSAAWSCQTPTAWKVPLTGVICN*LQVIKR
Trigger: GCGTTTGATGACTTGGAGCCAGTTGCAGATGACTCC...TGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACGGAGTCATCTGCAACTaGCTCCAAGTCATCAAACGC +
Preference number: 4 (lower is better)
Translates to: LERLCFAHLCRVELSDAHGVICN*LQVIKR
Trigger: GCGTTTGATGACTTGGAGCCAGTTGCAGATGACTCC...GTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTGGAGTCATCTGCAACTaGCTCCAAGTCATCAAACGC +
Preference number: 4 (lower is better)
Translates to: CFAHLCRVELSDAHSLESGVICN*LQVIKR
Trigger: GCGTTTGATGACTTGGAGCCAGTTGCAGATGACTCC...ACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GAGTACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGACCAGGTGGGAAGCCTaGTCCACAGCAGCCACGGAG +
Preference number: 4 (lower is better)
Translates to: EYKAMAEGKGDGKQVQHQTRWEA*STAATE
Trigger: CTCCGTGGCTGCTGTGGACCAGGCTTCCCACCTGGT...CTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGTACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp ACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACACCAGGTGGGAAGCCTaGTCCACAGCAGCCACGGAG +
Preference number: 4 (lower is better)
Translates to: TKQWQKGRGMANRSSTRYTRWEA*STAATE
Trigger: CTCCGTGGCTGCTGTGGACCAGGCTTCCCACCTGGT...GTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp ACAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTACCAGGTGGGAAGCCTaGTCCACAGCAGCCACGGAG +
Preference number: 4 (lower is better)
Translates to: TESQGVFHADRQSGGGSGTRWEA*STAATE
Trigger: CTCCGTGGCTGCTGTGGACCAGGCTTCCCACCTGGT...ACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCAGTGAGCGAACCAGGTaGGAAGCCTGGTCCACAGCA +
Preference number: 4 (lower is better)
Translates to: SNGRREGGWQTGPAPGTASERTR*EAWSTA
Trigger: TGCTGTGGACCAGGCTTCCCACCTGGTTCGCTCACT...GGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCTTTGGTACCGTGGCTGTaGCCCAGGAGAAAGTGCCGA +
Preference number: 4 (lower is better)
Translates to: AMAEGKGDGKQVQHQVLPLVPWL*PRRKCR
Trigger: TCGGCACTTTCTCCTGGGCCACAGCCACGGTACCAA...AGGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCTGGAGAAGTGAAGATGGAGGGGAGATTCCCAAGGCATCCCACAGGCCCCAGTGTACTCCACCCAGTTaGTACCGTGGCTGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: LWRSEDGGEIPKASHRPQCTPPS*YRGCGP
Trigger: TGGGCCACAGCCACGGTACCAACTGGGTGGAGTACA...CTGGGGCCTGTGGGATGCCTTGGGAATCTCCCCTCCATCTTCACTTCTCCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCATGGCTGGGTTCTGCTTaGTGTAATTCAGCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: FGETLLRPPLPRGAVRRPWLGSA*CNSASQ
Trigger: CTGGCTGGCTGAATTACACCAAGCAGAACCCAGCCA...TGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCTGGGGTGCATTCTGGGTaGCTGGGTTCTGCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: AMAEGKGDGKQVQHQVLPGVHSG*LGSAWC
Trigger: ACACCAAGCAGAACCCAGCCACCCAGAATGCACCCC...AGGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACCTGATGATCTTTTTCTaGGAGTCCTGCAGAAGCCGG +
Preference number: 4 (lower is better)
Translates to: LERLCFAHLCRVELSDAHLMIFF*ESCRSR
Trigger: CCGGCTTCTGCAGGACTCCCAGAAAAAGATCATCAG...GTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAAACACCATGTGGTCTaGGTAACCTTGGCGGTACAT +
Preference number: 4 (lower is better)
Translates to: HLCRVELSDAHSLESPPDKHHVV*VTLAVH
Trigger: ATGTACCGCCAAGGTTACCCAGACCACATGGTGTTT...GTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp ACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACATTTCTTGGTCAGGTGTaGAGCCAGGACATCAAAGCG +
Preference number: 4 (lower is better)
Translates to: TSAAWSCQTPTAWKVPLTFLGQV*SQDIKA
Trigger: CGCTTTGATGTCCTGGCTCCACACCTGACCAAGAAA...TGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAATCTGCACACAGCGAATaGCCAGGTCCTGGATCTTTC +
Preference number: 4 (lower is better)
Translates to: SAAWSCQTPTAWKVPLTESAHSE*PGPGSF
Trigger: GAAAGATCCAGGACCTGGCCATTCGCTGTGTGCAGA...TTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCTCCAGGTGCAGCTTaGTGTCCTGCAGCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: QKAKVFSMQIGSQVGAVVPPGAA*CPAAQL
Trigger: CAGCTGAGCTGCAGGACACCAAGCTGCACCTGGAGG...CACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCTTTCTTCTCCAGCTCGTaGTTTCGGACCTGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: AMAEGKGDGKQVQHQVLPFFSSS*FRTCWP
Trigger: GGGCCAGCAGGTCCGAAACCACGAGCTGGAGAAGAA...AGGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCGTCTCCTCGTGGGCCTaGGAAAGCTCACTGTCGAAC +
Preference number: 4 (lower is better)
Translates to: KAKVFSMQIGSQVGAVVPVSSWA*ESSLSN
Trigger: GTTCGACAGTGAGCTTTCCCAGGCCCACGAGGAGAC...GGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCTGTCTCCTCGTGGGCCTaGGAAAGCTCACTGTCGAAC +
Preference number: 4 (lower is better)
Translates to: AMAEGKGDGKQVQHQVLPVSSWA*ESSLSN
Trigger: GTTCGACAGTGAGCTTTCCCAGGCCCACGAGGAGAC...AGGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGAATGTCCTTCTCCCGCTaGAGTTTCTCCCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: ALFGETLLRPPLPRGAVRMSFSR*SFSLCS
Trigger: GCTGCAGAGGGAGAAACTCCAGCGGGAGAAGGACAT...TCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACATGTCCTTCTCCCGCTaGAGTTTCTCCCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LSLERLCFAHLCRVELSDMSFSR*SFSLCS
Trigger: GCTGCAGAGGGAGAAACTCCAGCGGGAGAAGGACAT...GTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCTCTCCAGACGCAGCTTaGCCTGCTCCAGCATCTGTA +
Preference number: 4 (lower is better)
Translates to: KPRCFPCRSAVRWGQWCPSPDAA*PAPASV
Trigger: TACAGATGCTGGAGCAGGCCAAGCTGCGTCTGGAGA...GGGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGTCCATCTCCTTGGAATaGGTCTGTCTCATTCTCTCC +
Preference number: 4 (lower is better)
Translates to: RLCFAHLCRVELSDAHSLSISLE*VCLILS
Trigger: GGAGAGAATGAGACAGACCCATTCCAAGGAGATGGA...CAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCGACTCTCCATCTCCTTaGAATGGGTCTGTCTCATTC +
Preference number: 4 (lower is better)
Translates to: ASPTSAAWSCQTPTAWKVDSPSP*NGSVSF
Trigger: GAATGAGACAGACCCATTCCAAGGAGATGGAGAGTC...GACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGGATTCAAAGTCCCGCTaGTTCACCTGGTCACTGAGC +
Preference number: 4 (lower is better)
Translates to: CRVELSDAHSLESPPDRKDSKSR*FTWSLS
Trigger: GCTCAGTGACCAGGTGAACCAGCGGGACTTTGAATC...CTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCGATTCAAAGTCCCGCTaGTTCACCTGGTCACTGAGC +
Preference number: 4 (lower is better)
Translates to: SLERLCFAHLCRVELSDADSKSR*FTWSLS
Trigger: GCTCAGTGACCAGGTGAACCAGCGGGACTTTGAATC...GGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCTCCGACTCTTCCAGCTaGTTCTTCAGCTGGGCAATC +
Preference number: 4 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRSDSSS*FFSWAI
Trigger: GATTGCCCAGCTGAAGAACCAGCTGGAAGAGTCGGA...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGTCCGACTCTTCCAGCTaGTTCTTCAGCTGGGCAATC +
Preference number: 4 (lower is better)
Translates to: CRVELSDAHSLESPPDRKSDSSS*FFSWAI
Trigger: GATTGCCCAGCTGAAGAACCAGCTGGAAGAGTCGGA...CTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCATCCGACTCTTCCAGCTaGTTCTTCAGCTGGGCAATC +
Preference number: 4 (lower is better)
Translates to: FGETLLRPPLPRGAVRRPSDSSS*FFSWAI
Trigger: GATTGCCCAGCTGAAGAACCAGCTGGAAGAGTCGGA...TGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTGCGCTGTCTTGGCTTTaGCGATGTCATCAATCTGCA +
Preference number: 4 (lower is better)
Translates to: CFAHLCRVELSDAHSLESALSWL*RCHQSA
Trigger: TGCAGATTGATGACATCGCCAAAGCCAAGACAGCGC...ACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp ACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGCGCTGTCTTGGCTTTaGCGATGTCATCAATCTGCA +
Preference number: 4 (lower is better)
Translates to: TSAAWSCQTPTAWKVPLTALSWL*RCHQSA
Trigger: TGCAGATTGATGACATCGCCAAAGCCAAGACAGCGC...TGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCCTCCAGCGCTGTCTTaGCTTTGGCGATGTCATCAA +
Preference number: 4 (lower is better)
Translates to: CRVELSDAHSLESPPDRKPPALS*LWRCHQ
Trigger: TTGATGACATCGCCAAAGCCAAGACAGCGCTGGAGG...CTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACTCCAGGAACTCCACCTaGCTCTGCAGAGCTTGTAGC +
Preference number: 4 (lower is better)
Translates to: LSLERLCFAHLCRVELSDSRNST*LCRACS
Trigger: GCTACAAGCTCTGCAGAGCCAGGTGGAGTTCCTGGA...GTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCATCCAGGCGCTTCACTTaGGTCTTTTCGAACTCCAGG +
Preference number: 4 (lower is better)
Translates to: FGETLLRPPLPRGAVRRPSRRFT*VFSNSR
Trigger: CCTGGAGTTCGAAAAGACCCAAGTGAAGCGCCTGGA...TGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCTCCAGGCGCTTCACTTaGGTCTTTTCGAACTCCAGG +
Preference number: 4 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRSRRFT*VFSNSR
Trigger: CCTGGAGTTCGAAAAGACCCAAGTGAAGCGCCTGGA...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCTCCAGGCGCTTCACTTaGGTCTTTTCGAACTCCAGG +
Preference number: 4 (lower is better)
Translates to: SLERLCFAHLCRVELSDASRRFT*VFSNSR
Trigger: CCTGGAGTTCGAAAAGACCCAAGTGAAGCGCCTGGA...GGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCTCATCTCCTCCTTaGTGTCACGAAGCTGTCGCT +
Preference number: 4 (lower is better)
Translates to: ALFGETLLRPPLPRGAVRRSSPP*CHEAVA
Trigger: AGCGACAGCTTCGTGACACCAAGGAGGAGATGAGCG...TCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGTCGGCTTGCAGGCTTTaGTTAGCAGCTTCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQSACRL*LAASRL
Trigger: GAGCCTGGAAGCTGCTAACCAAAGCCTGCAAGCCGA...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCATCTCATCCTCAATaGCAGCTTGCAAGTCCCCAA +
Preference number: 4 (lower is better)
Translates to: CFAHLCRVELSDAHSLESPSHPQ*QLASPQ
Trigger: TTGGGGACTTGCAAGCTGCCATTGAGGATGAGATGG...ACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGACCATCTCATCCTCAATaGCAGCTTGCAAGTCCCCAA +
Preference number: 4 (lower is better)
Translates to: LCRVELSDAHSLESPPDRPSHPQ*QLASPQ
Trigger: TTGGGGACTTGCAAGCTGCCATTGAGGATGAGATGG...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGAGTGGCTGGTTGGGCTaGAACTCTTCAAGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: CRVELSDAHSLESPPDRKSGWLG*NSSSCH
Trigger: ATGGCAGCTTGAAGAGTTCCAGCCCAACCAGCCACT...CTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGTGGCTGGTTGGGCTaGAACTCTTCAAGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: SAAWSCQTPTAWKVPLTESGWLG*NSSSCH
Trigger: ATGGCAGCTTGAAGAGTTCCAGCCCAACCAGCCACT...TTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGTGGCTTCCAGTGGCTaGTTGGGCTGGAACTCTTCA +
Preference number: 4 (lower is better)
Translates to: LSLERLCFAHLCRVELSDVASSG*LGWNSS
Trigger: TGAAGAGTTCCAGCCCAACCAGCCACTGGAAGCCAC...GTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GAGTACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGTGGGTCAGGGGCGAGTaGCTTCCAGTGGCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: EYKAMAEGKGDGKQVQHQWVRGE*LPVAGW
Trigger: CCAACCAGCCACTGGAAGCCACTCGCCCCTGACCCA...CTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGTACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGTGGTGGGTTGTCACTaGAGAAAGCAGAGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: LSLERLCFAHLCRVELSDVVGCH*RKQRAP
Trigger: AGGAGCCCTCTGCTTTCTCCAGTGACAACCCACCAC...GTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168348.8
CDS-3UTR TCA 90 bp AGCAGGAGGCTGAGATGGAGGTCCACCACCGGCTCCATGGAATGCCAGGCCACCCGTTTGACAATCATCTaGGAGTTCTGCTTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: SRRLRWRSTTGSMECQATRLTII*EFCLAS
Trigger: ACTGGCCAAGCAGAACTCTCAGATGATTGTCAAACG...GGTGGCCTGGCATTCCATGGAGCCGGTGGTGGACCTCCATCTCAGCCTCCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR TCA 90 bp AGGCAGGCAGAGCTGGAAGCCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTTCATCCCGGCTCCGTTaGGAGAAGGAAAAACGTTTG +
Preference number: 4 (lower is better)
Translates to: RQAELEAAGGCRWKRSALSSRLR*EKEKRL
Trigger: CAAACGTTTTTCCTTCTCTCAACGGAGCCGGGATGA...AAGAGCTGATCTCTTCCACCTGCACCCACCCGCGGCTTCCAGCTCTGCCTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
CDS-3UTR TCA 90 bp TCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAATCATCCCGGCTCCGTTaGGAGAAGGAAAAACGTTTG +
Preference number: 4 (lower is better)
Translates to: SAAWSCQTPTAWKVPLTESSRLR*EKEKRL
Trigger: CAAACGTTTTTCCTTCTCTCAACGGAGCCGGGATGA...TTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR TCA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCTCATCCCGGCTCCGTTaGGAGAAGGAAAAACGTTTG +
Preference number: 4 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRSSRLR*EKEKRL
Trigger: CAAACGTTTTTCCTTCTCTCAACGGAGCCGGGATGA...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR TCA 90 bp TGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGTCATCCCGGCTCCGTTaGGAGAAGGAAAAACGTTTG +
Preference number: 4 (lower is better)
Translates to: CRVELSDAHSLESPPDRKSSRLR*EKEKRL
Trigger: CAAACGTTTTTCCTTCTCTCAACGGAGCCGGGATGA...CTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR TCA 90 bp ACAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTCACCTCTACCTGAGGTaGTGGGGCTGCAGAGTGCTC +
Preference number: 4 (lower is better)
Translates to: TESQGVFHADRQSGGGSGHLYLR*WGCRVL
Trigger: GAGCACTCTGCAGCCCCATCACCTCAGGTAGAGGTG...ACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR TCA 90 bp CAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGGGTTGTGCGCCGCAGTaGGAAGCCAAAGTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: QKAKVFSMQIGSQVGAVVGCAPQ*EAKVSC
Trigger: ACAGGAGACTTTGGCTTCTCACTGCGGCGCACAACC...CACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR TCA 90 bp AGAAGTGAAGATGGAGGGGAGATTCCCAAGGCATCCCACAGGCCCCAGCTGCAGGTGCATCACCTTCTCTaGATACACAGCAGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: RSEDGGEIPKASHRPQLQVHHLL*IHSRSP
Trigger: GGGGCTCCTGCTGTGTATTCAGAGAAGGTGATGCAC...CTGCAGCTGGGGCCTGTGGGATGCCTTGGGAATCTCCCCTCCATCTTCACTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AGGCAGGCAGAGCTGGAAGCCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTTACTGCACCAGATGCTaGAAGCTGGTAGTCTTGCCA +
Preference number: 4 (lower is better)
Translates to: RQAELEAAGGCRWKRSALYCTRC*KLVVLP
Trigger: TGGCAAGACTACCAGCTTTCAGCATCTGGTGCAGTA...AAGAGCTGATCTCTTCCACCTGCACCCACCCGCGGCTTCCAGCTCTGCCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp TGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGTACTGCACCAGATGCTaGAAGCTGGTAGTCTTGCCA +
Preference number: 4 (lower is better)
Translates to: CRVELSDAHSLESPPDRKYCTRC*KLVVLP
Trigger: TGGCAAGACTACCAGCTTTCAGCATCTGGTGCAGTA...CTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCTACTGCACCAGATGCTaGAAGCTGGTAGTCTTGCCA +
Preference number: 4 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRYCTRC*KLVVLP
Trigger: TGGCAAGACTACCAGCTTTCAGCATCTGGTGCAGTA...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AGAAGTGAAGATGGAGGGGAGATTCCCAAGGCATCCCACAGGCCCCAGCTGCAGTGGCACTGCCATTCATaGTGGTGGGGCTGTTCCCAA +
Preference number: 4 (lower is better)
Translates to: RSEDGGEIPKASHRPQLQWHCHS*WWGCSQ
Trigger: TTGGGAACAGCCCCACCATCATGAATGGCAGTGCCA...CTGCAGCTGGGGCCTGTGGGATGCCTTGGGAATCTCCCCTCCATCTTCACTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGAGATGGAAGCCAGGATaGGCCAGCAGGTCTTCTGTT +
Preference number: 4 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQRWKPG*ASRSSV
Trigger: AACAGAAGACCTGCTGGCTCATCCTGGCTTCCATCT...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp GAAGGGGCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCCTCTCCTCAGGGCCCTaGCGGAAGGAGGTGGACCGT +
Preference number: 4 (lower is better)
Translates to: EGAFYFLTSIRSTGRAQPLSSGP*RKEVDR
Trigger: ACGGTCCACCTCCTTCCGTCAGGGCCCTGAGGAGAG...GGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGCCCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCAGTGCTGGCTGGACTTaGGAGCCCTGTTTACCAGGG +
Preference number: 4 (lower is better)
Translates to: RKPRCFPCRSAVRWGQWCSAGWT*EPCLPG
Trigger: CCCTGGTAAACAGGGCTCTCAAGTCCAGCCAGCACT...GCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGCATCATGGAACAGAGTaGGTGCTGGCTGGACTTGAG +
Preference number: 4 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQHHGTE*VLAGLE
Trigger: CTCAAGTCCAGCCAGCACTCACTCTGTTCCATGATG...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCCATCATGGAACAGAGTaGGTGCTGGCTGGACTTGAG +
Preference number: 4 (lower is better)
Translates to: KPRCFPCRSAVRWGQWCPHHGTE*VLAGLE
Trigger: CTCAAGTCCAGCCAGCACTCACTCTGTTCCATGATG...GGGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp GCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACATCATGGAACAGAGTaGGTGCTGGCTGGACTTGAG +
Preference number: 4 (lower is better)
Translates to: ALFGETLLRPPLPRGAVRHHGTE*VLAGLE
Trigger: CTCAAGTCCAGCCAGCACTCACTCTGTTCCATGATG...TCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp ACAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTCGGCCATGCCGGTGGTaGAGGTTTTCCTCATGCTGG +
Preference number: 4 (lower is better)
Translates to: TESQGVFHADRQSGGGSGRPCRW*RFSSCW
Trigger: CCAGCATGAGGAAAACCTTCACCACCGGCATGGCCG...ACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGGGATCTTTCTCTTCTTaGAGTGCTGGCGGGCAAGGT +
Preference number: 4 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQGSFSS*SAGGQG
Trigger: ACCTTGCCCGCCAGCACTTCAAGAAGAGAAAGATCC...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp GCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGAGGATCTTTCTCTTCTTaGAGTGCTGGCGGGCAAGGT +
Preference number: 4 (lower is better)
Translates to: ALFGETLLRPPLPRGAVRGSFSS*SAGGQG
Trigger: ACCTTGCCCGCCAGCACTTCAAGAAGAGAAAGATCC...TCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGGATCTTTCTCTTCTTaGAGTGCTGGCGGGCAAGGT +
Preference number: 4 (lower is better)
Translates to: LSLERLCFAHLCRVELSDGSFSS*SAGGQG
Trigger: ACCTTGCCCGCCAGCACTTCAAGAAGAGAAAGATCC...GTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCTCGGATCTGCTCCTCTaGCAGCTGAACTTGGATGAG +
Preference number: 4 (lower is better)
Translates to: KPRCFPCRSAVRWGQWCPSDLLL*QLNLDE
Trigger: CTCATCCAAGTTCAGCTGTCAGAGGAGCAGATCCGA...GGGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACTCGGATCTGCTCCTCTaGCAGCTGAACTTGGATGAG +
Preference number: 4 (lower is better)
Translates to: LSLERLCFAHLCRVELSDSDLLL*QLNLDE
Trigger: CTCATCCAAGTTCAGCTGTCAGAGGAGCAGATCCGA...GTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp ACAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTCTAGCCGGTCACTGCTaGGTCGGAGCTCGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: TESQGVFHADRQSGGGSGLAGHC*VGARSS
Trigger: AGAGGAACGAGCTCCGACTCAGCAGTGACCGGCTAG...ACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGTGCTGCAGTGCCCGTTaGCTCTCATCACTATCTGCT +
Preference number: 4 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQCCSAR*LSSLSA
Trigger: AGCAGATAGTGATGAGAGTCAACGGGCACTGCAGCA...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp GCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGATGCTGCAGTGCCCGTTaGCTCTCATCACTATCTGCT +
Preference number: 4 (lower is better)
Translates to: ALFGETLLRPPLPRGAVRCCSAR*LSSLSA
Trigger: AGCAGATAGTGATGAGAGTCAACGGGCACTGCAGCA...TCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGTTTGGCACTTCTTCTTaGGCTGCTGCAGTGCCCGTT +
Preference number: 4 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQFGTSS*AAAVPV
Trigger: AACGGGCACTGCAGCAGCTCAAGAAGAAGTGCCAAA...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACTTTGCTGCTTCAAGCTaGAAGCCTCAGCCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: LSLERLCFAHLCRVELSDFAASS*KPQPGA
Trigger: TGCTCCTGGCTGAGGCTTTCAGCTTGAAGCAGCAAA...GTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGATGTTTTAACTTCTTCTaGCATGACTGCCGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: LCRVELSDAHSLESPPDRCFNFF*HDCRAS
Trigger: AGAGGCCCGGCAGTCATGTCAGAAGAAGTTAAAACA...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACTTAAGTGGTCCAGCATaGTCTGGGCATCTGCCAGCA +
Preference number: 4 (lower is better)
Translates to: LSLERLCFAHLCRVELSDLSGPA*SGHLPA
Trigger: TGCTGGCAGATGCCCAGATCATGCTGGACCACTTAA...GTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp TTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACTCTTCCAGCCGGTTTTaGATCTCGTTTTTCTCACGC +
Preference number: 4 (lower is better)
Translates to: LERLCFAHLCRVELSDAHSSSRF*ISFFSR
Trigger: GCGTGAGAAAAACGAGATTCAAAACCGGCTGGAAGA...GTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGATCTTCCAGCCGGTTTTaGATCTCGTTTTTCTCACGC +
Preference number: 4 (lower is better)
Translates to: LCRVELSDAHSLESPPDRSSSRF*ISFFSR
Trigger: GCGTGAGAAAAACGAGATTCAAAACCGGCTGGAAGA...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp ACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTCGCTTCCTGCCTGCTaGCGAGGGACTTGTCCACCA +
Preference number: 4 (lower is better)
Translates to: TKQWQKGRGMANRSSTRYSLPAC*RGTCPP
Trigger: TGGTGGACAAGTCCCTCGTCAGCAGGCAGGAAGCGA...GTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp GAGTACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTGTCTCCAGCTCCCTaGTCTTCGCTTCCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: EYKAMAEGKGDGKQVQHQVSPAP*SSLPAC
Trigger: GCAGGCAGGAAGCGAAGATCAGGGAGCTGGAGACAC...CTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGTACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCTCTCCATGGTTTCTTTaGGCCGACTGGCCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: KPRCFPCRSAVRWGQWCPSPWFL*ADWPGS
Trigger: AGAACCTGGCCAGTCGGCTCAAAGAAACCATGGAGA...GGGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGAGGTCCCTTGTTCTTTaGCAACCAGGACTTGACCCC +
Preference number: 4 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQRSLVL*QPGLDP
Trigger: GGGGTCAAGTCCTGGTTGTCAAAGAACAAGGGACCT...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGAAGTGAAGATGGAGGGGAGATTCCCAAGGCATCCCACAGGCCCCAGCTGCAGAAAAGCCACGGCGCATaGTCATCTCTTCCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: RSEDGGEIPKASHRPQLQKSHGA*SSLPGS
Trigger: GGAGCCTGGAAGAGATGAGCATGCGCCGTGGCTTTT...CTGCAGCTGGGGCCTGTGGGATGCCTTGGGAATCTCCCCTCCATCTTCACTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
CDS-3UTR GCA 90 bp GCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGAATGCCTAGCCCAGGATaGTGCATTAGCTGTCCCTCA +
Preference number: 4 (lower is better)
Translates to: ALFGETLLRPPLPRGAVRMPSPG*CISCPS
Trigger: TGAGGGACAGCTAATGCAGCATCCTGGGCTAGGCAT...TCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR GCA 90 bp AGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCGTCCTGGTCGAGGAATaGCTAGCCCAGGATGCTGCA +
Preference number: 4 (lower is better)
Translates to: RKPRCFPCRSAVRWGQWCVLVEE*LAQDAA
Trigger: TGCAGCATCCTGGGCTAGGCATTCCTCGACCAGGAC...GCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR GCA 90 bp CTCTGGAGAAGTGAAGATGGAGGGGAGATTCCCAAGGCATCCCACAGGCCCCAGGATCCAGCATGGTTGTaGGCCGCAGTGAGAAGCCAA +
Preference number: 4 (lower is better)
Translates to: LWRSEDGGEIPKASHRPQDPAWL*AAVRSQ
Trigger: TTGGCTTCTCACTGCGGCGCACAACCATGCTGGATC...CTGGGGCCTGTGGGATGCCTTGGGAATCTCCCCTCCATCTTCACTTCTCCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
CDS-3UTR GCA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCACACTGTCCCCAGACTaGCGGATCATCTCCACAATT +
Preference number: 4 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRTLSPD*RIISTI
Trigger: AATTGTGGAGATGATCCGGCAGTCTGGGGACAGTGT...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR GCA 90 bp CACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACCACCCCTTGAACATGTaGATCACCTTCTCTGAATAC +
Preference number: 4 (lower is better)
Translates to: HLCRVELSDAHSLESPPDHPLNM*ITFSEY
Trigger: GTATTCAGAGAAGGTGATGCACATGTTCAAGGGGTG...GTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp ACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACAGCGTAGATGTGGGGTaGCATGTCCTCCCGCCGACA +
Preference number: 4 (lower is better)
Translates to: TKQWQKGRGMANRSSTRYSVDVG*HVLPPT
Trigger: TGTCGGCGGGAGGACATGGCACCCCACATCTACGCT...GTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGGCAGGCAGAGCTGGAAGCCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTCAACATCGCCCTATATaGAGTCTGGGCTACAGCGTA +
Preference number: 4 (lower is better)
Translates to: RQAELEAAGGCRWKRSALQHRPI*SLGYSV
Trigger: TACGCTGTAGCCCAGACTGCATATAGGGCGATGTTG...AAGAGCTGATCTCTTCCACCTGCACCCACCCGCGGCTTCCAGCTCTGCCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAACAACATCGCCCTATATaGAGTCTGGGCTACAGCGTA +
Preference number: 4 (lower is better)
Translates to: SAAWSCQTPTAWKVPLTEQHRPI*SLGYSV
Trigger: TACGCTGTAGCCCAGACTGCATATAGGGCGATGTTG...TTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCAACATCGCCCTATATaGAGTCTGGGCTACAGCGTA +
Preference number: 4 (lower is better)
Translates to: CRVELSDAHSLESPPDRKQHRPI*SLGYSV
Trigger: TACGCTGTAGCCCAGACTGCATATAGGGCGATGTTG...CTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGAAGTGAAGATGGAGGGGAGATTCCCAAGGCATCCCACAGGCCCCAGCTGCAGAGGGTGGACAGAGCCTaGCACTTCTCCACTGAGAAC +
Preference number: 4 (lower is better)
Translates to: RSEDGGEIPKASHRPQLQRVDRA*HFSTEN
Trigger: GTTCTCAGTGGAGAAGTGGCAGGCTCTGTCCACCCT...CTGCAGCTGGGGCCTGTGGGATGCCTTGGGAATCTCCCCTCCATCTTCACTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGAAACACATTGTTCTCTaGCAAGTGGTTCAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: RLCFAHLCRVELSDAHSLKHIVL*QVVQVE
Trigger: CTCCACCTGAACCACTTGGCAGAGAACAATGTGTTT...CAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCTTACTGAACTGCTGTaGAGCCTTCTGCTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRLTELL*SLLLLL
Trigger: GAGGAGAAGCAGAAGGCTGCACAGCAGTTCAGTAAG...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCTTACTGAACTGCTGTaGAGCCTTCTGCTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: CRVELSDAHSLESPPDRKLTELL*SLLLLL
Trigger: GAGGAGAAGCAGAAGGCTGCACAGCAGTTCAGTAAG...CTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAACTTACTGAACTGCTGTaGAGCCTTCTGCTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: SAAWSCQTPTAWKVPLTELTELL*SLLLLL
Trigger: GAGGAGAAGCAGAAGGCTGCACAGCAGTTCAGTAAG...TTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGTGGAGCTTACTGAACTaGTGTGCAGCCTTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: CRVELSDAHSLESPPDRKWSLLN*CAAFCF
Trigger: GAAGCAGAAGGCTGCACAGCAGTTCAGTAAGCTCCA...CTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGTGGACCGTTGCAGGGTaGCTCCTTTTAGCTGGTGTT +
Preference number: 4 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQWTVAG*LLLAGV
Trigger: AACACCAGCTAAAAGGAGGCACCCTGCAACGGTCCA...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCTGGACCGTTGCAGGGTaGCTCCTTTTAGCTGGTGTT +
Preference number: 4 (lower is better)
Translates to: KPRCFPCRSAVRWGQWCPWTVAG*LLLAGV
Trigger: AACACCAGCTAAAAGGAGGCACCCTGCAACGGTCCA...GGGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGATGGACCGTTGCAGGGTaGCTCCTTTTAGCTGGTGTT +
Preference number: 4 (lower is better)
Translates to: ALFGETLLRPPLPRGAVRWTVAG*LLLAGV
Trigger: AACACCAGCTAAAAGGAGGCACCCTGCAACGGTCCA...TCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCTAAGGAGGTGGACCGTTaGAGGGTGCCTCCTTTTAGC +
Preference number: 4 (lower is better)
Translates to: AMAEGKGDGKQVQHQVLPKEVDR*RVPPFS
Trigger: GCTAAAAGGAGGCACCCTGCAACGGTCCACCTCCTT...AGGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCCCCACCCTGCCTCCAAAGAACCAGGGCCCCGGCTCTGCTAACCGCTGTCCCATGAGGGCATCTACTTaGAGCTTAATCTGTATGCAC +
Preference number: 4 (lower is better)
Translates to: LPTLPPKNQGPGSANRCPMRAST*SLICMH
Trigger: GTGCATACAGATTAAGCTGCAAGTAGATGCCCTCAT...GGGACAGCGGTTAGCAGAGCCGGGGCCCTGGTTCTTTGGAGGCAGGGTGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGATGAGGGCATCTACTTaGAGCTTAATCTGTATGCAC +
Preference number: 4 (lower is better)
Translates to: PTSAAWSCQTPTAWKVPLMRAST*SLICMH
Trigger: GTGCATACAGATTAAGCTGCAAGTAGATGCCCTCAT...CAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCACAGGAAGGAAGCAGTaGACGAAATGCATCTTGGAC +
Preference number: 4 (lower is better)
Translates to: AAWSCQTPTAWKVPLTESTGRKQ*TKCILD
Trigger: GTCCAAGATGCATTTCGTGCACTGCTTCCTTCCTGT...GCTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACACAGGAAGGAAGCAGTaGACGAAATGCATCTTGGAC +
Preference number: 4 (lower is better)
Translates to: LERLCFAHLCRVELSDAHTGRKQ*TKCILD
Trigger: GTCCAAGATGCATTTCGTGCACTGCTTCCTTCCTGT...GTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTACAGGAAGGAAGCAGTaGACGAAATGCATCTTGGAC +
Preference number: 4 (lower is better)
Translates to: CFAHLCRVELSDAHSLESTGRKQ*TKCILD
Trigger: GTCCAAGATGCATTTCGTGCACTGCTTCCTTCCTGT...ACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp ACAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGGCCCAGACAGCAGCTaGTCTTTTCCAGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: TESQGVFHADRQSGGGSGGPDSS*SFPGPG
Trigger: CCCTGGACCTGGAAAAGAGCAGCTGCTGTCTGGGCC...ACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTAAATAACTGCTCATTGCACCCAACCGTGCCAACGTaGCTGCCCGGAAGAACACCC +
Preference number: 4 (lower is better)
Translates to: PRVGAGGRDQLLNNCSLHPTVPT*LPGRTP
Trigger: GGGTGTTCTTCCGGGCAGGCACGTTGGCACGGTTGG...GTGCAATGAGCAGTTATTTAAGAGCTGATCTCTTCCACCTGCACCCACCCGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCTTCTTGATGTTCTTCTaGACACAGCGAATGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LWRDSASPTSAAWSCQTPFLMFF*TQRMAR
Trigger: CCTGGCCATTCGCTGTGTGCAGAAGAACATCAAGAA...GGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACTTCTTGATGTTCTTCTaGACACAGCGAATGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LERLCFAHLCRVELSDAHFLMFF*TQRMAR
Trigger: CCTGGCCATTCGCTGTGTGCAGAAGAACATCAAGAA...GTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCTCCTTCTCAAGCTTGCTaGGCAGCTGCTGGATCTCCT +
Preference number: 4 (lower is better)
Translates to: AMAEGKGDGKQVQHQVLPPSQAC*AAAGSP
Trigger: AGGAGATCCAGCAGCTGCGCAGCAAGCTTGAGAAGG...AGGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCCCTTCTCAAGCTTGCTaGGCAGCTGCTGGATCTCCT +
Preference number: 4 (lower is better)
Translates to: SNGRREGGWQTGPAPGTAPSQAC*AAAGSP
Trigger: AGGAGATCCAGCAGCTGCGCAGCAAGCTTGAGAAGG...GGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCTCCACCTTCTCAAGCTTaGTGCGCAGCTGCTGGATCT +
Preference number: 4 (lower is better)
Translates to: AMAEGKGDGKQVQHQVLPPPSQA*CAAAGS
Trigger: AGATCCAGCAGCTGCGCAGCAAGCTTGAGAAGGTGG...AGGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGATCCATCACCTCCATCTaGTTCTTCAGTGCGTCATAC +
Preference number: 4 (lower is better)
Translates to: LCRVELSDAHSLESPPDRSITSI*FFSASY
Trigger: GTATGACGCACTGAAGAAGCAGATGGAGGTGATGGA...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGTCTCCAGCTGCCTCCTaGTCTGCTGTTCCACCTCCA +
Preference number: 4 (lower is better)
Translates to: QKAKVFSMQIGSQVGAVVSPAAS*SAVPPP
Trigger: TGGAGGTGGAACAGCAGAGCAGGAGGCAGCTGGAGA...CACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGCTTGAGCTGCTGCAGTaGCCGTTGACTCTCATCACT +
Preference number: 4 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQLELLQ*PLTLIT
Trigger: AGTGATGAGAGTCAACGGGCACTGCAGCAGCTCAAG...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACCTTGAGCTGCTGCAGTaGCCGTTGACTCTCATCACT +
Preference number: 4 (lower is better)
Translates to: LSLERLCFAHLCRVELSDLELLQ*PLTLIT
Trigger: AGTGATGAGAGTCAACGGGCACTGCAGCAGCTCAAG...GTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACTTGAGCTGCTGCAGTaGCCGTTGACTCTCATCACT +
Preference number: 4 (lower is better)
Translates to: ALFGETLLRPPLPRGAVRLELLQ*PLTLIT
Trigger: AGTGATGAGAGTCAACGGGCACTGCAGCAGCTCAAG...TCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCTGCAGCTTGGTGTCCTaGAGCTCAGCTGTGAGCCTT +
Preference number: 4 (lower is better)
Translates to: KAKVFSMQIGSQVGAVVPCSLVS*SSAVSL
Trigger: AAGGCTCACAGCTGAGCTGCAGGACACCAAGCTGCA...GGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCTGGAGAAGTGAAGATGGAGGGGAGATTCCCAAGGCATCCCACAGGCCCCAGCTGTCGAACCTCCTCTaGTTCTTCTCCAGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: LWRSEDGGEIPKASHRPQLSNLL*FFSSSW
Trigger: CCACGAGCTGGAGAAGAAGCAGAGGAGGTTCGACAG...CTGGGGCCTGTGGGATGCCTTGGGAATCTCCCCTCCATCTTCACTTCTCCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCTGGAGTTTCTCCCTCTaGAGCTTCTCCCGCTGCGTC +
Preference number: 4 (lower is better)
Translates to: RKPRCFPCRSAVRWGQWCWSFSL*SFSRCV
Trigger: GACGCAGCGGGAGAAGCTGCAGAGGGAGAAACTCCA...GCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGAAGTGAAGATGGAGGGGAGATTCCCAAGGCATCCCACAGGCCCCAGCTGCAGTCCAAGTCCCGGAGCTaGTTCTTGACCTTGGCCAGA +
Preference number: 4 (lower is better)
Translates to: RSEDGGEIPKASHRPQLQSKSRS*FLTLAR
Trigger: TCTGGCCAAGGTCAAGAAGCAGCTCCGGGACTTGGA...CTGCAGCTGGGGCCTGTGGGATGCCTTGGGAATCTCCCCTCCATCTTCACTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACTACTCCTCCTCGAGCTaGACTTCCATCTGTTTTAAC +
Preference number: 4 (lower is better)
Translates to: HLCRVELSDAHSLESPPDYSSSS*TSICFN
Trigger: GTTAAAACAGATGGAAGTGCAGCTCGAGGAGGAGTA...GTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGTCATCAATCTGCAGGTaGAGGTCTTCCATCTCCACC +
Preference number: 4 (lower is better)
Translates to: CRVELSDAHSLESPPDRKSSICR*RSSIST
Trigger: GGTGGAGATGGAAGACCTGCACCTGCAGATTGATGA...CTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCAGCGATGTCATCAATCTaGAGGTGCAGGTCTTCCATC +
Preference number: 4 (lower is better)
Translates to: FGETLLRPPLPRGAVRRPAMSSI*RCRSSI
Trigger: GATGGAAGACCTGCACCTGCAGATTGATGACATCGC...TGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAGCGATGTCATCAATCTaGAGGTGCAGGTCTTCCATC +
Preference number: 4 (lower is better)
Translates to: SAAWSCQTPTAWKVPLTEAMSSI*RCRSSI
Trigger: GATGGAAGACCTGCACCTGCAGATTGATGACATCGC...TTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCGGCCTGGGCCACAGCTaGCTTGTGCTTCTTCATCAG +
Preference number: 4 (lower is better)
Translates to: RKPRCFPCRSAVRWGQWCGLGHS*LVLLHQ
Trigger: CTGATGAAGAAGCACAAGGCAGCTGTGGCCCAGGCC...GCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGGGCCTGGGCCACAGCTaGCTTGTGCTTCTTCATCAG +
Preference number: 4 (lower is better)
Translates to: QKAKVFSMQIGSQVGAVVGLGHS*LVLLHQ
Trigger: CTGATGAAGAAGCACAAGGCAGCTGTGGCCCAGGCC...CACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGAACTCCACCTGGCTCTaGAGAGCTTGTAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQNSTWL*RACSFS
Trigger: GGAGAAGCTACAAGCTCTGCAGAGCCAGGTGGAGTT...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCTTGTCCACCATGGACTaGTCCAGGAACTCCACCTGG +
Preference number: 4 (lower is better)
Translates to: SNGRREGGWQTGPAPGTALSTMD*SRNSTW
Trigger: CCAGGTGGAGTTCCTGGAGCAGTCCATGGTGGACAA...GGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCTTTGTCCACCATGGACTaGTCCAGGAACTCCACCTGG +
Preference number: 4 (lower is better)
Translates to: AMAEGKGDGKQVQHQVLPLSTMD*SRNSTW
Trigger: CCAGGTGGAGTTCCTGGAGCAGTCCATGGTGGACAA...AGGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGATCCATCTCCAGTTCATaGTTCTTGCGGCTAGCCTCG +
Preference number: 4 (lower is better)
Translates to: ALFGETLLRPPLPRGAVRSISSS*FLRLAS
Trigger: CGAGGCTAGCCGCAAGAAGCATGAACTGGAGATGGA...TCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGAGCTTTAGGTCGGCTTaGAGGCTTTGGTTAGCAGCT +
Preference number: 4 (lower is better)
Translates to: CRVELSDAHSLESPPDRKSFRSA*RLWLAA
Trigger: AGCTGCTAACCAAAGCCTGCAAGCCGACCTAAAGCT...CTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCTCCTCAATGGCAGCTTaGAAGTCCCCAATGCGTTTG +
Preference number: 4 (lower is better)
Translates to: SLERLCFAHLCRVELSDASSMAA*KSPMRL
Trigger: CAAACGCATTGGGGACTTGCAAGCTGCCATTGAGGA...GGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCATCCTCAATGGCAGCTTaGAAGTCCCCAATGCGTTTG +
Preference number: 4 (lower is better)
Translates to: FGETLLRPPLPRGAVRRPSSMAA*KSPMRL
Trigger: CAAACGCATTGGGGACTTGCAAGCTGCCATTGAGGA...TGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCTCTTCAGCGGCAATCTaGTCTTCCGTCTTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: KAKVFSMQIGSQVGAVVPSSAAI*SSVLAS
Trigger: GCTGGCCAAGACGGAAGAGCAGATTGCCGCTGAAGA...GGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000100794.10
ENSMUST00000164334.8
CDS-3UTR CCA 90 bp CCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTAAATAACTGCTCATTGCACGAGAGCAGGAGGTGGTaGTGGCACCAGAGCGGGAAG +
Preference number: 4 (lower is better)
Translates to: PRVGAGGRDQLLNNCSLHESRRW*WHQSGK
Trigger: CTTCCCGCTCTGGTGCCACCACCACCTCCTGCTCTC...GTGCAATGAGCAGTTATTTAAGAGCTGATCTCTTCCACCTGCACCCACCCGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
CDS-3UTR CCA 90 bp TGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTAGCCAAAGTCTCCTGTaGGTCTTCGTTGTAACTCCA +
Preference number: 4 (lower is better)
Translates to: CFAHLCRVELSDAHSLESSQSLL*VFVVTP
Trigger: TGGAGTTACAACGAAGACCCACAGGAGACTTTGGCT...ACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CCA 90 bp CTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCAGCCAAAGTCTCCTGTaGGTCTTCGTTGTAACTCCA +
Preference number: 4 (lower is better)
Translates to: LWRDSASPTSAAWSCQTPSQSLL*VFVVTP
Trigger: TGGAGTTACAACGAAGACCCACAGGAGACTTTGGCT...GGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CCA 90 bp TGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGTACCCAGAAGGACAATaGACTGGTCCTGACGACTCA +
Preference number: 4 (lower is better)
Translates to: CRVELSDAHSLESPPDRKYPEGQ*TGPDDS
Trigger: TGAGTCGTCAGGACCAGTCCATTGTCCTTCTGGGTA...CTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAATACCCAGAAGGACAATaGACTGGTCCTGACGACTCA +
Preference number: 4 (lower is better)
Translates to: SAAWSCQTPTAWKVPLTEYPEGQ*TGPDDS
Trigger: TGAGTCGTCAGGACCAGTCCATTGTCCTTCTGGGTA...TTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCACTGAGAACACCTTaGTCCCACTGGTACCCGCGA +
Preference number: 4 (lower is better)
Translates to: QKAKVFSMQIGSQVGAVVPLRTP*SHWYPR
Trigger: TCGCGGGTACCAGTGGGACCAAGGTGTTCTCAGTGG...CACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCACTGAGAACACCTTaGTCCCACTGGTACCCGCGA +
Preference number: 4 (lower is better)
Translates to: RKPRCFPCRSAVRWGQWCPLRTP*SHWYPR
Trigger: TCGCGGGTACCAGTGGGACCAAGGTGTTCTCAGTGG...GCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GAGTACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGTCCAGGGAGAGGATCTaGGAGAAGCGGGTGGCACTG +
Preference number: 4 (lower is better)
Translates to: EYKAMAEGKGDGKQVQHQSRERI*EKRVAL
Trigger: CAGTGCCACCCGCTTCTCCCAGATCCTCTCCCTGGA...CTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGTACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp ACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTCCAGGGAGAGGATCTaGGAGAAGCGGGTGGCACTG +
Preference number: 4 (lower is better)
Translates to: TKQWQKGRGMANRSSTRYSRERI*EKRVAL
Trigger: CAGTGCCACCCGCTTCTCCCAGATCCTCTCCCTGGA...GTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GAGTACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGCCACCTGGCCAGCTTaGTCAAAGTCCAGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: EYKAMAEGKGDGKQVQHQATWPA*SKSRER
Trigger: CCTCTCCCTGGACTTTGACCAAGCTGGCCAGGTGGC...CTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGTACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GAGTACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGAGGCCGAAGCCACCTaGCCAGCTTGGTCAAAGTCC +
Preference number: 4 (lower is better)
Translates to: EYKAMAEGKGDGKQVQHQEAEAT*PAWSKS
Trigger: GGACTTTGACCAAGCTGGCCAGGTGGCTTCGGCCTC...CTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGTACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp ACAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGAGGCCGAAGCCACCTaGCCAGCTTGGTCAAAGTCC +
Preference number: 4 (lower is better)
Translates to: TESQGVFHADRQSGGGSGEAEAT*PAWSKS
Trigger: GGACTTTGACCAAGCTGGCCAGGTGGCTTCGGCCTC...ACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACAGGAGTAGCCTCACTGGCTaGGCGCCGGGCCACACGCAG +
Preference number: 4 (lower is better)
Translates to: LQSDKQTKTSTFHCAHHRSSLTG*APGHTQ
Trigger: CTGCGTGTGGCCCGGCGCCCAGCCAGTGAGGCTACT...CCTGTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTCAGGCTTGGACAGTaGCACAATTCCAAACACATT +
Preference number: 4 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSLRLGQ*HNSKHI
Trigger: AATGTGTTTGGAATTGTGCCACTGTCCAAGCCTGAG...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGCTCAGGCTTGGACAGTaGCACAATTCCAAACACATT +
Preference number: 4 (lower is better)
Translates to: RLCFAHLCRVELSDAHSLLRLGQ*HNSKHI
Trigger: AATGTGTTTGGAATTGTGCCACTGTCCAAGCCTGAG...CAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCACCTTCATGGCAGCCTaGAGCTTACTGAACTGCTGT +
Preference number: 4 (lower is better)
Translates to: SLERLCFAHLCRVELSDATFMAA*SLLNCC
Trigger: ACAGCAGTTCAGTAAGCTCCAGGCTGCCATGAAGGT...GGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCACCTTCATGGCAGCCTaGAGCTTACTGAACTGCTGT +
Preference number: 4 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRTFMAA*SLLNCC
Trigger: ACAGCAGTTCAGTAAGCTCCAGGCTGCCATGAAGGT...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp ACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACGTTCCTCGGGGGAGATaGCCAGCACCTTCATGGCAG +
Preference number: 4 (lower is better)
Translates to: TKQWQKGRGMANRSSTRYVPRGR*PAPSWQ
Trigger: CTGCCATGAAGGTGCTGGCCATCTCCCCCGAGGAAC...GTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGAAGTGAAGATGGAGGGGAGATTCCCAAGGCATCCCACAGGCCCCAGCTGCAGTTCTGGGCCCATTCGTaGCGGGCAAACTGCTTTCGT +
Preference number: 4 (lower is better)
Translates to: RSEDGGEIPKASHRPQLQFWAHS*RANCFR
Trigger: ACGAAAGCAGTTTGCCCGCCACGAATGGGCCCAGAA...CTGCAGCTGGGGCCTGTGGGATGCCTTGGGAATCTCCCCTCCATCTTCACTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGCAGGAGGCTGAGATGGAGGTCCACCACCGGCTCCATGGAATGCCAGGCCACCGTGCCTCCTTTTAGCTaGTGTTTGAAGATAGCCGAG +
Preference number: 4 (lower is better)
Translates to: SRRLRWRSTTGSMECQATVPPFS*CLKIAE
Trigger: CTCGGCTATCTTCAAACACCAGCTAAAAGGAGGCAC...GGTGGCCTGGCATTCCATGGAGCCGGTGGTGGACCTCCATCTCAGCCTCCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCGTGCCTCCTTTTAGCTaGTGTTTGAAGATAGCCGAG +
Preference number: 4 (lower is better)
Translates to: LWRDSASPTSAAWSCQTPVPPFS*CLKIAE
Trigger: CTCGGCTATCTTCAAACACCAGCTAAAAGGAGGCAC...GGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCATTCAGGGTTCTaGAAGCCTGGTGTGTCCACG +
Preference number: 4 (lower is better)
Translates to: QKAKVFSMQIGSQVGAVVPHSGF*KPGVST
Trigger: CGTGGACACACCAGGCTTCCAGAACCCTGAATGGGG...CACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCCATTCAGGGTTCTaGAAGCCTGGTGTGTCCACG +
Preference number: 4 (lower is better)
Translates to: RKPRCFPCRSAVRWGQWCPHSGF*KPGVST
Trigger: CGTGGACACACCAGGCTTCCAGAACCCTGAATGGGG...GCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp ACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACAGGAAGGTGCGCTCGTaGAACAGCCTCTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: TKQWQKGRGMANRSSTRYRKVRS*NSLCSL
Trigger: CAGGCTGCAGAGGCTGTTCCACGAGCGCACCTTCCT...GTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp ACAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTAGGAAGGTGCGCTCGTaGAACAGCCTCTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: TESQGVFHADRQSGGGSGRKVRS*NSLCSL
Trigger: CAGGCTGCAGAGGCTGTTCCACGAGCGCACCTTCCT...ACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCTATCTCTCCAACTCCTaGAGGAAGGTGCGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: SNGRREGGWQTGPAPGTAYLSNS*RKVRSW
Trigger: CCACGAGCGCACCTTCCTCCAGGAGTTGGAGAGATA...GGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGAGTGAGCGAACCAGGTaGGAAGCCTGGTCCACAGCA +
Preference number: 4 (lower is better)
Translates to: QKAKVFSMQIGSQVGAVVSERTR*EAWSTA
Trigger: TGCTGTGGACCAGGCTTCCCACCTGGTTCGCTCACT...CACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCTTGGTACCGTGGCTGTaGCCCAGGAGAAAGTGCCGA +
Preference number: 4 (lower is better)
Translates to: RKPRCFPCRSAVRWGQWCLVPWL*PRRKCR
Trigger: TCGGCACTTTCTCCTGGGCCACAGCCACGGTACCAA...GCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGTTGGTACCGTGGCTGTaGCCCAGGAGAAAGTGCCGA +
Preference number: 4 (lower is better)
Translates to: QKAKVFSMQIGSQVGAVVLVPWL*PRRKCR
Trigger: TCGGCACTTTCTCCTGGGCCACAGCCACGGTACCAA...CACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGACCCAGTTGGTACCGTaGCTGTGGCCCAGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: QKAKVFSMQIGSQVGAVVTQLVP*LWPRRK
Trigger: CTTTCTCCTGGGCCACAGCCACGGTACCAACTGGGT...CACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCACCCAGTTGGTACCGTaGCTGTGGCCCAGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: RKPRCFPCRSAVRWGQWCTQLVP*LWPRRK
Trigger: CTTTCTCCTGGGCCACAGCCACGGTACCAACTGGGT...GCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCTGTACTCCACCCAGTTaGTACCGTGGCTGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: RKPRCFPCRSAVRWGQWCCTPPS*YRGCGP
Trigger: TGGGCCACAGCCACGGTACCAACTGGGTGGAGTACA...GCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp ACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACAGCCGGGGTGCATTCTaGGTGGCTGGGTTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: TKQWQKGRGMANRSSTRYSRGAF*VAGFCL
Trigger: CAAGCAGAACCCAGCCACCCAGAATGCACCCCGGCT...GTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACCGGCGCAAGGCCAGCTaGGAGCCACCTTCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: GLQSDKQTKTSTFHCAHHRRKAS*EPPSRP
Trigger: AGGCCTGGAAGGTGGCTCCCAGCTGGCCTTGCGCCG...GTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCAAACACCATGTGGTCTaGGTAACCTTGGCGGTACAT +
Preference number: 4 (lower is better)
Translates to: LWRDSASPTSAAWSCQTPKHHVV*VTLAVH
Trigger: ATGTACCGCCAAGGTTACCCAGACCACATGGTGTTT...GGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAACACCATGTGGTCTaGGTAACCTTGGCGGTACAT +
Preference number: 4 (lower is better)
Translates to: LCRVELSDAHSLESPPDRKHHVV*VTLAVH
Trigger: ATGTACCGCCAAGGTTACCCAGACCACATGGTGTTT...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAAACACCATGTGGTCTaGGTAACCTTGGCGGTACAT +
Preference number: 4 (lower is better)
Translates to: LERLCFAHLCRVELSDAHKHHVV*VTLAVH
Trigger: ATGTACCGCCAAGGTTACCCAGACCACATGGTGTTT...GTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCATTTCTTGGTCAGGTGTaGAGCCAGGACATCAAAGCG +
Preference number: 4 (lower is better)
Translates to: FGETLLRPPLPRGAVRRPFLGQV*SQDIKA
Trigger: CGCTTTGATGTCCTGGCTCCACACCTGACCAAGAAA...TGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGTTTCTTGGTCAGGTGTaGAGCCAGGACATCAAAGCG +
Preference number: 4 (lower is better)
Translates to: CRVELSDAHSLESPPDRKFLGQV*SQDIKA
Trigger: CGCTTTGATGTCCTGGCTCCACACCTGACCAAGAAA...CTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCTCTGCACACAGCGAATaGCCAGGTCCTGGATCTTTC +
Preference number: 4 (lower is better)
Translates to: KPRCFPCRSAVRWGQWCPSAHSE*PGPGSF
Trigger: GAAAGATCCAGGACCTGGCCATTCGCTGTGTGCAGA...GGGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACTCTGCACACAGCGAATaGCCAGGTCCTGGATCTTTC +
Preference number: 4 (lower is better)
Translates to: LSLERLCFAHLCRVELSDSAHSE*PGPGSF
Trigger: GAAAGATCCAGGACCTGGCCATTCGCTGTGTGCAGA...GTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACTCCGCGTCCAGCAGCTaGGAGGCGGACTCTCCCGTG +
Preference number: 4 (lower is better)
Translates to: GLQSDKQTKTSTFHCAHHSASSS*EADSPV
Trigger: CACGGGAGAGTCCGCCTCCCAGCTGCTGGACGCGGA...GTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp ACAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTTGGTTTCGGACCTGCTaGCCCTCCAGGTGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: TESQGVFHADRQSGGGSGWFRTC*PSRCSL
Trigger: CAAGCTGCACCTGGAGGGCCAGCAGGTCCGAAACCA...ACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCGTCTCCTCGTGGGCCTaGGAAAGCTCACTGTCGAAC +
Preference number: 4 (lower is better)
Translates to: RKPRCFPCRSAVRWGQWCVSSWA*ESSLSN
Trigger: GTTCGACAGTGAGCTTTCCCAGGCCCACGAGGAGAC...GCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCTCTCCAGACGCAGCTTaGCCTGCTCCAGCATCTGTA +
Preference number: 4 (lower is better)
Translates to: SNGRREGGWQTGPAPGTASPDAA*PAPASV
Trigger: TACAGATGCTGGAGCAGGCCAAGCTGCGTCTGGAGA...GGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCTTCTCCAGACGCAGCTTaGCCTGCTCCAGCATCTGTA +
Preference number: 4 (lower is better)
Translates to: AMAEGKGDGKQVQHQVLPSPDAA*PAPASV
Trigger: TACAGATGCTGGAGCAGGCCAAGCTGCGTCTGGAGA...AGGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp ACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGACTCTCCATCTCCTTaGAATGGGTCTGTCTCATTC +
Preference number: 4 (lower is better)
Translates to: TSAAWSCQTPTAWKVPLTDSPSP*NGSVSF
Trigger: GAATGAGACAGACCCATTCCAAGGAGATGGAGAGTC...TGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCTGCCAGCAGCGCTTTaGTGCGCTTCAGGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: QKAKVFSMQIGSQVGAVVLPAAL*CASGLS
Trigger: GGAAAGACCTGAAGCGCACCAAAGCGCTGCTGGCAG...CACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCTGCCAGCAGCGCTTTaGTGCGCTTCAGGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: RKPRCFPCRSAVRWGQWCLPAAL*CASGLS
Trigger: GGAAAGACCTGAAGCGCACCAAAGCGCTGCTGGCAG...GCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCGCATTGTTCTTTAAGTaGTCCAGCATGATCTGGGCA +
Preference number: 4 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSALFFK*SSMIWA
Trigger: TGCCCAGATCATGCTGGACCACTTAAAGAACAATGC...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACGCATTGTTCTTTAAGTaGTCCAGCATGATCTGGGCA +
Preference number: 4 (lower is better)
Translates to: HLCRVELSDAHSLESPPDALFFK*SSMIWA
Trigger: TGCCCAGATCATGCTGGACCACTTAAAGAACAATGC...GTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGCATTGTTCTTTAAGTaGTCCAGCATGATCTGGGCA +
Preference number: 4 (lower is better)
Translates to: RLCFAHLCRVELSDAHSLALFFK*SSMIWA
Trigger: TGCCCAGATCATGCTGGACCACTTAAAGAACAATGC...CAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCAGCTGGTTCTTCAGCTaGGCAATCTCCCTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: KPRCFPCRSAVRWGQWCPSWFFS*AISLLL
Trigger: GAGCAAGAGGGAGATTGCCCAGCTGAAGAACCAGCT...GGGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAGCGCTGTCTTGGCTTTaGCGATGTCATCAATCTGCA +
Preference number: 4 (lower is better)
Translates to: SAAWSCQTPTAWKVPLTEALSWL*RCHQSA
Trigger: TGCAGATTGATGACATCGCCAAAGCCAAGACAGCGC...TTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCAGCGCTGTCTTGGCTTTaGCGATGTCATCAATCTGCA +
Preference number: 4 (lower is better)
Translates to: FGETLLRPPLPRGAVRRPALSWL*RCHQSA
Trigger: TGCAGATTGATGACATCGCCAAAGCCAAGACAGCGC...TGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCGCGCTGTCTTGGCTTTaGCGATGTCATCAATCTGCA +
Preference number: 4 (lower is better)
Translates to: SLERLCFAHLCRVELSDAALSWL*RCHQSA
Trigger: TGCAGATTGATGACATCGCCAAAGCCAAGACAGCGC...GGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGCCTCCAGCGCTGTCTTaGCTTTGGCGATGTCATCAA +
Preference number: 4 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQPPALS*LWRCHQ
Trigger: TTGATGACATCGCCAAAGCCAAGACAGCGCTGGAGG...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACCCTCCAGCGCTGTCTTaGCTTTGGCGATGTCATCAA +
Preference number: 4 (lower is better)
Translates to: LSLERLCFAHLCRVELSDPPALS*LWRCHQ
Trigger: TTGATGACATCGCCAAAGCCAAGACAGCGCTGGAGG...GTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TCTGGGGTAAGTGTGTGGGGACAGGGTTATGGGCAGAAGAAAGATGACAAAGGGATGTCCCGGGAGGCCTaGGCCACAGCTGCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: SGVSVWGQGYGQKKDDKGMSREA*ATAALC
Trigger: GCACAAGGCAGCTGTGGCCCAGGCCTCCCGGGACAT...CCCTTTGTCATCTTTCTTCTGCCCATAACCCTGTCCCCACACACTTACCCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACCTTGCTTCTCCTTGTTaGACTCTTCAATCTGAGCCT +
Preference number: 4 (lower is better)
Translates to: HLCRVELSDAHSLESPPDLASPC*TLQSEP
Trigger: AGGCTCAGATTGAAGAGTCCAACAAGGAGAAGCAAG...GTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTTGCTTCTCCTTGTTaGACTCTTCAATCTGAGCCT +
Preference number: 4 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSLASPC*TLQSEP
Trigger: AGGCTCAGATTGAAGAGTCCAACAAGGAGAAGCAAG...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGAAGTGAAGATGGAGGGGAGATTCCCAAGGCATCCCACAGGCCCCAGCTGCAGTCCAGGAACTCCACCTaGCTCTGCAGAGCTTGTAGC +
Preference number: 4 (lower is better)
Translates to: RSEDGGEIPKASHRPQLQSRNST*LCRACS
Trigger: GCTACAAGCTCTGCAGAGCCAGGTGGAGTTCCTGGA...CTGCAGCTGGGGCCTGTGGGATGCCTTGGGAATCTCCCCTCCATCTTCACTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCTCCAGGAACTCCACCTaGCTCTGCAGAGCTTGTAGC +
Preference number: 4 (lower is better)
Translates to: KAKVFSMQIGSQVGAVVPSRNST*LCRACS
Trigger: GCTACAAGCTCTGCAGAGCCAGGTGGAGTTCCTGGA...GGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCTCCAGGCGCTTCACTTaGGTCTTTTCGAACTCCAGG +
Preference number: 4 (lower is better)
Translates to: KPRCFPCRSAVRWGQWCPSRRFT*VFSNSR
Trigger: CCTGGAGTTCGAAAAGACCCAAGTGAAGCGCCTGGA...GGGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACTCCAGGCGCTTCACTTaGGTCTTTTCGAACTCCAGG +
Preference number: 4 (lower is better)
Translates to: LSLERLCFAHLCRVELSDSRRFT*VFSNSR
Trigger: CCTGGAGTTCGAAAAGACCCAAGTGAAGCGCCTGGA...GTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGAAGTGAAGATGGAGGGGAGATTCCCAAGGCATCCCACAGGCCCCAGCTGCAGCGCTCATCTCCTCCTTaGTGTCACGAAGCTGTCGCT +
Preference number: 4 (lower is better)
Translates to: RSEDGGEIPKASHRPQLQRSSPP*CHEAVA
Trigger: AGCGACAGCTTCGTGACACCAAGGAGGAGATGAGCG...CTGCAGCTGGGGCCTGTGGGATGCCTTGGGAATCTCCCCTCCATCTTCACTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCCATCTCATCCTCAATaGCAGCTTGCAAGTCCCCAA +
Preference number: 4 (lower is better)
Translates to: CRVELSDAHSLESPPDRKPSHPQ*QLASPQ
Trigger: TTGGGGACTTGCAAGCTGCCATTGAGGATGAGATGG...CTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGAGTGGCTGGTTGGGCTaGAACTCTTCAAGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQSGWLG*NSSSCH
Trigger: ATGGCAGCTTGAAGAGTTCCAGCCCAACCAGCCACT...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCGTGGCTTCCAGTGGCTaGTTGGGCTGGAACTCTTCA +
Preference number: 4 (lower is better)
Translates to: SNGRREGGWQTGPAPGTAVASSG*LGWNSS
Trigger: TGAAGAGTTCCAGCCCAACCAGCCACTGGAAGCCAC...GGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGTGCCTTCTTCACCCTTaGGGTCATCACTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: QKAKVFSMQIGSQVGAVVCLLHP*GHHWSW
Trigger: CCAGCTCCAGTGATGACCTCAAGGGTGAAGAAGGCA...CACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR TCA 90 bp AGGCAGGCAGAGCTGGAAGCCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTCGTTTGACAATCATCTaGGAGTTCTGCTTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: RQAELEAAGGCRWKRSALRLTII*EFCLAS
Trigger: ACTGGCCAAGCAGAACTCTCAGATGATTGTCAAACG...AAGAGCTGATCTCTTCCACCTGCACCCACCCGCGGCTTCCAGCTCTGCCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
CDS-3UTR TCA 90 bp TCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCGTTTGACAATCATCTaGGAGTTCTGCTTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: SLERLCFAHLCRVELSDARLTII*EFCLAS
Trigger: ACTGGCCAAGCAGAACTCTCAGATGATTGTCAAACG...GGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR TCA 90 bp AGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCGTGCATCACCTTCTCTaGATACACAGCAGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: RKPRCFPCRSAVRWGQWCVHHLL*IHSRSP
Trigger: GGGGCTCCTGCTGTGTATTCAGAGAAGGTGATGCAC...GCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp ACAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTCCCGCCGACACCCCTTaGACATGTGCATCACCTTCT +
Preference number: 4 (lower is better)
Translates to: TESQGVFHADRQSGGGSGPADTP*TCASPS
Trigger: AGAAGGTGATGCACATGTTCAAGGGGTGTCGGCGGG...ACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCTACTGCACCAGATGCTaGAAGCTGGTAGTCTTGCCA +
Preference number: 4 (lower is better)
Translates to: KPRCFPCRSAVRWGQWCPYCTRC*KLVVLP
Trigger: TGGCAAGACTACCAGCTTTCAGCATCTGGTGCAGTA...GGGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp GCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGATACTGCACCAGATGCTaGAAGCTGGTAGTCTTGCCA +
Preference number: 4 (lower is better)
Translates to: ALFGETLLRPPLPRGAVRYCTRC*KLVVLP
Trigger: TGGCAAGACTACCAGCTTTCAGCATCTGGTGCAGTA...TCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACAGGGGTGGAGCTCTGTCCTaGGGGTGGCATCCCCACAGG +
Preference number: 4 (lower is better)
Translates to: LQSDKQTKTSTFHCAHHRGGALS*GWHPHR
Trigger: CCTGTGGGGATGCCACCCTCAGGACAGAGCTCCACC...CCTGTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp GAGTACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGAGTGCTGGCTGGACTTaGGAGCCCTGTTTACCAGGG +
Preference number: 4 (lower is better)
Translates to: EYKAMAEGKGDGKQVQHQSAGWT*EPCLPG
Trigger: CCCTGGTAAACAGGGCTCTCAAGTCCAGCCAGCACT...CTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGTACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AGAAGTGAAGATGGAGGGGAGATTCCCAAGGCATCCCACAGGCCCCAGCTGCAGCATCATGGAACAGAGTaGGTGCTGGCTGGACTTGAG +
Preference number: 4 (lower is better)
Translates to: RSEDGGEIPKASHRPQLQHHGTE*VLAGLE
Trigger: CTCAAGTCCAGCCAGCACTCACTCTGTTCCATGATG...CTGCAGCTGGGGCCTGTGGGATGCCTTGGGAATCTCCCCTCCATCTTCACTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CTCTGGAGAAGTGAAGATGGAGGGGAGATTCCCAAGGCATCCCACAGGCCCCAGCATCATGGAACAGAGTaGGTGCTGGCTGGACTTGAG +
Preference number: 4 (lower is better)
Translates to: LWRSEDGGEIPKASHRPQHHGTE*VLAGLE
Trigger: CTCAAGTCCAGCCAGCACTCACTCTGTTCCATGATG...CTGGGGCCTGTGGGATGCCTTGGGAATCTCCCCTCCATCTTCACTTCTCCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CTCTGGAGAAGTGAAGATGGAGGGGAGATTCCCAAGGCATCCCACAGGCCCCAGTTTGGCACTTCTTCTTaGGCTGCTGCAGTGCCCGTT +
Preference number: 4 (lower is better)
Translates to: LWRSEDGGEIPKASHRPQFGTSS*AAAVPV
Trigger: AACGGGCACTGCAGCAGCTCAAGAAGAAGTGCCAAA...CTGGGGCCTGTGGGATGCCTTGGGAATCTCCCCTCCATCTTCACTTCTCCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCTGTTTTAACTTCTTCTaGCATGACTGCCGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRCFNFF*HDCRAS
Trigger: AGAGGCCCGGCAGTCATGTCAGAAGAAGTTAAAACA...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AGGCAGGCAGAGCTGGAAGCCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTTGTTTTAACTTCTTCTaGCATGACTGCCGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: RQAELEAAGGCRWKRSALCFNFF*HDCRAS
Trigger: AGAGGCCCGGCAGTCATGTCAGAAGAAGTTAAAACA...AAGAGCTGATCTCTTCCACCTGCACCCACCCGCGGCTTCCAGCTCTGCCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp TCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCTGTTTTAACTTCTTCTaGCATGACTGCCGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: SLERLCFAHLCRVELSDACFNFF*HDCRAS
Trigger: AGAGGCCCGGCAGTCATGTCAGAAGAAGTTAAAACA...GGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AGAAGTGAAGATGGAGGGGAGATTCCCAAGGCATCCCACAGGCCCCAGCTGCAGTTAAGTGGTCCAGCATaGTCTGGGCATCTGCCAGCA +
Preference number: 4 (lower is better)
Translates to: RSEDGGEIPKASHRPQLQLSGPA*SGHLPA
Trigger: TGCTGGCAGATGCCCAGATCATGCTGGACCACTTAA...CTGCAGCTGGGGCCTGTGGGATGCCTTGGGAATCTCCCCTCCATCTTCACTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CTCTGGAGAAGTGAAGATGGAGGGGAGATTCCCAAGGCATCCCACAGGCCCCAGTTAAGTGGTCCAGCATaGTCTGGGCATCTGCCAGCA +
Preference number: 4 (lower is better)
Translates to: LWRSEDGGEIPKASHRPQLSGPA*SGHLPA
Trigger: TGCTGGCAGATGCCCAGATCATGCTGGACCACTTAA...CTGGGGCCTGTGGGATGCCTTGGGAATCTCCCCTCCATCTTCACTTCTCCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp TTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCATCTTCCAGCCGGTTTTaGATCTCGTTTTTCTCACGC +
Preference number: 4 (lower is better)
Translates to: FGETLLRPPLPRGAVRRPSSSRF*ISFFSR
Trigger: GCGTGAGAAAAACGAGATTCAAAACCGGCTGGAAGA...TGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp TCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAATCTTCCAGCCGGTTTTaGATCTCGTTTTTCTCACGC +
Preference number: 4 (lower is better)
Translates to: SAAWSCQTPTAWKVPLTESSSRF*ISFFSR
Trigger: GCGTGAGAAAAACGAGATTCAAAACCGGCTGGAAGA...TTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCTCTCCATGGTTTCTTTaGGCCGACTGGCCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: KAKVFSMQIGSQVGAVVPSPWFL*ADWPGS
Trigger: AGAACCTGGCCAGTCGGCTCAAAGAAACCATGGAGA...GGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCAGGTCCCTTGTTCTTTaGCAACCAGGACTTGACCCC +
Preference number: 4 (lower is better)
Translates to: KAKVFSMQIGSQVGAVVPRSLVL*QPGLDP
Trigger: GGGGTCAAGTCCTGGTTGTCAAAGAACAAGGGACCT...GGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACCTTCTCTTCCTTCTTTaGCCGTCTTGGAGTTTGCCC +
Preference number: 4 (lower is better)
Translates to: LSLERLCFAHLCRVELSDLLFLL*PSWSLP
Trigger: GGGCAAACTCCAAGACGGTCAAAGAAGGAAGAGAAG...GTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS-3UTR GCA 90 bp TCTGGGGTAAGTGTGTGGGGACAGGGTTATGGGCAGAAGAAAGATGACAAAGGGAGGCCAGGTCCTTGGTaGCTGCCCCTGGCTCAGCAA +
Preference number: 4 (lower is better)
Translates to: SGVSVWGQGYGQKKDDKGRPGPW*LPLAQQ
Trigger: TTGCTGAGCCAGGGGCAGGCACCAAGGACCTGGCCT...CCCTTTGTCATCTTTCTTCTGCCCATAACCCTGTCCCCACACACTTACCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
CDS-3UTR GCA 90 bp GAAGGGGCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAGGCCAGGTCCTTGGTaGCTGCCCCTGGCTCAGCAA +
Preference number: 4 (lower is better)
Translates to: EGAFYFLTSIRSTGRAQPRPGPW*LPLAQQ
Trigger: TTGCTGAGCCAGGGGCAGGCACCAAGGACCTGGCCT...GGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGCCCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
CDS-3UTR GCA 90 bp TGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCACCCCTTGAACATGTaGATCACCTTCTCTGAATAC +
Preference number: 4 (lower is better)
Translates to: CFAHLCRVELSDAHSLESHPLNM*ITFSEY
Trigger: GTATTCAGAGAAGGTGATGCACATGTTCAAGGGGTG...ACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGCAGGAGGCTGAGATGGAGGTCCACCACCGGCTCCATGGAATGCCAGGCCACCCACCCCTTGAACATGTaGATCACCTTCTCTGAATAC +
Preference number: 4 (lower is better)
Translates to: SRRLRWRSTTGSMECQATHPLNM*ITFSEY
Trigger: GTATTCAGAGAAGGTGATGCACATGTTCAAGGGGTG...GGTGGCCTGGCATTCCATGGAGCCGGTGGTGGACCTCCATCTCAGCCTCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCCACCCCTTGAACATGTaGATCACCTTCTCTGAATAC +
Preference number: 4 (lower is better)
Translates to: AAWSCQTPTAWKVPLTESHPLNM*ITFSEY
Trigger: GTATTCAGAGAAGGTGATGCACATGTTCAAGGGGTG...GCTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACCAACATCGCCCTATATaGAGTCTGGGCTACAGCGTA +
Preference number: 4 (lower is better)
Translates to: LSLERLCFAHLCRVELSDQHRPI*SLGYSV
Trigger: TACGCTGTAGCCCAGACTGCATATAGGGCGATGTTG...GTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGAGGGTGGACAGAGCCTaGCACTTCTCCACTGAGAAC +
Preference number: 4 (lower is better)
Translates to: QKAKVFSMQIGSQVGAVVRVDRA*HFSTEN
Trigger: GTTCTCAGTGGAGAAGTGGCAGGCTCTGTCCACCCT...CACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAACACATTGTTCTCTaGCAAGTGGTTCAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: LCRVELSDAHSLESPPDRKHIVL*QVVQVE
Trigger: CTCCACCTGAACCACTTGGCAGAGAACAATGTGTTT...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCAAACACATTGTTCTCTaGCAAGTGGTTCAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: LWRDSASPTSAAWSCQTPKHIVL*QVVQVE
Trigger: CTCCACCTGAACCACTTGGCAGAGAACAATGTGTTT...GGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGCAGGAGGCTGAGATGGAGGTCCACCACCGGCTCCATGGAATGCCAGGCCACCAAACACATTGTTCTCTaGCAAGTGGTTCAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: SRRLRWRSTTGSMECQATKHIVL*QVVQVE
Trigger: CTCCACCTGAACCACTTGGCAGAGAACAATGTGTTT...GGTGGCCTGGCATTCCATGGAGCCGGTGGTGGACCTCCATCTCAGCCTCCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCAAACACATTGTTCTCTaGCAAGTGGTTCAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: AAWSCQTPTAWKVPLTESKHIVL*QVVQVE
Trigger: CTCCACCTGAACCACTTGGCAGAGAACAATGTGTTT...GCTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCTGCTGTGCAGCCTTCTaGTTCTCCTCAGGCTTGGAC +
Preference number: 4 (lower is better)
Translates to: RKPRCFPCRSAVRWGQWCCCAAF*FSSGLD
Trigger: GTCCAAGCCTGAGGAGAAGCAGAAGGCTGCACAGCA...GCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACTTACTGAACTGCTGTaGAGCCTTCTGCTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: ALFGETLLRPPLPRGAVRLTELL*SLLLLL
Trigger: GAGGAGAAGCAGAAGGCTGCACAGCAGTTCAGTAAG...TCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACCTTACTGAACTGCTGTaGAGCCTTCTGCTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: LSLERLCFAHLCRVELSDLTELL*SLLLLL
Trigger: GAGGAGAAGCAGAAGGCTGCACAGCAGTTCAGTAAG...GTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGATGGAGCTTACTGAACTaGTGTGCAGCCTTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: ALFGETLLRPPLPRGAVRWSLLN*CAAFCF
Trigger: GAAGCAGAAGGCTGCACAGCAGTTCAGTAAGCTCCA...TCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACTGGAGCTTACTGAACTaGTGTGCAGCCTTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: LSLERLCFAHLCRVELSDWSLLN*CAAFCF
Trigger: GAAGCAGAAGGCTGCACAGCAGTTCAGTAAGCTCCA...GTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCTGGACCGTTGCAGGGTaGCTCCTTTTAGCTGGTGTT +
Preference number: 4 (lower is better)
Translates to: SNGRREGGWQTGPAPGTAWTVAG*LLLAGV
Trigger: AACACCAGCTAAAAGGAGGCACCCTGCAACGGTCCA...GGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGAAGTGAAGATGGAGGGGAGATTCCCAAGGCATCCCACAGGCCCCAGCTGCAGTGGACCGTTGCAGGGTaGCTCCTTTTAGCTGGTGTT +
Preference number: 4 (lower is better)
Translates to: RSEDGGEIPKASHRPQLQWTVAG*LLLAGV
Trigger: AACACCAGCTAAAAGGAGGCACCCTGCAACGGTCCA...CTGCAGCTGGGGCCTGTGGGATGCCTTGGGAATCTCCCCTCCATCTTCACTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTAAATAACTGCTCATTGCACGAGCACTCAGTTTGGTaGCCTCTCCCAGGCCGCTCT +
Preference number: 4 (lower is better)
Translates to: PRVGAGGRDQLLNNCSLHEHSVW*PLPGRS
Trigger: AGAGCGGCCTGGGAGAGGGCACCAAACTGAGTGCTC...GTGCAATGAGCAGTTATTTAAGAGCTGATCTCTTCCACCTGCACCCACCCGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACAGGAGAGCACCGTGGCACTaGCCGCCCGGCCCAGAAACA +
Preference number: 4 (lower is better)
Translates to: LQSDKQTKTSTFHCAHHRRAPWH*PPGPET
Trigger: TGTTTCTGGGCCGGGCGGGCAGTGCCACGGTGCTCT...CCTGTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGATGAGGGCATCTACTTaGAGCTTAATCTGTATGCAC +
Preference number: 4 (lower is better)
Translates to: RLCFAHLCRVELSDAHSLMRAST*SLICMH
Trigger: GTGCATACAGATTAAGCTGCAAGTAGATGCCCTCAT...CAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp ACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAAAGCAGTGCACGAAATaGATCTTGGACCTCTTGATG +
Preference number: 4 (lower is better)
Translates to: TSAAWSCQTPTAWKVPLTKQCTK*ILDLLM
Trigger: CATCAAGAGGTCCAAGATGCATTTCGTGCACTGCTT...TGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTAAGCAGTGCACGAAATaGATCTTGGACCTCTTGATG +
Preference number: 4 (lower is better)
Translates to: CFAHLCRVELSDAHSLESKQCTK*ILDLLM
Trigger: CATCAAGAGGTCCAAGATGCATTTCGTGCACTGCTT...ACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGGCAGGCAGAGCTGGAAGCCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTACAGGAAGGAAGCAGTaGACGAAATGCATCTTGGAC +
Preference number: 4 (lower is better)
Translates to: RQAELEAAGGCRWKRSALTGRKQ*TKCILD
Trigger: GTCCAAGATGCATTTCGTGCACTGCTTCCTTCCTGT...AAGAGCTGATCTCTTCCACCTGCACCCACCCGCGGCTTCCAGCTCTGCCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCAACAGGAAGGAAGCAGTaGACGAAATGCATCTTGGAC +
Preference number: 4 (lower is better)
Translates to: FGETLLRPPLPRGAVRRPTGRKQ*TKCILD
Trigger: GTCCAAGATGCATTTCGTGCACTGCTTCCTTCCTGT...TGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACCCGTGCCAACGTGCCTaGCCGGAAGAACACCCGGCT +
Preference number: 4 (lower is better)
Translates to: GLQSDKQTKTSTFHCAHHPCQRA*PEEHPA
Trigger: AGCCGGGTGTTCTTCCGGGCAGGCACGTTGGCACGG...GTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TCTGGGGTAAGTGTGTGGGGACAGGGTTATGGGCAGAAGAAAGATGACAAAGGGCCAACCGTGCCAACGTaGCTGCCCGGAAGAACACCC +
Preference number: 4 (lower is better)
Translates to: SGVSVWGQGYGQKKDDKGPTVPT*LPGRTP
Trigger: GGGTGTTCTTCCGGGCAGGCACGTTGGCACGGTTGG...CCCTTTGTCATCTTTCTTCTGCCCATAACCCTGTCCCCACACACTTACCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GAAGGGGCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCCCAACCGTGCCAACGTaGCTGCCCGGAAGAACACCC +
Preference number: 4 (lower is better)
Translates to: EGAFYFLTSIRSTGRAQPPTVPT*LPGRTP
Trigger: GGGTGTTCTTCCGGGCAGGCACGTTGGCACGGTTGG...GGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGCCCCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCTTCTTGATGTTCTTCTaGACACAGCGAATGGCCAGG +
Preference number: 4 (lower is better)
Translates to: SLERLCFAHLCRVELSDAFLMFF*TQRMAR
Trigger: CCTGGCCATTCGCTGTGTGCAGAAGAACATCAAGAA...GGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCTTCTTGATGTTCTTCTaGACACAGCGAATGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRFLMFF*TQRMAR
Trigger: CCTGGCCATTCGCTGTGTGCAGAAGAACATCAAGAA...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCAGCTTGCTGCGCAGCTaGTGGATCTCCTCGTCTTTG +
Preference number: 4 (lower is better)
Translates to: RKPRCFPCRSAVRWGQWCSLLRS*WISSSL
Trigger: CAAAGACGAGGAGATCCAGCAGCTGCGCAGCAAGCT...GCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGGCAGGCAGAGCTGGAAGCCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTTCCATCACCTCCATCTaGTTCTTCAGTGCGTCATAC +
Preference number: 4 (lower is better)
Translates to: RQAELEAAGGCRWKRSALSITSI*FFSASY
Trigger: GTATGACGCACTGAAGAAGCAGATGGAGGTGATGGA...AAGAGCTGATCTCTTCCACCTGCACCCACCCGCGGCTTCCAGCTCTGCCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCATCCATCACCTCCATCTaGTTCTTCAGTGCGTCATAC +
Preference number: 4 (lower is better)
Translates to: FGETLLRPPLPRGAVRRPSITSI*FFSASY
Trigger: GTATGACGCACTGAAGAAGCAGATGGAGGTGATGGA...TGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TCTGGGGTAAGTGTGTGGGGACAGGGTTATGGGCAGAAGAAAGATGACAAAGGGAGCCGCCTCTCCAGCTaGCTCCTGCTCTGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: SGVSVWGQGYGQKKDDKGSRLSS*LLLCCS
Trigger: GGAACAGCAGAGCAGGAGGCAGCTGGAGAGGCGGCT...CCCTTTGTCATCTTTCTTCTGCCCATAACCCTGTCCCCACACACTTACCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCACTCTCATCACTATCTaGTTGCAGGTCCCCAAGCCG +
Preference number: 4 (lower is better)
Translates to: SNGRREGGWQTGPAPGTATLITI*LQVPKP
Trigger: CGGCTTGGGGACCTGCAAGCAGATAGTGATGAGAGT...GGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCTTGAGCTGCTGCAGTaGCCGTTGACTCTCATCACT +
Preference number: 4 (lower is better)
Translates to: KAKVFSMQIGSQVGAVVPLELLQ*PLTLIT
Trigger: AGTGATGAGAGTCAACGGGCACTGCAGCAGCTCAAG...GGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCTCTTGAGCTGCTGCAGTaGCCGTTGACTCTCATCACT +
Preference number: 4 (lower is better)
Translates to: AMAEGKGDGKQVQHQVLPLELLQ*PLTLIT
Trigger: AGTGATGAGAGTCAACGGGCACTGCAGCAGCTCAAG...AGGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TCTGGGGTAAGTGTGTGGGGACAGGGTTATGGGCAGAAGAAAGATGACAAAGGGTCGTGGTTTCGGACCTaGTGGCCCTCCAGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: SGVSVWGQGYGQKKDDKGSWFRT*WPSRCS
Trigger: GCTGCACCTGGAGGGCCAGCAGGTCCGAAACCACGA...CCCTTTGTCATCTTTCTTCTGCCCATAACCCTGTCCCCACACACTTACCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCTTTTCCTCCATTTGCTaGTTCAAGCTGAAAGCCTCA +
Preference number: 4 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSFSSIC*FKLKAS
Trigger: TGAGGCTTTCAGCTTGAAGCAGCAAATGGAGGAAAA...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCTCCAAGTCCCGGAGCTaGTTCTTGACCTTGGCCAGA +
Preference number: 4 (lower is better)
Translates to: RKPRCFPCRSAVRWGQWCSKSRS*FLTLAR
Trigger: TCTGGCCAAGGTCAAGAAGCAGCTCCGGGACTTGGA...GCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCTAGACGCAGCTTGGCCTaGTCCAGCATCTGTATACTC +
Preference number: 4 (lower is better)
Translates to: AMAEGKGDGKQVQHQVLPRRSLA*SSICIL
Trigger: GAGTATACAGATGCTGGAGCAGGCCAAGCTGCGTCT...AGGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTTACTCCTCCTCGAGCTaGACTTCCATCTGTTTTAAC +
Preference number: 4 (lower is better)
Translates to: CFAHLCRVELSDAHSLESYSSSS*TSICFN
Trigger: GTTAAAACAGATGGAAGTGCAGCTCGAGGAGGAGTA...ACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGCAGGAGGCTGAGATGGAGGTCCACCACCGGCTCCATGGAATGCCAGGCCACCTACTCCTCCTCGAGCTaGACTTCCATCTGTTTTAAC +
Preference number: 4 (lower is better)
Translates to: SRRLRWRSTTGSMECQATYSSSS*TSICFN
Trigger: GTTAAAACAGATGGAAGTGCAGCTCGAGGAGGAGTA...GGTGGCCTGGCATTCCATGGAGCCGGTGGTGGACCTCCATCTCAGCCTCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCTGCCTTTACAGCTGCTaGACAGGTGAATTCCGACTC +
Preference number: 4 (lower is better)
Translates to: KPRCFPCRSAVRWGQWCPCLYSC*TGEFRL
Trigger: GAGTCGGAATTCACCTGTGCAGCAGCTGTAAAGGCA...GGGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGTGCCTTTACAGCTGCTaGACAGGTGAATTCCGACTC +
Preference number: 4 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQCLYSC*TGEFRL
Trigger: GAGTCGGAATTCACCTGTGCAGCAGCTGTAAAGGCA...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCGCGATGTCATCAATCTaGAGGTGCAGGTCTTCCATC +
Preference number: 4 (lower is better)
Translates to: KPRCFPCRSAVRWGQWCPAMSSI*RCRSSI
Trigger: GATGGAAGACCTGCACCTGCAGATTGATGACATCGC...GGGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGAGCCACAGCTGCCTTGTaGTTCTTCATCAGCTCATTC +
Preference number: 4 (lower is better)
Translates to: ALFGETLLRPPLPRGAVRATAAL*FFISSF
Trigger: GAATGAGCTGATGAAGAAGCACAAGGCAGCTGTGGC...TCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCGCCACAGCTGCCTTGTaGTTCTTCATCAGCTCATTC +
Preference number: 4 (lower is better)
Translates to: KPRCFPCRSAVRWGQWCPATAAL*FFISSF
Trigger: GAATGAGCTGATGAAGAAGCACAAGGCAGCTGTGGC...GGGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp ACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACGGCCTGGGCCACAGCTaGCTTGTGCTTCTTCATCAG +
Preference number: 4 (lower is better)
Translates to: TKQWQKGRGMANRSSTRYGLGHS*LVLLHQ
Trigger: CTGATGAAGAAGCACAAGGCAGCTGTGGCCCAGGCC...GTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCAACTCCACCTGGCTCTaGAGAGCTTGTAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: KAKVFSMQIGSQVGAVVPNSTWL*RACSFS
Trigger: GGAGAAGCTACAAGCTCTGCAGAGCCAGGTGGAGTT...GGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCTCCATCTCCAGTTCATaGTTCTTGCGGCTAGCCTCG +
Preference number: 4 (lower is better)
Translates to: KAKVFSMQIGSQVGAVVPSISSS*FLRLAS
Trigger: CGAGGCTAGCCGCAAGAAGCATGAACTGGAGATGGA...GGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCAGCTTTAGGTCGGCTTaGAGGCTTTGGTTAGCAGCT +
Preference number: 4 (lower is better)
Translates to: KPRCFPCRSAVRWGQWCPSFRSA*RLWLAA
Trigger: AGCTGCTAACCAAAGCCTGCAAGCCGACCTAAAGCT...GGGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCTCCTCAATGGCAGCTTaGAAGTCCCCAATGCGTTTG +
Preference number: 4 (lower is better)
Translates to: KPRCFPCRSAVRWGQWCPSSMAA*KSPMRL
Trigger: CAAACGCATTGGGGACTTGCAAGCTGCCATTGAGGA...GGGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCATCGTCAGAAGGTaGCTTAGAAGGTCCCTTGTT +
Preference number: 4 (lower is better)
Translates to: LSLERLCFAHLCRVELSDAIVRR*LRRSLV
Trigger: AACAAGGGACCTTCTAAGGCACCTTCTGACGATGGC...GTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGGCCATCGTCAGAAGGTaGCTTAGAAGGTCCCTTGTT +
Preference number: 4 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQAIVRR*LRRSLV
Trigger: AACAAGGGACCTTCTAAGGCACCTTCTGACGATGGC...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCATTTGGATTTCTTCTTaGTCTTCCGAGAGCGCCCTT +
Preference number: 4 (lower is better)
Translates to: LWRDSASPTSAAWSCQTPIWISS*SSESAL
Trigger: AAGGGCGCTCTCGGAAGAGCAAGAAGAAATCCAAAT...GGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS-3UTR CCA 90 bp CCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTAAATAACTGCTCATTGCACAGGATGGCTCCGTCATaGTCCAGCTTCACACGCGCC +
Preference number: 4 (lower is better)
Translates to: PRVGAGGRDQLLNNCSLHRMAPS*SSFTRA
Trigger: GGCGCGTGTGAAGCTGGACCATGACGGAGCCATCCT...GTGCAATGAGCAGTTATTTAAGAGCTGATCTCTTCCACCTGCACCCACCCGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACTACCCAGAAGGACAATaGACTGGTCCTGACGACTCA +
Preference number: 4 (lower is better)
Translates to: LSLERLCFAHLCRVELSDYPEGQ*TGPDDS
Trigger: TGAGTCGTCAGGACCAGTCCATTGTCCTTCTGGGTA...GTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GAGTACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGCCACTGAGAACACCTTaGTCCCACTGGTACCCGCGA +
Preference number: 4 (lower is better)
Translates to: EYKAMAEGKGDGKQVQHQPLRTP*SHWYPR
Trigger: TCGCGGGTACCAGTGGGACCAAGGTGTTCTCAGTGG...CTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGTACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp ACAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCAAGTGGTTCAGGTaGAGCTCTGTCCTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: TESQGVFHADRQSGGGSGAKWFR*SSVLRV
Trigger: CACCCTCAGGACAGAGCTCCACCTGAACCACTTGGC...ACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCCTCAGGCTTGGACAGTaGCACAATTCCAAACACATT +
Preference number: 4 (lower is better)
Translates to: AAWSCQTPTAWKVPLTESLRLGQ*HNSKHI
Trigger: AATGTGTTTGGAATTGTGCCACTGTCCAAGCCTGAG...GCTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGAACCTTCATGGCAGCCTaGAGCTTACTGAACTGCTGT +
Preference number: 4 (lower is better)
Translates to: ALFGETLLRPPLPRGAVRTFMAA*SLLNCC
Trigger: ACAGCAGTTCAGTAAGCTCCAGGCTGCCATGAAGGT...TCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACACCTTCATGGCAGCCTaGAGCTTACTGAACTGCTGT +
Preference number: 4 (lower is better)
Translates to: LSLERLCFAHLCRVELSDTFMAA*SLLNCC
Trigger: ACAGCAGTTCAGTAAGCTCCAGGCTGCCATGAAGGT...GTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCAGTGCCTCCTTTTAGCTaGTGTTTGAAGATAGCCGAG +
Preference number: 4 (lower is better)
Translates to: FGETLLRPPLPRGAVRRPVPPFS*CLKIAE
Trigger: CTCGGCTATCTTCAAACACCAGCTAAAAGGAGGCAC...TGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAGTGCCTCCTTTTAGCTaGTGTTTGAAGATAGCCGAG +
Preference number: 4 (lower is better)
Translates to: SAAWSCQTPTAWKVPLTEVPPFS*CLKIAE
Trigger: CTCGGCTATCTTCAAACACCAGCTAAAAGGAGGCAC...TTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TCTGGGGTAAGTGTGTGGGGACAGGGTTATGGGCAGAAGAAAGATGACAAAGGGCCTGACGGAAGGAGGTaGACCGTTGCAGGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: SGVSVWGQGYGQKKDDKGPDGRR*TVAGCL
Trigger: GAGGCACCCTGCAACGGTCCACCTCCTTCCGTCAGG...CCCTTTGTCATCTTTCTTCTGCCCATAACCCTGTCCCCACACACTTACCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTAAATAACTGCTCATTGCACAGGAAGGTGCGCTCGTaGAACAGCCTCTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: PRVGAGGRDQLLNNCSLHRKVRS*NSLCSL
Trigger: CAGGCTGCAGAGGCTGTTCCACGAGCGCACCTTCCT...GTGCAATGAGCAGTTATTTAAGAGCTGATCTCTTCCACCTGCACCCACCCGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCTATCTCTCCAACTCCTaGAGGAAGGTGCGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: RKPRCFPCRSAVRWGQWCYLSNS*RKVRSW
Trigger: CCACGAGCGCACCTTCCTCCAGGAGTTGGAGAGATA...GCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGTATCTCTCCAACTCCTaGAGGAAGGTGCGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: QKAKVFSMQIGSQVGAVVYLSNS*RKVRSW
Trigger: CCACGAGCGCACCTTCCTCCAGGAGTTGGAGAGATA...CACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGAGGAGTCATCTGCAACTaGCTCCAAGTCATCAAACGC +
Preference number: 4 (lower is better)
Translates to: ALFGETLLRPPLPRGAVRGVICN*LQVIKR
Trigger: GCGTTTGATGACTTGGAGCCAGTTGCAGATGACTCC...TCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp ACAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTACCCAGTTGGTACCGTaGCTGTGGCCCAGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: TESQGVFHADRQSGGGSGTQLVP*LWPRRK
Trigger: CTTTCTCCTGGGCCACAGCCACGGTACCAACTGGGT...ACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCTGGCTGGGTTCTGCTTaGTGTAATTCAGCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: KAKVFSMQIGSQVGAVVPWLGSA*CNSASQ
Trigger: CTGGCTGGCTGAATTACACCAAGCAGAACCCAGCCA...GGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCTTGGCTGGGTTCTGCTTaGTGTAATTCAGCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: AMAEGKGDGKQVQHQVLPWLGSA*CNSASQ
Trigger: CTGGCTGGCTGAATTACACCAAGCAGAACCCAGCCA...AGGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGTACAAAGCAATGCGGCGCAAGGCCAGCTaGGAGCCACCTTCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: LTSIRSTGRAQPNEYKAMRRKAS*EPPSRP
Trigger: AGGCCTGGAAGGTGGCTCCCAGCTGGCCTTGCGCCG...CATTGCTTTGTACTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCAAAACACCATGTGGTCTaGGTAACCTTGGCGGTACAT +
Preference number: 4 (lower is better)
Translates to: FGETLLRPPLPRGAVRRPKHHVV*VTLAVH
Trigger: ATGTACCGCCAAGGTTACCCAGACCACATGGTGTTT...TGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCAAACACCATGTGGTCTaGGTAACCTTGGCGGTACAT +
Preference number: 4 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRKHHVV*VTLAVH
Trigger: ATGTACCGCCAAGGTTACCCAGACCACATGGTGTTT...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGATTTCTTGGTCAGGTGTaGAGCCAGGACATCAAAGCG +
Preference number: 4 (lower is better)
Translates to: ALFGETLLRPPLPRGAVRFLGQV*SQDIKA
Trigger: CGCTTTGATGTCCTGGCTCCACACCTGACCAAGAAA...TCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCTTTCTTGGTCAGGTGTaGAGCCAGGACATCAAAGCG +
Preference number: 4 (lower is better)
Translates to: KPRCFPCRSAVRWGQWCPFLGQV*SQDIKA
Trigger: CGCTTTGATGTCCTGGCTCCACACCTGACCAAGAAA...GGGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGTTTCTTGGTCAGGTGTaGAGCCAGGACATCAAAGCG +
Preference number: 4 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQFLGQV*SQDIKA
Trigger: CGCTTTGATGTCCTGGCTCCACACCTGACCAAGAAA...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCTTCTGCACACAGCGAATaGCCAGGTCCTGGATCTTTC +
Preference number: 4 (lower is better)
Translates to: AMAEGKGDGKQVQHQVLPSAHSE*PGPGSF
Trigger: GAAAGATCCAGGACCTGGCCATTCGCTGTGTGCAGA...AGGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGTACAAAGCAATGTCCGCGTCCAGCAGCTaGGAGGCGGACTCTCCCGTG +
Preference number: 4 (lower is better)
Translates to: LTSIRSTGRAQPNEYKAMSASSS*EADSPV
Trigger: CACGGGAGAGTCCGCCTCCCAGCTGCTGGACGCGGA...CATTGCTTTGTACTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp ACAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTTTCTTCTCCAGCTCGTaGTTTCGGACCTGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: TESQGVFHADRQSGGGSGFFSSS*FRTCWP
Trigger: GGGCCAGCAGGTCCGAAACCACGAGCTGGAGAAGAA...ACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCATCCATCTCCTTGGAATaGGTCTGTCTCATTCTCTCC +
Preference number: 4 (lower is better)
Translates to: FGETLLRPPLPRGAVRRPSISLE*VCLILS
Trigger: GGAGAGAATGAGACAGACCCATTCCAAGGAGATGGA...TGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGAAGTGAAGATGGAGGGGAGATTCCCAAGGCATCCCACAGGCCCCAGCTGCAGGATTCAAAGTCCCGCTaGTTCACCTGGTCACTGAGC +
Preference number: 4 (lower is better)
Translates to: RSEDGGEIPKASHRPQLQDSKSR*FTWSLS
Trigger: GCTCAGTGACCAGGTGAACCAGCGGGACTTTGAATC...CTGCAGCTGGGGCCTGTGGGATGCCTTGGGAATCTCCCCTCCATCTTCACTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCGATTCAAAGTCCCGCTaGTTCACCTGGTCACTGAGC +
Preference number: 4 (lower is better)
Translates to: SNGRREGGWQTGPAPGTADSKSR*FTWSLS
Trigger: GCTCAGTGACCAGGTGAACCAGCGGGACTTTGAATC...GGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp ACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACCTGCCAGCAGCGCTTTaGTGCGCTTCAGGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: TKQWQKGRGMANRSSTRYLPAAL*CASGLS
Trigger: GGAAAGACCTGAAGCGCACCAAAGCGCTGCTGGCAG...GTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTGCATTGTTCTTTAAGTaGTCCAGCATGATCTGGGCA +
Preference number: 4 (lower is better)
Translates to: CFAHLCRVELSDAHSLESALFFK*SSMIWA
Trigger: TGCCCAGATCATGCTGGACCACTTAAAGAACAATGC...ACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCAGCTGGTTCTTCAGCTaGGCAATCTCCCTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: KAKVFSMQIGSQVGAVVPSWFFS*AISLLL
Trigger: GAGCAAGAGGGAGATTGCCCAGCTGAAGAACCAGCT...GGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCTTCCGACTCTTCCAGCTaGTTCTTCAGCTGGGCAATC +
Preference number: 4 (lower is better)
Translates to: AMAEGKGDGKQVQHQVLPSDSSS*FFSWAI
Trigger: GATTGCCCAGCTGAAGAACCAGCTGGAAGAGTCGGA...AGGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCCTCCAGCGCTGTCTTaGCTTTGGCGATGTCATCAA +
Preference number: 4 (lower is better)
Translates to: KAKVFSMQIGSQVGAVVPPPALS*LWRCHQ
Trigger: TTGATGACATCGCCAAAGCCAAGACAGCGCTGGAGG...GGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCTCCTCCAGCGCTGTCTTaGCTTTGGCGATGTCATCAA +
Preference number: 4 (lower is better)
Translates to: AMAEGKGDGKQVQHQVLPPPALS*LWRCHQ
Trigger: TTGATGACATCGCCAAAGCCAAGACAGCGCTGGAGG...AGGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCCTTGCTTCTCCTTGTTaGACTCTTCAATCTGAGCCT +
Preference number: 4 (lower is better)
Translates to: LWRDSASPTSAAWSCQTPLASPC*TLQSEP
Trigger: AGGCTCAGATTGAAGAGTCCAACAAGGAGAAGCAAG...GGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGCAGGAGGCTGAGATGGAGGTCCACCACCGGCTCCATGGAATGCCAGGCCACCCTTGCTTCTCCTTGTTaGACTCTTCAATCTGAGCCT +
Preference number: 4 (lower is better)
Translates to: SRRLRWRSTTGSMECQATLASPC*TLQSEP
Trigger: AGGCTCAGATTGAAGAGTCCAACAAGGAGAAGCAAG...GGTGGCCTGGCATTCCATGGAGCCGGTGGTGGACCTCCATCTCAGCCTCCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGTCCAGGAACTCCACCTaGCTCTGCAGAGCTTGTAGC +
Preference number: 4 (lower is better)
Translates to: QKAKVFSMQIGSQVGAVVSRNST*LCRACS
Trigger: GCTACAAGCTCTGCAGAGCCAGGTGGAGTTCCTGGA...CACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCGCTCATCTCCTCCTTaGTGTCACGAAGCTGTCGCT +
Preference number: 4 (lower is better)
Translates to: QKAKVFSMQIGSQVGAVVRSSPP*CHEAVA
Trigger: AGCGACAGCTTCGTGACACCAAGGAGGAGATGAGCG...CACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCTCGGCTTGCAGGCTTTaGTTAGCAGCTTCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: RKPRCFPCRSAVRWGQWCSACRL*LAASRL
Trigger: GAGCCTGGAAGCTGCTAACCAAAGCCTGCAAGCCGA...GCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACCATCTCATCCTCAATaGCAGCTTGCAAGTCCCCAA +
Preference number: 4 (lower is better)
Translates to: ALFGETLLRPPLPRGAVRPSHPQ*QLASPQ
Trigger: TTGGGGACTTGCAAGCTGCCATTGAGGATGAGATGG...TCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCAGTGGCTGGTTGGGCTaGAACTCTTCAAGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: KAKVFSMQIGSQVGAVVPSGWLG*NSSSCH
Trigger: ATGGCAGCTTGAAGAGTTCCAGCCCAACCAGCCACT...GGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGTGGTCTCTGTCAGCTTaGCCTCTGTGTCGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: QKAKVFSMQIGSQVGAVVWSLSA*PLCRCH
Trigger: GTGACAGCGACACAGAGGCCAAGCTGACAGAGACCA...CACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCTGGTCTCTGTCAGCTTaGCCTCTGTGTCGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: RKPRCFPCRSAVRWGQWCWSLSA*PLCRCH
Trigger: GTGACAGCGACACAGAGGCCAAGCTGACAGAGACCA...GCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AACCGGGGTCTGGAGATGCTGTCCACAGGATCATGCTCATCATCCGATGGGTCAAGGAACCTTCTGAGCTaGAGGAGCTGGAGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: NRGLEMLSTGSCSSSDGSRNLLS*RSWSWS
Trigger: GCTCCAGCTCCAGCTCCTCCAGCTCAGAAGGTTCCT...TGACCCATCGGATGATGAGCATGATCCTGTGGACAGCATCTCCAGACCCCGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS-3UTR CCA 90 bp GGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACCTGAGGGTACCGGGCTaGTGGCAGGCTGAGGACTCC +
Preference number: 4 (lower is better)
Translates to: GLQSDKQTKTSTFHCAHHLRVPG*WQAEDS
Trigger: GGAGTCCTCAGCCTGCCACCAGCCCGGTACCCTCAG...GTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000167856.8
CDS-3UTR TCA 90 bp AAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCCGTTTGACAATCATCTaGGAGTTCTGCTTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: KPRCFPCRSAVRWGQWCPRLTII*EFCLAS
Trigger: ACTGGCCAAGCAGAACTCTCAGATGATTGTCAAACG...GGGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR TCA 90 bp ACAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGTGCATCACCTTCTCTaGATACACAGCAGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: TESQGVFHADRQSGGGSGVHHLL*IHSRSP
Trigger: GGGGCTCCTGCTGTGTATTCAGAGAAGGTGATGCAC...ACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCTACTGCACCAGATGCTaGAAGCTGGTAGTCTTGCCA +
Preference number: 4 (lower is better)
Translates to: SNGRREGGWQTGPAPGTAYCTRC*KLVVLP
Trigger: TGGCAAGACTACCAGCTTTCAGCATCTGGTGCAGTA...GGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp ACAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTTGGCACTGCCATTCATaGTGGTGGGGCTGTTCCCAA +
Preference number: 4 (lower is better)
Translates to: TESQGVFHADRQSGGGSGWHCHS*WWGCSQ
Trigger: TTGGGAACAGCCCCACCATCATGAATGGCAGTGCCA...ACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp GCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGGCCTGCAATCGAGCCTaGGAGCACCGTGGCACTGCC +
Preference number: 4 (lower is better)
Translates to: AFYFLTSIRSTGRAQPNEACNRA*EHRGTA
Trigger: GGCAGTGCCACGGTGCTCTCAGGCTCGATTGCAGGC...CTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCGGATCTTTCTCTTCTTaGAGTGCTGGCGGGCAAGGT +
Preference number: 4 (lower is better)
Translates to: RKPRCFPCRSAVRWGQWCGSFSS*SAGGQG
Trigger: ACCTTGCCCGCCAGCACTTCAAGAAGAGAAAGATCC...GCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCTCGGATCTGCTCCTCTaGCAGCTGAACTTGGATGAG +
Preference number: 4 (lower is better)
Translates to: RKPRCFPCRSAVRWGQWCSDLLL*QLNLDE
Trigger: CTCATCCAAGTTCAGCTGTCAGAGGAGCAGATCCGA...GCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp TCTGGGGTAAGTGTGTGGGGACAGGGTTATGGGCAGAAGAAAGATGACAAAGGGTCTCGGCTGCCCGAATaGGCCGGGCTTCCATCACTT +
Preference number: 4 (lower is better)
Translates to: SGVSVWGQGYGQKKDDKGSRLPE*AGLPSL
Trigger: AAGTGATGGAAGCCCGGCTCATTCGGGCAGCCGAGA...CCCTTTGTCATCTTTCTTCTGCCCATAACCCTGTCCCCACACACTTACCCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp TCTGGGGTAAGTGTGTGGGGACAGGGTTATGGGCAGAAGAAAGATGACAAAGGGGGAGCCGCTTCTTGGTaGAGTCCACCTCCCGAACAG +
Preference number: 4 (lower is better)
Translates to: SGVSVWGQGYGQKKDDKGGAASW*SPPPEQ
Trigger: CTGTTCGGGAGGTGGACTTCACCAAGAAGCGGCTCC...CCCTTTGTCATCTTTCTTCTGCCCATAACCCTGTCCCCACACACTTACCCCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGTGCTGCAGTGCCCGTTaGCTCTCATCACTATCTGCT +
Preference number: 4 (lower is better)
Translates to: QKAKVFSMQIGSQVGAVVCCSAR*LSSLSA
Trigger: AGCAGATAGTGATGAGAGTCAACGGGCACTGCAGCA...CACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGTTTGGCACTTCTTCTTaGGCTGCTGCAGTGCCCGTT +
Preference number: 4 (lower is better)
Translates to: QKAKVFSMQIGSQVGAVVFGTSS*AAAVPV
Trigger: AACGGGCACTGCAGCAGCTCAAGAAGAAGTGCCAAA...CACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCTTTGCTGCTTCAAGCTaGAAGCCTCAGCCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: RKPRCFPCRSAVRWGQWCFAASS*KPQPGA
Trigger: TGCTCCTGGCTGAGGCTTTCAGCTTGAAGCAGCAAA...GCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp TCTGGGGTAAGTGTGTGGGGACAGGGTTATGGGCAGAAGAAAGATGACAAAGGGCCTCTTCCTGGTCCTTaGCCTTGGCCTCCAAGTCCC +
Preference number: 4 (lower is better)
Translates to: SGVSVWGQGYGQKKDDKGPLPGP*PWPPSP
Trigger: GGGACTTGGAGGCCAAGGTCAAGGACCAGGAAGAGG...CCCTTTGTCATCTTTCTTCTGCCCATAACCCTGTCCCCACACACTTACCCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGTGTTTTAACTTCTTCTaGCATGACTGCCGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQCFNFF*HDCRAS
Trigger: AGAGGCCCGGCAGTCATGTCAGAAGAAGTTAAAACA...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp GCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGATGTTTTAACTTCTTCTaGCATGACTGCCGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: ALFGETLLRPPLPRGAVRCFNFF*HDCRAS
Trigger: AGAGGCCCGGCAGTCATGTCAGAAGAAGTTAAAACA...TCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACTCTTCCAGCCGGTTTTaGATCTCGTTTTTCTCACGC +
Preference number: 4 (lower is better)
Translates to: LSLERLCFAHLCRVELSDSSSRF*ISFFSR
Trigger: GCGTGAGAAAAACGAGATTCAAAACCGGCTGGAAGA...GTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp TCTGGGGTAAGTGTGTGGGGACAGGGTTATGGGCAGAAGAAAGATGACAAAGGGTCGCTTCCTGCCTGCTaGCGAGGGACTTGTCCACCA +
Preference number: 4 (lower is better)
Translates to: SGVSVWGQGYGQKKDDKGSLPAC*RGTCPP
Trigger: TGGTGGACAAGTCCCTCGTCAGCAGGCAGGAAGCGA...CCCTTTGTCATCTTTCTTCTGCCCATAACCCTGTCCCCACACACTTACCCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp GAAGGGGCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCGTGTCTCCAGCTCCCTaGTCTTCGCTTCCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: EGAFYFLTSIRSTGRAQPVSPAP*SSLPAC
Trigger: GCAGGCAGGAAGCGAAGATCAGGGAGCTGGAGACAC...GGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGCCCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGTCTCCATGGTTTCTTTaGGCCGACTGGCCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: QKAKVFSMQIGSQVGAVVSPWFL*ADWPGS
Trigger: AGAACCTGGCCAGTCGGCTCAAAGAAACCATGGAGA...CACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGACAGGTACCGCATCATaGGGCTGTCGACCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: QKAKVFSMQIGSQVGAVVTGTAS*GCRPLS
Trigger: AGAAAGAGGTCGACAGCCTCATGATGCGGTACCTGT...CACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS-3UTR GCA 90 bp CCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTAAATAACTGCTCATTGCACTCAATGTCCGTCAGGTaGAGGTCAGAGCCACTGGCC +
Preference number: 4 (lower is better)
Translates to: PRVGAGGRDQLLNNCSLHSMSVR*RSEPLA
Trigger: GGCCAGTGGCTCTGACCTGCACCTGACGGACATTGA...GTGCAATGAGCAGTTATTTAAGAGCTGATCTCTTCCACCTGCACCCACCCGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
CDS-3UTR GCA 90 bp ACAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGATCCAGCATGGTTGTaGGCCGCAGTGAGAAGCCAA +
Preference number: 4 (lower is better)
Translates to: TESQGVFHADRQSGGGSGDPAWL*AAVRSQ
Trigger: TTGGCTTCTCACTGCGGCGCACAACCATGCTGGATC...ACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR GCA 90 bp AAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCACACTGTCCCCAGACTaGCGGATCATCTCCACAATT +
Preference number: 4 (lower is better)
Translates to: KAKVFSMQIGSQVGAVVPTLSPD*RIISTI
Trigger: AATTGTGGAGATGATCCGGCAGTCTGGGGACAGTGT...GGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR GCA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCACCCCTTGAACATGTaGATCACCTTCTCTGAATAC +
Preference number: 4 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRHPLNM*ITFSEY
Trigger: GTATTCAGAGAAGGTGATGCACATGTTCAAGGGGTG...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACCCCTTGAACATGTaGATCACCTTCTCTGAATAC +
Preference number: 4 (lower is better)
Translates to: SLERLCFAHLCRVELSDAHPLNM*ITFSEY
Trigger: GTATTCAGAGAAGGTGATGCACATGTTCAAGGGGTG...GGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCTCAACATCGCCCTATATaGAGTCTGGGCTACAGCGTA +
Preference number: 4 (lower is better)
Translates to: AMAEGKGDGKQVQHQVLPQHRPI*SLGYSV
Trigger: TACGCTGTAGCCCAGACTGCATATAGGGCGATGTTG...AGGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GAGTACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGTGCTGTGCAGCCTTCTaGTTCTCCTCAGGCTTGGAC +
Preference number: 4 (lower is better)
Translates to: EYKAMAEGKGDGKQVQHQCCAAF*FSSGLD
Trigger: GTCCAAGCCTGAGGAGAAGCAGAAGGCTGCACAGCA...CTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGTACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp ACAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTTGCTGTGCAGCCTTCTaGTTCTCCTCAGGCTTGGAC +
Preference number: 4 (lower is better)
Translates to: TESQGVFHADRQSGGGSGCCAAF*FSSGLD
Trigger: GTCCAAGCCTGAGGAGAAGCAGAAGGCTGCACAGCA...ACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCTCTTACTGAACTGCTGTaGAGCCTTCTGCTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: AMAEGKGDGKQVQHQVLPLTELL*SLLLLL
Trigger: GAGGAGAAGCAGAAGGCTGCACAGCAGTTCAGTAAG...AGGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCTGGAGAAGTGAAGATGGAGGGGAGATTCCCAAGGCATCCCACAGGCCCCAGTGGAGCTTACTGAACTaGTGTGCAGCCTTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: LWRSEDGGEIPKASHRPQWSLLN*CAAFCF
Trigger: GAAGCAGAAGGCTGCACAGCAGTTCAGTAAGCTCCA...CTGGGGCCTGTGGGATGCCTTGGGAATCTCCCCTCCATCTTCACTTCTCCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp ACAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTAAGGAGGTGGACCGTTaGAGGGTGCCTCCTTTTAGC +
Preference number: 4 (lower is better)
Translates to: TESQGVFHADRQSGGGSGKEVDR*RVPPFS
Trigger: GCTAAAAGGAGGCACCCTGCAACGGTCCACCTCCTT...ACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp ACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAATGAGGGCATCTACTTaGAGCTTAATCTGTATGCAC +
Preference number: 4 (lower is better)
Translates to: TSAAWSCQTPTAWKVPLTMRAST*SLICMH
Trigger: GTGCATACAGATTAAGCTGCAAGTAGATGCCCTCAT...TGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAAGCAGTGCACGAAATaGATCTTGGACCTCTTGATG +
Preference number: 4 (lower is better)
Translates to: SAAWSCQTPTAWKVPLTEKQCTK*ILDLLM
Trigger: CATCAAGAGGTCCAAGATGCATTTCGTGCACTGCTT...TTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCAAAGCAGTGCACGAAATaGATCTTGGACCTCTTGATG +
Preference number: 4 (lower is better)
Translates to: FGETLLRPPLPRGAVRRPKQCTK*ILDLLM
Trigger: CATCAAGAGGTCCAAGATGCATTTCGTGCACTGCTT...TGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACAGGAAGGAAGCAGTaGACGAAATGCATCTTGGAC +
Preference number: 4 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQTGRKQ*TKCILD
Trigger: GTCCAAGATGCATTTCGTGCACTGCTTCCTTCCTGT...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGAACAGGAAGGAAGCAGTaGACGAAATGCATCTTGGAC +
Preference number: 4 (lower is better)
Translates to: ALFGETLLRPPLPRGAVRTGRKQ*TKCILD
Trigger: GTCCAAGATGCATTTCGTGCACTGCTTCCTTCCTGT...TCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GAGTACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGTGGAACAGGGTCAGGTaGCTGCTGGTTTGCTCGTCT +
Preference number: 4 (lower is better)
Translates to: EYKAMAEGKGDGKQVQHQWNRVR*LLVCSS
Trigger: AGACGAGCAAACCAGCAGGCACCTGACCCTGTTCCA...CTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGTACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp ACAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTTGGAACAGGGTCAGGTaGCTGCTGGTTTGCTCGTCT +
Preference number: 4 (lower is better)
Translates to: TESQGVFHADRQSGGGSGWNRVR*LLVCSS
Trigger: AGACGAGCAAACCAGCAGGCACCTGACCCTGTTCCA...ACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCTTCTTGATGTTCTTCTaGACACAGCGAATGGCCAGG +
Preference number: 4 (lower is better)
Translates to: KPRCFPCRSAVRWGQWCPFLMFF*TQRMAR
Trigger: CCTGGCCATTCGCTGTGTGCAGAAGAACATCAAGAA...GGGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGTTCTTGATGTTCTTCTaGACACAGCGAATGGCCAGG +
Preference number: 4 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQFLMFF*TQRMAR
Trigger: CCTGGCCATTCGCTGTGTGCAGAAGAACATCAAGAA...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp ACAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTAGCTTGCTGCGCAGCTaGTGGATCTCCTCGTCTTTG +
Preference number: 4 (lower is better)
Translates to: TESQGVFHADRQSGGGSGSLLRS*WISSSL
Trigger: CAAAGACGAGGAGATCCAGCAGCTGCGCAGCAAGCT...ACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACTCCATCACCTCCATCTaGTTCTTCAGTGCGTCATAC +
Preference number: 4 (lower is better)
Translates to: LSLERLCFAHLCRVELSDSITSI*FFSASY
Trigger: GTATGACGCACTGAAGAAGCAGATGGAGGTGATGGA...GTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACAGGCCCGTTGATCTCGGCTaGCCGAATGAGCCGGGCTTC +
Preference number: 4 (lower is better)
Translates to: LQSDKQTKTSTFHCAHHRPVDLG*PNEPGF
Trigger: GAAGCCCGGCTCATTCGGGCAGCCGAGATCAACGGG...CCTGTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTAAATAACTGCTCATTGCACTCTCCAGCTGCCTCCTaGTCTGCTGTTCCACCTCCA +
Preference number: 4 (lower is better)
Translates to: PRVGAGGRDQLLNNCSLHSPAAS*SAVPPP
Trigger: TGGAGGTGGAACAGCAGAGCAGGAGGCAGCTGGAGA...GTGCAATGAGCAGTTATTTAAGAGCTGATCTCTTCCACCTGCACCCACCCGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACAGCCGCCTCTCCAGCTaGCTCCTGCTCTGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: GLQSDKQTKTSTFHCAHHSRLSS*LLLCCS
Trigger: GGAACAGCAGAGCAGGAGGCAGCTGGAGAGGCGGCT...GTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GAGTACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGTGCAGCTTGGTGTCCTaGAGCTCAGCTGTGAGCCTT +
Preference number: 4 (lower is better)
Translates to: EYKAMAEGKGDGKQVQHQCSLVS*SSAVSL
Trigger: AAGGCTCACAGCTGAGCTGCAGGACACCAAGCTGCA...CTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGTACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp ACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACCTGTCGAACCTCCTCTaGTTCTTCTCCAGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: TKQWQKGRGMANRSSTRYLSNLL*FFSSSW
Trigger: CCACGAGCTGGAGAAGAAGCAGAGGAGGTTCGACAG...GTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGATTTTCCTCCATTTGCTaGTTCAAGCTGAAAGCCTCA +
Preference number: 4 (lower is better)
Translates to: LCRVELSDAHSLESPPDRFSSIC*FKLKAS
Trigger: TGAGGCTTTCAGCTTGAAGCAGCAAATGGAGGAAAA...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCTTTTCCTCCATTTGCTaGTTCAAGCTGAAAGCCTCA +
Preference number: 4 (lower is better)
Translates to: LWRDSASPTSAAWSCQTPFSSIC*FKLKAS
Trigger: TGAGGCTTTCAGCTTGAAGCAGCAAATGGAGGAAAA...GGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp ACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTCCAAGTCCCGGAGCTaGTTCTTGACCTTGGCCAGA +
Preference number: 4 (lower is better)
Translates to: TKQWQKGRGMANRSSTRYSKSRS*FLTLAR
Trigger: TCTGGCCAAGGTCAAGAAGCAGCTCCGGGACTTGGA...GTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp ACAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTTCCAAGTCCCGGAGCTaGTTCTTGACCTTGGCCAGA +
Preference number: 4 (lower is better)
Translates to: TESQGVFHADRQSGGGSGSKSRS*FLTLAR
Trigger: TCTGGCCAAGGTCAAGAAGCAGCTCCGGGACTTGGA...ACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCTACTCCTCCTCGAGCTaGACTTCCATCTGTTTTAAC +
Preference number: 4 (lower is better)
Translates to: SLERLCFAHLCRVELSDAYSSSS*TSICFN
Trigger: GTTAAAACAGATGGAAGTGCAGCTCGAGGAGGAGTA...GGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGAAGTGAAGATGGAGGGGAGATTCCCAAGGCATCCCACAGGCCCCAGCTGCAGGCCACAGCTGCCTTGTaGTTCTTCATCAGCTCATTC +
Preference number: 4 (lower is better)
Translates to: RSEDGGEIPKASHRPQLQATAAL*FFISSF
Trigger: GAATGAGCTGATGAAGAAGCACAAGGCAGCTGTGGC...CTGCAGCTGGGGCCTGTGGGATGCCTTGGGAATCTCCCCTCCATCTTCACTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCAACTCCACCTGGCTCTaGAGAGCTTGTAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: RKPRCFPCRSAVRWGQWCNSTWL*RACSFS
Trigger: GGAGAAGCTACAAGCTCTGCAGAGCCAGGTGGAGTT...GCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp ACAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTTTGTCCACCATGGACTaGTCCAGGAACTCCACCTGG +
Preference number: 4 (lower is better)
Translates to: TESQGVFHADRQSGGGSGLSTMD*SRNSTW
Trigger: CCAGGTGGAGTTCCTGGAGCAGTCCATGGTGGACAA...ACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCTCCATCTCCAGTTCATaGTTCTTGCGGCTAGCCTCG +
Preference number: 4 (lower is better)
Translates to: RKPRCFPCRSAVRWGQWCSISSS*FLRLAS
Trigger: CGAGGCTAGCCGCAAGAAGCATGAACTGGAGATGGA...GCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCAGCTTTAGGTCGGCTTaGAGGCTTTGGTTAGCAGCT +
Preference number: 4 (lower is better)
Translates to: KAKVFSMQIGSQVGAVVPSFRSA*RLWLAA
Trigger: AGCTGCTAACCAAAGCCTGCAAGCCGACCTAAAGCT...GGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCTAGCTTTAGGTCGGCTTaGAGGCTTTGGTTAGCAGCT +
Preference number: 4 (lower is better)
Translates to: AMAEGKGDGKQVQHQVLPSFRSA*RLWLAA
Trigger: AGCTGCTAACCAAAGCCTGCAAGCCGACCTAAAGCT...AGGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCTGGAGAAGTGAAGATGGAGGGGAGATTCCCAAGGCATCCCACAGGCCCCAGGCCATCGTCAGAAGGTaGCTTAGAAGGTCCCTTGTT +
Preference number: 4 (lower is better)
Translates to: LWRSEDGGEIPKASHRPQAIVRR*LRRSLV
Trigger: AACAAGGGACCTTCTAAGGCACCTTCTGACGATGGC...CTGGGGCCTGTGGGATGCCTTGGGAATCTCCCCTCCATCTTCACTTCTCCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGAAGTGAAGATGGAGGGGAGATTCCCAAGGCATCCCACAGGCCCCAGCTGCAGGCCATCGTCAGAAGGTaGCTTAGAAGGTCCCTTGTT +
Preference number: 4 (lower is better)
Translates to: RSEDGGEIPKASHRPQLQAIVRR*LRRSLV
Trigger: AACAAGGGACCTTCTAAGGCACCTTCTGACGATGGC...CTGCAGCTGGGGCCTGTGGGATGCCTTGGGAATCTCCCCTCCATCTTCACTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCGCCATCGTCAGAAGGTaGCTTAGAAGGTCCCTTGTT +
Preference number: 4 (lower is better)
Translates to: KAKVFSMQIGSQVGAVVPAIVRR*LRRSLV
Trigger: AACAAGGGACCTTCTAAGGCACCTTCTGACGATGGC...GGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GAAGGGGCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCCCAGTGAACCGAACTTaGCTGCCCGCTGCAGCACAG +
Preference number: 4 (lower is better)
Translates to: EGAFYFLTSIRSTGRAQPPVNRT*LPAAAQ
Trigger: CTGTGCTGCAGCGGGCAGCCAAGTTCGGTTCACTGG...GGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGCCCCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
CDS-3UTR CCA 90 bp AGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCTCTGAGAGTTCTGCTTaGCCAGTGAACCGAACTTGG +
Preference number: 4 (lower is better)
Translates to: SNGRREGGWQTGPAPGTASESSA*PVNRTW
Trigger: CCAAGTTCGGTTCACTGGCCAAGCAGAACTCTCAGA...GGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
CDS-3UTR CCA 90 bp GGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACGAGAGCAGGAGGTGGTaGTGGCACCAGAGCGGGAAG +
Preference number: 4 (lower is better)
Translates to: GLQSDKQTKTSTFHCAHHESRRW*WHQSGK
Trigger: CTTCCCGCTCTGGTGCCACCACCACCTCCTGCTCTC...GTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
CDS-3UTR CCA 90 bp CTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACAGGGGGCCCGATCCAGCATaGTTGTGCGCCGCAGTGAGA +
Preference number: 4 (lower is better)
Translates to: LQSDKQTKTSTFHCAHHRGPDPA*LCAAVR
Trigger: TCTCACTGCGGCGCACAACCATGCTGGATCGGGCCC...CCTGTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
CDS-3UTR CCA 90 bp GCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGCCAAGGCCAGGTCCTTaGTGCCTGCCCCTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: AFYFLTSIRSTGRAQPNEPRPGP*CLPLAQ
Trigger: CTGAGCCAGGGGCAGGCACCAAGGACCTGGCCTTGG...CTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
CDS-3UTR CCA 90 bp ACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACCAGCTCGCTAAGCTCTaGGATGGGCTGTACCTTGAG +
Preference number: 4 (lower is better)
Translates to: TKQWQKGRGMANRSSTRYQLAKL*DGLYLE
Trigger: CTCAAGGTACAGCCCATCCCAGAGCTTAGCGAGCTG...GTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
CDS-3UTR CCA 90 bp ACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACCATCCACATCCAGGATaGCTCCGTCATGGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: TKQWQKGRGMANRSSTRYHPHPG*LRHGPA
Trigger: AGCTGGACCATGACGGAGCCATCCTGGATGTGGATG...GTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCTGGAGAAGTGAAGATGGAGGGGAGATTCCCAAGGCATCCCACAGGCCCCAGTACCCAGAAGGACAATaGACTGGTCCTGACGACTCA +
Preference number: 4 (lower is better)
Translates to: LWRSEDGGEIPKASHRPQYPEGQ*TGPDDS
Trigger: TGAGTCGTCAGGACCAGTCCATTGTCCTTCTGGGTA...CTGGGGCCTGTGGGATGCCTTGGGAATCTCCCCTCCATCTTCACTTCTCCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCTACCCAGAAGGACAATaGACTGGTCCTGACGACTCA +
Preference number: 4 (lower is better)
Translates to: KAKVFSMQIGSQVGAVVPYPEGQ*TGPDDS
Trigger: TGAGTCGTCAGGACCAGTCCATTGTCCTTCTGGGTA...GGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGAAGTGAAGATGGAGGGGAGATTCCCAAGGCATCCCACAGGCCCCAGCTGCAGTACCCAGAAGGACAATaGACTGGTCCTGACGACTCA +
Preference number: 4 (lower is better)
Translates to: RSEDGGEIPKASHRPQLQYPEGQ*TGPDDS
Trigger: TGAGTCGTCAGGACCAGTCCATTGTCCTTCTGGGTA...CTGCAGCTGGGGCCTGTGGGATGCCTTGGGAATCTCCCCTCCATCTTCACTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCTCAGGCTTGGACAGTaGCACAATTCCAAACACATT +
Preference number: 4 (lower is better)
Translates to: SLERLCFAHLCRVELSDALRLGQ*HNSKHI
Trigger: AATGTGTTTGGAATTGTGCCACTGTCCAAGCCTGAG...GGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAACTCAGGCTTGGACAGTaGCACAATTCCAAACACATT +
Preference number: 4 (lower is better)
Translates to: SAAWSCQTPTAWKVPLTELRLGQ*HNSKHI
Trigger: AATGTGTTTGGAATTGTGCCACTGTCCAAGCCTGAG...TTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACTCAGGCTTGGACAGTaGCACAATTCCAAACACATT +
Preference number: 4 (lower is better)
Translates to: FGETLLRPPLPRGAVRRPLRLGQ*HNSKHI
Trigger: AATGTGTTTGGAATTGTGCCACTGTCCAAGCCTGAG...TGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCACCTTCATGGCAGCCTaGAGCTTACTGAACTGCTGT +
Preference number: 4 (lower is better)
Translates to: KAKVFSMQIGSQVGAVVPTFMAA*SLLNCC
Trigger: ACAGCAGTTCAGTAAGCTCCAGGCTGCCATGAAGGT...GGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGGTGCCTCCTTTTAGCTaGTGTTTGAAGATAGCCGAG +
Preference number: 4 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQVPPFS*CLKIAE
Trigger: CTCGGCTATCTTCAAACACCAGCTAAAAGGAGGCAC...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp ACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACGAACAGAGTGAGTGCTaGCTGGACTTGAGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: TKQWQKGRGMANRSSTRYEQSEC*LDLRAL
Trigger: CAGGGCTCTCAAGTCCAGCCAGCACTCACTCTGTTC...GTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTAAATAACTGCTCATTGCACTGTACTCCACCCAGTTaGTACCGTGGCTGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: PRVGAGGRDQLLNNCSLHCTPPS*YRGCGP
Trigger: TGGGCCACAGCCACGGTACCAACTGGGTGGAGTACA...GTGCAATGAGCAGTTATTTAAGAGCTGATCTCTTCCACCTGCACCCACCCGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTAAATAACTGCTCATTGCACGGGGTGCATTCTGGGTaGCTGGGTTCTGCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: PRVGAGGRDQLLNNCSLHGVHSG*LGSAWC
Trigger: ACACCAAGCAGAACCCAGCCACCCAGAATGCACCCC...GTGCAATGAGCAGTTATTTAAGAGCTGATCTCTTCCACCTGCACCCACCCGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGAAGTGAAGATGGAGGGGAGATTCCCAAGGCATCCCACAGGCCCCAGCTGCAGCTGATGATCTTTTTCTaGGAGTCCTGCAGAAGCCGG +
Preference number: 4 (lower is better)
Translates to: RSEDGGEIPKASHRPQLQLMIFF*ESCRSR
Trigger: CCGGCTTCTGCAGGACTCCCAGAAAAAGATCATCAG...CTGCAGCTGGGGCCTGTGGGATGCCTTGGGAATCTCCCCTCCATCTTCACTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TTAGGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCGGCGCAAGGCCAGCTaGGAGCCACCTTCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: LGLQSDKQTKTSTFHCAHRRKAS*EPPSRP
Trigger: AGGCCTGGAAGGTGGCTCCCAGCTGGCCTTGCGCCG...GTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACAAACACCATGTGGTCTaGGTAACCTTGGCGGTACAT +
Preference number: 4 (lower is better)
Translates to: LSLERLCFAHLCRVELSDKHHVV*VTLAVH
Trigger: ATGTACCGCCAAGGTTACCCAGACCACATGGTGTTT...GTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGAAAACACCATGTGGTCTaGGTAACCTTGGCGGTACAT +
Preference number: 4 (lower is better)
Translates to: ALFGETLLRPPLPRGAVRKHHVV*VTLAVH
Trigger: ATGTACCGCCAAGGTTACCCAGACCACATGGTGTTT...TCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGATCCATCTCCTTGGAATaGGTCTGTCTCATTCTCTCC +
Preference number: 4 (lower is better)
Translates to: ALFGETLLRPPLPRGAVRSISLE*VCLILS
Trigger: GGAGAGAATGAGACAGACCCATTCCAAGGAGATGGA...TCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACTCCATCTCCTTGGAATaGGTCTGTCTCATTCTCTCC +
Preference number: 4 (lower is better)
Translates to: LSLERLCFAHLCRVELSDSISLE*VCLILS
Trigger: GGAGAGAATGAGACAGACCCATTCCAAGGAGATGGA...GTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGTCCATCTCCTTGGAATaGGTCTGTCTCATTCTCTCC +
Preference number: 4 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQSISLE*VCLILS
Trigger: GGAGAGAATGAGACAGACCCATTCCAAGGAGATGGA...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGACTCTCCATCTCCTTaGAATGGGTCTGTCTCATTC +
Preference number: 4 (lower is better)
Translates to: LSLERLCFAHLCRVELSDDSPSP*NGSVSF
Trigger: GAATGAGACAGACCCATTCCAAGGAGATGGAGAGTC...GTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGAGCTGGTTCTTCAGCTaGGCAATCTCCCTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: QKAKVFSMQIGSQVGAVVSWFFS*AISLLL
Trigger: GAGCAAGAGGGAGATTGCCCAGCTGAAGAACCAGCT...CACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGTCCGACTCTTCCAGCTaGTTCTTCAGCTGGGCAATC +
Preference number: 4 (lower is better)
Translates to: QKAKVFSMQIGSQVGAVVSDSSS*FFSWAI
Trigger: GATTGCCCAGCTGAAGAACCAGCTGGAAGAGTCGGA...CACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCTTGCTTCTCCTTGTTaGACTCTTCAATCTGAGCCT +
Preference number: 4 (lower is better)
Translates to: CRVELSDAHSLESPPDRKLASPC*TLQSEP
Trigger: AGGCTCAGATTGAAGAGTCCAACAAGGAGAAGCAAG...CTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GAGTACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGTCCAGGAACTCCACCTaGCTCTGCAGAGCTTGTAGC +
Preference number: 4 (lower is better)
Translates to: EYKAMAEGKGDGKQVQHQSRNST*LCRACS
Trigger: GCTACAAGCTCTGCAGAGCCAGGTGGAGTTCCTGGA...CTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGTACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGTCCAGGCGCTTCACTTaGGTCTTTTCGAACTCCAGG +
Preference number: 4 (lower is better)
Translates to: QKAKVFSMQIGSQVGAVVSRRFT*VFSNSR
Trigger: CCTGGAGTTCGAAAAGACCCAAGTGAAGCGCCTGGA...CACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTAAATAACTGCTCATTGCACCCTCGGCTTCCTTCCTaGCAAGCTCGCTCATCTCCT +
Preference number: 4 (lower is better)
Translates to: PRVGAGGRDQLLNNCSLHPRLPS*QARSSP
Trigger: AGGAGATGAGCGAGCTTGCCAGGAAGGAAGCCGAGG...GTGCAATGAGCAGTTATTTAAGAGCTGATCTCTTCCACCTGCACCCACCCGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCTGGAGAAGTGAAGATGGAGGGGAGATTCCCAAGGCATCCCACAGGCCCCAGCCATCTCATCCTCAATaGCAGCTTGCAAGTCCCCAA +
Preference number: 4 (lower is better)
Translates to: LWRSEDGGEIPKASHRPQPSHPQ*QLASPQ
Trigger: TTGGGGACTTGCAAGCTGCCATTGAGGATGAGATGG...CTGGGGCCTGTGGGATGCCTTGGGAATCTCCCCTCCATCTTCACTTCTCCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGAAGTGAAGATGGAGGGGAGATTCCCAAGGCATCCCACAGGCCCCAGCTGCAGCCATCTCATCCTCAATaGCAGCTTGCAAGTCCCCAA +
Preference number: 4 (lower is better)
Translates to: RSEDGGEIPKASHRPQLQPSHPQ*QLASPQ
Trigger: TTGGGGACTTGCAAGCTGCCATTGAGGATGAGATGG...CTGCAGCTGGGGCCTGTGGGATGCCTTGGGAATCTCCCCTCCATCTTCACTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACAGGTGGGTCAGGGGCGAGTaGCTTCCAGTGGCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: LQSDKQTKTSTFHCAHHRWVRGE*LPVAGW
Trigger: CCAACCAGCCACTGGAAGCCACTCGCCCCTGACCCA...CCTGTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GAGTACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGTGGTCTCTGTCAGCTTaGCCTCTGTGTCGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: EYKAMAEGKGDGKQVQHQWSLSA*PLCRCH
Trigger: GTGACAGCGACACAGAGGCCAAGCTGACAGAGACCA...CTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGTACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp ACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGGTCTCTGTCAGCTTaGCCTCTGTGTCGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: TKQWQKGRGMANRSSTRYWSLSA*PLCRCH
Trigger: GTGACAGCGACACAGAGGCCAAGCTGACAGAGACCA...GTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCGTTTGACAATCATCTaGGAGTTCTGCTTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: KAKVFSMQIGSQVGAVVPRLTII*EFCLAS
Trigger: ACTGGCCAAGCAGAACTCTCAGATGATTGTCAAACG...GGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR TCA 90 bp CTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACAGGCACCTCTACCTGAGGTaGTGGGGCTGCAGAGTGCTC +
Preference number: 4 (lower is better)
Translates to: LQSDKQTKTSTFHCAHHRHLYLR*WGCRVL
Trigger: GAGCACTCTGCAGCCCCATCACCTCAGGTAGAGGTG...CCTGTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
CDS-3UTR TCA 90 bp AGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCTACTGCACCAGATGCTaGAAGCTGGTAGTCTTGCCA +
Preference number: 4 (lower is better)
Translates to: RKPRCFPCRSAVRWGQWCYCTRC*KLVVLP
Trigger: TGGCAAGACTACCAGCTTTCAGCATCTGGTGCAGTA...GCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp GAAGGGGCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAGTGCTGGCTGGACTTaGGAGCCCTGTTTACCAGGG +
Preference number: 4 (lower is better)
Translates to: EGAFYFLTSIRSTGRAQPSAGWT*EPCLPG
Trigger: CCCTGGTAAACAGGGCTCTCAAGTCCAGCCAGCACT...GGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGCCCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp TTAGGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACGCCTGCAATCGAGCCTaGGAGCACCGTGGCACTGCC +
Preference number: 4 (lower is better)
Translates to: LGLQSDKQTKTSTFHCAHACNRA*EHRGTA
Trigger: GGCAGTGCCACGGTGCTCTCAGGCTCGATTGCAGGC...GTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp GGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACCGGCCATGCCGGTGGTaGAGGTTTTCCTCATGCTGG +
Preference number: 4 (lower is better)
Translates to: GLQSDKQTKTSTFHCAHHRPCRW*RFSSCW
Trigger: CCAGCATGAGGAAAACCTTCACCACCGGCATGGCCG...GTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp GAGTACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGGATCTTTCTCTTCTTaGAGTGCTGGCGGGCAAGGT +
Preference number: 4 (lower is better)
Translates to: EYKAMAEGKGDGKQVQHQGSFSS*SAGGQG
Trigger: ACCTTGCCCGCCAGCACTTCAAGAAGAGAAAGATCC...CTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGTACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp GGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACCTAGCCGGTCACTGCTaGGTCGGAGCTCGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: GLQSDKQTKTSTFHCAHHLAGHC*VGARSS
Trigger: AGAGGAACGAGCTCCGACTCAGCAGTGACCGGCTAG...GTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACAGGGGAGCCGCTTCTTGGTaGAGTCCACCTCCCGAACAG +
Preference number: 4 (lower is better)
Translates to: LQSDKQTKTSTFHCAHHRGAASW*SPPPEQ
Trigger: CTGTTCGGGAGGTGGACTTCACCAAGAAGCGGCTCC...CCTGTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp GGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACGGAGCCGCTTCTTGGTaGAGTCCACCTCCCGAACAG +
Preference number: 4 (lower is better)
Translates to: GLQSDKQTKTSTFHCAHHGAASW*SPPPEQ
Trigger: CTGTTCGGGAGGTGGACTTCACCAAGAAGCGGCTCC...GTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp ACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTTTGGCACTTCTTCTTaGGCTGCTGCAGTGCCCGTT +
Preference number: 4 (lower is better)
Translates to: TKQWQKGRGMANRSSTRYFGTSS*AAAVPV
Trigger: AACGGGCACTGCAGCAGCTCAAGAAGAAGTGCCAAA...GTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp GAGTACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGTTTGCTGCTTCAAGCTaGAAGCCTCAGCCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: EYKAMAEGKGDGKQVQHQFAASS*KPQPGA
Trigger: TGCTCCTGGCTGAGGCTTTCAGCTTGAAGCAGCAAA...CTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGTACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp GGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACCCTCTTCCTGGTCCTTaGCCTTGGCCTCCAAGTCCC +
Preference number: 4 (lower is better)
Translates to: GLQSDKQTKTSTFHCAHHPLPGP*PWPPSP
Trigger: GGGACTTGGAGGCCAAGGTCAAGGACCAGGAAGAGG...GTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp GAGTACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGTTAAGTGGTCCAGCATaGTCTGGGCATCTGCCAGCA +
Preference number: 4 (lower is better)
Translates to: EYKAMAEGKGDGKQVQHQLSGPA*SGHLPA
Trigger: TGCTGGCAGATGCCCAGATCATGCTGGACCACTTAA...CTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGTACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp ACAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTTTAAGTGGTCCAGCATaGTCTGGGCATCTGCCAGCA +
Preference number: 4 (lower is better)
Translates to: TESQGVFHADRQSGGGSGLSGPA*SGHLPA
Trigger: TGCTGGCAGATGCCCAGATCATGCTGGACCACTTAA...ACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AGAAGTGAAGATGGAGGGGAGATTCCCAAGGCATCCCACAGGCCCCAGCTGCAGTCTTCCAGCCGGTTTTaGATCTCGTTTTTCTCACGC +
Preference number: 4 (lower is better)
Translates to: RSEDGGEIPKASHRPQLQSSSRF*ISFFSR
Trigger: GCGTGAGAAAAACGAGATTCAAAACCGGCTGGAAGA...CTGCAGCTGGGGCCTGTGGGATGCCTTGGGAATCTCCCCTCCATCTTCACTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp ACAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTAGGTCCCTTGTTCTTTaGCAACCAGGACTTGACCCC +
Preference number: 4 (lower is better)
Translates to: TESQGVFHADRQSGGGSGRSLVL*QPGLDP
Trigger: GGGGTCAAGTCCTGGTTGTCAAAGAACAAGGGACCT...ACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TCTGGGGTAAGTGTGTGGGGACAGGGTTATGGGCAGAAGAAAGATGACAAAGGGTCAATGTCCGTCAGGTaGAGGTCAGAGCCACTGGCC +
Preference number: 4 (lower is better)
Translates to: SGVSVWGQGYGQKKDDKGSMSVR*RSEPLA
Trigger: GGCCAGTGGCTCTGACCTGCACCTGACGGACATTGA...CCCTTTGTCATCTTTCTTCTGCCCATAACCCTGTCCCCACACACTTACCCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
CDS-3UTR GCA 90 bp CTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACAGGGATGGGGCTGCAGAGTaGTCTGAGGGGGTTGAGGTC +
Preference number: 4 (lower is better)
Translates to: LQSDKQTKTSTFHCAHHRDGAAE*SEGVEV
Trigger: GACCTCAACCCCCTCAGAGCACTCTGCAGCCCCATC...CCTGTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
CDS-3UTR GCA 90 bp TCTGGGGTAAGTGTGTGGGGACAGGGTTATGGGCAGAAGAAAGATGACAAAGGGGTCCTGGTCGAGGAATaGCTAGCCCAGGATGCTGCA +
Preference number: 4 (lower is better)
Translates to: SGVSVWGQGYGQKKDDKGVLVEE*LAQDAA
Trigger: TGCAGCATCCTGGGCTAGGCATTCCTCGACCAGGAC...CCCTTTGTCATCTTTCTTCTGCCCATAACCCTGTCCCCACACACTTACCCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
CDS-3UTR GCA 90 bp CCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTAAATAACTGCTCATTGCACGATCCAGCATGGTTGTaGGCCGCAGTGAGAAGCCAA +
Preference number: 4 (lower is better)
Translates to: PRVGAGGRDQLLNNCSLHDPAWL*AAVRSQ
Trigger: TTGGCTTCTCACTGCGGCGCACAACCATGCTGGATC...GTGCAATGAGCAGTTATTTAAGAGCTGATCTCTTCCACCTGCACCCACCCGCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
CDS-3UTR GCA 90 bp CTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACAGGAGCGTAGATGTGGGGTaGCATGTCCTCCCGCCGACA +
Preference number: 4 (lower is better)
Translates to: LQSDKQTKTSTFHCAHHRSVDVG*HVLPPT
Trigger: TGTCGGCGGGAGGACATGGCACCCCACATCTACGCT...CCTGTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCAACATCGCCCTATATaGAGTCTGGGCTACAGCGTA +
Preference number: 4 (lower is better)
Translates to: RKPRCFPCRSAVRWGQWCQHRPI*SLGYSV
Trigger: TACGCTGTAGCCCAGACTGCATATAGGGCGATGTTG...GCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCAAACACATTGTTCTCTaGCAAGTGGTTCAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: KPRCFPCRSAVRWGQWCPKHIVL*QVVQVE
Trigger: CTCCACCTGAACCACTTGGCAGAGAACAATGTGTTT...GGGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTAAATAACTGCTCATTGCACTGCTGTGCAGCCTTCTaGTTCTCCTCAGGCTTGGAC +
Preference number: 4 (lower is better)
Translates to: PRVGAGGRDQLLNNCSLHCCAAF*FSSGLD
Trigger: GTCCAAGCCTGAGGAGAAGCAGAAGGCTGCACAGCA...GTGCAATGAGCAGTTATTTAAGAGCTGATCTCTTCCACCTGCACCCACCCGCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCTGGAGCTTACTGAACTaGTGTGCAGCCTTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: RKPRCFPCRSAVRWGQWCWSLLN*CAAFCF
Trigger: GAAGCAGAAGGCTGCACAGCAGTTCAGTAAGCTCCA...GCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp ACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGGACCGTTGCAGGGTaGCTCCTTTTAGCTGGTGTT +
Preference number: 4 (lower is better)
Translates to: TKQWQKGRGMANRSSTRYWTVAG*LLLAGV
Trigger: AACACCAGCTAAAAGGAGGCACCCTGCAACGGTCCA...GTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACAGGGAGCACTCAGTTTGGTaGCCTCTCCCAGGCCGCTCT +
Preference number: 4 (lower is better)
Translates to: LQSDKQTKTSTFHCAHHREHSVW*PLPGRS
Trigger: AGAGCGGCCTGGGAGAGGGCACCAAACTGAGTGCTC...CCTGTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACGAGCACTCAGTTTGGTaGCCTCTCCCAGGCCGCTCT +
Preference number: 4 (lower is better)
Translates to: GLQSDKQTKTSTFHCAHHEHSVW*PLPGRS
Trigger: AGAGCGGCCTGGGAGAGGGCACCAAACTGAGTGCTC...GTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACAAGCAGTGCACGAAATaGATCTTGGACCTCTTGATG +
Preference number: 4 (lower is better)
Translates to: LSLERLCFAHLCRVELSDKQCTK*ILDLLM
Trigger: CATCAAGAGGTCCAAGATGCATTTCGTGCACTGCTT...GTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGAAGCAGTGCACGAAATaGATCTTGGACCTCTTGATG +
Preference number: 4 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQKQCTK*ILDLLM
Trigger: CATCAAGAGGTCCAAGATGCATTTCGTGCACTGCTT...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCACAGGAAGGAAGCAGTaGACGAAATGCATCTTGGAC +
Preference number: 4 (lower is better)
Translates to: SNGRREGGWQTGPAPGTATGRKQ*TKCILD
Trigger: GTCCAAGATGCATTTCGTGCACTGCTTCCTTCCTGT...GGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACAGGGGCCCAGACAGCAGCTaGTCTTTTCCAGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: LQSDKQTKTSTFHCAHHRGPDSS*SFPGPG
Trigger: CCCTGGACCTGGAAAAGAGCAGCTGCTGTCTGGGCC...CCTGTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TTAGGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCCGTGCCAACGTGCCTaGCCGGAAGAACACCCGGCT +
Preference number: 4 (lower is better)
Translates to: LGLQSDKQTKTSTFHCAHPCQRA*PEEHPA
Trigger: AGCCGGGTGTTCTTCCGGGCAGGCACGTTGGCACGG...GTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCTGGAGAAGTGAAGATGGAGGGGAGATTCCCAAGGCATCCCACAGGCCCCAGTTCTTGATGTTCTTCTaGACACAGCGAATGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LWRSEDGGEIPKASHRPQFLMFF*TQRMAR
Trigger: CCTGGCCATTCGCTGTGTGCAGAAGAACATCAAGAA...CTGGGGCCTGTGGGATGCCTTGGGAATCTCCCCTCCATCTTCACTTCTCCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTAAATAACTGCTCATTGCACCCACCTTCTCAAGCTTaGTGCGCAGCTGCTGGATCT +
Preference number: 4 (lower is better)
Translates to: PRVGAGGRDQLLNNCSLHPPSQA*CAAAGS
Trigger: AGATCCAGCAGCTGCGCAGCAAGCTTGAGAAGGTGG...GTGCAATGAGCAGTTATTTAAGAGCTGATCTCTTCCACCTGCACCCACCCGCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCTTCCATCACCTCCATCTaGTTCTTCAGTGCGTCATAC +
Preference number: 4 (lower is better)
Translates to: AMAEGKGDGKQVQHQVLPSITSI*FFSASY
Trigger: GTATGACGCACTGAAGAAGCAGATGGAGGTGATGGA...AGGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TCTGGGGTAAGTGTGTGGGGACAGGGTTATGGGCAGAAGAAAGATGACAAAGGGTCTCCAGCTGCCTCCTaGTCTGCTGTTCCACCTCCA +
Preference number: 4 (lower is better)
Translates to: SGVSVWGQGYGQKKDDKGSPAAS*SAVPPP
Trigger: TGGAGGTGGAACAGCAGAGCAGGAGGCAGCTGGAGA...CCCTTTGTCATCTTTCTTCTGCCCATAACCCTGTCCCCACACACTTACCCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGTACAAAGCAATGTCGTGGTTTCGGACCTaGTGGCCCTCCAGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: LTSIRSTGRAQPNEYKAMSWFRT*WPSRCS
Trigger: GCTGCACCTGGAGGGCCAGCAGGTCCGAAACCACGA...CATTGCTTTGTACTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TTAGGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACTGCAGCTTCTCCCGCTaGGTCTCCTCGTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LGLQSDKQTKTSTFHCAHCSFSR*VSSWAW
Trigger: CCAGGCCCACGAGGAGACGCAGCGGGAGAAGCTGCA...GTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCATTTTCCTCCATTTGCTaGTTCAAGCTGAAAGCCTCA +
Preference number: 4 (lower is better)
Translates to: FGETLLRPPLPRGAVRRPFSSIC*FKLKAS
Trigger: TGAGGCTTTCAGCTTGAAGCAGCAAATGGAGGAAAA...TGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GAGTACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGAGACGCAGCTTGGCCTaGTCCAGCATCTGTATACTC +
Preference number: 4 (lower is better)
Translates to: EYKAMAEGKGDGKQVQHQRRSLA*SSICIL
Trigger: GAGTATACAGATGCTGGAGCAGGCCAAGCTGCGTCT...CTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGTACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp ACAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTAGACGCAGCTTGGCCTaGTCCAGCATCTGTATACTC +
Preference number: 4 (lower is better)
Translates to: TESQGVFHADRQSGGGSGRRSLA*SSICIL
Trigger: GAGTATACAGATGCTGGAGCAGGCCAAGCTGCGTCT...ACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCTACTCCTCCTCGAGCTaGACTTCCATCTGTTTTAAC +
Preference number: 4 (lower is better)
Translates to: KPRCFPCRSAVRWGQWCPYSSSS*TSICFN
Trigger: GTTAAAACAGATGGAAGTGCAGCTCGAGGAGGAGTA...GGGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TCTGGGGTAAGTGTGTGGGGACAGGGTTATGGGCAGAAGAAAGATGACAAAGGGCATGATCTGGGCATCTaGCAGCAGCGCTTTGGTGCG +
Preference number: 4 (lower is better)
Translates to: SGVSVWGQGYGQKKDDKGHDLGI*QQRFGA
Trigger: CGCACCAAAGCGCTGCTGGCAGATGCCCAGATCATG...CCCTTTGTCATCTTTCTTCTGCCCATAACCCTGTCCCCACACACTTACCCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCGCCACAGCTGCCTTGTaGTTCTTCATCAGCTCATTC +
Preference number: 4 (lower is better)
Translates to: RKPRCFPCRSAVRWGQWCATAAL*FFISSF
Trigger: GAATGAGCTGATGAAGAAGCACAAGGCAGCTGTGGC...GCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GAAGGGGCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCGGCCTGGGCCACAGCTaGCTTGTGCTTCTTCATCAG +
Preference number: 4 (lower is better)
Translates to: EGAFYFLTSIRSTGRAQPGLGHS*LVLLHQ
Trigger: CTGATGAAGAAGCACAAGGCAGCTGTGGCCCAGGCC...GGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGCCCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp ACAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTTCCATCTCCAGTTCATaGTTCTTGCGGCTAGCCTCG +
Preference number: 4 (lower is better)
Translates to: TESQGVFHADRQSGGGSGSISSS*FLRLAS
Trigger: CGAGGCTAGCCGCAAGAAGCATGAACTGGAGATGGA...ACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GAGTACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGTCCATCTCCAGTTCATaGTTCTTGCGGCTAGCCTCG +
Preference number: 4 (lower is better)
Translates to: EYKAMAEGKGDGKQVQHQSISSS*FLRLAS
Trigger: CGAGGCTAGCCGCAAGAAGCATGAACTGGAGATGGA...CTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGTACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCGCCATCGTCAGAAGGTaGCTTAGAAGGTCCCTTGTT +
Preference number: 4 (lower is better)
Translates to: RKPRCFPCRSAVRWGQWCAIVRR*LRRSLV
Trigger: AACAAGGGACCTTCTAAGGCACCTTCTGACGATGGC...GCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGTTTGTCACCATGTCCTaGAAACTGTTGATGAGGTCC +
Preference number: 4 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQFVTMS*KLLMRS
Trigger: GGACCTCATCAACAGTTTGCAGGACATGGTGACAAA...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000108375.9
ENSMUST00000135375.4
ENSMUST00000164334.8
CDS-3UTR CCA 90 bp AGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCTCTGAGAGTTCTGCTTaGCCAGTGAACCGAACTTGG +
Preference number: 4 (lower is better)
Translates to: RKPRCFPCRSAVRWGQWCSESSA*PVNRTW
Trigger: CCAAGTTCGGTTCACTGGCCAAGCAGAACTCTCAGA...GCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CCA 90 bp CAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGTCTGAGAGTTCTGCTTaGCCAGTGAACCGAACTTGG +
Preference number: 4 (lower is better)
Translates to: QKAKVFSMQIGSQVGAVVSESSA*PVNRTW
Trigger: CCAAGTTCGGTTCACTGGCCAAGCAGAACTCTCAGA...CACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CCA 90 bp GGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACTCCAGGGAGAGGATCTaGGAGAAGCGGGTGGCACTG +
Preference number: 4 (lower is better)
Translates to: GLQSDKQTKTSTFHCAHHSRERI*EKRVAL
Trigger: CAGTGCCACCCGCTTCTCCCAGATCCTCTCCCTGGA...GTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACGAGGCCGAAGCCACCTaGCCAGCTTGGTCAAAGTCC +
Preference number: 4 (lower is better)
Translates to: GLQSDKQTKTSTFHCAHHEAEAT*PAWSKS
Trigger: GGACTTTGACCAAGCTGGCCAGGTGGCTTCGGCCTC...GTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCCTCAGGCTTGGACAGTaGCACAATTCCAAACACATT +
Preference number: 4 (lower is better)
Translates to: KPRCFPCRSAVRWGQWCPLRLGQ*HNSKHI
Trigger: AATGTGTTTGGAATTGTGCCACTGTCCAAGCCTGAG...GGGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGACCTTCATGGCAGCCTaGAGCTTACTGAACTGCTGT +
Preference number: 4 (lower is better)
Translates to: QKAKVFSMQIGSQVGAVVTFMAA*SLLNCC
Trigger: ACAGCAGTTCAGTAAGCTCCAGGCTGCCATGAAGGT...CACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACAGGTATGCTGCCTTCTaGGCCCATTCGTGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: GLQSDKQTKTSTFHCAHHRYAAF*AHSWRA
Trigger: TGCCCGCCACGAATGGGCCCAGAAGGCAGCATACCT...GTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCGTGCCTCCTTTTAGCTaGTGTTTGAAGATAGCCGAG +
Preference number: 4 (lower is better)
Translates to: SNGRREGGWQTGPAPGTAVPPFS*CLKIAE
Trigger: CTCGGCTATCTTCAAACACCAGCTAAAAGGAGGCAC...GGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGTACAAAGCAATGCCAGAGCACTCAGTTTaGTGCCCTCTCCCAGGCCGC +
Preference number: 4 (lower is better)
Translates to: LTSIRSTGRAQPNEYKAMPEHSV*CPLPGR
Trigger: GCGGCCTGGGAGAGGGCACCAAACTGAGTGCTCTGG...CATTGCTTTGTACTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TCTGGGGTAAGTGTGTGGGGACAGGGTTATGGGCAGAAGAAAGATGACAAAGGGCCCCATTCAGGGTTCTaGAAGCCTGGTGTGTCCACG +
Preference number: 4 (lower is better)
Translates to: SGVSVWGQGYGQKKDDKGPHSGF*KPGVST
Trigger: CGTGGACACACCAGGCTTCCAGAACCCTGAATGGGG...CCCTTTGTCATCTTTCTTCTGCCCATAACCCTGTCCCCACACACTTACCCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACAGGAGGAAGGTGCGCTCGTaGAACAGCCTCTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: LQSDKQTKTSTFHCAHHRRKVRS*NSLCSL
Trigger: CAGGCTGCAGAGGCTGTTCCACGAGCGCACCTTCCT...CCTGTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGGGAGTCATCTGCAACTaGCTCCAAGTCATCAAACGC +
Preference number: 4 (lower is better)
Translates to: QKAKVFSMQIGSQVGAVVGVICN*LQVIKR
Trigger: GCGTTTGATGACTTGGAGCCAGTTGCAGATGACTCC...CACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TCTGGGGTAAGTGTGTGGGGACAGGGTTATGGGCAGAAGAAAGATGACAAAGGGAGTGAGCGAACCAGGTaGGAAGCCTGGTCCACAGCA +
Preference number: 4 (lower is better)
Translates to: SGVSVWGQGYGQKKDDKGSERTR*EAWSTA
Trigger: TGCTGTGGACCAGGCTTCCCACCTGGTTCGCTCACT...CCCTTTGTCATCTTTCTTCTGCCCATAACCCTGTCCCCACACACTTACCCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp ACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGGCTGGGTTCTGCTTaGTGTAATTCAGCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: TKQWQKGRGMANRSSTRYWLGSA*CNSASQ
Trigger: CTGGCTGGCTGAATTACACCAAGCAGAACCCAGCCA...GTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp ACAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTTGGCTGGGTTCTGCTTaGTGTAATTCAGCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: TESQGVFHADRQSGGGSGWLGSA*CNSASQ
Trigger: CTGGCTGGCTGAATTACACCAAGCAGAACCCAGCCA...ACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCTGATGATCTTTTTCTaGGAGTCCTGCAGAAGCCGG +
Preference number: 4 (lower is better)
Translates to: RKPRCFPCRSAVRWGQWCLMIFF*ESCRSR
Trigger: CCGGCTTCTGCAGGACTCCCAGAAAAAGATCATCAG...GCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCTGATGATCTTTTTCTaGGAGTCCTGCAGAAGCCGG +
Preference number: 4 (lower is better)
Translates to: QKAKVFSMQIGSQVGAVVLMIFF*ESCRSR
Trigger: CCGGCTTCTGCAGGACTCCCAGAAAAAGATCATCAG...CACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCTAAACACCATGTGGTCTaGGTAACCTTGGCGGTACAT +
Preference number: 4 (lower is better)
Translates to: AMAEGKGDGKQVQHQVLPKHHVV*VTLAVH
Trigger: ATGTACCGCCAAGGTTACCCAGACCACATGGTGTTT...AGGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGTTTCTTGGTCAGGTGTaGAGCCAGGACATCAAAGCG +
Preference number: 4 (lower is better)
Translates to: QKAKVFSMQIGSQVGAVVFLGQV*SQDIKA
Trigger: CGCTTTGATGTCCTGGCTCCACACCTGACCAAGAAA...CACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACAGGTGGTTTCGGACCTGCTaGCCCTCCAGGTGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: LQSDKQTKTSTFHCAHHRWFRTC*PSRCSL
Trigger: CAAGCTGCACCTGGAGGGCCAGCAGGTCCGAAACCA...CCTGTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCTGACTCTCCATCTCCTTaGAATGGGTCTGTCTCATTC +
Preference number: 4 (lower is better)
Translates to: AMAEGKGDGKQVQHQVLPDSPSP*NGSVSF
Trigger: GAATGAGACAGACCCATTCCAAGGAGATGGAGAGTC...AGGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCGACTCTCCATCTCCTTaGAATGGGTCTGTCTCATTC +
Preference number: 4 (lower is better)
Translates to: KAKVFSMQIGSQVGAVVPDSPSP*NGSVSF
Trigger: GAATGAGACAGACCCATTCCAAGGAGATGGAGAGTC...GGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGGCGCTGTCTTGGCTTTaGCGATGTCATCAATCTGCA +
Preference number: 4 (lower is better)
Translates to: QKAKVFSMQIGSQVGAVVALSWL*RCHQSA
Trigger: TGCAGATTGATGACATCGCCAAAGCCAAGACAGCGC...CACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACTTGCTTCTCCTTGTTaGACTCTTCAATCTGAGCCT +
Preference number: 4 (lower is better)
Translates to: ALFGETLLRPPLPRGAVRLASPC*TLQSEP
Trigger: AGGCTCAGATTGAAGAGTCCAACAAGGAGAAGCAAG...TCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTAAATAACTGCTCATTGCACTCCAGGAACTCCACCTaGCTCTGCAGAGCTTGTAGC +
Preference number: 4 (lower is better)
Translates to: PRVGAGGRDQLLNNCSLHSRNST*LCRACS
Trigger: GCTACAAGCTCTGCAGAGCCAGGTGGAGTTCCTGGA...GTGCAATGAGCAGTTATTTAAGAGCTGATCTCTTCCACCTGCACCCACCCGCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GAGTACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGTCCAGGCGCTTCACTTaGGTCTTTTCGAACTCCAGG +
Preference number: 4 (lower is better)
Translates to: EYKAMAEGKGDGKQVQHQSRRFT*VFSNSR
Trigger: CCTGGAGTTCGAAAAGACCCAAGTGAAGCGCCTGGA...CTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGTACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TCTGGGGTAAGTGTGTGGGGACAGGGTTATGGGCAGAAGAAAGATGACAAAGGGCCTCGGCTTCCTTCCTaGCAAGCTCGCTCATCTCCT +
Preference number: 4 (lower is better)
Translates to: SGVSVWGQGYGQKKDDKGPRLPS*QARSSP
Trigger: AGGAGATGAGCGAGCTTGCCAGGAAGGAAGCCGAGG...CCCTTTGTCATCTTTCTTCTGCCCATAACCCTGTCCCCACACACTTACCCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTAAATAACTGCTCATTGCACGGACTCTTGGCTGTCTaGGAAGTCTCTGAGGGTACC +
Preference number: 4 (lower is better)
Translates to: PRVGAGGRDQLLNNCSLHGLLAV*EVSEGT
Trigger: GGTACCCTCAGAGACTTCCCAGACAGCCAAGAGTCC...GTGCAATGAGCAGTTATTTAAGAGCTGATCTCTTCCACCTGCACCCACCCGCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000167856.8
CDS-3UTR TCA 90 bp ACAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTTCATCCCGGCTCCGTTaGGAGAAGGAAAAACGTTTG +
Preference number: 4 (lower is better)
Translates to: TESQGVFHADRQSGGGSGSSRLR*EKEKRL
Trigger: CAAACGTTTTTCCTTCTCTCAACGGAGCCGGGATGA...ACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR TCA 90 bp CCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTAAATAACTGCTCATTGCACTGCTGCAGTGCCCGTTaGCTCTCATCACTATCTGCT +
Preference number: 4 (lower is better)
Translates to: PRVGAGGRDQLLNNCSLHCCSAR*LSSLSA
Trigger: AGCAGATAGTGATGAGAGTCAACGGGCACTGCAGCA...GTGCAATGAGCAGTTATTTAAGAGCTGATCTCTTCCACCTGCACCCACCCGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCTGTTTTAACTTCTTCTaGCATGACTGCCGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: RKPRCFPCRSAVRWGQWCCFNFF*HDCRAS
Trigger: AGAGGCCCGGCAGTCATGTCAGAAGAAGTTAAAACA...GCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGTCTTCCAGCCGGTTTTaGATCTCGTTTTTCTCACGC +
Preference number: 4 (lower is better)
Translates to: QKAKVFSMQIGSQVGAVVSSSRF*ISFFSR
Trigger: GCGTGAGAAAAACGAGATTCAAAACCGGCTGGAAGA...CACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGTACAAAGCAATGTCGCTTCCTGCCTGCTaGCGAGGGACTTGTCCACCA +
Preference number: 4 (lower is better)
Translates to: LTSIRSTGRAQPNEYKAMSLPAC*RGTCPP
Trigger: TGGTGGACAAGTCCCTCGTCAGCAGGCAGGAAGCGA...CATTGCTTTGTACTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCCACCCCTTGAACATGTaGATCACCTTCTCTGAATAC +
Preference number: 4 (lower is better)
Translates to: SNGRREGGWQTGPAPGTAHPLNM*ITFSEY
Trigger: GTATTCAGAGAAGGTGATGCACATGTTCAAGGGGTG...GGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCACCCCTTGAACATGTaGATCACCTTCTCTGAATAC +
Preference number: 4 (lower is better)
Translates to: KAKVFSMQIGSQVGAVVPHPLNM*ITFSEY
Trigger: GTATTCAGAGAAGGTGATGCACATGTTCAAGGGGTG...GGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGTACAAAGCAATGAGCGTAGATGTGGGGTaGCATGTCCTCCCGCCGACA +
Preference number: 4 (lower is better)
Translates to: LTSIRSTGRAQPNEYKAMSVDVG*HVLPPT
Trigger: TGTCGGCGGGAGGACATGGCACCCCACATCTACGCT...CATTGCTTTGTACTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCAAACACATTGTTCTCTaGCAAGTGGTTCAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: SNGRREGGWQTGPAPGTAKHIVL*QVVQVE
Trigger: CTCCACCTGAACCACTTGGCAGAGAACAATGTGTTT...GGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp ACAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTTGGAGCTTACTGAACTaGTGTGCAGCCTTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: TESQGVFHADRQSGGGSGWSLLN*CAAFCF
Trigger: GAAGCAGAAGGCTGCACAGCAGTTCAGTAAGCTCCA...ACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACATGAGGGCATCTACTTaGAGCTTAATCTGTATGCAC +
Preference number: 4 (lower is better)
Translates to: LSLERLCFAHLCRVELSDMRAST*SLICMH
Trigger: GTGCATACAGATTAAGCTGCAAGTAGATGCCCTCAT...GTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCAAGCAGTGCACGAAATaGATCTTGGACCTCTTGATG +
Preference number: 4 (lower is better)
Translates to: KAKVFSMQIGSQVGAVVPKQCTK*ILDLLM
Trigger: CATCAAGAGGTCCAAGATGCATTTCGTGCACTGCTT...GGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCTGGAGAAGTGAAGATGGAGGGGAGATTCCCAAGGCATCCCACAGGCCCCAGAAGCAGTGCACGAAATaGATCTTGGACCTCTTGATG +
Preference number: 4 (lower is better)
Translates to: LWRSEDGGEIPKASHRPQKQCTK*ILDLLM
Trigger: CATCAAGAGGTCCAAGATGCATTTCGTGCACTGCTT...CTGGGGCCTGTGGGATGCCTTGGGAATCTCCCCTCCATCTTCACTTCTCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGACAGGAAGGAAGCAGTaGACGAAATGCATCTTGGAC +
Preference number: 4 (lower is better)
Translates to: QKAKVFSMQIGSQVGAVVTGRKQ*TKCILD
Trigger: GTCCAAGATGCATTTCGTGCACTGCTTCCTTCCTGT...CACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TCTGGGGTAAGTGTGTGGGGACAGGGTTATGGGCAGAAGAAAGATGACAAAGGGTGGAACAGGGTCAGGTaGCTGCTGGTTTGCTCGTCT +
Preference number: 4 (lower is better)
Translates to: SGVSVWGQGYGQKKDDKGWNRVR*LLVCSS
Trigger: AGACGAGCAAACCAGCAGGCACCTGACCCTGTTCCA...CCCTTTGTCATCTTTCTTCTGCCCATAACCCTGTCCCCACACACTTACCCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGTTCTTGATGTTCTTCTaGACACAGCGAATGGCCAGG +
Preference number: 4 (lower is better)
Translates to: QKAKVFSMQIGSQVGAVVFLMFF*TQRMAR
Trigger: CCTGGCCATTCGCTGTGTGCAGAAGAACATCAAGAA...CACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GAAGGGGCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCCCTTCTCAAGCTTGCTaGGCAGCTGCTGGATCTCCT +
Preference number: 4 (lower is better)
Translates to: EGAFYFLTSIRSTGRAQPPSQAC*AAAGSP
Trigger: AGGAGATCCAGCAGCTGCGCAGCAAGCTTGAGAAGG...GGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGCCCCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TCTGGGGTAAGTGTGTGGGGACAGGGTTATGGGCAGAAGAAAGATGACAAAGGGCCTTCTCAAGCTTGCTaGGCAGCTGCTGGATCTCCT +
Preference number: 4 (lower is better)
Translates to: SGVSVWGQGYGQKKDDKGPSQAC*AAAGSP
Trigger: AGGAGATCCAGCAGCTGCGCAGCAAGCTTGAGAAGG...CCCTTTGTCATCTTTCTTCTGCCCATAACCCTGTCCCCACACACTTACCCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGTCCATCACCTCCATCTaGTTCTTCAGTGCGTCATAC +
Preference number: 4 (lower is better)
Translates to: QKAKVFSMQIGSQVGAVVSITSI*FFSASY
Trigger: GTATGACGCACTGAAGAAGCAGATGGAGGTGATGGA...CACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTAAATAACTGCTCATTGCACACTCTCATCACTATCTaGTTGCAGGTCCCCAAGCCG +
Preference number: 4 (lower is better)
Translates to: PRVGAGGRDQLLNNCSLHTLITI*LQVPKP
Trigger: CGGCTTGGGGACCTGCAAGCAGATAGTGATGAGAGT...GTGCAATGAGCAGTTATTTAAGAGCTGATCTCTTCCACCTGCACCCACCCGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACAGGTGGAGTTTCTCCCTCTaGAGCTTCTCCCGCTGCGTC +
Preference number: 4 (lower is better)
Translates to: LQSDKQTKTSTFHCAHHRWSFSL*SFSRCV
Trigger: GACGCAGCGGGAGAAGCTGCAGAGGGAGAAACTCCA...CCTGTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGATTTTCCTCCATTTGCTaGTTCAAGCTGAAAGCCTCA +
Preference number: 4 (lower is better)
Translates to: ALFGETLLRPPLPRGAVRFSSIC*FKLKAS
Trigger: TGAGGCTTTCAGCTTGAAGCAGCAAATGGAGGAAAA...TCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGTTTTCCTCCATTTGCTaGTTCAAGCTGAAAGCCTCA +
Preference number: 4 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQFSSIC*FKLKAS
Trigger: TGAGGCTTTCAGCTTGAAGCAGCAAATGGAGGAAAA...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCTGGAGAAGTGAAGATGGAGGGGAGATTCCCAAGGCATCCCACAGGCCCCAGTACTCCTCCTCGAGCTaGACTTCCATCTGTTTTAAC +
Preference number: 4 (lower is better)
Translates to: LWRSEDGGEIPKASHRPQYSSSS*TSICFN
Trigger: GTTAAAACAGATGGAAGTGCAGCTCGAGGAGGAGTA...CTGGGGCCTGTGGGATGCCTTGGGAATCTCCCCTCCATCTTCACTTCTCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCTACTCCTCCTCGAGCTaGACTTCCATCTGTTTTAAC +
Preference number: 4 (lower is better)
Translates to: KAKVFSMQIGSQVGAVVPYSSSS*TSICFN
Trigger: GTTAAAACAGATGGAAGTGCAGCTCGAGGAGGAGTA...GGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACAGGCATGATCTGGGCATCTaGCAGCAGCGCTTTGGTGCG +
Preference number: 4 (lower is better)
Translates to: LQSDKQTKTSTFHCAHHRHDLGI*QQRFGA
Trigger: CGCACCAAAGCGCTGCTGGCAGATGCCCAGATCATG...CCTGTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACCATGATCTGGGCATCTaGCAGCAGCGCTTTGGTGCG +
Preference number: 4 (lower is better)
Translates to: GLQSDKQTKTSTFHCAHHHDLGI*QQRFGA
Trigger: CGCACCAAAGCGCTGCTGGCAGATGCCCAGATCATG...GTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp ACAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCGATGTCATCAATCTaGAGGTGCAGGTCTTCCATC +
Preference number: 4 (lower is better)
Translates to: TESQGVFHADRQSGGGSGAMSSI*RCRSSI
Trigger: GATGGAAGACCTGCACCTGCAGATTGATGACATCGC...ACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp ACAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCACAGCTGCCTTGTaGTTCTTCATCAGCTCATTC +
Preference number: 4 (lower is better)
Translates to: TESQGVFHADRQSGGGSGATAAL*FFISSF
Trigger: GAATGAGCTGATGAAGAAGCACAAGGCAGCTGTGGC...ACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TCTGGGGTAAGTGTGTGGGGACAGGGTTATGGGCAGAAGAAAGATGACAAAGGGTTGTCCACCATGGACTaGTCCAGGAACTCCACCTGG +
Preference number: 4 (lower is better)
Translates to: SGVSVWGQGYGQKKDDKGLSTMD*SRNSTW
Trigger: CCAGGTGGAGTTCCTGGAGCAGTCCATGGTGGACAA...CCCTTTGTCATCTTTCTTCTGCCCATAACCCTGTCCCCACACACTTACCCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp ACAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTTCTGAGAGTTCTGCTTaGCCAGTGAACCGAACTTGG +
Preference number: 4 (lower is better)
Translates to: TESQGVFHADRQSGGGSGSESSA*PVNRTW
Trigger: CCAAGTTCGGTTCACTGGCCAAGCAGAACTCTCAGA...ACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CCA 90 bp AGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCAGCCAAAGTCTCCTGTaGGTCTTCGTTGTAACTCCA +
Preference number: 4 (lower is better)
Translates to: RKPRCFPCRSAVRWGQWCSQSLL*VFVVTP
Trigger: TGGAGTTACAACGAAGACCCACAGGAGACTTTGGCT...GCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CCA 90 bp GAAGGGGCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCCAGCTCGCTAAGCTCTaGGATGGGCTGTACCTTGAG +
Preference number: 4 (lower is better)
Translates to: EGAFYFLTSIRSTGRAQPQLAKL*DGLYLE
Trigger: CTCAAGGTACAGCCCATCCCAGAGCTTAGCGAGCTG...GGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGCCCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
CDS-3UTR CCA 90 bp GAAGGGGCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCCATCCACATCCAGGATaGCTCCGTCATGGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: EGAFYFLTSIRSTGRAQPHPHPG*LRHGPA
Trigger: AGCTGGACCATGACGGAGCCATCCTGGATGTGGATG...GGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGCCCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGTACAAAGCAATGTCCAGGGAGAGGATCTaGGAGAAGCGGGTGGCACTG +
Preference number: 4 (lower is better)
Translates to: LTSIRSTGRAQPNEYKAMSRERI*EKRVAL
Trigger: CAGTGCCACCCGCTTCTCCCAGATCCTCTCCCTGGA...CATTGCTTTGTACTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGTACAAAGCAATGGAGGCCGAAGCCACCTaGCCAGCTTGGTCAAAGTCC +
Preference number: 4 (lower is better)
Translates to: LTSIRSTGRAQPNEYKAMEAEAT*PAWSKS
Trigger: GGACTTTGACCAAGCTGGCCAGGTGGCTTCGGCCTC...CATTGCTTTGTACTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCCTCAGGCTTGGACAGTaGCACAATTCCAAACACATT +
Preference number: 4 (lower is better)
Translates to: SNGRREGGWQTGPAPGTALRLGQ*HNSKHI
Trigger: AATGTGTTTGGAATTGTGCCACTGTCCAAGCCTGAG...GGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCTGGAGAAGTGAAGATGGAGGGGAGATTCCCAAGGCATCCCACAGGCCCCAGCTCAGGCTTGGACAGTaGCACAATTCCAAACACATT +
Preference number: 4 (lower is better)
Translates to: LWRSEDGGEIPKASHRPQLRLGQ*HNSKHI
Trigger: AATGTGTTTGGAATTGTGCCACTGTCCAAGCCTGAG...CTGGGGCCTGTGGGATGCCTTGGGAATCTCCCCTCCATCTTCACTTCTCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GAGTACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGACCTTCATGGCAGCCTaGAGCTTACTGAACTGCTGT +
Preference number: 4 (lower is better)
Translates to: EYKAMAEGKGDGKQVQHQTFMAA*SLLNCC
Trigger: ACAGCAGTTCAGTAAGCTCCAGGCTGCCATGAAGGT...CTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGTACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp ACAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTACCTTCATGGCAGCCTaGAGCTTACTGAACTGCTGT +
Preference number: 4 (lower is better)
Translates to: TESQGVFHADRQSGGGSGTFMAA*SLLNCC
Trigger: ACAGCAGTTCAGTAAGCTCCAGGCTGCCATGAAGGT...ACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TCTGGGGTAAGTGTGTGGGGACAGGGTTATGGGCAGAAGAAAGATGACAAAGGGTTCTGGGCCCATTCGTaGCGGGCAAACTGCTTTCGT +
Preference number: 4 (lower is better)
Translates to: SGVSVWGQGYGQKKDDKGFWAHS*RANCFR
Trigger: ACGAAAGCAGTTTGCCCGCCACGAATGGGCCCAGAA...CCCTTTGTCATCTTTCTTCTGCCCATAACCCTGTCCCCACACACTTACCCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACCCCCATTCAGGGTTCTaGAAGCCTGGTGTGTCCACG +
Preference number: 4 (lower is better)
Translates to: GLQSDKQTKTSTFHCAHHPHSGF*KPGVST
Trigger: CGTGGACACACCAGGCTTCCAGAACCCTGAATGGGG...GTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGAGGAAGGTGCGCTCGTaGAACAGCCTCTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: AFYFLTSIRSTGRAQPNERKVRS*NSLCSL
Trigger: CAGGCTGCAGAGGCTGTTCCACGAGCGCACCTTCCT...CTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp ACAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGGAGTCATCTGCAACTaGCTCCAAGTCATCAAACGC +
Preference number: 4 (lower is better)
Translates to: TESQGVFHADRQSGGGSGGVICN*LQVIKR
Trigger: GCGTTTGATGACTTGGAGCCAGTTGCAGATGACTCC...ACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACTTGGTACCGTGGCTGTaGCCCAGGAGAAAGTGCCGA +
Preference number: 4 (lower is better)
Translates to: GLQSDKQTKTSTFHCAHHLVPWL*PRRKCR
Trigger: TCGGCACTTTCTCCTGGGCCACAGCCACGGTACCAA...GTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGAGCCGGGGTGCATTCTaGGTGGCTGGGTTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: AFYFLTSIRSTGRAQPNESRGAF*VAGFCL
Trigger: CAAGCAGAACCCAGCCACCCAGAATGCACCCCGGCT...CTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp ACAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTCTGATGATCTTTTTCTaGGAGTCCTGCAGAAGCCGG +
Preference number: 4 (lower is better)
Translates to: TESQGVFHADRQSGGGSGLMIFF*ESCRSR
Trigger: CCGGCTTCTGCAGGACTCCCAGAAAAAGATCATCAG...ACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCAAACACCATGTGGTCTaGGTAACCTTGGCGGTACAT +
Preference number: 4 (lower is better)
Translates to: RKPRCFPCRSAVRWGQWCKHHVV*VTLAVH
Trigger: ATGTACCGCCAAGGTTACCCAGACCACATGGTGTTT...GCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGTACAAAGCAATGCCTCCAGGTGCAGCTTaGTGTCCTGCAGCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: LTSIRSTGRAQPNEYKAMPPGAA*CPAAQL
Trigger: CAGCTGAGCTGCAGGACACCAAGCTGCACCTGGAGG...CATTGCTTTGTACTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGTGGTTTCGGACCTGCTaGCCCTCCAGGTGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: AFYFLTSIRSTGRAQPNEWFRTC*PSRCSL
Trigger: CAAGCTGCACCTGGAGGGCCAGCAGGTCCGAAACCA...CTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GAAGGGGCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCTCTCCAGACGCAGCTTaGCCTGCTCCAGCATCTGTA +
Preference number: 4 (lower is better)
Translates to: EGAFYFLTSIRSTGRAQPSPDAA*PAPASV
Trigger: TACAGATGCTGGAGCAGGCCAAGCTGCGTCTGGAGA...GGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGCCCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGGACTCTCCATCTCCTTaGAATGGGTCTGTCTCATTC +
Preference number: 4 (lower is better)
Translates to: QKAKVFSMQIGSQVGAVVDSPSP*NGSVSF
Trigger: GAATGAGACAGACCCATTCCAAGGAGATGGAGAGTC...CACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCGCATTGTTCTTTAAGTaGTCCAGCATGATCTGGGCA +
Preference number: 4 (lower is better)
Translates to: KAKVFSMQIGSQVGAVVPALFFK*SSMIWA
Trigger: TGCCCAGATCATGCTGGACCACTTAAAGAACAATGC...GGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp ACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACGCGCTGTCTTGGCTTTaGCGATGTCATCAATCTGCA +
Preference number: 4 (lower is better)
Translates to: TKQWQKGRGMANRSSTRYALSWL*RCHQSA
Trigger: TGCAGATTGATGACATCGCCAAAGCCAAGACAGCGC...GTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTAAATAACTGCTCATTGCACCCTCCAGCGCTGTCTTaGCTTTGGCGATGTCATCAA +
Preference number: 4 (lower is better)
Translates to: PRVGAGGRDQLLNNCSLHPPALS*LWRCHQ
Trigger: TTGATGACATCGCCAAAGCCAAGACAGCGCTGGAGG...GTGCAATGAGCAGTTATTTAAGAGCTGATCTCTTCCACCTGCACCCACCCGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCTTGCTTCTCCTTGTTaGACTCTTCAATCTGAGCCT +
Preference number: 4 (lower is better)
Translates to: KAKVFSMQIGSQVGAVVPLASPC*TLQSEP
Trigger: AGGCTCAGATTGAAGAGTCCAACAAGGAGAAGCAAG...GGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGAAGTGAAGATGGAGGGGAGATTCCCAAGGCATCCCACAGGCCCCAGCTGCAGCTTGCTTCTCCTTGTTaGACTCTTCAATCTGAGCCT +
Preference number: 4 (lower is better)
Translates to: RSEDGGEIPKASHRPQLQLASPC*TLQSEP
Trigger: AGGCTCAGATTGAAGAGTCCAACAAGGAGAAGCAAG...CTGCAGCTGGGGCCTGTGGGATGCCTTGGGAATCTCCCCTCCATCTTCACTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TCTGGGGTAAGTGTGTGGGGACAGGGTTATGGGCAGAAGAAAGATGACAAAGGGTCCAGGAACTCCACCTaGCTCTGCAGAGCTTGTAGC +
Preference number: 4 (lower is better)
Translates to: SGVSVWGQGYGQKKDDKGSRNST*LCRACS
Trigger: GCTACAAGCTCTGCAGAGCCAGGTGGAGTTCCTGGA...CCCTTTGTCATCTTTCTTCTGCCCATAACCCTGTCCCCACACACTTACCCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GAAGGGGCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCCGCTCATCTCCTCCTTaGTGTCACGAAGCTGTCGCT +
Preference number: 4 (lower is better)
Translates to: EGAFYFLTSIRSTGRAQPRSSPP*CHEAVA
Trigger: AGCGACAGCTTCGTGACACCAAGGAGGAGATGAGCG...GGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGCCCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp ACAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTCCATCTCATCCTCAATaGCAGCTTGCAAGTCCCCAA +
Preference number: 4 (lower is better)
Translates to: TESQGVFHADRQSGGGSGPSHPQ*QLASPQ
Trigger: TTGGGGACTTGCAAGCTGCCATTGAGGATGAGATGG...ACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TCTGGGGTAAGTGTGTGGGGACAGGGTTATGGGCAGAAGAAAGATGACAAAGGGGTGGCTTCCAGTGGCTaGTTGGGCTGGAACTCTTCA +
Preference number: 4 (lower is better)
Translates to: SGVSVWGQGYGQKKDDKGVASSG*LGWNSS
Trigger: TGAAGAGTTCCAGCCCAACCAGCCACTGGAAGCCAC...CCCTTTGTCATCTTTCTTCTGCCCATAACCCTGTCCCCACACACTTACCCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TTAGGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACTGGGTCAGGGGCGAGTaGCTTCCAGTGGCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: LGLQSDKQTKTSTFHCAHWVRGE*LPVAGW
Trigger: CCAACCAGCCACTGGAAGCCACTCGCCCCTGACCCA...GTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GAAGGGGCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCTGGTCTCTGTCAGCTTaGCCTCTGTGTCGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: EGAFYFLTSIRSTGRAQPWSLSA*PLCRCH
Trigger: GTGACAGCGACACAGAGGCCAAGCTGACAGAGACCA...GGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGCCCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CACTCAGATAGCTGTGGGAGAACCGGGGTCTGGAGATGCTGTCCACAGGATCATCAACCCCTGAGAAGATaGAGCTACAATCGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: HSDSCGRTGVWRCCPQDHQPLRR*SYNRPA
Trigger: AGCTGGACGATTGTAGCTCCATCTTCTCAGGGGTTG...ATGATCCTGTGGACAGCATCTCCAGACCCCGGTTCTCCCACAGCTATCTGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS-3UTR TCA 90 bp GGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACTGGCACTGCCATTCATaGTGGTGGGGCTGTTCCCAA +
Preference number: 4 (lower is better)
Translates to: GLQSDKQTKTSTFHCAHHWHCHS*WWGCSQ
Trigger: TTGGGAACAGCCCCACCATCATGAATGGCAGTGCCA...GTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGTACAAAGCAATGAGTGCTGGCTGGACTTaGGAGCCCTGTTTACCAGGG +
Preference number: 4 (lower is better)
Translates to: LTSIRSTGRAQPNEYKAMSAGWT*EPCLPG
Trigger: CCCTGGTAAACAGGGCTCTCAAGTCCAGCCAGCACT...CATTGCTTTGTACTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp TTAGGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCGGCCATGCCGGTGGTaGAGGTTTTCCTCATGCTGG +
Preference number: 4 (lower is better)
Translates to: LGLQSDKQTKTSTFHCAHRPCRW*RFSSCW
Trigger: CCAGCATGAGGAAAACCTTCACCACCGGCATGGCCG...GTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp TCTGGGGTAAGTGTGTGGGGACAGGGTTATGGGCAGAAGAAAGATGACAAAGGGTCGGATCTGCTCCTCTaGCAGCTGAACTTGGATGAG +
Preference number: 4 (lower is better)
Translates to: SGVSVWGQGYGQKKDDKGSDLLL*QLNLDE
Trigger: CTCATCCAAGTTCAGCTGTCAGAGGAGCAGATCCGA...CCCTTTGTCATCTTTCTTCTGCCCATAACCCTGTCCCCACACACTTACCCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp TTAGGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCCTCTTCCTGGTCCTTaGCCTTGGCCTCCAAGTCCC +
Preference number: 4 (lower is better)
Translates to: LGLQSDKQTKTSTFHCAHPLPGP*PWPPSP
Trigger: GGGACTTGGAGGCCAAGGTCAAGGACCAGGAAGAGG...GTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp TCTGGGGTAAGTGTGTGGGGACAGGGTTATGGGCAGAAGAAAGATGACAAAGGGTCTCCATGGTTTCTTTaGGCCGACTGGCCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: SGVSVWGQGYGQKKDDKGSPWFL*ADWPGS
Trigger: AGAACCTGGCCAGTCGGCTCAAAGAAACCATGGAGA...CCCTTTGTCATCTTTCTTCTGCCCATAACCCTGTCCCCACACACTTACCCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACAGGCACTGGAGCTGGCTGTaGTTAGGTGTCCTGAGTCCA +
Preference number: 4 (lower is better)
Translates to: LQSDKQTKTSTFHCAHHRHWSWL*LGVLSP
Trigger: TGGACTCAGGACACCTAAGCACAGCCAGCTCCAGTG...CCTGTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
CDS-3UTR GCA 90 bp GCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGGTCCTGGTCGAGGAATaGCTAGCCCAGGATGCTGCA +
Preference number: 4 (lower is better)
Translates to: AFYFLTSIRSTGRAQPNEVLVEE*LAQDAA
Trigger: TGCAGCATCCTGGGCTAGGCATTCCTCGACCAGGAC...CTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
CDS-3UTR GCA 90 bp CAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCACCCCTTGAACATGTaGATCACCTTCTCTGAATAC +
Preference number: 4 (lower is better)
Translates to: QKAKVFSMQIGSQVGAVVHPLNM*ITFSEY
Trigger: GTATTCAGAGAAGGTGATGCACATGTTCAAGGGGTG...CACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACAGGGTGGACAGAGCCTaGCACTTCTCCACTGAGAAC +
Preference number: 4 (lower is better)
Translates to: GLQSDKQTKTSTFHCAHHRVDRA*HFSTEN
Trigger: GTTCTCAGTGGAGAAGTGGCAGGCTCTGTCCACCCT...GTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGAAACACATTGTTCTCTaGCAAGTGGTTCAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: QKAKVFSMQIGSQVGAVVKHIVL*QVVQVE
Trigger: CTCCACCTGAACCACTTGGCAGAGAACAATGTGTTT...CACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTAAATAACTGCTCATTGCACCTTACTGAACTGCTGTaGAGCCTTCTGCTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: PRVGAGGRDQLLNNCSLHLTELL*SLLLLL
Trigger: GAGGAGAAGCAGAAGGCTGCACAGCAGTTCAGTAAG...GTGCAATGAGCAGTTATTTAAGAGCTGATCTCTTCCACCTGCACCCACCCGCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGAAGTGAAGATGGAGGGGAGATTCCCAAGGCATCCCACAGGCCCCAGCTGCAGATGAGGGCATCTACTTaGAGCTTAATCTGTATGCAC +
Preference number: 4 (lower is better)
Translates to: RSEDGGEIPKASHRPQLQMRAST*SLICMH
Trigger: GTGCATACAGATTAAGCTGCAAGTAGATGCCCTCAT...CTGCAGCTGGGGCCTGTGGGATGCCTTGGGAATCTCCCCTCCATCTTCACTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp ACAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTTTCTTGATGTTCTTCTaGACACAGCGAATGGCCAGG +
Preference number: 4 (lower is better)
Translates to: TESQGVFHADRQSGGGSGFLMFF*TQRMAR
Trigger: CCTGGCCATTCGCTGTGTGCAGAAGAACATCAAGAA...ACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACAGGCCACCTTCTCAAGCTTaGTGCGCAGCTGCTGGATCT +
Preference number: 4 (lower is better)
Translates to: LQSDKQTKTSTFHCAHHRPPSQA*CAAAGS
Trigger: AGATCCAGCAGCTGCGCAGCAAGCTTGAGAAGGTGG...CCTGTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GAGTACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGTCCATCACCTCCATCTaGTTCTTCAGTGCGTCATAC +
Preference number: 4 (lower is better)
Translates to: EYKAMAEGKGDGKQVQHQSITSI*FFSASY
Trigger: GTATGACGCACTGAAGAAGCAGATGGAGGTGATGGA...CTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGTACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGTACAAAGCAATGTCTCCAGCTGCCTCCTaGTCTGCTGTTCCACCTCCA +
Preference number: 4 (lower is better)
Translates to: LTSIRSTGRAQPNEYKAMSPAAS*SAVPPP
Trigger: TGGAGGTGGAACAGCAGAGCAGGAGGCAGCTGGAGA...CATTGCTTTGTACTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TCTGGGGTAAGTGTGTGGGGACAGGGTTATGGGCAGAAGAAAGATGACAAAGGGACTCTCATCACTATCTaGTTGCAGGTCCCCAAGCCG +
Preference number: 4 (lower is better)
Translates to: SGVSVWGQGYGQKKDDKGTLITI*LQVPKP
Trigger: CGGCTTGGGGACCTGCAAGCAGATAGTGATGAGAGT...CCCTTTGTCATCTTTCTTCTGCCCATAACCCTGTCCCCACACACTTACCCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACAGGCTGTCGAACCTCCTCTaGTTCTTCTCCAGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: LQSDKQTKTSTFHCAHHRLSNLL*FFSSSW
Trigger: CCACGAGCTGGAGAAGAAGCAGAGGAGGTTCGACAG...CCTGTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGTACTCCTCCTCGAGCTaGACTTCCATCTGTTTTAAC +
Preference number: 4 (lower is better)
Translates to: QKAKVFSMQIGSQVGAVVYSSSS*TSICFN
Trigger: GTTAAAACAGATGGAAGTGCAGCTCGAGGAGGAGTA...CACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGCATGATCTGGGCATCTaGCAGCAGCGCTTTGGTGCG +
Preference number: 4 (lower is better)
Translates to: AFYFLTSIRSTGRAQPNEHDLGI*QQRFGA
Trigger: CGCACCAAAGCGCTGCTGGCAGATGCCCAGATCATG...CTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGTACAAAGCAATGGGCCTGGGCCACAGCTaGCTTGTGCTTCTTCATCAG +
Preference number: 4 (lower is better)
Translates to: LTSIRSTGRAQPNEYKAMGLGHS*LVLLHQ
Trigger: CTGATGAAGAAGCACAAGGCAGCTGTGGCCCAGGCC...CATTGCTTTGTACTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TTAGGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACCAGTCGATCTCCTaGTACCAGCCCCAAGGCCAG +
Preference number: 4 (lower is better)
Translates to: LGLQSDKQTKTSTFHCAHHQSIS*YQPQGQ
Trigger: CTGGCCTTGGGGCTGGTACCAGGAGATCGACTGGTG...GTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
CDS-3UTR CCA 90 bp TTAGGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACGCCACCTGGCCAGCTTaGTCAAAGTCCAGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: LGLQSDKQTKTSTFHCAHATWPA*SKSRER
Trigger: CCTCTCCCTGGACTTTGACCAAGCTGGCCAGGTGGC...GTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp ACAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGTGCCTCCTTTTAGCTaGTGTTTGAAGATAGCCGAG +
Preference number: 4 (lower is better)
Translates to: TESQGVFHADRQSGGGSGVPPFS*CLKIAE
Trigger: CTCGGCTATCTTCAAACACCAGCTAAAAGGAGGCAC...ACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGTTGGTACCGTGGCTGTaGCCCAGGAGAAAGTGCCGA +
Preference number: 4 (lower is better)
Translates to: AFYFLTSIRSTGRAQPNELVPWL*PRRKCR
Trigger: TCGGCACTTTCTCCTGGGCCACAGCCACGGTACCAA...CTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGTACAAAGCAATGTGTACTCCACCCAGTTaGTACCGTGGCTGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: LTSIRSTGRAQPNEYKAMCTPPS*YRGCGP
Trigger: TGGGCCACAGCCACGGTACCAACTGGGTGGAGTACA...CATTGCTTTGTACTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGGGGGTGCATTCTGGGTaGCTGGGTTCTGCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: AFYFLTSIRSTGRAQPNEGVHSG*LGSAWC
Trigger: ACACCAAGCAGAACCCAGCCACCCAGAATGCACCCC...CTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTAAATAACTGCTCATTGCACCTGATGATCTTTTTCTaGGAGTCCTGCAGAAGCCGG +
Preference number: 4 (lower is better)
Translates to: PRVGAGGRDQLLNNCSLHLMIFF*ESCRSR
Trigger: CCGGCTTCTGCAGGACTCCCAGAAAAAGATCATCAG...GTGCAATGAGCAGTTATTTAAGAGCTGATCTCTTCCACCTGCACCCACCCGCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGTACAAAGCAATGTTCTTCTCCAGCTCGTaGTTTCGGACCTGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: LTSIRSTGRAQPNEYKAMFFSSS*FRTCWP
Trigger: GGGCCAGCAGGTCCGAAACCACGAGCTGGAGAAGAA...CATTGCTTTGTACTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGGTCTCCTCGTGGGCCTaGGAAAGCTCACTGTCGAAC +
Preference number: 4 (lower is better)
Translates to: AFYFLTSIRSTGRAQPNEVSSWA*ESSLSN
Trigger: GTTCGACAGTGAGCTTTCCCAGGCCCACGAGGAGAC...CTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACATGTCCTTCTCCCGCTaGAGTTTCTCCCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: GLQSDKQTKTSTFHCAHHMSFSR*SFSLCS
Trigger: GCTGCAGAGGGAGAAACTCCAGCGGGAGAAGGACAT...GTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp ACAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGACTCTCCATCTCCTTaGAATGGGTCTGTCTCATTC +
Preference number: 4 (lower is better)
Translates to: TESQGVFHADRQSGGGSGDSPSP*NGSVSF
Trigger: GAATGAGACAGACCCATTCCAAGGAGATGGAGAGTC...ACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GAAGGGGCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCGATTCAAAGTCCCGCTaGTTCACCTGGTCACTGAGC +
Preference number: 4 (lower is better)
Translates to: EGAFYFLTSIRSTGRAQPDSKSR*FTWSLS
Trigger: GCTCAGTGACCAGGTGAACCAGCGGGACTTTGAATC...GGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGCCCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCGCATTGTTCTTTAAGTaGTCCAGCATGATCTGGGCA +
Preference number: 4 (lower is better)
Translates to: RKPRCFPCRSAVRWGQWCALFFK*SSMIWA
Trigger: TGCCCAGATCATGCTGGACCACTTAAAGAACAATGC...GCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GAAGGGGCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAGCTGGTTCTTCAGCTaGGCAATCTCCCTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: EGAFYFLTSIRSTGRAQPSWFFS*AISLLL
Trigger: GAGCAAGAGGGAGATTGCCCAGCTGAAGAACCAGCT...GGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGCCCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTAAATAACTGCTCATTGCACGCGCTGTCTTGGCTTTaGCGATGTCATCAATCTGCA +
Preference number: 4 (lower is better)
Translates to: PRVGAGGRDQLLNNCSLHALSWL*RCHQSA
Trigger: TGCAGATTGATGACATCGCCAAAGCCAAGACAGCGC...GTGCAATGAGCAGTTATTTAAGAGCTGATCTCTTCCACCTGCACCCACCCGCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCTTGCTTCTCCTTGTTaGACTCTTCAATCTGAGCCT +
Preference number: 4 (lower is better)
Translates to: QKAKVFSMQIGSQVGAVVLASPC*TLQSEP
Trigger: AGGCTCAGATTGAAGAGTCCAACAAGGAGAAGCAAG...CACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCTTGCTTCTCCTTGTTaGACTCTTCAATCTGAGCCT +
Preference number: 4 (lower is better)
Translates to: RKPRCFPCRSAVRWGQWCLASPC*TLQSEP
Trigger: AGGCTCAGATTGAAGAGTCCAACAAGGAGAAGCAAG...GCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACCGCTCATCTCCTCCTTaGTGTCACGAAGCTGTCGCT +
Preference number: 4 (lower is better)
Translates to: GLQSDKQTKTSTFHCAHHRSSPP*CHEAVA
Trigger: AGCGACAGCTTCGTGACACCAAGGAGGAGATGAGCG...GTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACAGGCGCTCATCTCCTCCTTaGTGTCACGAAGCTGTCGCT +
Preference number: 4 (lower is better)
Translates to: LQSDKQTKTSTFHCAHHRRSSPP*CHEAVA
Trigger: AGCGACAGCTTCGTGACACCAAGGAGGAGATGAGCG...CCTGTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACAGGTCGGCTTGCAGGCTTTaGTTAGCAGCTTCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: LQSDKQTKTSTFHCAHHRSACRL*LAASRL
Trigger: GAGCCTGGAAGCTGCTAACCAAAGCCTGCAAGCCGA...CCTGTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACAGGGTGGCTTCCAGTGGCTaGTTGGGCTGGAACTCTTCA +
Preference number: 4 (lower is better)
Translates to: LQSDKQTKTSTFHCAHHRVASSG*LGWNSS
Trigger: TGAAGAGTTCCAGCCCAACCAGCCACTGGAAGCCAC...CCTGTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACAGGTGGTCTCTGTCAGCTTaGCCTCTGTGTCGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: LQSDKQTKTSTFHCAHHRWSLSA*PLCRCH
Trigger: GTGACAGCGACACAGAGGCCAAGCTGACAGAGACCA...CCTGTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACAGGCTGAGGACTCCTAGGTaGAGCACTGCCGTCCTTAGA +
Preference number: 4 (lower is better)
Translates to: LQSDKQTKTSTFHCAHHRLRTPR*STAVLR
Trigger: TCTAAGGACGGCAGTGCTCCACCTAGGAGTCCTCAG...CCTGTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000167856.8
CDS-3UTR TCA 90 bp GAAGGGGCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCTCATCCCGGCTCCGTTaGGAGAAGGAAAAACGTTTG +
Preference number: 4 (lower is better)
Translates to: EGAFYFLTSIRSTGRAQPSSRLR*EKEKRL
Trigger: CAAACGTTTTTCCTTCTCTCAACGGAGCCGGGATGA...GGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGCCCCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
CDS-3UTR TCA 90 bp TCTGGGGTAAGTGTGTGGGGACAGGGTTATGGGCAGAAGAAAGATGACAAAGGGTCATCCCGGCTCCGTTaGGAGAAGGAAAAACGTTTG +
Preference number: 4 (lower is better)
Translates to: SGVSVWGQGYGQKKDDKGSSRLR*EKEKRL
Trigger: CAAACGTTTTTCCTTCTCTCAACGGAGCCGGGATGA...CCCTTTGTCATCTTTCTTCTGCCCATAACCCTGTCCCCACACACTTACCCCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
CDS-3UTR TCA 90 bp TTAGGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACGGTTGTGCGCCGCAGTaGGAAGCCAAAGTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: LGLQSDKQTKTSTFHCAHGCAPQ*EAKVSC
Trigger: ACAGGAGACTTTGGCTTCTCACTGCGGCGCACAACC...GTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
CDS-3UTR TCA 90 bp CTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGTACAAAGCAATGTGGCACTGCCATTCATaGTGGTGGGGCTGTTCCCAA +
Preference number: 4 (lower is better)
Translates to: LTSIRSTGRAQPNEYKAMWHCHS*WWGCSQ
Trigger: TTGGGAACAGCCCCACCATCATGAATGGCAGTGCCA...CATTGCTTTGTACTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AGCTTTATGGTAAGAAACCGAGAAGTAACAAGTAACAGACCACTTGTTGCTGTGGGTGGAGCTCTGTCCTaGGGGTGGCATCCCCACAGG +
Preference number: 4 (lower is better)
Translates to: SFMVRNREVTSNRPLVAVGGALS*GWHPHR
Trigger: CCTGTGGGGATGCCACCCTCAGGACAGAGCTCCACC...CACAGCAACAAGTGGTCTGTTACTTGTTACTTCTCGGTTTCTTACCATAAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AGCTTTATGGTAAGAAACCGAGAAGTAACAAGTAACAGACCACTTGTTGCTGTGGCCTGCAATCGAGCCTaGGAGCACCGTGGCACTGCC +
Preference number: 4 (lower is better)
Translates to: SFMVRNREVTSNRPLVAVACNRA*EHRGTA
Trigger: GGCAGTGCCACGGTGCTCTCAGGCTCGATTGCAGGC...CACAGCAACAAGTGGTCTGTTACTTGTTACTTCTCGGTTTCTTACCATAAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp GGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACTCGGATCTGCTCCTCTaGCAGCTGAACTTGGATGAG +
Preference number: 4 (lower is better)
Translates to: GLQSDKQTKTSTFHCAHHSDLLL*QLNLDE
Trigger: CTCATCCAAGTTCAGCTGTCAGAGGAGCAGATCCGA...GTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp GGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACTCTCCATGGTTTCTTTaGGCCGACTGGCCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: GLQSDKQTKTSTFHCAHHSPWFL*ADWPGS
Trigger: AGAACCTGGCCAGTCGGCTCAAAGAAACCATGGAGA...GTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGTACAAAGCAATGGATCCAGCATGGTTGTaGGCCGCAGTGAGAAGCCAA +
Preference number: 4 (lower is better)
Translates to: LTSIRSTGRAQPNEYKAMDPAWL*AAVRSQ
Trigger: TTGGCTTCTCACTGCGGCGCACAACCATGCTGGATC...CATTGCTTTGTACTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
CDS-3UTR GCA 90 bp CTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGTACAAAGCAATGAGGGTGGACAGAGCCTaGCACTTCTCCACTGAGAAC +
Preference number: 4 (lower is better)
Translates to: LTSIRSTGRAQPNEYKAMRVDRA*HFSTEN
Trigger: GTTCTCAGTGGAGAAGTGGCAGGCTCTGTCCACCCT...CATTGCTTTGTACTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TCTGGGGTAAGTGTGTGGGGACAGGGTTATGGGCAGAAGAAAGATGACAAAGGGTGGAGCTTACTGAACTaGTGTGCAGCCTTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: SGVSVWGQGYGQKKDDKGWSLLN*CAAFCF
Trigger: GAAGCAGAAGGCTGCACAGCAGTTCAGTAAGCTCCA...CCCTTTGTCATCTTTCTTCTGCCCATAACCCTGTCCCCACACACTTACCCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACTGGACCGTTGCAGGGTaGCTCCTTTTAGCTGGTGTT +
Preference number: 4 (lower is better)
Translates to: GLQSDKQTKTSTFHCAHHWTVAG*LLLAGV
Trigger: AACACCAGCTAAAAGGAGGCACCCTGCAACGGTCCA...GTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp ACAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTAAGCAGTGCACGAAATaGATCTTGGACCTCTTGATG +
Preference number: 4 (lower is better)
Translates to: TESQGVFHADRQSGGGSGKQCTK*ILDLLM
Trigger: CATCAAGAGGTCCAAGATGCATTTCGTGCACTGCTT...ACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGTACAAAGCAATGAACCTTGGCGGTACATaGGCATCGCATCAAGCAGGC +
Preference number: 4 (lower is better)
Translates to: LTSIRSTGRAQPNEYKAMNLGGT*ASHQAG
Trigger: GCCTGCTTGATGCGATGCGCATGTACCGCCAAGGTT...CATTGCTTTGTACTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGTACAAAGCAATGCCACCTTCTCAAGCTTaGTGCGCAGCTGCTGGATCT +
Preference number: 4 (lower is better)
Translates to: LTSIRSTGRAQPNEYKAMPPSQA*CAAAGS
Trigger: AGATCCAGCAGCTGCGCAGCAAGCTTGAGAAGGTGG...CATTGCTTTGTACTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTAAATAACTGCTCATTGCACTCCATCACCTCCATCTaGTTCTTCAGTGCGTCATAC +
Preference number: 4 (lower is better)
Translates to: PRVGAGGRDQLLNNCSLHSITSI*FFSASY
Trigger: GTATGACGCACTGAAGAAGCAGATGGAGGTGATGGA...GTGCAATGAGCAGTTATTTAAGAGCTGATCTCTTCCACCTGCACCCACCCGCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACAGGCTTGAGCTGCTGCAGTaGCCGTTGACTCTCATCACT +
Preference number: 4 (lower is better)
Translates to: LQSDKQTKTSTFHCAHHRLELLQ*PLTLIT
Trigger: AGTGATGAGAGTCAACGGGCACTGCAGCAGCTCAAG...CCTGTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCTTTTCCTCCATTTGCTaGTTCAAGCTGAAAGCCTCA +
Preference number: 4 (lower is better)
Translates to: RKPRCFPCRSAVRWGQWCFSSIC*FKLKAS
Trigger: TGAGGCTTTCAGCTTGAAGCAGCAAATGGAGGAAAA...GCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGTTTTCCTCCATTTGCTaGTTCAAGCTGAAAGCCTCA +
Preference number: 4 (lower is better)
Translates to: QKAKVFSMQIGSQVGAVVFSSIC*FKLKAS
Trigger: TGAGGCTTTCAGCTTGAAGCAGCAAATGGAGGAAAA...CACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TCTGGGGTAAGTGTGTGGGGACAGGGTTATGGGCAGAAGAAAGATGACAAAGGGGCGATGTCATCAATCTaGAGGTGCAGGTCTTCCATC +
Preference number: 4 (lower is better)
Translates to: SGVSVWGQGYGQKKDDKGAMSSI*RCRSSI
Trigger: GATGGAAGACCTGCACCTGCAGATTGATGACATCGC...CCCTTTGTCATCTTTCTTCTGCCCATAACCCTGTCCCCACACACTTACCCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACAGGTCCATCTCCAGTTCATaGTTCTTGCGGCTAGCCTCG +
Preference number: 4 (lower is better)
Translates to: LQSDKQTKTSTFHCAHHRSISSS*FLRLAS
Trigger: CGAGGCTAGCCGCAAGAAGCATGAACTGGAGATGGA...CCTGTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACTCCATCTCCAGTTCATaGTTCTTGCGGCTAGCCTCG +
Preference number: 4 (lower is better)
Translates to: GLQSDKQTKTSTFHCAHHSISSS*FLRLAS
Trigger: CGAGGCTAGCCGCAAGAAGCATGAACTGGAGATGGA...GTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TCTGGGGTAAGTGTGTGGGGACAGGGTTATGGGCAGAAGAAAGATGACAAAGGGTCCTCAATGGCAGCTTaGAAGTCCCCAATGCGTTTG +
Preference number: 4 (lower is better)
Translates to: SGVSVWGQGYGQKKDDKGSSMAA*KSPMRL
Trigger: CAAACGCATTGGGGACTTGCAAGCTGCCATTGAGGA...CCCTTTGTCATCTTTCTTCTGCCCATAACCCTGTCCCCACACACTTACCCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GAAGGGGCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCGCCATCGTCAGAAGGTaGCTTAGAAGGTCCCTTGTT +
Preference number: 4 (lower is better)
Translates to: EGAFYFLTSIRSTGRAQPAIVRR*LRRSLV
Trigger: AACAAGGGACCTTCTAAGGCACCTTCTGACGATGGC...GGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGCCCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AACCGGGGTCTGGAGATGCTGTCCACAGGATCATGCTCATCATCCGATGGGTCATTTGTCACCATGTCCTaGAAACTGTTGATGAGGTCC +
Preference number: 4 (lower is better)
Translates to: NRGLEMLSTGSCSSSDGSFVTMS*KLLMRS
Trigger: GGACCTCATCAACAGTTTGCAGGACATGGTGACAAA...TGACCCATCGGATGATGAGCATGATCCTGTGGACAGCATCTCCAGACCCCGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS-3UTR CCA 90 bp CCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTAAATAACTGCTCATTGCACAGCCAAAGTCTCCTGTaGGTCTTCGTTGTAACTCCA +
Preference number: 4 (lower is better)
Translates to: PRVGAGGRDQLLNNCSLHSQSLL*VFVVTP
Trigger: TGGAGTTACAACGAAGACCCACAGGAGACTTTGGCT...GTGCAATGAGCAGTTATTTAAGAGCTGATCTCTTCCACCTGCACCCACCCGCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
CDS-3UTR CCA 90 bp CTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGTACAAAGCAATGTATCTCTCCAACTCCTaGAGGAAGGTGCGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: LTSIRSTGRAQPNEYKAMYLSNS*RKVRSW
Trigger: CCACGAGCGCACCTTCCTCCAGGAGTTGGAGAGATA...CATTGCTTTGTACTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGTATCTCTCCAACTCCTaGAGGAAGGTGCGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: AFYFLTSIRSTGRAQPNEYLSNS*RKVRSW
Trigger: CCACGAGCGCACCTTCCTCCAGGAGTTGGAGAGATA...CTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACAGGTCTGCACACAGCGAATaGCCAGGTCCTGGATCTTTC +
Preference number: 4 (lower is better)
Translates to: LQSDKQTKTSTFHCAHHRSAHSE*PGPGSF
Trigger: GAAAGATCCAGGACCTGGCCATTCGCTGTGTGCAGA...CCTGTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGTACAAAGCAATGATGTCCTTCTCCCGCTaGAGTTTCTCCCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LTSIRSTGRAQPNEYKAMMSFSR*SFSLCS
Trigger: GCTGCAGAGGGAGAAACTCCAGCGGGAGAAGGACAT...CATTGCTTTGTACTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp ACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACGCATTGTTCTTTAAGTaGTCCAGCATGATCTGGGCA +
Preference number: 4 (lower is better)
Translates to: TKQWQKGRGMANRSSTRYALFFK*SSMIWA
Trigger: TGCCCAGATCATGCTGGACCACTTAAAGAACAATGC...GTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACAGGAGCTGGTTCTTCAGCTaGGCAATCTCCCTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: LQSDKQTKTSTFHCAHHRSWFFS*AISLLL
Trigger: GAGCAAGAGGGAGATTGCCCAGCTGAAGAACCAGCT...CCTGTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GAAGGGGCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCCCATCTCATCCTCAATaGCAGCTTGCAAGTCCCCAA +
Preference number: 4 (lower is better)
Translates to: EGAFYFLTSIRSTGRAQPPSHPQ*QLASPQ
Trigger: TTGGGGACTTGCAAGCTGCCATTGAGGATGAGATGG...GGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGCCCCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGTACAAAGCAATGTGGTCTCTGTCAGCTTaGCCTCTGTGTCGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: LTSIRSTGRAQPNEYKAMWSLSA*PLCRCH
Trigger: GTGACAGCGACACAGAGGCCAAGCTGACAGAGACCA...CATTGCTTTGTACTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp GAAGGGGCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCCGTTTGACAATCATCTaGGAGTTCTGCTTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: EGAFYFLTSIRSTGRAQPRLTII*EFCLAS
Trigger: ACTGGCCAAGCAGAACTCTCAGATGATTGTCAAACG...GGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGCCCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
CDS-3UTR TCA 90 bp GGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACTACTGCACCAGATGCTaGAAGCTGGTAGTCTTGCCA +
Preference number: 4 (lower is better)
Translates to: GLQSDKQTKTSTFHCAHHYCTRC*KLVVLP
Trigger: TGGCAAGACTACCAGCTTTCAGCATCTGGTGCAGTA...GTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACAGGTACTGCACCAGATGCTaGAAGCTGGTAGTCTTGCCA +
Preference number: 4 (lower is better)
Translates to: LQSDKQTKTSTFHCAHHRYCTRC*KLVVLP
Trigger: TGGCAAGACTACCAGCTTTCAGCATCTGGTGCAGTA...CCTGTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGTACAAAGCAATGAGATGGAAGCCAGGATaGGCCAGCAGGTCTTCTGTT +
Preference number: 4 (lower is better)
Translates to: LTSIRSTGRAQPNEYKAMRWKPG*ASRSSV
Trigger: AACAGAAGACCTGCTGGCTCATCCTGGCTTCCATCT...CATTGCTTTGTACTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp GCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGTTTGCTGCTTCAAGCTaGAAGCCTCAGCCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: AFYFLTSIRSTGRAQPNEFAASS*KPQPGA
Trigger: TGCTCCTGGCTGAGGCTTTCAGCTTGAAGCAGCAAA...CTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGATGCCTAGCCCAGGATaGTGCATTAGCTGTCCCTCA +
Preference number: 4 (lower is better)
Translates to: AFYFLTSIRSTGRAQPNEMPSPG*CISCPS
Trigger: TGAGGGACAGCTAATGCAGCATCCTGGGCTAGGCAT...CTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
CDS-3UTR GCA 90 bp TTAGGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACGATCCAGCATGGTTGTaGGCCGCAGTGAGAAGCCAA +
Preference number: 4 (lower is better)
Translates to: LGLQSDKQTKTSTFHCAHDPAWL*AAVRSQ
Trigger: TTGGCTTCTCACTGCGGCGCACAACCATGCTGGATC...GTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
CDS-3UTR GCA 90 bp TTAGGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACTGCTGTGCAGCCTTCTaGTTCTCCTCAGGCTTGGAC +
Preference number: 4 (lower is better)
Translates to: LGLQSDKQTKTSTFHCAHCCAAF*FSSGLD
Trigger: GTCCAAGCCTGAGGAGAAGCAGAAGGCTGCACAGCA...GTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACTGGAGCTTACTGAACTaGTGTGCAGCCTTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: GLQSDKQTKTSTFHCAHHWSLLN*CAAFCF
Trigger: GAAGCAGAAGGCTGCACAGCAGTTCAGTAAGCTCCA...GTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGTACAAAGCAATGTGGACCGTTGCAGGGTaGCTCCTTTTAGCTGGTGTT +
Preference number: 4 (lower is better)
Translates to: LTSIRSTGRAQPNEYKAMWTVAG*LLLAGV
Trigger: AACACCAGCTAAAAGGAGGCACCCTGCAACGGTCCA...CATTGCTTTGTACTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp ACAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTATGAGGGCATCTACTTaGAGCTTAATCTGTATGCAC +
Preference number: 4 (lower is better)
Translates to: TESQGVFHADRQSGGGSGMRAST*SLICMH
Trigger: GTGCATACAGATTAAGCTGCAAGTAGATGCCCTCAT...ACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTAAATAACTGCTCATTGCACAAGCAGTGCACGAAATaGATCTTGGACCTCTTGATG +
Preference number: 4 (lower is better)
Translates to: PRVGAGGRDQLLNNCSLHKQCTK*ILDLLM
Trigger: CATCAAGAGGTCCAAGATGCATTTCGTGCACTGCTT...GTGCAATGAGCAGTTATTTAAGAGCTGATCTCTTCCACCTGCACCCACCCGCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGCTTTATGGTAAGAAACCGAGAAGTAACAAGTAACAGACCACTTGTTGCTGTGCCAACCGTGCCAACGTaGCTGCCCGGAAGAACACCC +
Preference number: 4 (lower is better)
Translates to: SFMVRNREVTSNRPLVAVPTVPT*LPGRTP
Trigger: GGGTGTTCTTCCGGGCAGGCACGTTGGCACGGTTGG...CACAGCAACAAGTGGTCTGTTACTTGTTACTTCTCGGTTTCTTACCATAAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GAAGGGGCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCTTCTTGATGTTCTTCTaGACACAGCGAATGGCCAGG +
Preference number: 4 (lower is better)
Translates to: EGAFYFLTSIRSTGRAQPFLMFF*TQRMAR
Trigger: CCTGGCCATTCGCTGTGTGCAGAAGAACATCAAGAA...GGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGCCCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TTAGGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCCACCTTCTCAAGCTTaGTGCGCAGCTGCTGGATCT +
Preference number: 4 (lower is better)
Translates to: LGLQSDKQTKTSTFHCAHPPSQA*CAAAGS
Trigger: AGATCCAGCAGCTGCGCAGCAAGCTTGAGAAGGTGG...GTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGCTTTATGGTAAGAAACCGAGAAGTAACAAGTAACAGACCACTTGTTGCTGTGCCCGTTGATCTCGGCTaGCCGAATGAGCCGGGCTTC +
Preference number: 4 (lower is better)
Translates to: SFMVRNREVTSNRPLVAVPVDLG*PNEPGF
Trigger: GAAGCCCGGCTCATTCGGGCAGCCGAGATCAACGGG...CACAGCAACAAGTGGTCTGTTACTTGTTACTTCTCGGTTTCTTACCATAAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGTACAAAGCAATGACTCTCATCACTATCTaGTTGCAGGTCCCCAAGCCG +
Preference number: 4 (lower is better)
Translates to: LTSIRSTGRAQPNEYKAMTLITI*LQVPKP
Trigger: CGGCTTGGGGACCTGCAAGCAGATAGTGATGAGAGT...CATTGCTTTGTACTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACAGGTGCCTTTACAGCTGCTaGACAGGTGAATTCCGACTC +
Preference number: 4 (lower is better)
Translates to: LQSDKQTKTSTFHCAHHRCLYSC*TGEFRL
Trigger: GAGTCGGAATTCACCTGTGCAGCAGCTGTAAAGGCA...CCTGTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACTCATCAATCTGCAGGTaGAGGTCTTCCATCTCCACC +
Preference number: 4 (lower is better)
Translates to: GLQSDKQTKTSTFHCAHHSSICR*RSSIST
Trigger: GGTGGAGATGGAAGACCTGCACCTGCAGATTGATGA...GTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACAGGGCGATGTCATCAATCTaGAGGTGCAGGTCTTCCATC +
Preference number: 4 (lower is better)
Translates to: LQSDKQTKTSTFHCAHHRAMSSI*RCRSSI
Trigger: GATGGAAGACCTGCACCTGCAGATTGATGACATCGC...CCTGTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACGCCACAGCTGCCTTGTaGTTCTTCATCAGCTCATTC +
Preference number: 4 (lower is better)
Translates to: GLQSDKQTKTSTFHCAHHATAAL*FFISSF
Trigger: GAATGAGCTGATGAAGAAGCACAAGGCAGCTGTGGC...GTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACAGGTACCCAGAAGGACAATaGACTGGTCCTGACGACTCA +
Preference number: 4 (lower is better)
Translates to: LQSDKQTKTSTFHCAHHRYPEGQ*TGPDDS
Trigger: TGAGTCGTCAGGACCAGTCCATTGTCCTTCTGGGTA...CCTGTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTAAATAACTGCTCATTGCACCTCAGGCTTGGACAGTaGCACAATTCCAAACACATT +
Preference number: 4 (lower is better)
Translates to: PRVGAGGRDQLLNNCSLHLRLGQ*HNSKHI
Trigger: AATGTGTTTGGAATTGTGCCACTGTCCAAGCCTGAG...GTGCAATGAGCAGTTATTTAAGAGCTGATCTCTTCCACCTGCACCCACCCGCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGCTTTATGGTAAGAAACCGAGAAGTAACAAGTAACAGACCACTTGTTGCTGTGCCAGAGCACTCAGTTTaGTGCCCTCTCCCAGGCCGC +
Preference number: 4 (lower is better)
Translates to: SFMVRNREVTSNRPLVAVPEHSV*CPLPGR
Trigger: GCGGCCTGGGAGAGGGCACCAAACTGAGTGCTCTGG...CACAGCAACAAGTGGTCTGTTACTTGTTACTTCTCGGTTTCTTACCATAAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGTGGCTGGGTTCTGCTTaGTGTAATTCAGCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: AFYFLTSIRSTGRAQPNEWLGSA*CNSASQ
Trigger: CTGGCTGGCTGAATTACACCAAGCAGAACCCAGCCA...CTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACCTGATGATCTTTTTCTaGGAGTCCTGCAGAAGCCGG +
Preference number: 4 (lower is better)
Translates to: GLQSDKQTKTSTFHCAHHLMIFF*ESCRSR
Trigger: CCGGCTTCTGCAGGACTCCCAGAAAAAGATCATCAG...GTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TCTGGGGTAAGTGTGTGGGGACAGGGTTATGGGCAGAAGAAAGATGACAAAGGGTCCATCTCCTTGGAATaGGTCTGTCTCATTCTCTCC +
Preference number: 4 (lower is better)
Translates to: SGVSVWGQGYGQKKDDKGSISLE*VCLILS
Trigger: GGAGAGAATGAGACAGACCCATTCCAAGGAGATGGA...CCCTTTGTCATCTTTCTTCTGCCCATAACCCTGTCCCCACACACTTACCCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGGATTCAAAGTCCCGCTaGTTCACCTGGTCACTGAGC +
Preference number: 4 (lower is better)
Translates to: AFYFLTSIRSTGRAQPNEDSKSR*FTWSLS
Trigger: GCTCAGTGACCAGGTGAACCAGCGGGACTTTGAATC...CTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGTACAAAGCAATGGATTCAAAGTCCCGCTaGTTCACCTGGTCACTGAGC +
Preference number: 4 (lower is better)
Translates to: LTSIRSTGRAQPNEYKAMDSKSR*FTWSLS
Trigger: GCTCAGTGACCAGGTGAACCAGCGGGACTTTGAATC...CATTGCTTTGTACTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTAAATAACTGCTCATTGCACGCATTGTTCTTTAAGTaGTCCAGCATGATCTGGGCA +
Preference number: 4 (lower is better)
Translates to: PRVGAGGRDQLLNNCSLHALFFK*SSMIWA
Trigger: TGCCCAGATCATGCTGGACCACTTAAAGAACAATGC...GTGCAATGAGCAGTTATTTAAGAGCTGATCTCTTCCACCTGCACCCACCCGCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGAGCTGGTTCTTCAGCTaGGCAATCTCCCTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: AFYFLTSIRSTGRAQPNESWFFS*AISLLL
Trigger: GAGCAAGAGGGAGATTGCCCAGCTGAAGAACCAGCT...CTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGTACAAAGCAATGAGCTGGTTCTTCAGCTaGGCAATCTCCCTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: LTSIRSTGRAQPNEYKAMSWFFS*AISLLL
Trigger: GAGCAAGAGGGAGATTGCCCAGCTGAAGAACCAGCT...CATTGCTTTGTACTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACAGGGCGCTGTCTTGGCTTTaGCGATGTCATCAATCTGCA +
Preference number: 4 (lower is better)
Translates to: LQSDKQTKTSTFHCAHHRALSWL*RCHQSA
Trigger: TGCAGATTGATGACATCGCCAAAGCCAAGACAGCGC...CCTGTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACAGGCCATCTCATCCTCAATaGCAGCTTGCAAGTCCCCAA +
Preference number: 4 (lower is better)
Translates to: LQSDKQTKTSTFHCAHHRPSHPQ*QLASPQ
Trigger: TTGGGGACTTGCAAGCTGCCATTGAGGATGAGATGG...CCTGTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp TTAGGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACAGATGGAAGCCAGGATaGGCCAGCAGGTCTTCTGTT +
Preference number: 4 (lower is better)
Translates to: LGLQSDKQTKTSTFHCAHRWKPG*ASRSSV
Trigger: AACAGAAGACCTGCTGGCTCATCCTGGCTTCCATCT...GTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AGCTTTATGGTAAGAAACCGAGAAGTAACAAGTAACAGACCACTTGTTGCTGTGCGGCCATGCCGGTGGTaGAGGTTTTCCTCATGCTGG +
Preference number: 4 (lower is better)
Translates to: SFMVRNREVTSNRPLVAVRPCRW*RFSSCW
Trigger: CCAGCATGAGGAAAACCTTCACCACCGGCATGGCCG...CACAGCAACAAGTGGTCTGTTACTTGTTACTTCTCGGTTTCTTACCATAAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AGCTTTATGGTAAGAAACCGAGAAGTAACAAGTAACAGACCACTTGTTGCTGTGTGCTCCTCTGACAGCTaGACTTGGATGAGGGGCCGC +
Preference number: 4 (lower is better)
Translates to: SFMVRNREVTSNRPLVAVCSSDS*TWMRGR
Trigger: GCGGCCCCTCATCCAAGTTCAGCTGTCAGAGGAGCA...CACAGCAACAAGTGGTCTGTTACTTGTTACTTCTCGGTTTCTTACCATAAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp TTAGGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACTGCTGCAGTGCCCGTTaGCTCTCATCACTATCTGCT +
Preference number: 4 (lower is better)
Translates to: LGLQSDKQTKTSTFHCAHCCSAR*LSSLSA
Trigger: AGCAGATAGTGATGAGAGTCAACGGGCACTGCAGCA...GTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp TTAGGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACTTTGCTGCTTCAAGCTaGAAGCCTCAGCCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: LGLQSDKQTKTSTFHCAHFAASS*KPQPGA
Trigger: TGCTCCTGGCTGAGGCTTTCAGCTTGAAGCAGCAAA...GTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp CTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACAGGTGTTTTAACTTCTTCTaGCATGACTGCCGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: LQSDKQTKTSTFHCAHHRCFNFF*HDCRAS
Trigger: AGAGGCCCGGCAGTCATGTCAGAAGAAGTTAAAACA...CCTGTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp GGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACTCTTCCAGCCGGTTTTaGATCTCGTTTTTCTCACGC +
Preference number: 4 (lower is better)
Translates to: GLQSDKQTKTSTFHCAHHSSSRF*ISFFSR
Trigger: GCGTGAGAAAAACGAGATTCAAAACCGGCTGGAAGA...GTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp TTAGGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACAGGTCCCTTGTTCTTTaGCAACCAGGACTTGACCCC +
Preference number: 4 (lower is better)
Translates to: LGLQSDKQTKTSTFHCAHRSLVL*QPGLDP
Trigger: GGGGTCAAGTCCTGGTTGTCAAAGAACAAGGGACCT...GTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGACACTGTCCCCAGACTaGCGGATCATCTCCACAATT +
Preference number: 4 (lower is better)
Translates to: AFYFLTSIRSTGRAQPNETLSPD*RIISTI
Trigger: AATTGTGGAGATGATCCGGCAGTCTGGGGACAGTGT...CTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
CDS-3UTR GCA 90 bp CTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGTACAAAGCAATGCTTACTGAACTGCTGTaGAGCCTTCTGCTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: LTSIRSTGRAQPNEYKAMLTELL*SLLLLL
Trigger: GAGGAGAAGCAGAAGGCTGCACAGCAGTTCAGTAAG...CATTGCTTTGTACTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGTACAAAGCAATGTGGAGCTTACTGAACTaGTGTGCAGCCTTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: LTSIRSTGRAQPNEYKAMWSLLN*CAAFCF
Trigger: GAAGCAGAAGGCTGCACAGCAGTTCAGTAAGCTCCA...CATTGCTTTGTACTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACTCCATCACCTCCATCTaGTTCTTCAGTGCGTCATAC +
Preference number: 4 (lower is better)
Translates to: GLQSDKQTKTSTFHCAHHSITSI*FFSASY
Trigger: GTATGACGCACTGAAGAAGCAGATGGAGGTGATGGA...GTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGTGCCTTTACAGCTGCTaGACAGGTGAATTCCGACTC +
Preference number: 4 (lower is better)
Translates to: AFYFLTSIRSTGRAQPNECLYSC*TGEFRL
Trigger: GAGTCGGAATTCACCTGTGCAGCAGCTGTAAAGGCA...CTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGGCGATGTCATCAATCTaGAGGTGCAGGTCTTCCATC +
Preference number: 4 (lower is better)
Translates to: AFYFLTSIRSTGRAQPNEAMSSI*RCRSSI
Trigger: GATGGAAGACCTGCACCTGCAGATTGATGACATCGC...CTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGCTTTATGGTAAGAAACCGAGAAGTAACAAGTAACAGACCACTTGTTGCTGTGCACCAGTCGATCTCCTaGTACCAGCCCCAAGGCCAG +
Preference number: 4 (lower is better)
Translates to: SFMVRNREVTSNRPLVAVHQSIS*YQPQGQ
Trigger: CTGGCCTTGGGGCTGGTACCAGGAGATCGACTGGTG...CACAGCAACAAGTGGTCTGTTACTTGTTACTTCTCGGTTTCTTACCATAAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
CDS-3UTR CCA 90 bp GAAGGGGCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCCTCAGGCTTGGACAGTaGCACAATTCCAAACACATT +
Preference number: 4 (lower is better)
Translates to: EGAFYFLTSIRSTGRAQPLRLGQ*HNSKHI
Trigger: AATGTGTTTGGAATTGTGCCACTGTCCAAGCCTGAG...GGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGCCCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TCTGGGGTAAGTGTGTGGGGACAGGGTTATGGGCAGAAGAAAGATGACAAAGGGCTCAGGCTTGGACAGTaGCACAATTCCAAACACATT +
Preference number: 4 (lower is better)
Translates to: SGVSVWGQGYGQKKDDKGLRLGQ*HNSKHI
Trigger: AATGTGTTTGGAATTGTGCCACTGTCCAAGCCTGAG...CCCTTTGTCATCTTTCTTCTGCCCATAACCCTGTCCCCACACACTTACCCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TTAGGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACTGGCTGGGTTCTGCTTaGTGTAATTCAGCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: LGLQSDKQTKTSTFHCAHWLGSA*CNSASQ
Trigger: CTGGCTGGCTGAATTACACCAAGCAGAACCCAGCCA...GTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACAAACACCATGTGGTCTaGGTAACCTTGGCGGTACAT +
Preference number: 4 (lower is better)
Translates to: GLQSDKQTKTSTFHCAHHKHHVV*VTLAVH
Trigger: ATGTACCGCCAAGGTTACCCAGACCACATGGTGTTT...GTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GAAGGGGCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCGCATTGTTCTTTAAGTaGTCCAGCATGATCTGGGCA +
Preference number: 4 (lower is better)
Translates to: EGAFYFLTSIRSTGRAQPALFFK*SSMIWA
Trigger: TGCCCAGATCATGCTGGACCACTTAAAGAACAATGC...GGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGCCCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TTAGGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACTCCGACTCTTCCAGCTaGTTCTTCAGCTGGGCAATC +
Preference number: 4 (lower is better)
Translates to: LGLQSDKQTKTSTFHCAHSDSSS*FFSWAI
Trigger: GATTGCCCAGCTGAAGAACCAGCTGGAAGAGTCGGA...GTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TTAGGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACAGTGGCTGGTTGGGCTaGAACTCTTCAAGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: LGLQSDKQTKTSTFHCAHSGWLG*NSSSCH
Trigger: ATGGCAGCTTGAAGAGTTCCAGCCCAACCAGCCACT...GTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AGCTTTATGGTAAGAAACCGAGAAGTAACAAGTAACAGACCACTTGTTGCTGTGGGTTGTGCGCCGCAGTaGGAAGCCAAAGTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: SFMVRNREVTSNRPLVAVGCAPQ*EAKVSC
Trigger: ACAGGAGACTTTGGCTTCTCACTGCGGCGCACAACC...CACAGCAACAAGTGGTCTGTTACTTGTTACTTCTCGGTTTCTTACCATAAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
CDS-3UTR TCA 90 bp TTAGGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACTACTGCACCAGATGCTaGAAGCTGGTAGTCTTGCCA +
Preference number: 4 (lower is better)
Translates to: LGLQSDKQTKTSTFHCAHYCTRC*KLVVLP
Trigger: TGGCAAGACTACCAGCTTTCAGCATCTGGTGCAGTA...GTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp GCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGTCTTCCAGCCGGTTTTaGATCTCGTTTTTCTCACGC +
Preference number: 4 (lower is better)
Translates to: AFYFLTSIRSTGRAQPNESSSRF*ISFFSR
Trigger: GCGTGAGAAAAACGAGATTCAAAACCGGCTGGAAGA...CTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACAGGCACCCCTTGAACATGTaGATCACCTTCTCTGAATAC +
Preference number: 4 (lower is better)
Translates to: LQSDKQTKTSTFHCAHHRHPLNM*ITFSEY
Trigger: GTATTCAGAGAAGGTGATGCACATGTTCAAGGGGTG...CCTGTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TTAGGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCAACATCGCCCTATATaGAGTCTGGGCTACAGCGTA +
Preference number: 4 (lower is better)
Translates to: LGLQSDKQTKTSTFHCAHQHRPI*SLGYSV
Trigger: TACGCTGTAGCCCAGACTGCATATAGGGCGATGTTG...GTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACAAACACATTGTTCTCTaGCAAGTGGTTCAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: GLQSDKQTKTSTFHCAHHKHIVL*QVVQVE
Trigger: CTCCACCTGAACCACTTGGCAGAGAACAATGTGTTT...GTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TCTGGGGTAAGTGTGTGGGGACAGGGTTATGGGCAGAAGAAAGATGACAAAGGGATGAGGGCATCTACTTaGAGCTTAATCTGTATGCAC +
Preference number: 4 (lower is better)
Translates to: SGVSVWGQGYGQKKDDKGMRAST*SLICMH
Trigger: GTGCATACAGATTAAGCTGCAAGTAGATGCCCTCAT...CCCTTTGTCATCTTTCTTCTGCCCATAACCCTGTCCCCACACACTTACCCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TTAGGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACTCCTCAATGGCAGCTTaGAAGTCCCCAATGCGTTTG +
Preference number: 4 (lower is better)
Translates to: LGLQSDKQTKTSTFHCAHSSMAA*KSPMRL
Trigger: CAAACGCATTGGGGACTTGCAAGCTGCCATTGAGGA...GTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp TTAGGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACGCCATCGTCAGAAGGTaGCTTAGAAGGTCCCTTGTT +
Preference number: 4 (lower is better)
Translates to: LGLQSDKQTKTSTFHCAHAIVRR*LRRSLV
Trigger: AACAAGGGACCTTCTAAGGCACCTTCTGACGATGGC...GTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGCTTTATGGTAAGAAACCGAGAAGTAACAAGTAACAGACCACTTGTTGCTGTGAGTGAGCGAACCAGGTaGGAAGCCTGGTCCACAGCA +
Preference number: 4 (lower is better)
Translates to: SFMVRNREVTSNRPLVAVSERTR*EAWSTA
Trigger: TGCTGTGGACCAGGCTTCCCACCTGGTTCGCTCACT...CACAGCAACAAGTGGTCTGTTACTTGTTACTTCTCGGTTTCTTACCATAAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp CTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGTACAAAGCAATGAAACACCATGTGGTCTaGGTAACCTTGGCGGTACAT +
Preference number: 4 (lower is better)
Translates to: LTSIRSTGRAQPNEYKAMKHHVV*VTLAVH
Trigger: ATGTACCGCCAAGGTTACCCAGACCACATGGTGTTT...CATTGCTTTGTACTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGCTTTATGGTAAGAAACCGAGAAGTAACAAGTAACAGACCACTTGTTGCTGTGTTCTTCTCCAGCTCGTaGTTTCGGACCTGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: SFMVRNREVTSNRPLVAVFFSSS*FRTCWP
Trigger: GGGCCAGCAGGTCCGAAACCACGAGCTGGAGAAGAA...CACAGCAACAAGTGGTCTGTTACTTGTTACTTCTCGGTTTCTTACCATAAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGTCCATCTCCTTGGAATaGGTCTGTCTCATTCTCTCC +
Preference number: 4 (lower is better)
Translates to: AFYFLTSIRSTGRAQPNESISLE*VCLILS
Trigger: GGAGAGAATGAGACAGACCCATTCCAAGGAGATGGA...CTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp GCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGGACTCTCCATCTCCTTaGAATGGGTCTGTCTCATTC +
Preference number: 4 (lower is better)
Translates to: AFYFLTSIRSTGRAQPNEDSPSP*NGSVSF
Trigger: GAATGAGACAGACCCATTCCAAGGAGATGGAGAGTC...CTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TTAGGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACGCGCTGTCTTGGCTTTaGCGATGTCATCAATCTGCA +
Preference number: 4 (lower is better)
Translates to: LGLQSDKQTKTSTFHCAHALSWL*RCHQSA
Trigger: TGCAGATTGATGACATCGCCAAAGCCAAGACAGCGC...GTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AGCTTTATGGTAAGAAACCGAGAAGTAACAAGTAACAGACCACTTGTTGCTGTGGTGCATCACCTTCTCTaGATACACAGCAGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: SFMVRNREVTSNRPLVAVVHHLL*IHSRSP
Trigger: GGGGCTCCTGCTGTGTATTCAGAGAAGGTGATGCAC...CACAGCAACAAGTGGTCTGTTACTTGTTACTTCTCGGTTTCTTACCATAAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AGCTTTATGGTAAGAAACCGAGAAGTAACAAGTAACAGACCACTTGTTGCTGTGTGGCACTGCCATTCATaGTGGTGGGGCTGTTCCCAA +
Preference number: 4 (lower is better)
Translates to: SFMVRNREVTSNRPLVAVWHCHS*WWGCSQ
Trigger: TTGGGAACAGCCCCACCATCATGAATGGCAGTGCCA...CACAGCAACAAGTGGTCTGTTACTTGTTACTTCTCGGTTTCTTACCATAAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGCTTTATGGTAAGAAACCGAGAAGTAACAAGTAACAGACCACTTGTTGCTGTGCACTGGAGCTGGCTGTaGTTAGGTGTCCTGAGTCCA +
Preference number: 4 (lower is better)
Translates to: SFMVRNREVTSNRPLVAVHWSWL*LGVLSP
Trigger: TGGACTCAGGACACCTAAGCACAGCCAGCTCCAGTG...CACAGCAACAAGTGGTCTGTTACTTGTTACTTCTCGGTTTCTTACCATAAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
CDS-3UTR GCA 90 bp CTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGTACAAAGCAATGAAGCAGTGCACGAAATaGATCTTGGACCTCTTGATG +
Preference number: 4 (lower is better)
Translates to: LTSIRSTGRAQPNEYKAMKQCTK*ILDLLM
Trigger: CATCAAGAGGTCCAAGATGCATTTCGTGCACTGCTT...CATTGCTTTGTACTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGCTTTATGGTAAGAAACCGAGAAGTAACAAGTAACAGACCACTTGTTGCTGTGTGGAACAGGGTCAGGTaGCTGCTGGTTTGCTCGTCT +
Preference number: 4 (lower is better)
Translates to: SFMVRNREVTSNRPLVAVWNRVR*LLVCSS
Trigger: AGACGAGCAAACCAGCAGGCACCTGACCCTGTTCCA...CACAGCAACAAGTGGTCTGTTACTTGTTACTTCTCGGTTTCTTACCATAAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGCTTTATGGTAAGAAACCGAGAAGTAACAAGTAACAGACCACTTGTTGCTGTGCTGTCGAACCTCCTCTaGTTCTTCTCCAGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: SFMVRNREVTSNRPLVAVLSNLL*FFSSSW
Trigger: CCACGAGCTGGAGAAGAAGCAGAGGAGGTTCGACAG...CACAGCAACAAGTGGTCTGTTACTTGTTACTTCTCGGTTTCTTACCATAAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGTACAAAGCAATGTTTGTCACCATGTCCTaGAAACTGTTGATGAGGTCC +
Preference number: 4 (lower is better)
Translates to: LTSIRSTGRAQPNEYKAMFVTMS*KLLMRS
Trigger: GGACCTCATCAACAGTTTGCAGGACATGGTGACAAA...CATTGCTTTGTACTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000108375.9
CDS-3UTR CCA 90 bp AGCTTTATGGTAAGAAACCGAGAAGTAACAAGTAACAGACCACTTGTTGCTGTGCATCCACATCCAGGATaGCTCCGTCATGGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: SFMVRNREVTSNRPLVAVHPHPG*LRHGPA
Trigger: AGCTGGACCATGACGGAGCCATCCTGGATGTGGATG...CACAGCAACAAGTGGTCTGTTACTTGTTACTTCTCGGTTTCTTACCATAAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TTAGGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACGTGCCTCCTTTTAGCTaGTGTTTGAAGATAGCCGAG +
Preference number: 4 (lower is better)
Translates to: LGLQSDKQTKTSTFHCAHVPPFS*CLKIAE
Trigger: CTCGGCTATCTTCAAACACCAGCTAAAAGGAGGCAC...GTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGCTTTATGGTAAGAAACCGAGAAGTAACAAGTAACAGACCACTTGTTGCTGTGGAACAGAGTGAGTGCTaGCTGGACTTGAGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: SFMVRNREVTSNRPLVAVEQSEC*LDLRAL
Trigger: CAGGGCTCTCAAGTCCAGCCAGCACTCACTCTGTTC...CACAGCAACAAGTGGTCTGTTACTTGTTACTTCTCGGTTTCTTACCATAAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGCTTTATGGTAAGAAACCGAGAAGTAACAAGTAACAGACCACTTGTTGCTGTGTATCTCTCCAACTCCTaGAGGAAGGTGCGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: SFMVRNREVTSNRPLVAVYLSNS*RKVRSW
Trigger: CCACGAGCGCACCTTCCTCCAGGAGTTGGAGAGATA...CACAGCAACAAGTGGTCTGTTACTTGTTACTTCTCGGTTTCTTACCATAAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGCTTTATGGTAAGAAACCGAGAAGTAACAAGTAACAGACCACTTGTTGCTGTGTCGGCTTGCAGGCTTTaGTTAGCAGCTTCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: SFMVRNREVTSNRPLVAVSACRL*LAASRL
Trigger: GAGCCTGGAAGCTGCTAACCAAAGCCTGCAAGCCGA...CACAGCAACAAGTGGTCTGTTACTTGTTACTTCTCGGTTTCTTACCATAAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGCTTTATGGTAAGAAACCGAGAAGTAACAAGTAACAGACCACTTGTTGCTGTGTGGTCTCTGTCAGCTTaGCCTCTGTGTCGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: SFMVRNREVTSNRPLVAVWSLSA*PLCRCH
Trigger: GTGACAGCGACACAGAGGCCAAGCTGACAGAGACCA...CACAGCAACAAGTGGTCTGTTACTTGTTACTTCTCGGTTTCTTACCATAAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGCTTTATGGTAAGAAACCGAGAAGTAACAAGTAACAGACCACTTGTTGCTGTGTGGGTTCGGGACTCTTaGCTGTCTGGGAAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: SFMVRNREVTSNRPLVAVWVRDS*LSGKSL
Trigger: CAGAGACTTCCCAGACAGCCAAGAGTCCCGAACCCA...CACAGCAACAAGTGGTCTGTTACTTGTTACTTCTCGGTTTCTTACCATAAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000167856.8
CDS-3UTR TCA 90 bp AGCTTTATGGTAAGAAACCGAGAAGTAACAAGTAACAGACCACTTGTTGCTGTGTTTGCTGCTTCAAGCTaGAAGCCTCAGCCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: SFMVRNREVTSNRPLVAVFAASS*KPQPGA
Trigger: TGCTCCTGGCTGAGGCTTTCAGCTTGAAGCAGCAAA...CACAGCAACAAGTGGTCTGTTACTTGTTACTTCTCGGTTTCTTACCATAAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR TCA 90 bp AGCTTTATGGTAAGAAACCGAGAAGTAACAAGTAACAGACCACTTGTTGCTGTGTCTCCATGGTTTCTTTaGGCCGACTGGCCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: SFMVRNREVTSNRPLVAVSPWFL*ADWPGS
Trigger: AGAACCTGGCCAGTCGGCTCAAAGAAACCATGGAGA...CACAGCAACAAGTGGTCTGTTACTTGTTACTTCTCGGTTTCTTACCATAAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp CTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGTACAAAGCAATGATGAGGGCATCTACTTaGAGCTTAATCTGTATGCAC +
Preference number: 4 (lower is better)
Translates to: LTSIRSTGRAQPNEYKAMMRAST*SLICMH
Trigger: GTGCATACAGATTAAGCTGCAAGTAGATGCCCTCAT...CATTGCTTTGTACTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGCTTTATGGTAAGAAACCGAGAAGTAACAAGTAACAGACCACTTGTTGCTGTGAGACGCAGCTTGGCCTaGTCCAGCATCTGTATACTC +
Preference number: 4 (lower is better)
Translates to: SFMVRNREVTSNRPLVAVRRSLA*SSICIL
Trigger: GAGTATACAGATGCTGGAGCAGGCCAAGCTGCGTCT...CACAGCAACAAGTGGTCTGTTACTTGTTACTTCTCGGTTTCTTACCATAAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp TTAGGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACGCATTGTTCTTTAAGTaGTCCAGCATGATCTGGGCA +
Preference number: 4 (lower is better)
Translates to: LGLQSDKQTKTSTFHCAHALFFK*SSMIWA
Trigger: TGCCCAGATCATGCTGGACCACTTAAAGAACAATGC...GTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGCTTTATGGTAAGAAACCGAGAAGTAACAAGTAACAGACCACTTGTTGCTGTGCCTCCAGCGCTGTCTTaGCTTTGGCGATGTCATCAA +
Preference number: 4 (lower is better)
Translates to: SFMVRNREVTSNRPLVAVPPALS*LWRCHQ
Trigger: TTGATGACATCGCCAAAGCCAAGACAGCGCTGGAGG...CACAGCAACAAGTGGTCTGTTACTTGTTACTTCTCGGTTTCTTACCATAAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGCTTTATGGTAAGAAACCGAGAAGTAACAAGTAACAGACCACTTGTTGCTGTGTGCCTTTACAGCTGCTaGACAGGTGAATTCCGACTC +
Preference number: 4 (lower is better)
Translates to: SFMVRNREVTSNRPLVAVCLYSC*TGEFRL
Trigger: GAGTCGGAATTCACCTGTGCAGCAGCTGTAAAGGCA...CACAGCAACAAGTGGTCTGTTACTTGTTACTTCTCGGTTTCTTACCATAAAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGCTTTATGGTAAGAAACCGAGAAGTAACAAGTAACAGACCACTTGTTGCTGTGTCATCAATCTGCAGGTaGAGGTCTTCCATCTCCACC +
Preference number: 4 (lower is better)
Translates to: SFMVRNREVTSNRPLVAVSSICR*RSSIST
Trigger: GGTGGAGATGGAAGACCTGCACCTGCAGATTGATGA...CACAGCAACAAGTGGTCTGTTACTTGTTACTTCTCGGTTTCTTACCATAAAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp GCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGTCCATCTGTTTTAACTaGTCCAGCATCTGTATACTC +
Preference number: 4 (lower is better)
Translates to: AFYFLTSIRSTGRAQPNESICFN*SSICIL
Trigger: GAGTATACAGATGCTGGAGCAGTTAAAACAGATGGA...CTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000108376.9
CDS-3UTR CCA 90 bp AGCTTTATGGTAAGAAACCGAGAAGTAACAAGTAACAGACCACTTGTTGCTGTGCTGATGATCTTTTTCTaGGAGTCCTGCAGAAGCCGG +
Preference number: 4 (lower is better)
Translates to: SFMVRNREVTSNRPLVAVLMIFF*ESCRSR
Trigger: CCGGCTTCTGCAGGACTCCCAGAAAAAGATCATCAG...CACAGCAACAAGTGGTCTGTTACTTGTTACTTCTCGGTTTCTTACCATAAAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGCTTTATGGTAAGAAACCGAGAAGTAACAAGTAACAGACCACTTGTTGCTGTGGACTCTCCATCTCCTTaGAATGGGTCTGTCTCATTC +
Preference number: 4 (lower is better)
Translates to: SFMVRNREVTSNRPLVAVDSPSP*NGSVSF
Trigger: GAATGAGACAGACCCATTCCAAGGAGATGGAGAGTC...CACAGCAACAAGTGGTCTGTTACTTGTTACTTCTCGGTTTCTTACCATAAAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGCTTTATGGTAAGAAACCGAGAAGTAACAAGTAACAGACCACTTGTTGCTGTGTACTCCTCCTCGAGCTaGACTTCCATCTGTTTTAAC +
Preference number: 4 (lower is better)
Translates to: SFMVRNREVTSNRPLVAVYSSSS*TSICFN
Trigger: GTTAAAACAGATGGAAGTGCAGCTCGAGGAGGAGTA...CACAGCAACAAGTGGTCTGTTACTTGTTACTTCTCGGTTTCTTACCATAAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CCA 90 bp AGCTTTATGGTAAGAAACCGAGAAGTAACAAGTAACAGACCACTTGTTGCTGTGCTTGCTTCTCCTTGTTaGACTCTTCAATCTGAGCCT +
Preference number: 4 (lower is better)
Translates to: SFMVRNREVTSNRPLVAVLASPC*TLQSEP
Trigger: AGGCTCAGATTGAAGAGTCCAACAAGGAGAAGCAAG...CACAGCAACAAGTGGTCTGTTACTTGTTACTTCTCGGTTTCTTACCATAAAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR GCA 90 bp AGCTTTATGGTAAGAAACCGAGAAGTAACAAGTAACAGACCACTTGTTGCTGTGTTTTCCTCCATTTGCTaGTTCAAGCTGAAAGCCTCA +
Preference number: 4 (lower is better)
Translates to: SFMVRNREVTSNRPLVAVFSSIC*FKLKAS
Trigger: TGAGGCTTTCAGCTTGAAGCAGCAAATGGAGGAAAA...CACAGCAACAAGTGGTCTGTTACTTGTTACTTCTCGGTTTCTTACCATAAAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS GCA 90 bp TGTAGGCAGGAGAGGCGGCCTCGGGGTCCAGATCAGCCGGCTCCCTaGGGTGTCCCTCGCCAGTCCGAAGCCAGCTCCGGCTCAGCTCGC +
Preference number: 5 (lower is better)
Translates to: CRQERRPRGPDQPAP*GVPRQSEASSGSAR
Trigger: GCGAGCTGAGCCGGAGCTGGCTTCGGACTGGCGAGGGACACCGCAGGGAGCCGGCTGATCTGGACCCCGAGGCCGCCTCTCCTGCCTACA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000130627.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS GCA 90 bp GGCCACTGCGGGAAGAGACATCTGCGGCAGAGGCAGAGCGGCGGATaGTGCTGCCCCTCTCTGGGTGCTCCAGCTGTGCGCTCCGGGCAC +
Preference number: 5 (lower is better)
Translates to: GHCGKRHLRQRQSGG*CCPSLGAPAVRSGH
Trigger: GTGCCCGGAGCGCACAGCTGGAGCACCCAGAGAGGGGCAGCAGCATCCGCCGCTCTGCCTCTGCCGCAGATGTCTCTTCCCGCAGTGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS-3UTR CAA 90 bp CGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCCTCTCCTCTGGCCCCTaGCCCTCCTTAGGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: RPPLPRGAVRRPQPGKSPLSSGP*PSLGRL
Trigger: CAGCCTCCCTAAGGAGGGCAAGGGGCCAGAGGAGAG...GGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCG
69% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS GCA 90 bp CACTGCGGGAAGAGACATCTGCGGCAGAGGCAGAGCGGCGGATGCTaGTGCCCCTCTCTGGGTGCTCCAGCTGTGCGCTCCGGGCACTCT +
Preference number: 5 (lower is better)
Translates to: HCGKRHLRQRQSGGC*CPSLGAPAVRSGHS
Trigger: AGAGTGCCCGGAGCGCACAGCTGGAGCACCCAGAGAGGGGCAGCAGCATCCGCCGCTCTGCCTCTGCCGCAGATGTCTCTTCCCGCAGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS CCA 90 bp GACATCTGCGGCAGAGGCAGAGCGGCGGATGCTGCTGCCCCTCTCTaGGTGCTCCAGCTGTGCGCTCCGGGCACTCTGGATGCTCTTCCG +
Preference number: 5 (lower is better)
Translates to: DICGRGRAADAAAPL*VLQLCAPGTLDALP
Trigger: CGGAAGAGCATCCAGAGTGCCCGGAGCGCACAGCTGGAGCACCCAGAGAGGGGCAGCAGCATCCGCCGCTCTGCCTCTGCCGCAGATGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS-3UTR CAA 90 bp CGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTCCTGGTCCTTGACCTaGGCCTCCAAGTCCCGGAGC +
Preference number: 5 (lower is better)
Translates to: RPPLPRGAVRRPQPGKSPSWSLT*ASKSRS
Trigger: GCTCCGGGACTTGGAGGCCAAGGTCAAGGACCAGGA...GGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CCA 90 bp CTCCATCATCCCACTCATCCAGGCAGCTCTGGCCGAGGGATAGCCTaGAGTCAGGGCTCTCCCGACCCAGGCCTGAGGCCCGGTTCCAGG +
Preference number: 5 (lower is better)
Translates to: LHHPTHPGSSGRGIA*SQGSPDPGLRPGSR
Trigger: CCTGGAACCGGGCCTCAGGCCTGGGTCGGGAGAGCCCTGACTCCAGGCTATCCCTCGGCCAGAGCTGCCTGGATGAGTGGGATGATGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS CCA 90 bp CTGAGGGCCACGCTGGCTCCATCATCCCACTCATCCAGGCAGCTCTaGCCGAGGGATAGCCTGGAGTCAGGGCTCTCCCGACCCAGGCCT +
Preference number: 5 (lower is better)
Translates to: LRATLAPSSHSSRQL*PRDSLESGLSRPRP
Trigger: AGGCCTGGGTCGGGAGAGCCCTGACTCCAGGCTATCCCTCGGCCAGAGCTGCCTGGATGAGTGGGATGATGGAGCCAGCGTGGCCCTCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS-3UTR CAA 90 bp CGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTTGTACTCCACCCAGTaGGTACCGTGGCTGTGGCCC +
Preference number: 5 (lower is better)
Translates to: RPPLPRGAVRRPQPGKSPLYSTQ*VPWLWP
Trigger: GGGCCACAGCCACGGTACCAACTGGGTGGAGTACAA...GGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTCCCCACCCTGCCTCCAAAGAACCAGGGCCCCGGCTCTGCTAACCGCTGTCCCCCCTCCAGGTGCAGCTaGGTGTCCTGCAGCTCAGCT +
Preference number: 5 (lower is better)
Translates to: LPTLPPKNQGPGSANRCPPSRCS*VSCSSA
Trigger: AGCTGAGCTGCAGGACACCAAGCTGCACCTGGAGGG...GGGACAGCGGTTAGCAGAGCCGGGGCCCTGGTTCTTTGGAGGCAGGGTGGGGAG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGCCCTCCAGGTGCAGCTaGGTGTCCTGCAGCTCAGCT +
Preference number: 5 (lower is better)
Translates to: PTSAAWSCQTPTAWKVPLPSRCS*VSCSSA
Trigger: AGCTGAGCTGCAGGACACCAAGCTGCACCTGGAGGG...CAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTCCCGGAGCTGCTTCTaGACCTTGGCCAGAGAAGCC +
Preference number: 5 (lower is better)
Translates to: RPPLPRGAVRRPQPGKSPSRSCF*TLAREA
Trigger: GGCTTCTCTGGCCAAGGTCAAGAAGCAGCTCCGGGA...GGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCCTGCTGACGAGGGACTaGTCCACCATGGACTGCTCC +
Preference number: 5 (lower is better)
Translates to: RPPLPRGAVRRPQPGKSPLLTRD*STMDCS
Trigger: GGAGCAGTCCATGGTGGACAAGTCCCTCGTCAGCAG...GGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CCA 90 bp TCCCTCGCCAGTCCGAAGCCAGCTCCGGCTCAGCTCGCTAAGCTCTaGGATGGGCTGTACCTTGAGCCGCACACTGTCCCCAGACTGCCG +
Preference number: 5 (lower is better)
Translates to: SLASPKPAPAQLAKL*DGLYLEPHTVPRLP
Trigger: CGGCAGTCTGGGGACAGTGTGCGGCTCAAGGTACAGCCCATCCCAGAGCTTAGCGAGCTGAGCCGGAGCTGGCTTCGGACTGGCGAGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130627.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CAA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCCCGATCCAGCATGGTaGTGCGCCGCAGTGAGAAGC +
Preference number: 5 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSPDPAW*CAAVRS
Trigger: GCTTCTCACTGCGGCGCACAACCATGCTGGATCGGG...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CAA 90 bp GCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCGATCCAGCATGGTaGTGCGCCGCAGTGAGAAGC +
Preference number: 5 (lower is better)
Translates to: ASPTSAAWSCQTPTAWKVPDPAW*CAAVRS
Trigger: GCTTCTCACTGCGGCGCACAACCATGCTGGATCGGG...GACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CAA 90 bp CTCCCCACCCTGCCTCCAAAGAACCAGGGCCCCGGCTCTGCTAACCGCTGTCCCAGCCACCTGGCCAGCTaGGTCAAAGTCCAGGGAGAG +
Preference number: 5 (lower is better)
Translates to: LPTLPPKNQGPGSANRCPSHLAS*VKVQGE
Trigger: CTCTCCCTGGACTTTGACCAAGCTGGCCAGGTGGCT...GGGACAGCGGTTAGCAGAGCCGGGGCCCTGGTTCTTTGGAGGCAGGGTGGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCGAGTGCTGGCTGGACTaGAGAGCCCTGTTTACCAGG +
Preference number: 5 (lower is better)
Translates to: RPPLPRGAVRRPQPGKSPECWLD*RALFTR
Trigger: CCTGGTAAACAGGGCTCTCAAGTCCAGCCAGCACTC...GGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGTTGTACTCCACCCAGTaGGTACCGTGGCTGTGGCCC +
Preference number: 5 (lower is better)
Translates to: PTSAAWSCQTPTAWKVPLLYSTQ*VPWLWP
Trigger: GGGCCACAGCCACGGTACCAACTGGGTGGAGTACAA...CAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCAGCCAGCCAGCCACGTaGTACTCCACCCAGTTGGTA +
Preference number: 5 (lower is better)
Translates to: RPPLPRGAVRRPQPGKSPSQPAT*YSTQLV
Trigger: TACCAACTGGGTGGAGTACAACGTGGCTGGCTGGCT...GGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGTCCCGGAGCTGCTTCTaGACCTTGGCCAGAGAAGCC +
Preference number: 5 (lower is better)
Translates to: PTSAAWSCQTPTAWKVPLSRSCF*TLAREA
Trigger: GGCTTCTCTGGCCAAGGTCAAGAAGCAGCTCCGGGA...CAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTCGCTCATCTCCTCCTaGGTGTCACGAAGCTGTCGC +
Preference number: 5 (lower is better)
Translates to: RPPLPRGAVRRPQPGKSPSLISS*VSRSCR
Trigger: GCGACAGCTTCGTGACACCAAGGAGGAGATGAGCGA...GGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS TCA 90 bp GCACTCAGTTTGGTGCCCTCTCCCAGGCCGCTCTCCTCAGGGCCCTaGCGGAAGGAGGTGGACCGTTGCAGGGTGCCTCCTTTTAGCTGG +
Preference number: 5 (lower is better)
Translates to: ALSLVPSPRPLSSGP*RKEVDRCRVPPFSW
Trigger: CCAGCTAAAAGGAGGCACCCTGCAACGGTCCACCTCCTTCCGTCAGGGCCCTGAGGAGAGCGGCCTGGGAGAGGGCACCAAACTGAGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS TCA 90 bp TCCTGGGCGGCCTTTCAGGAGAGGTGGCACGCTCACTCAGGGTGGTaGGGAGCGAGTCCTGGTCTCCAGTGCCCCCGATGGAGTCCTTCA +
Preference number: 5 (lower is better)
Translates to: SWAAFQERWHAHSGW*GASPGLQCPRWSPS
Trigger: TGAAGGACTCCATCGGGGGCACTGGAGACCAGGACTCGCTCCTCACCACCCTGAGTGAGCGTGCCACCTCTCCTGAAAGGCCGCCCAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS GCA 90 bp TGCCCCTCTCTGGGTGCTCCAGCTGTGCGCTCCGGGCACTCTGGATaGTCTTCCGGTCATCATCCTCAGAGTCAGGCTCCAGCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: CPSLGAPAVRSGHSG*SSGHHPQSQAPACS
Trigger: GGAGCAGGCTGGAGCCTGACTCTGAGGATGATGACCGGAAGAGCATCCAGAGTGCCCGGAGCGCACAGCTGGAGCACCCAGAGAGGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS GCA 90 bp CCTATGCTTGCTTCGGCTTTTGCGGCCACTGCGGGAAGAGACATCTaGGGCAGAGGCAGAGCGGCGGATGCTGCTGCCCCTCTCTGGGTG +
Preference number: 5 (lower is better)
Translates to: PMLASAFAATAGRDI*GRGRAADAAAPLWV
Trigger: CACCCAGAGAGGGGCAGCAGCATCCGCCGCTCTGCCTCTGCCGCAGATGTCTCTTCCCGCAGTGGCCGCAAAAGCCGAAGCAAGCATAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS GCA 90 bp TCTCCCCTTTCCCAGGAGGCTGCTTGCCGCGGGACTTGTGGTCCTTaGCTCGGCCCCGAGACATCAGACTGCGCAGGCCTACAGAGAGCT +
Preference number: 5 (lower is better)
Translates to: SPLSQEAACRGTCGP*LGPETSDCAGLQRA
Trigger: AGCTCTCTGTAGGCCTGCGCAGTCTGATGTCTCGGGGCCGAGGCAAGGACCACAAGTCCCGCGGCAAGCAGCCTCCTGGGAAAGGGGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151373.4
CDS CCA 90 bp GCCTCCTCTTCCAGGAGCCACAGTAGCCCTCTTGCCTCATCGGCATaGGCCAGTGAGCGAACCAGGTGGGAAGCCTGGTCCACAGCAGCC +
Preference number: 5 (lower is better)
Translates to: ASSSRSHSSPLASSA*ASERTRWEAWSTAA
Trigger: GGCTGCTGTGGACCAGGCTTCCCACCTGGTTCGCTCACTGGCCCATGCCGATGAGGCAAGAGGGCTACTGTGGCTCCTGGAAGAGGAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CCA 90 bp TCCTTCTCGGTCCGGAGCCTCTCGGCTGTCTCCGCGTCCAGCAGCTaGGAGGCGGACTCTCCCGTGTTGCGTTCATCAGTCAGCTCCGAT +
Preference number: 5 (lower is better)
Translates to: SFSVRSLSAVSASSS*EADSPVLRSSVSSD
Trigger: ATCGGAGCTGACTGATGAACGCAACACGGGAGAGTCCGCCTCCCAGCTGCTGGACGCGGAGACAGCCGAGAGGCTCCGGACCGAGAAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CCA 90 bp CTGCTGCCCCTCTCTGGGTGCTCCAGCTGTGCGCTCCGGGCACTCTaGATGCTCTTCCGGTCATCATCCTCAGAGTCAGGCTCCAGCCTG +
Preference number: 5 (lower is better)
Translates to: LLPLSGCSSCALRAL*MLFRSSSSESGSSL
Trigger: CAGGCTGGAGCCTGACTCTGAGGATGATGACCGGAAGAGCATCCAGAGTGCCCGGAGCGCACAGCTGGAGCACCCAGAGAGGGGCAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS-3UTR CAA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCGAGCCACTGGCCACCTaGATAGGGATGGGGTTGGAG +
Preference number: 5 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSEPLAT*IGMGLE
Trigger: CTCCAACCCCATCCCTATCAAGGTGGCCAGTGGCTC...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CAA 90 bp CGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCCTGCCTTCTTCACCCTaGAGGTCATCACTGGAGCTG +
Preference number: 5 (lower is better)
Translates to: RPPLPRGAVRRPQPGKSPLPSSP*RSSLEL
Trigger: CAGCTCCAGTGATGACCTCAAGGGTGAAGAAGGCAG...GGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CAA 90 bp TTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACGCCAGTGAACCGAACTaGGCTGCCCGCTGCAGCACA +
Preference number: 5 (lower is better)
Translates to: LERLCFAHLCRVELSDAHASEPN*AARCST
Trigger: TGTGCTGCAGCGGGCAGCCAAGTTCGGTTCACTGGC...GTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CAA 90 bp AGCAGGAGGCTGAGATGGAGGTCCACCACCGGCTCCATGGAATGCCAGGCCACCGCCAGTGAACCGAACTaGGCTGCCCGCTGCAGCACA +
Preference number: 5 (lower is better)
Translates to: SRRLRWRSTTGSMECQATASEPN*AARCST
Trigger: TGTGCTGCAGCGGGCAGCCAAGTTCGGTTCACTGGC...GGTGGCCTGGCATTCCATGGAGCCGGTGGTGGACCTCCATCTCAGCCTCCTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CAA 90 bp AGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGAGTGCTCTGAGGGGGTaGAGGTCTCCGAGGCACTCT +
Preference number: 5 (lower is better)
Translates to: RLCFAHLCRVELSDAHSLSALRG*RSPRHS
Trigger: AGAGTGCCTCGGAGACCTCAACCCCCTCAGAGCACT...CAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CAA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGACCCGATCCAGCATGGTaGTGCGCCGCAGTGAGAAGC +
Preference number: 5 (lower is better)
Translates to: LCRVELSDAHSLESPPDRPDPAW*CAAVRS
Trigger: GCTTCTCACTGCGGCGCACAACCATGCTGGATCGGG...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CAA 90 bp CACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGCCACCTGGCCAGCTaGGTCAAAGTCCAGGGAGAG +
Preference number: 5 (lower is better)
Translates to: HLCRVELSDAHSLESPPDSHLAS*VKVQGE
Trigger: CTCTCCCTGGACTTTGACCAAGCTGGCCAGGTGGCT...GTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGAGCCACCTGGCCAGCTaGGTCAAAGTCCAGGGAGAG +
Preference number: 5 (lower is better)
Translates to: RLCFAHLCRVELSDAHSLSHLAS*VKVQGE
Trigger: CTCTCCCTGGACTTTGACCAAGCTGGCCAGGTGGCT...CAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGAGCCAGCCAGCCACGTaGTACTCCACCCAGTTGGTA +
Preference number: 5 (lower is better)
Translates to: PTSAAWSCQTPTAWKVPLSQPAT*YSTQLV
Trigger: TACCAACTGGGTGGAGTACAACGTGGCTGGCTGGCT...CAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCGTGGTCTGGGTAACCTaGGCGGTACATGCGCATCGC +
Preference number: 5 (lower is better)
Translates to: ASPTSAAWSCQTPTAWKVVVWVT*AVHAHR
Trigger: GCGATGCGCATGTACCGCCAAGGTTACCCAGACCAC...GACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACGTGGTCTGGGTAACCTaGGCGGTACATGCGCATCGC +
Preference number: 5 (lower is better)
Translates to: HLCRVELSDAHSLESPPDVVWVT*AVHAHR
Trigger: GCGATGCGCATGTACCGCCAAGGTTACCCAGACCAC...GTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGTGGTCTGGGTAACCTaGGCGGTACATGCGCATCGC +
Preference number: 5 (lower is better)
Translates to: RLCFAHLCRVELSDAHSLVVWVT*AVHAHR
Trigger: GCGATGCGCATGTACCGCCAAGGTTACCCAGACCAC...CAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGTCCACCTTCTCAAGCTaGCTGCGCAGCTGCTGGATC +
Preference number: 5 (lower is better)
Translates to: PTSAAWSCQTPTAWKVPLSTFSS*LRSCWI
Trigger: GATCCAGCAGCTGCGCAGCAAGCTTGAGAAGGTGGA...CAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCGCGGACTCTCCCGTGTaGCGTTCATCAGTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSADSPV*RSSVSS
Trigger: GGAGCTGACTGATGAACGCAACACGGGAGAGTCCGC...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCTGCTGGAGCCGCTTCTaGGTGAAGTCCACCTCCCGA +
Preference number: 5 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSCWSRF*VKSTSR
Trigger: TCGGGAGGTGGACTTCACCAAGAAGCGGCTCCAGCA...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTCCCCACCCTGCCTCCAAAGAACCAGGGCCCCGGCTCTGCTAACCGCTGTCCCCTCATCACTATCTGCTaGCAGGTCCCCAAGCCGCCT +
Preference number: 5 (lower is better)
Translates to: LPTLPPKNQGPGSANRCPLITIC*QVPKPP
Trigger: AGGCGGCTTGGGGACCTGCAAGCAGATAGTGATGAG...GGGACAGCGGTTAGCAGAGCCGGGGCCCTGGTTCTTTGGAGGCAGGGTGGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCCTGCTGCAGTGCCCGTaGACTCTCATCACTATCTGC +
Preference number: 5 (lower is better)
Translates to: RPPLPRGAVRRPQPGKSPLLQCP*TLITIC
Trigger: GCAGATAGTGATGAGAGTCAACGGGCACTGCAGCAG...GGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACCCCTCCAGGTGCAGCTaGGTGTCCTGCAGCTCAGCT +
Preference number: 5 (lower is better)
Translates to: LERLCFAHLCRVELSDAHPSRCS*VSCSSA
Trigger: AGCTGAGCTGCAGGACACCAAGCTGCACCTGGAGGG...GTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGACCCTCCAGGTGCAGCTaGGTGTCCTGCAGCTCAGCT +
Preference number: 5 (lower is better)
Translates to: LCRVELSDAHSLESPPDRPSRCS*VSCSSA
Trigger: AGCTGAGCTGCAGGACACCAAGCTGCACCTGGAGGG...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGTCCCGGAGCTGCTTCTaGACCTTGGCCAGAGAAGCC +
Preference number: 5 (lower is better)
Translates to: RLCFAHLCRVELSDAHSLSRSCF*TLAREA
Trigger: GGCTTCTCTGGCCAAGGTCAAGAAGCAGCTCCGGGA...CAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTTCCTGGTCCTTGACCTaGGCCTCCAAGTCCCGGAGC +
Preference number: 5 (lower is better)
Translates to: CFAHLCRVELSDAHSLESSWSLT*ASKSRS
Trigger: GCTCCGGGACTTGGAGGCCAAGGTCAAGGACCAGGA...ACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGATCCTGGTCCTTGACCTaGGCCTCCAAGTCCCGGAGC +
Preference number: 5 (lower is better)
Translates to: LCRVELSDAHSLESPPDRSWSLT*ASKSRS
Trigger: GCTCCGGGACTTGGAGGCCAAGGTCAAGGACCAGGA...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGTCCTCTTCCTGGTCCTaGACCTTGGCCTCCAAGTCC +
Preference number: 5 (lower is better)
Translates to: PTSAAWSCQTPTAWKVPLSSSWS*TLASKS
Trigger: GGACTTGGAGGCCAAGGTCAAGGACCAGGAAGAGGA...CAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGATCTCCAGACGCAGCTaGGCCTGCTCCAGCATCTGT +
Preference number: 5 (lower is better)
Translates to: PTSAAWSCQTPTAWKVPLISRRS*ACSSIC
Trigger: ACAGATGCTGGAGCAGGCCAAGCTGCGTCTGGAGAT...CAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGAGCGTGGAGAGCTaGCTCTCCAGCTCCCGTTTC +
Preference number: 5 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSLSVES*LSSSRF
Trigger: GAAACGGGAGCTGGAGAGCAAGCTCTCCACGCTCAG...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGCTGAGCGTGGAGAGCTaGCTCTCCAGCTCCCGTTTC +
Preference number: 5 (lower is better)
Translates to: RLCFAHLCRVELSDAHSLLSVES*LSSSRF
Trigger: GAAACGGGAGCTGGAGAGCAAGCTCTCCACGCTCAG...CAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGGGCCACAGCTGCCTaGTGCTTCTTCATCAGCTCA +
Preference number: 5 (lower is better)
Translates to: RPPLPRGAVRRPQPGKSPWATAA*CFFISS
Trigger: TGAGCTGATGAAGAAGCACAAGGCAGCTGTGGCCCA...GGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTCCCCACCCTGCCTCCAAAGAACCAGGGCCCCGGCTCTGCTAACCGCTGTCCCTCGCTCATCTCCTCCTaGGTGTCACGAAGCTGTCGC +
Preference number: 5 (lower is better)
Translates to: LPTLPPKNQGPGSANRCPSLISS*VSRSCR
Trigger: GCGACAGCTTCGTGACACCAAGGAGGAGATGAGCGA...GGGACAGCGGTTAGCAGAGCCGGGGCCCTGGTTCTTTGGAGGCAGGGTGGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGTTTGACAACCAGGACTaGACCCCGTCGACCCGGTCC +
Preference number: 5 (lower is better)
Translates to: RLCFAHLCRVELSDAHSLFDNQD*TPSTRS
Trigger: GGACCGGGTCGACGGGGTCAAGTCCTGGTTGTCAAA...CAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACTTTGACAACCAGGACTaGACCCCGTCGACCCGGTCC +
Preference number: 5 (lower is better)
Translates to: HLCRVELSDAHSLESPPDFDNQD*TPSTRS
Trigger: GGACCGGGTCGACGGGGTCAAGTCCTGGTTGTCAAA...GTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCGCTTCAGCAGCTTCTTaGGTAGCTCCAGCAGCCCCC +
Preference number: 5 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSASAAS*VAPAAP
Trigger: GGGGGCTGCTGGAGCTACCAAAGAAGCTGCTGAAGC...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CAA 90 bp ACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACACTTGGGCCTCTTCATTaGGGCCCTCGGCTGAGGCAG +
Preference number: 5 (lower is better)
Translates to: TSAAWSCQTPTAWKVPLTLGPLH*GPRLRQ
Trigger: CTGCCTCAGCCGAGGGCCCAAATGAAGAGGCCCAAG...TGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000167856.8
CDS TCA 90 bp GAGGCTCCTTGGCAGTCCCAGGCTCCTCACCAGGCAGTACTTTGCTaGCCACCTTCCTCACTGCATTCGCCACCCGCTTCCGGGACAGGC +
Preference number: 5 (lower is better)
Translates to: EAPWQSQAPHQAVLC*PPSSLHSPPASGTG
Trigger: GCCTGTCCCGGAAGCGGGTGGCGAATGCAGTGAGGAAGGTGGTCAGCAAAGTACTGCCTGGTGAGGAGCCTGGGACTGCCAAGGAGCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151373.4
CDS GCA 90 bp GGGCAAGGTAGCCCCGGCAGGCTGCCTGGAACAGGGTCAGGTGCCTaGTGGTTTGCTCGTCTCGTTGTTCTTCCAACCGTGCCAACGTGC +
Preference number: 5 (lower is better)
Translates to: GQGSPGRLPGTGSGA*WFARLVVLPTVPTC
Trigger: GCACGTTGGCACGGTTGGAAGAACAACGAGACGAGCAAACCAGCAGGCACCTGACCCTGTTCCAGGCAGCCTGCCGGGGCTACCTTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS GCA 90 bp GGCTGCTCCGTTTGCTCCTATGCTTGCTTCGGCTTTTGCGGCCACTaGGGGAAGAGACATCTGCGGCAGAGGCAGAGCGGCGGATGCTGC +
Preference number: 5 (lower is better)
Translates to: GCSVCSYACFGFCGH*GKRHLRQRQSGGCC
Trigger: GCAGCATCCGCCGCTCTGCCTCTGCCGCAGATGTCTCTTCCCGCAGTGGCCGCAAAAGCCGAAGCAAGCATAGGAGCAAACGGAGCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS CCA 90 bp GTGGTGAAGGTTTTCCTCATGCTGGTTGCCCGGCGCAAGGCCAGCTaGGAGCCACCTTCCAGGCCTGCAATCGAGCCTGAGAGCACCGTG +
Preference number: 5 (lower is better)
Translates to: VVKVFLMLVARRKAS*EPPSRPAIEPESTV
Trigger: CACGGTGCTCTCAGGCTCGATTGCAGGCCTGGAAGGTGGCTCCCAGCTGGCCTTGCGCCGGGCAACCAGCATGAGGAAAACCTTCACCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CCA 90 bp TCAGGAGAGGTGGCACGCTCACTCAGGGTGGTGAGGAGCGAGTCCTaGTCTCCAGTGCCCCCGATGGAGTCCTTCAGGGTGAGCCTCTTG +
Preference number: 5 (lower is better)
Translates to: SGEVARSLRVVRSES*SPVPPMESFRVSLL
Trigger: CAAGAGGCTCACCCTGAAGGACTCCATCGGGGGCACTGGAGACCAGGACTCGCTCCTCACCACCCTGAGTGAGCGTGCCACCTCTCCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS CCA 90 bp CTTCTTGCCTCTTGCTGGGTGCTCAGGGGACCTGGCTCCTCGGCCTaGAGGCTCCTTGGCAGTCCCAGGCTCCTCACCAGGCAGTACTTT +
Preference number: 5 (lower is better)
Translates to: LLASCWVLRGPGSSA*RLLGSPRLLTRQYF
Trigger: AAAGTACTGCCTGGTGAGGAGCCTGGGACTGCCAAGGAGCCTCCAGGCCGAGGAGCCAGGTCCCCTGAGCACCCAGCAAGAGGCAAGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151373.4
CDS-3UTR CAA 90 bp GCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCGAGCCACTGGCCACCTaGATAGGGATGGGGTTGGAG +
Preference number: 5 (lower is better)
Translates to: AAWSCQTPTAWKVPLTESEPLAT*IGMGLE
Trigger: CTCCAACCCCATCCCTATCAAGGTGGCCAGTGGCTC...GCTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CAA 90 bp AGCAGGAGGCTGAGATGGAGGTCCACCACCGGCTCCATGGAATGCCAGGCCACCGAGCCACTGGCCACCTaGATAGGGATGGGGTTGGAG +
Preference number: 5 (lower is better)
Translates to: SRRLRWRSTTGSMECQATEPLAT*IGMGLE
Trigger: CTCCAACCCCATCCCTATCAAGGTGGCCAGTGGCTC...GGTGGCCTGGCATTCCATGGAGCCGGTGGTGGACCTCCATCTCAGCCTCCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CAA 90 bp TCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCGCCAGTGAACCGAACTaGGCTGCCCGCTGCAGCACA +
Preference number: 5 (lower is better)
Translates to: SLERLCFAHLCRVELSDAASEPN*AARCST
Trigger: TGTGCTGCAGCGGGCAGCCAAGTTCGGTTCACTGGC...GGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CAA 90 bp TGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTAGTGCTCTGAGGGGGTaGAGGTCTCCGAGGCACTCT +
Preference number: 5 (lower is better)
Translates to: CFAHLCRVELSDAHSLESSALRG*RSPRHS
Trigger: AGAGTGCCTCGGAGACCTCAACCCCCTCAGAGCACT...ACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CAA 90 bp TCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAACCCGATCCAGCATGGTaGTGCGCCGCAGTGAGAAGC +
Preference number: 5 (lower is better)
Translates to: SAAWSCQTPTAWKVPLTEPDPAW*CAAVRS
Trigger: GCTTCTCACTGCGGCGCACAACCATGCTGGATCGGG...TTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CAA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCTCCCGCCGACACCCCTaGAACATGTGCATCACCTTC +
Preference number: 5 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSSRRHP*NMCITF
Trigger: GAAGGTGATGCACATGTTCAAGGGGTGTCGGCGGGA...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGCAGGAGGCTGAGATGGAGGTCCACCACCGGCTCCATGGAATGCCAGGCCACCAGCCACCTGGCCAGCTaGGTCAAAGTCCAGGGAGAG +
Preference number: 5 (lower is better)
Translates to: SRRLRWRSTTGSMECQATSHLAS*VKVQGE
Trigger: CTCTCCCTGGACTTTGACCAAGCTGGCCAGGTGGCT...GGTGGCCTGGCATTCCATGGAGCCGGTGGTGGACCTCCATCTCAGCCTCCTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTTTGTACTCCACCCAGTaGGTACCGTGGCTGTGGCCC +
Preference number: 5 (lower is better)
Translates to: CFAHLCRVELSDAHSLESLYSTQ*VPWLWP
Trigger: GGGCCACAGCCACGGTACCAACTGGGTGGAGTACAA...ACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTGTGGTCTGGGTAACCTaGGCGGTACATGCGCATCGC +
Preference number: 5 (lower is better)
Translates to: CFAHLCRVELSDAHSLESVVWVT*AVHAHR
Trigger: GCGATGCGCATGTACCGCCAAGGTTACCCAGACCAC...ACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACGTGGTCTGGGTAACCTaGGCGGTACATGCGCATCGC +
Preference number: 5 (lower is better)
Translates to: LERLCFAHLCRVELSDAHVVWVT*AVHAHR
Trigger: GCGATGCGCATGTACCGCCAAGGTTACCCAGACCAC...GTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGGATCTTTCTCTTCTaGAAGTGCTGGCGGGCAAGG +
Preference number: 5 (lower is better)
Translates to: RPPLPRGAVRRPQPGKSPWIFLF*KCWRAR
Trigger: CCTTGCCCGCCAGCACTTCAAGAAGAGAAAGATCCA...GGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCTCCACCTTCTCAAGCTaGCTGCGCAGCTGCTGGATC +
Preference number: 5 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSSTFSS*LRSCWI
Trigger: GATCCAGCAGCTGCGCAGCAAGCTTGAGAAGGTGGA...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCTCCACCTTCTCAAGCTaGCTGCGCAGCTGCTGGATC +
Preference number: 5 (lower is better)
Translates to: ASPTSAAWSCQTPTAWKVSTFSS*LRSCWI
Trigger: GATCCAGCAGCTGCGCAGCAAGCTTGAGAAGGTGGA...GACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACGCGGACTCTCCCGTGTaGCGTTCATCAGTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: LERLCFAHLCRVELSDAHADSPV*RSSVSS
Trigger: GGAGCTGACTGATGAACGCAACACGGGAGAGTCCGC...GTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACTGCTGGAGCCGCTTCTaGGTGAAGTCCACCTCCCGA +
Preference number: 5 (lower is better)
Translates to: LERLCFAHLCRVELSDAHCWSRF*VKSTSR
Trigger: TCGGGAGGTGGACTTCACCAAGAAGCGGCTCCAGCA...GTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCTGCTGGAGCCGCTTCTaGGTGAAGTCCACCTCCCGA +
Preference number: 5 (lower is better)
Translates to: AAWSCQTPTAWKVPLTESCWSRF*VKSTSR
Trigger: TCGGGAGGTGGACTTCACCAAGAAGCGGCTCCAGCA...GCTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTTGCTGGAGCCGCTTCTaGGTGAAGTCCACCTCCCGA +
Preference number: 5 (lower is better)
Translates to: CFAHLCRVELSDAHSLESCWSRF*VKSTSR
Trigger: TCGGGAGGTGGACTTCACCAAGAAGCGGCTCCAGCA...ACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACCTCATCACTATCTGCTaGCAGGTCCCCAAGCCGCCT +
Preference number: 5 (lower is better)
Translates to: HLCRVELSDAHSLESPPDLITIC*QVPKPP
Trigger: AGGCGGCTTGGGGACCTGCAAGCAGATAGTGATGAG...GTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGGCAGGCAGAGCTGGAAGCCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTCCCTCCAGGTGCAGCTaGGTGTCCTGCAGCTCAGCT +
Preference number: 5 (lower is better)
Translates to: RQAELEAAGGCRWKRSALPSRCS*VSCSSA
Trigger: AGCTGAGCTGCAGGACACCAAGCTGCACCTGGAGGG...AAGAGCTGATCTCTTCCACCTGCACCCACCCGCGGCTTCCAGCTCTGCCTGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTTCCCGGAGCTGCTTCTaGACCTTGGCCAGAGAAGCC +
Preference number: 5 (lower is better)
Translates to: CFAHLCRVELSDAHSLESSRSCF*TLAREA
Trigger: GGCTTCTCTGGCCAAGGTCAAGAAGCAGCTCCGGGA...ACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp ACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACATCCCGGAGCTGCTTCTaGACCTTGGCCAGAGAAGCC +
Preference number: 5 (lower is better)
Translates to: TSAAWSCQTPTAWKVPLTSRSCF*TLAREA
Trigger: GGCTTCTCTGGCCAAGGTCAAGAAGCAGCTCCGGGA...TGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGTCCTGGTCCTTGACCTaGGCCTCCAAGTCCCGGAGC +
Preference number: 5 (lower is better)
Translates to: CRVELSDAHSLESPPDRKSWSLT*ASKSRS
Trigger: GCTCCGGGACTTGGAGGCCAAGGTCAAGGACCAGGA...CTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCTCCTGGTCCTTGACCTaGGCCTCCAAGTCCCGGAGC +
Preference number: 5 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRSWSLT*ASKSRS
Trigger: GCTCCGGGACTTGGAGGCCAAGGTCAAGGACCAGGA...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACCTGAGCGTGGAGAGCTaGCTCTCCAGCTCCCGTTTC +
Preference number: 5 (lower is better)
Translates to: LERLCFAHLCRVELSDAHLSVES*LSSSRF
Trigger: GAAACGGGAGCTGGAGAGCAAGCTCTCCACGCTCAG...GTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCTCTGCCAGCAGCGCTTaGGTGCGCTTCAGGTCTTTC +
Preference number: 5 (lower is better)
Translates to: ASPTSAAWSCQTPTAWKVSASSA*VRFRSF
Trigger: GAAAGACCTGAAGCGCACCAAAGCGCTGCTGGCAGA...GACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACCTGCTGACGAGGGACTaGTCCACCATGGACTGCTCC +
Preference number: 5 (lower is better)
Translates to: LERLCFAHLCRVELSDAHLLTRD*STMDCS
Trigger: GGAGCAGTCCATGGTGGACAAGTCCCTCGTCAGCAG...GTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTTCTCCATGGTTTCTTaGAGCCGACTGGCCAGGTTC +
Preference number: 5 (lower is better)
Translates to: RPPLPRGAVRRPQPGKSPFSMVS*SRLARF
Trigger: GAACCTGGCCAGTCGGCTCAAAGAAACCATGGAGAA...GGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTTTTGACAACCAGGACTaGACCCCGTCGACCCGGTCC +
Preference number: 5 (lower is better)
Translates to: CFAHLCRVELSDAHSLESFDNQD*TPSTRS
Trigger: GGACCGGGTCGACGGGGTCAAGTCCTGGTTGTCAAA...ACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCTTTGACAACCAGGACTaGACCCCGTCGACCCGGTCC +
Preference number: 5 (lower is better)
Translates to: AAWSCQTPTAWKVPLTESFDNQD*TPSTRS
Trigger: GGACCGGGTCGACGGGGTCAAGTCCTGGTTGTCAAA...GCTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTGCTTCAGCAGCTTCTTaGGTAGCTCCAGCAGCCCCC +
Preference number: 5 (lower is better)
Translates to: CFAHLCRVELSDAHSLESASAAS*VAPAAP
Trigger: GGGGGCTGCTGGAGCTACCAAAGAAGCTGCTGAAGC...ACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS TCA 90 bp TTGGCTGTCTGGGAAGTCTCTGAGGGTACCGGGCTGGTGGCAGGCTaGGGACTCCTAGGTGGAGCACTGCCGTCCTTAGAGCTGGCCTCT +
Preference number: 5 (lower is better)
Translates to: LAVWEVSEGTGLVAG*GLLGGALPSLELAS
Trigger: AGAGGCCAGCTCTAAGGACGGCAGTGCTCCACCTAGGAGTCCTCAGCCTGCCACCAGCCCGGTACCCTCAGAGACTTCCCAGACAGCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000151373.4
ENSMUST00000167856.8
CDS TCA 90 bp CATAGTGAGCGTGGGTTCGGGACTCTTGGCTGTCTGGGAAGTCTCTaGGGGTACCGGGCTGGTGGCAGGCTGAGGACTCCTAGGTGGAGC +
Preference number: 5 (lower is better)
Translates to: HSERGFGTLGCLGSL*GYRAGGRLRTPRWS
Trigger: GCTCCACCTAGGAGTCCTCAGCCTGCCACCAGCCCGGTACCCTCAGAGACTTCCCAGACAGCCAAGAGTCCCGAACCCACGCTCACTATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000151373.4
ENSMUST00000167856.8
CDS GCA 90 bp AGCCACACCTTCTCCGTCTCATACCAGGCCTCTTCAGCGGCAATCTaGTCTTCCGTCTTGGCATCAGCCGGCTCCCTGCGGTGTCCCTCG +
Preference number: 5 (lower is better)
Translates to: SHTFSVSYQASSAAI*SSVLASAGSLRCPS
Trigger: CGAGGGACACCGCAGGGAGCCGGCTGATGCCAAGACGGAAGAGCAGATTGCCGCTGAAGAGGCCTGGTATGAGACGGAGAAGGTGTGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
CDS GCA 90 bp GCCTGCTGGTTTGCTCGTCTCGTTGTTCTTCCAACCGTGCCAACGTaGCTGCCCGGAAGAACACCCGGCTTAGGCCCAGACAGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: ACWFARLVVLPTVPT*LPGRTPGLGPDSSC
Trigger: GCAGCTGCTGTCTGGGCCTAAGCCGGGTGTTCTTCCGGGCAGGCACGTTGGCACGGTTGGAAGAACAACGAGACGAGCAAACCAGCAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS GCA 90 bp CGGCTGTCTCCGCGTCCAGCAGCTGGGAGGCGGACTCTCCCGTGTTaGGTTCATCAGTCAGCTCCGATGTCAGTTCTGAGATCCGGGTCT +
Preference number: 5 (lower is better)
Translates to: RLSPRPAAGRRTLPC*VHQSAPMSVLRSGS
Trigger: AGACCCGGATCTCAGAACTGACATCGGAGCTGACTGATGAACGCAACACGGGAGAGTCCGCCTCCCAGCTGCTGGACGCGGAGACAGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS GCA 90 bp TGCCGCGGGACTTGTGGTCCTTGCCTCGGCCCCGAGACATCAGACTaGGCAGGCCTACAGAGAGCTCATCCTTGGCTGCCTCCTTCTTTG +
Preference number: 5 (lower is better)
Translates to: CRGTCGPCLGPETSD*AGLQRAHPWLPPSL
Trigger: CAAAGAAGGAGGCAGCCAAGGATGAGCTCTCTGTAGGCCTGCGCAGTCTGATGTCTCGGGGCCGAGGCAAGGACCACAAGTCCCGCGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151373.4
CDS GCA 90 bp TCTGCAGGACTCAACCGGACCTCGGGGTCAGCTCCTGTCTCCTGCTaGACGTCAGAGGCTGGTGACTTGGCCTGCTGTTTTCCAGAGGGG +
Preference number: 5 (lower is better)
Translates to: SAGLNRTSGSAPVSC*TSEAGDLACCFPEG
Trigger: CCCCTCTGGAAAACAGCAGGCCAAGTCACCAGCCTCTGACGTGCAGCAGGAGACAGGAGCTGACCCCGAGGTCCGGTTGAGTCCTGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151373.4
CDS CCA 90 bp AGTAGCCCTCTTGCCTCATCGGCATGGGCCAGTGAGCGAACCAGGTaGGAAGCCTGGTCCACAGCAGCCACGGAGTCATCTGCAACTGGC +
Preference number: 5 (lower is better)
Translates to: SSPLASSAWASERTR*EAWSTAATESSATG
Trigger: GCCAGTTGCAGATGACTCCGTGGCTGCTGTGGACCAGGCTTCCCACCTGGTTCGCTCACTGGCCCATGCCGATGAGGCAAGAGGGCTACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CCA 90 bp CAAGGTAGCCCCGGCAGGCTGCCTGGAACAGGGTCAGGTGCCTGCTaGTTTGCTCGTCTCGTTGTTCTTCCAACCGTGCCAACGTGCCTG +
Preference number: 5 (lower is better)
Translates to: QGSPGRLPGTGSGAC*FARLVVLPTVPTCL
Trigger: CAGGCACGTTGGCACGGTTGGAAGAACAACGAGACGAGCAAACCAGCAGGCACCTGACCCTGTTCCAGGCAGCCTGCCGGGGCTACCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCAGAGCCACTGGCCACCTaGATAGGGATGGGGTTGGAG +
Preference number: 5 (lower is better)
Translates to: FGETLLRPPLPRGAVRRPEPLAT*IGMGLE
Trigger: CTCCAACCCCATCCCTATCAAGGTGGCCAGTGGCTC...TGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CAA 90 bp CGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCCTCATCCCGGCTCCGTaGAGAGAAGGAAAAACGTTT +
Preference number: 5 (lower is better)
Translates to: RPPLPRGAVRRPQPGKSPLIPAP*REGKTF
Trigger: AAACGTTTTTCCTTCTCTCAACGGAGCCGGGATGAG...GGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CAA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCAGTGCTCTGAGGGGGTaGAGGTCTCCGAGGCACTCT +
Preference number: 5 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRSALRG*RSPRHS
Trigger: AGAGTGCCTCGGAGACCTCAACCCCCTCAGAGCACT...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CAA 90 bp CTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCTCCCGCCGACACCCCTaGAACATGTGCATCACCTTC +
Preference number: 5 (lower is better)
Translates to: LWRDSASPTSAAWSCQTPSRRHP*NMCITF
Trigger: GAAGGTGATGCACATGTTCAAGGGGTGTCGGCGGGA...GGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACTCCCGCCGACACCCCTaGAACATGTGCATCACCTTC +
Preference number: 5 (lower is better)
Translates to: LERLCFAHLCRVELSDAHSRRHP*NMCITF
Trigger: GAAGGTGATGCACATGTTCAAGGGGTGTCGGCGGGA...GTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCTCCCGCCGACACCCCTaGAACATGTGCATCACCTTC +
Preference number: 5 (lower is better)
Translates to: AAWSCQTPTAWKVPLTESSRRHP*NMCITF
Trigger: GAAGGTGATGCACATGTTCAAGGGGTGTCGGCGGGA...GCTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCAGCCACCTGGCCAGCTaGGTCAAAGTCCAGGGAGAG +
Preference number: 5 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRSHLAS*VKVQGE
Trigger: CTCTCCCTGGACTTTGACCAAGCTGGCCAGGTGGCT...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCAGCCACCTGGCCAGCTaGGTCAAAGTCCAGGGAGAG +
Preference number: 5 (lower is better)
Translates to: SLERLCFAHLCRVELSDASHLAS*VKVQGE
Trigger: CTCTCCCTGGACTTTGACCAAGCTGGCCAGGTGGCT...GGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCGAGTGCTGGCTGGACTaGAGAGCCCTGTTTACCAGG +
Preference number: 5 (lower is better)
Translates to: LWRDSASPTSAAWSCQTPECWLD*RALFTR
Trigger: CCTGGTAAACAGGGCTCTCAAGTCCAGCCAGCACTC...GGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCTTGTACTCCACCCAGTaGGTACCGTGGCTGTGGCCC +
Preference number: 5 (lower is better)
Translates to: SLERLCFAHLCRVELSDALYSTQ*VPWLWP
Trigger: GGGCCACAGCCACGGTACCAACTGGGTGGAGTACAA...GGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCAGCCAGCCACGTaGTACTCCACCCAGTTGGTA +
Preference number: 5 (lower is better)
Translates to: LERLCFAHLCRVELSDAHSQPAT*YSTQLV
Trigger: TACCAACTGGGTGGAGTACAACGTGGCTGGCTGGCT...GTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGTTACGACCATGTTTCTaGGTCAGGTGTGGAGCCAGG +
Preference number: 5 (lower is better)
Translates to: PTSAAWSCQTPTAWKVPLLRPCF*VRCGAR
Trigger: CCTGGCTCCACACCTGACCAAGAAACATGGTCGTAA...CAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGTGGATCTTTCTCTTCTaGAAGTGCTGGCGGGCAAGG +
Preference number: 5 (lower is better)
Translates to: PTSAAWSCQTPTAWKVPLWIFLF*KCWRAR
Trigger: CCTTGCCCGCCAGCACTTCAAGAAGAGAAAGATCCA...CAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCTCCACCTTCTCAAGCTaGCTGCGCAGCTGCTGGATC +
Preference number: 5 (lower is better)
Translates to: AAWSCQTPTAWKVPLTESSTFSS*LRSCWI
Trigger: GATCCAGCAGCTGCGCAGCAAGCTTGAGAAGGTGGA...GCTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACTCCACCTTCTCAAGCTaGCTGCGCAGCTGCTGGATC +
Preference number: 5 (lower is better)
Translates to: LERLCFAHLCRVELSDAHSTFSS*LRSCWI
Trigger: GATCCAGCAGCTGCGCAGCAAGCTTGAGAAGGTGGA...GTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTTCCACCTTCTCAAGCTaGCTGCGCAGCTGCTGGATC +
Preference number: 5 (lower is better)
Translates to: CFAHLCRVELSDAHSLESSTFSS*LRSCWI
Trigger: GATCCAGCAGCTGCGCAGCAAGCTTGAGAAGGTGGA...ACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCTCCACCTTCTCAAGCTaGCTGCGCAGCTGCTGGATC +
Preference number: 5 (lower is better)
Translates to: LWRDSASPTSAAWSCQTPSTFSS*LRSCWI
Trigger: GATCCAGCAGCTGCGCAGCAAGCTTGAGAAGGTGGA...GGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGGCGGACTCTCCCGTGTaGCGTTCATCAGTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: CRVELSDAHSLESPPDRKADSPV*RSSVSS
Trigger: GGAGCTGACTGATGAACGCAACACGGGAGAGTCCGC...CTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCGCGGACTCTCCCGTGTaGCGTTCATCAGTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: SLERLCFAHLCRVELSDAADSPV*RSSVSS
Trigger: GGAGCTGACTGATGAACGCAACACGGGAGAGTCCGC...GGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGTGCTGGAGCCGCTTCTaGGTGAAGTCCACCTCCCGA +
Preference number: 5 (lower is better)
Translates to: CRVELSDAHSLESPPDRKCWSRF*VKSTSR
Trigger: TCGGGAGGTGGACTTCACCAAGAAGCGGCTCCAGCA...CTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCTGCTGGAGCCGCTTCTaGGTGAAGTCCACCTCCCGA +
Preference number: 5 (lower is better)
Translates to: SLERLCFAHLCRVELSDACWSRF*VKSTSR
Trigger: TCGGGAGGTGGACTTCACCAAGAAGCGGCTCCAGCA...GGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACCTCATCACTATCTGCTaGCAGGTCCCCAAGCCGCCT +
Preference number: 5 (lower is better)
Translates to: LERLCFAHLCRVELSDAHLITIC*QVPKPP
Trigger: AGGCGGCTTGGGGACCTGCAAGCAGATAGTGATGAG...GTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCTCATCACTATCTGCTaGCAGGTCCCCAAGCCGCCT +
Preference number: 5 (lower is better)
Translates to: CFAHLCRVELSDAHSLESLITIC*QVPKPP
Trigger: AGGCGGCTTGGGGACCTGCAAGCAGATAGTGATGAG...ACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCTGCTGCAGTGCCCGTaGACTCTCATCACTATCTGC +
Preference number: 5 (lower is better)
Translates to: ASPTSAAWSCQTPTAWKVLLQCP*TLITIC
Trigger: GCAGATAGTGATGAGAGTCAACGGGCACTGCAGCAG...GACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGCTGCTGCAGTGCCCGTaGACTCTCATCACTATCTGC +
Preference number: 5 (lower is better)
Translates to: RLCFAHLCRVELSDAHSLLLQCP*TLITIC
Trigger: GCAGATAGTGATGAGAGTCAACGGGCACTGCAGCAG...CAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGCCCTCCAGGTGCAGCTaGGTGTCCTGCAGCTCAGCT +
Preference number: 5 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQPSRCS*VSCSSA
Trigger: AGCTGAGCTGCAGGACACCAAGCTGCACCTGGAGGG...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACCCTCCAGGTGCAGCTaGGTGTCCTGCAGCTCAGCT +
Preference number: 5 (lower is better)
Translates to: ALFGETLLRPPLPRGAVRPSRCS*VSCSSA
Trigger: AGCTGAGCTGCAGGACACCAAGCTGCACCTGGAGGG...TCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCTCCCGGAGCTGCTTCTaGACCTTGGCCAGAGAAGCC +
Preference number: 5 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRSRSCF*TLAREA
Trigger: GGCTTCTCTGGCCAAGGTCAAGAAGCAGCTCCGGGA...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGATCCTGGTCCTTGACCTaGGCCTCCAAGTCCCGGAGC +
Preference number: 5 (lower is better)
Translates to: ALFGETLLRPPLPRGAVRSWSLT*ASKSRS
Trigger: GCTCCGGGACTTGGAGGCCAAGGTCAAGGACCAGGA...TCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGATCCTCTTCCTGGTCCTaGACCTTGGCCTCCAAGTCC +
Preference number: 5 (lower is better)
Translates to: LCRVELSDAHSLESPPDRSSSWS*TLASKS
Trigger: GGACTTGGAGGCCAAGGTCAAGGACCAGGAAGAGGA...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAATCTCCAGACGCAGCTaGGCCTGCTCCAGCATCTGT +
Preference number: 5 (lower is better)
Translates to: LCRVELSDAHSLESPPDRISRRS*ACSSIC
Trigger: ACAGATGCTGGAGCAGGCCAAGCTGCGTCTGGAGAT...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp ACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAATCTCCAGACGCAGCTaGGCCTGCTCCAGCATCTGT +
Preference number: 5 (lower is better)
Translates to: TSAAWSCQTPTAWKVPLTISRRS*ACSSIC
Trigger: ACAGATGCTGGAGCAGGCCAAGCTGCGTCTGGAGAT...TGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACTGAGCGTGGAGAGCTaGCTCTCCAGCTCCCGTTTC +
Preference number: 5 (lower is better)
Translates to: FGETLLRPPLPRGAVRRPLSVES*LSSSRF
Trigger: GAAACGGGAGCTGGAGAGCAAGCTCTCCACGCTCAG...TGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCTGAGCGTGGAGAGCTaGCTCTCCAGCTCCCGTTTC +
Preference number: 5 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRLSVES*LSSSRF
Trigger: GAAACGGGAGCTGGAGAGCAAGCTCTCCACGCTCAG...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGCAGGAGGCTGAGATGGAGGTCCACCACCGGCTCCATGGAATGCCAGGCCACCTCTGCCAGCAGCGCTTaGGTGCGCTTCAGGTCTTTC +
Preference number: 5 (lower is better)
Translates to: SRRLRWRSTTGSMECQATSASSA*VRFRSF
Trigger: GAAAGACCTGAAGCGCACCAAAGCGCTGCTGGCAGA...GGTGGCCTGGCATTCCATGGAGCCGGTGGTGGACCTCCATCTCAGCCTCCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp ACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACATCTGCCAGCAGCGCTTaGGTGCGCTTCAGGTCTTTC +
Preference number: 5 (lower is better)
Translates to: TSAAWSCQTPTAWKVPLTSASSA*VRFRSF
Trigger: GAAAGACCTGAAGCGCACCAAAGCGCTGCTGGCAGA...TGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGTGGGCAATCTCCCTCTaGCTCGGGGCATTGTTCTTT +
Preference number: 5 (lower is better)
Translates to: PTSAAWSCQTPTAWKVPLWAISL*LGALFF
Trigger: AAAGAACAATGCCCCGAGCAAGAGGGAGATTGCCCA...CAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGAGCGCTGTCTTGGCTTaGGCGATGTCATCAATCTGC +
Preference number: 5 (lower is better)
Translates to: PTSAAWSCQTPTAWKVPLSAVLA*AMSSIC
Trigger: GCAGATTGATGACATCGCCAAAGCCAAGACAGCGCT...CAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCTCCTCCAGCGCTGTCTaGGCTTTGGCGATGTCATCA +
Preference number: 5 (lower is better)
Translates to: ASPTSAAWSCQTPTAWKVSSSAV*ALAMSS
Trigger: TGATGACATCGCCAAAGCCAAGACAGCGCTGGAGGA...GACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGTGGGCCACAGCTGCCTaGTGCTTCTTCATCAGCTCA +
Preference number: 5 (lower is better)
Translates to: RLCFAHLCRVELSDAHSLWATAA*CFFISS
Trigger: TGAGCTGATGAAGAAGCACAAGGCAGCTGTGGCCCA...CAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCTGCTGACGAGGGACTaGTCCACCATGGACTGCTCC +
Preference number: 5 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRLLTRD*STMDCS
Trigger: GGAGCAGTCCATGGTGGACAAGTCCCTCGTCAGCAG...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACTGCTGACGAGGGACTaGTCCACCATGGACTGCTCC +
Preference number: 5 (lower is better)
Translates to: FGETLLRPPLPRGAVRRPLLTRD*STMDCS
Trigger: GGAGCAGTCCATGGTGGACAAGTCCCTCGTCAGCAG...TGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGTTCTCCATGGTTTCTTaGAGCCGACTGGCCAGGTTC +
Preference number: 5 (lower is better)
Translates to: PTSAAWSCQTPTAWKVPLFSMVS*SRLARF
Trigger: GAACCTGGCCAGTCGGCTCAAAGAAACCATGGAGAA...CAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTCCCCACCCTGCCTCCAAAGAACCAGGGCCCCGGCTCTGCTAACCGCTGTCCCTTCTCCATGGTTTCTTaGAGCCGACTGGCCAGGTTC +
Preference number: 5 (lower is better)
Translates to: LPTLPPKNQGPGSANRCPFSMVS*SRLARF
Trigger: GAACCTGGCCAGTCGGCTCAAAGAAACCATGGAGAA...GGGACAGCGGTTAGCAGAGCCGGGGCCCTGGTTCTTTGGAGGCAGGGTGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCTCGCTCATCTCCTCCTaGGTGTCACGAAGCTGTCGC +
Preference number: 5 (lower is better)
Translates to: LWRDSASPTSAAWSCQTPSLISS*VSRSCR
Trigger: GCGACAGCTTCGTGACACCAAGGAGGAGATGAGCGA...GGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGATCGCTCATCTCCTCCTaGGTGTCACGAAGCTGTCGC +
Preference number: 5 (lower is better)
Translates to: LCRVELSDAHSLESPPDRSLISS*VSRSCR
Trigger: GCGACAGCTTCGTGACACCAAGGAGGAGATGAGCGA...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGTTTGACAACCAGGACTaGACCCCGTCGACCCGGTCC +
Preference number: 5 (lower is better)
Translates to: CRVELSDAHSLESPPDRKFDNQD*TPSTRS
Trigger: GGACCGGGTCGACGGGGTCAAGTCCTGGTTGTCAAA...CTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCGCTTCAGCAGCTTCTTaGGTAGCTCCAGCAGCCCCC +
Preference number: 5 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRASAAS*VAPAAP
Trigger: GGGGGCTGCTGGAGCTACCAAAGAAGCTGCTGAAGC...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CAA 90 bp AGGCAGGCAGAGCTGGAAGCCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTTGCTTTCGTCCAGCTTaGGTAGCTCCAGCAGCCCCC +
Preference number: 5 (lower is better)
Translates to: RQAELEAAGGCRWKRSALCFRPA*VAPAAP
Trigger: GGGGGCTGCTGGAGCTACCAAAGCTGGACGAAAGCA...AAGAGCTGATCTCTTCCACCTGCACCCACCCGCGGCTTCCAGCTCTGCCTGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100794.10
CDS-3UTR CAA 90 bp AGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGAGCTTCAGCAGCGTCTaGCTCCTCAAGGGGCTCTTT +
Preference number: 5 (lower is better)
Translates to: RLCFAHLCRVELSDAHSLSFSSV*LLKGLF
Trigger: AAAGAGCCCCTTGAGGAGCAAGACGCTGCTGAAGCT...CAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172303.10
CDS TCA 90 bp CTGCCCGCTGCAGCACAGAGCCCCGGAAGCTGCCTTCTTCACCCTTaGGGTCATCACTGGAGCTGGCTGTGCTTAGGTGTCCTGAGTCCA +
Preference number: 5 (lower is better)
Translates to: LPAAAQSPGSCLLHP*GHHWSWLCLGVLSP
Trigger: TGGACTCAGGACACCTAAGCACAGCCAGCTCCAGTGATGACCTCAAGGGTGAAGAAGGCAGCTTCCGGGGCTCTGTGCTGCAGCGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130627.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS TCA 90 bp CCAGGATGCTGCATTAGCTGTCCCTCAAGCGTCCGCACCTCTACCTaGGGTGATGGGGCTGCAGAGTGCTCTGAGGGGGTTGAGGTCTCC +
Preference number: 5 (lower is better)
Translates to: PGCCISCPSSVRTST*GDGAAECSEGVEVS
Trigger: GGAGACCTCAACCCCCTCAGAGCACTCTGCAGCCCCATCACCTCAGGTAGAGGTGCGGACGCTTGAGGGACAGCTAATGCAGCATCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130627.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS GCA 90 bp ATGGTGGGGCTGTTCCCAAAGGCTTCCAGGAGGGTGGACAGAGCCTaGCACTTCTCCACTGAGAACACCTTGGTCCCACTGGTACCCGCG +
Preference number: 5 (lower is better)
Translates to: MVGLFPKASRRVDRA*HFSTENTLVPLVPA
Trigger: CGCGGGTACCAGTGGGACCAAGGTGTTCTCAGTGGAGAAGTGGCAGGCTCTGTCCACCCTCCTGGAAGCCTTTGGGAACAGCCCCACCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS GCA 90 bp CTTTCTCTTCTTGAAGTGCTGGCGGGCAAGGTAGCCCCGGCAGGCTaGCTGGAACAGGGTCAGGTGCCTGCTGGTTTGCTCGTCTCGTTG +
Preference number: 5 (lower is better)
Translates to: LSLLEVLAGKVAPAG*LEQGQVPAGLLVSL
Trigger: CAACGAGACGAGCAAACCAGCAGGCACCTGACCCTGTTCCAGGCAGCCTGCCGGGGCTACCTTGCCCGCCAGCACTTCAAGAAGAGAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS GCA 90 bp ATCTCCTCCTTGGTGTCACGAAGCTGTCGCTGGAGCCTCTTGTTCTaGTCCTTCTCACGGTTCTCAGCTGCGGCGCGCTGGTCCCGTTCC +
Preference number: 5 (lower is better)
Translates to: ISSLVSRSCRWSLLF*SFSRFSAAARWSRS
Trigger: GGAACGGGACCAGCGCGCCGCAGCTGAGAACCGTGAGAAGGAGCAGAACAAGAGGCTCCAGCGACAGCTTCGTGACACCAAGGAGGAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS GCA 90 bp TCCTCTGCAGGACTCAACCGGACCTCGGGGTCAGCTCCTGTCTCCTaGTGCACGTCAGAGGCTGGTGACTTGGCCTGCTGTTTTCCAGAG +
Preference number: 5 (lower is better)
Translates to: SSAGLNRTSGSAPVS*CTSEAGDLACCFPE
Trigger: CTCTGGAAAACAGCAGGCCAAGTCACCAGCCTCTGACGTGCAGCAGGAGACAGGAGCTGACCCCGAGGTCCGGTTGAGTCCTGCAGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151373.4
CDS GCA 90 bp CTCGGGGTCCAGAGAAGCTGTGAAGATCCTCTCAAGTCGCTGGTGTaGCTCCTCTGCAGGACTCAACCGGACCTCGGGGTCAGCTCCTGT +
Preference number: 5 (lower is better)
Translates to: LGVQRSCEDPLKSLV*LLCRTQPDLGVSSC
Trigger: ACAGGAGCTGACCCCGAGGTCCGGTTGAGTCCTGCAGAGGAGGCACACCAGCGACTTGAGAGGATCTTCACAGCTTCTCTGGACCCCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151373.4
CDS GCA 90 bp CCCAGCAGGTATGCTGCCTTCTGGGCCCATTCGTGGCGGGCAAACTaGTTTCGTCCAGCTTCAGCAGCGTCTTGCTCCTCAAGGGGCTCT +
Preference number: 5 (lower is better)
Translates to: PSRYAAFWAHSWRAN*FRPASAASCSSRGS
Trigger: AGAGCCCCTTGAGGAGCAAGACGCTGCTGAAGCTGGACGAAAGCAGTTTGCCCGCCACGAATGGGCCCAGAAGGCAGCATACCTGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172303.10
CDS CCA 90 bp GAACCACCCGTCGATAAGCCTGACCCTCAGGGGCCCGATCCAGCATaGTTGTGCGCCGCAGTGAGAAGCCAAAGTCTCCTGTGGGTCTTC +
Preference number: 5 (lower is better)
Translates to: EPPVDKPDPQGPDPA*LCAAVRSQSLLWVF
Trigger: GAAGACCCACAGGAGACTTTGGCTTCTCACTGCGGCGCACAACCATGCTGGATCGGGCCCCTGAGGGTCAGGCTTATCGACGGGTGGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130627.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS CCA 90 bp TCCTCGAAGGAGGCTCCACGGGCCGAGCCGCCCCATTCAGGGTTCTaGAAGCCTGGTGTGTCCACGATCATCATGGAACAGAGTGAGTGC +
Preference number: 5 (lower is better)
Translates to: SSKEAPRAEPPHSGF*KPGVSTIIMEQSEC
Trigger: GCACTCACTCTGTTCCATGATGATCGTGGACACACCAGGCTTCCAGAACCCTGAATGGGGCGGCTCGGCCCGTGGAGCCTCCTTCGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CCA 90 bp CTTGCCTCATCGGCATGGGCCAGTGAGCGAACCAGGTGGGAAGCCTaGTCCACAGCAGCCACGGAGTCATCTGCAACTGGCTCCAAGTCA +
Preference number: 5 (lower is better)
Translates to: LASSAWASERTRWEA*STAATESSATGSKS
Trigger: TGACTTGGAGCCAGTTGCAGATGACTCCGTGGCTGCTGTGGACCAGGCTTCCCACCTGGTTCGCTCACTGGCCCATGCCGATGAGGCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CCA 90 bp TCCAAGCTGCAGCCCAGCAGGTATGCTGCCTTCTGGGCCCATTCGTaGCGGGCAAACTGCTTTCGTCCAGCTTTGGTAGCTCCAGCAGCC +
Preference number: 5 (lower is better)
Translates to: SKLQPSRYAAFWAHS*RANCFRPALVAPAA
Trigger: GGCTGCTGGAGCTACCAAAGCTGGACGAAAGCAGTTTGCCCGCCACGAATGGGCCCAGAAGGCAGCATACCTGCTGGGCTGCAGCTTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100794.10
CDS CCA 90 bp TTTGCCCCGCTTCCTCAACGTCTGTGGTTGGGCCCTTTTTCACACTaGAGCGGCTATGGCCGGAGACGGTGGAGCCACTGGATGACGAGG +
Preference number: 5 (lower is better)
Translates to: FAPLPQRLWLGPFSH*SGYGRRRWSHWMTR
Trigger: CCTCGTCATCCAGTGGCTCCACCGTCTCCGGCCATAGCCGCTCCAGTGTGAAAAAGGGCCCAACCACAGACGTTGAGGAAGCGGGGCAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS CCA 90 bp GTTCAACTTCGGGCCAGCCAAGTTTGGGTCAGCCAGCTCTTGTGCTaGGGCTGGGGAGCACCGCTTATTTGGGGTCTCAGGCTTGGCTGG +
Preference number: 5 (lower is better)
Translates to: VQLRASQVWVSQLLC*GWGAPLIWGLRLGW
Trigger: CCAGCCAAGCCTGAGACCCCAAATAAGCGGTGCTCCCCAGCCCCAGCACAAGAGCTGGCTGACCCAAACTTGGCTGGCCCGAAGTTGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151373.4
CDS CCA 90 bp TCCAAGCTGCAGCCCAGCAGGTATGCTGCCTTCTGGGCCCATTCGTaGCGGGCAAACTGCTTTCGTCCAGCTTCAGCAGCGTCTTGCTCC +
Preference number: 5 (lower is better)
Translates to: SKLQPSRYAAFWAHS*RANCFRPASAASCS
Trigger: GGAGCAAGACGCTGCTGAAGCTGGACGAAAGCAGTTTGCCCGCCACGAATGGGCCCAGAAGGCAGCATACCTGCTGGGCTGCAGCTTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGAAGTGAAGATGGAGGGGAGATTCCCAAGGCATCCCACAGGCCCCAGCTGCAGGCCAGTGAACCGAACTaGGCTGCCCGCTGCAGCACA +
Preference number: 5 (lower is better)
Translates to: RSEDGGEIPKASHRPQLQASEPN*AARCST
Trigger: TGTGCTGCAGCGGGCAGCCAAGTTCGGTTCACTGGC...CTGCAGCTGGGGCCTGTGGGATGCCTTGGGAATCTCCCCTCCATCTTCACTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
CDS-3UTR CAA 90 bp AGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCGCCAGTGAACCGAACTaGGCTGCCCGCTGCAGCACA +
Preference number: 5 (lower is better)
Translates to: SNGRREGGWQTGPAPGTAASEPN*AARCST
Trigger: TGTGCTGCAGCGGGCAGCCAAGTTCGGTTCACTGGC...GGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
CDS-3UTR CAA 90 bp AAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCAGTGCTCTGAGGGGGTaGAGGTCTCCGAGGCACTCT +
Preference number: 5 (lower is better)
Translates to: KPRCFPCRSAVRWGQWCPSALRG*RSPRHS
Trigger: AGAGTGCCTCGGAGACCTCAACCCCCTCAGAGCACT...GGGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CAA 90 bp AGCAGGAGGCTGAGATGGAGGTCCACCACCGGCTCCATGGAATGCCAGGCCACCAGGACGCTAGACTCGTaGAGGTATACCAGTGAGGCC +
Preference number: 5 (lower is better)
Translates to: SRRLRWRSTTGSMECQATRTLDS*RYTSEA
Trigger: GGCCTCACTGGTATACCTCAACGAGTCTAGCGTCCT...GGTGGCCTGGCATTCCATGGAGCCGGTGGTGGACCTCCATCTCAGCCTCCTGCT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp ACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAAGGACGCTAGACTCGTaGAGGTATACCAGTGAGGCC +
Preference number: 5 (lower is better)
Translates to: TSAAWSCQTPTAWKVPLTRTLDS*RYTSEA
Trigger: GGCCTCACTGGTATACCTCAACGAGTCTAGCGTCCT...TGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTAGGACGCTAGACTCGTaGAGGTATACCAGTGAGGCC +
Preference number: 5 (lower is better)
Translates to: CFAHLCRVELSDAHSLESRTLDS*RYTSEA
Trigger: GGCCTCACTGGTATACCTCAACGAGTCTAGCGTCCT...ACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAGGACGCTAGACTCGTaGAGGTATACCAGTGAGGCC +
Preference number: 5 (lower is better)
Translates to: LCRVELSDAHSLESPPDRRTLDS*RYTSEA
Trigger: GGCCTCACTGGTATACCTCAACGAGTCTAGCGTCCT...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCATCCCGCCGACACCCCTaGAACATGTGCATCACCTTC +
Preference number: 5 (lower is better)
Translates to: FGETLLRPPLPRGAVRRPSRRHP*NMCITF
Trigger: GAAGGTGATGCACATGTTCAAGGGGTGTCGGCGGGA...TGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGGCAGGCAGAGCTGGAAGCCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTGAGTGCTGGCTGGACTaGAGAGCCCTGTTTACCAGG +
Preference number: 5 (lower is better)
Translates to: RQAELEAAGGCRWKRSALECWLD*RALFTR
Trigger: CCTGGTAAACAGGGCTCTCAAGTCCAGCCAGCACTC...AAGAGCTGATCTCTTCCACCTGCACCCACCCGCGGCTTCCAGCTCTGCCTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCGAGTGCTGGCTGGACTaGAGAGCCCTGTTTACCAGG +
Preference number: 5 (lower is better)
Translates to: SLERLCFAHLCRVELSDAECWLD*RALFTR
Trigger: CCTGGTAAACAGGGCTCTCAAGTCCAGCCAGCACTC...GGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCTTGTACTCCACCCAGTaGGTACCGTGGCTGTGGCCC +
Preference number: 5 (lower is better)
Translates to: KPRCFPCRSAVRWGQWCPLYSTQ*VPWLWP
Trigger: GGGCCACAGCCACGGTACCAACTGGGTGGAGTACAA...GGGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCAAGCCAGCCAGCCACGTaGTACTCCACCCAGTTGGTA +
Preference number: 5 (lower is better)
Translates to: FGETLLRPPLPRGAVRRPSQPAT*YSTQLV
Trigger: TACCAACTGGGTGGAGTACAACGTGGCTGGCTGGCT...TGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGAGTGGTCTGGGTAACCTaGGCGGTACATGCGCATCGC +
Preference number: 5 (lower is better)
Translates to: ALFGETLLRPPLPRGAVRVVWVT*AVHAHR
Trigger: GCGATGCGCATGTACCGCCAAGGTTACCCAGACCAC...TCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCTGGATCTTTCTCTTCTaGAAGTGCTGGCGGGCAAGG +
Preference number: 5 (lower is better)
Translates to: ASPTSAAWSCQTPTAWKVWIFLF*KCWRAR
Trigger: CCTTGCCCGCCAGCACTTCAAGAAGAGAAAGATCCA...GACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCTGGATCTTTCTCTTCTaGAAGTGCTGGCGGGCAAGG +
Preference number: 5 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSWIFLF*KCWRAR
Trigger: CCTTGCCCGCCAGCACTTCAAGAAGAGAAAGATCCA...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCCAGTCCTTCACCCCCTaGTTCTTCTTGATGTTCTTC +
Preference number: 5 (lower is better)
Translates to: RPPLPRGAVRRPQPGKSPQSFTP*FFLMFF
Trigger: GAAGAACATCAAGAAGAACAAGGGGGTGAAGGACTG...GGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCTCCACCTTCTCAAGCTaGCTGCGCAGCTGCTGGATC +
Preference number: 5 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRSTFSS*LRSCWI
Trigger: GATCCAGCAGCTGCGCAGCAAGCTTGAGAAGGTGGA...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGGCGGACTCTCCCGTGTaGCGTTCATCAGTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQADSPV*RSSVSS
Trigger: GGAGCTGACTGATGAACGCAACACGGGAGAGTCCGC...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGTGCTGGAGCCGCTTCTaGGTGAAGTCCACCTCCCGA +
Preference number: 5 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQCWSRF*VKSTSR
Trigger: TCGGGAGGTGGACTTCACCAAGAAGCGGCTCCAGCA...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCTCATCACTATCTGCTaGCAGGTCCCCAAGCCGCCT +
Preference number: 5 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRLITIC*QVPKPP
Trigger: AGGCGGCTTGGGGACCTGCAAGCAGATAGTGATGAG...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGGCAGGCAGAGCTGGAAGCCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTCTCATCACTATCTGCTaGCAGGTCCCCAAGCCGCCT +
Preference number: 5 (lower is better)
Translates to: RQAELEAAGGCRWKRSALLITIC*QVPKPP
Trigger: AGGCGGCTTGGGGACCTGCAAGCAGATAGTGATGAG...AAGAGCTGATCTCTTCCACCTGCACCCACCCGCGGCTTCCAGCTCTGCCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACTCATCACTATCTGCTaGCAGGTCCCCAAGCCGCCT +
Preference number: 5 (lower is better)
Translates to: FGETLLRPPLPRGAVRRPLITIC*QVPKPP
Trigger: AGGCGGCTTGGGGACCTGCAAGCAGATAGTGATGAG...TGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACCTGCTGCAGTGCCCGTaGACTCTCATCACTATCTGC +
Preference number: 5 (lower is better)
Translates to: LERLCFAHLCRVELSDAHLLQCP*TLITIC
Trigger: GCAGATAGTGATGAGAGTCAACGGGCACTGCAGCAG...GTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGCAGGAGGCTGAGATGGAGGTCCACCACCGGCTCCATGGAATGCCAGGCCACCCTGCTGCAGTGCCCGTaGACTCTCATCACTATCTGC +
Preference number: 5 (lower is better)
Translates to: SRRLRWRSTTGSMECQATLLQCP*TLITIC
Trigger: GCAGATAGTGATGAGAGTCAACGGGCACTGCAGCAG...GGTGGCCTGGCATTCCATGGAGCCGGTGGTGGACCTCCATCTCAGCCTCCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGCTCAGCTGTGAGCCTTaGGCACTTCTTCTTGAGCTG +
Preference number: 5 (lower is better)
Translates to: RLCFAHLCRVELSDAHSLLSCEP*ALLLEL
Trigger: CAGCTCAAGAAGAAGTGCCAAAGGCTCACAGCTGAG...CAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTCTGGAGAAGTGAAGATGGAGGGGAGATTCCCAAGGCATCCCACAGGCCCCAGCCCTCCAGGTGCAGCTaGGTGTCCTGCAGCTCAGCT +
Preference number: 5 (lower is better)
Translates to: LWRSEDGGEIPKASHRPQPSRCS*VSCSSA
Trigger: AGCTGAGCTGCAGGACACCAAGCTGCACCTGGAGGG...CTGGGGCCTGTGGGATGCCTTGGGAATCTCCCCTCCATCTTCACTTCTCCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCTCCCGGAGCTGCTTCTaGACCTTGGCCAGAGAAGCC +
Preference number: 5 (lower is better)
Translates to: KPRCFPCRSAVRWGQWCPSRSCF*TLAREA
Trigger: GGCTTCTCTGGCCAAGGTCAAGAAGCAGCTCCGGGA...GGGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGAAGTGAAGATGGAGGGGAGATTCCCAAGGCATCCCACAGGCCCCAGCTGCAGTCCTGGTCCTTGACCTaGGCCTCCAAGTCCCGGAGC +
Preference number: 5 (lower is better)
Translates to: RSEDGGEIPKASHRPQLQSWSLT*ASKSRS
Trigger: GCTCCGGGACTTGGAGGCCAAGGTCAAGGACCAGGA...CTGCAGCTGGGGCCTGTGGGATGCCTTGGGAATCTCCCCTCCATCTTCACTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCTCCTGGTCCTTGACCTaGGCCTCCAAGTCCCGGAGC +
Preference number: 5 (lower is better)
Translates to: SNGRREGGWQTGPAPGTASWSLT*ASKSRS
Trigger: GCTCCGGGACTTGGAGGCCAAGGTCAAGGACCAGGA...GGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAATCCTCTTCCTGGTCCTaGACCTTGGCCTCCAAGTCC +
Preference number: 5 (lower is better)
Translates to: SAAWSCQTPTAWKVPLTESSSWS*TLASKS
Trigger: GGACTTGGAGGCCAAGGTCAAGGACCAGGAAGAGGA...TTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCTCCTCTTCCTGGTCCTaGACCTTGGCCTCCAAGTCC +
Preference number: 5 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRSSSWS*TLASKS
Trigger: GGACTTGGAGGCCAAGGTCAAGGACCAGGAAGAGGA...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCAATCTCCAGACGCAGCTaGGCCTGCTCCAGCATCTGT +
Preference number: 5 (lower is better)
Translates to: FGETLLRPPLPRGAVRRPISRRS*ACSSIC
Trigger: ACAGATGCTGGAGCAGGCCAAGCTGCGTCTGGAGAT...TGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGGCAGGCAGAGCTGGAAGCCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTATCTCCAGACGCAGCTaGGCCTGCTCCAGCATCTGT +
Preference number: 5 (lower is better)
Translates to: RQAELEAAGGCRWKRSALISRRS*ACSSIC
Trigger: ACAGATGCTGGAGCAGGCCAAGCTGCGTCTGGAGAT...AAGAGCTGATCTCTTCCACCTGCACCCACCCGCGGCTTCCAGCTCTGCCTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCATCTCCAGACGCAGCTaGGCCTGCTCCAGCATCTGT +
Preference number: 5 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRISRRS*ACSSIC
Trigger: ACAGATGCTGGAGCAGGCCAAGCTGCGTCTGGAGAT...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGATCTCCAGACGCAGCTaGGCCTGCTCCAGCATCTGT +
Preference number: 5 (lower is better)
Translates to: CRVELSDAHSLESPPDRKISRRS*ACSSIC
Trigger: ACAGATGCTGGAGCAGGCCAAGCTGCGTCTGGAGAT...CTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACTGAGCGTGGAGAGCTaGCTCTCCAGCTCCCGTTTC +
Preference number: 5 (lower is better)
Translates to: ALFGETLLRPPLPRGAVRLSVES*LSSSRF
Trigger: GAAACGGGAGCTGGAGAGCAAGCTCTCCACGCTCAG...TCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAATCTGCCAGCAGCGCTTaGGTGCGCTTCAGGTCTTTC +
Preference number: 5 (lower is better)
Translates to: SAAWSCQTPTAWKVPLTESASSA*VRFRSF
Trigger: GAAAGACCTGAAGCGCACCAAAGCGCTGCTGGCAGA...TTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCTCTGCCAGCAGCGCTTaGGTGCGCTTCAGGTCTTTC +
Preference number: 5 (lower is better)
Translates to: SLERLCFAHLCRVELSDASASSA*VRFRSF
Trigger: GAAAGACCTGAAGCGCACCAAAGCGCTGCTGGCAGA...GGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCTGGGCAATCTCCCTCTaGCTCGGGGCATTGTTCTTT +
Preference number: 5 (lower is better)
Translates to: ASPTSAAWSCQTPTAWKVWAISL*LGALFF
Trigger: AAAGAACAATGCCCCGAGCAAGAGGGAGATTGCCCA...GACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGTGGGCAATCTCCCTCTaGCTCGGGGCATTGTTCTTT +
Preference number: 5 (lower is better)
Translates to: RLCFAHLCRVELSDAHSLWAISL*LGALFF
Trigger: AAAGAACAATGCCCCGAGCAAGAGGGAGATTGCCCA...CAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACTCCTCCAGCGCTGTCTaGGCTTTGGCGATGTCATCA +
Preference number: 5 (lower is better)
Translates to: LERLCFAHLCRVELSDAHSSSAV*ALAMSS
Trigger: TGATGACATCGCCAAAGCCAAGACAGCGCTGGAGGA...GTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCTCCTCCAGCGCTGTCTaGGCTTTGGCGATGTCATCA +
Preference number: 5 (lower is better)
Translates to: LWRDSASPTSAAWSCQTPSSSAV*ALAMSS
Trigger: TGATGACATCGCCAAAGCCAAGACAGCGCTGGAGGA...GGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp ACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACATCCTCCAGCGCTGTCTaGGCTTTGGCGATGTCATCA +
Preference number: 5 (lower is better)
Translates to: TSAAWSCQTPTAWKVPLTSSSAV*ALAMSS
Trigger: TGATGACATCGCCAAAGCCAAGACAGCGCTGGAGGA...TGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCCTCTTCCAGCCGGTTTaGAATCTCGTTTTTCTCACG +
Preference number: 5 (lower is better)
Translates to: RPPLPRGAVRRPQPGKSPLFQPV*NLVFLT
Trigger: CGTGAGAAAAACGAGATTCAAAACCGGCTGGAAGAG...GGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACTGGGCCACAGCTGCCTaGTGCTTCTTCATCAGCTCA +
Preference number: 5 (lower is better)
Translates to: LERLCFAHLCRVELSDAHWATAA*CFFISS
Trigger: TGAGCTGATGAAGAAGCACAAGGCAGCTGTGGCCCA...GTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGATGGGCCACAGCTGCCTaGTGCTTCTTCATCAGCTCA +
Preference number: 5 (lower is better)
Translates to: LCRVELSDAHSLESPPDRWATAA*CFFISS
Trigger: TGAGCTGATGAAGAAGCACAAGGCAGCTGTGGCCCA...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGCTGCTGACGAGGGACTaGTCCACCATGGACTGCTCC +
Preference number: 5 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQLLTRD*STMDCS
Trigger: GGAGCAGTCCATGGTGGACAAGTCCCTCGTCAGCAG...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCCTGCTGACGAGGGACTaGTCCACCATGGACTGCTCC +
Preference number: 5 (lower is better)
Translates to: KPRCFPCRSAVRWGQWCPLLTRD*STMDCS
Trigger: GGAGCAGTCCATGGTGGACAAGTCCCTCGTCAGCAG...GGGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCTTCTCCATGGTTTCTTaGAGCCGACTGGCCAGGTTC +
Preference number: 5 (lower is better)
Translates to: ASPTSAAWSCQTPTAWKVFSMVS*SRLARF
Trigger: GAACCTGGCCAGTCGGCTCAAAGAAACCATGGAGAA...GACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCTCGCTCATCTCCTCCTaGGTGTCACGAAGCTGTCGC +
Preference number: 5 (lower is better)
Translates to: SLERLCFAHLCRVELSDASLISS*VSRSCR
Trigger: GCGACAGCTTCGTGACACCAAGGAGGAGATGAGCGA...GGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCATCGCTCATCTCCTCCTaGGTGTCACGAAGCTGTCGC +
Preference number: 5 (lower is better)
Translates to: FGETLLRPPLPRGAVRRPSLISS*VSRSCR
Trigger: GCGACAGCTTCGTGACACCAAGGAGGAGATGAGCGA...TGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGTCGCTCATCTCCTCCTaGGTGTCACGAAGCTGTCGC +
Preference number: 5 (lower is better)
Translates to: CRVELSDAHSLESPPDRKSLISS*VSRSCR
Trigger: GCGACAGCTTCGTGACACCAAGGAGGAGATGAGCGA...CTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACTTTGACAACCAGGACTaGACCCCGTCGACCCGGTCC +
Preference number: 5 (lower is better)
Translates to: LSLERLCFAHLCRVELSDFDNQD*TPSTRS
Trigger: GGACCGGGTCGACGGGGTCAAGTCCTGGTTGTCAAA...GTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGTTTGACAACCAGGACTaGACCCCGTCGACCCGGTCC +
Preference number: 5 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQFDNQD*TPSTRS
Trigger: GGACCGGGTCGACGGGGTCAAGTCCTGGTTGTCAAA...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGGCTTCAGCAGCTTCTTaGGTAGCTCCAGCAGCCCCC +
Preference number: 5 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQASAAS*VAPAAP
Trigger: GGGGGCTGCTGGAGCTACCAAAGAAGCTGCTGAAGC...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CAA 90 bp CTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCTTCAGCAGCTTCTTaGGTAGCTCCAGCAGCCCCC +
Preference number: 5 (lower is better)
Translates to: LSLERLCFAHLCRVELSDASAAS*VAPAAP
Trigger: GGGGGCTGCTGGAGCTACCAAAGAAGCTGCTGAAGC...GTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CAA 90 bp GCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACTGGGGCTGCTCCGTTaGCTCCTATGCTTGCTTCGG +
Preference number: 5 (lower is better)
Translates to: ALFGETLLRPPLPRGAVRLGLLR*LLCLLR
Trigger: CCGAAGCAAGCATAGGAGCAAACGGAGCAGCCCCAG...TCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS-3UTR CAA 90 bp GCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCTTCCTCAAGGGGCTCTTaGGTAGCTCCAGCAGCCCCC +
Preference number: 5 (lower is better)
Translates to: AMAEGKGDGKQVQHQVLPSSRGS*VAPAAP
Trigger: GGGGGCTGCTGGAGCTACCAAAGAGCCCCTTGAGGA...AGGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000172303.10
CDS TCA 90 bp AGTCCAGGGAGAGGATCTGGGAGAAGCGGGTGGCACTGCCATTCATaGTGGTGGGGCTGTTCCCAAAGGCTTCCAGGAGGGTGGACAGAG +
Preference number: 5 (lower is better)
Translates to: SPGRGSGRSGWHCHS*WWGCSQRLPGGWTE
Trigger: CTCTGTCCACCCTCCTGGAAGCCTTTGGGAACAGCCCCACCATCATGAATGGCAGTGCCACCCGCTTCTCCCAGATCCTCTCCCTGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS TCA 90 bp CCTCGGGGGAGATGGCCAGCACCTTCATGGCAGCCTGGAGCTTACTaGACTGCTGTGCAGCCTTCTGCTTCTCCTCAGGCTTGGACAGTG +
Preference number: 5 (lower is better)
Translates to: PRGRWPAPSWQPGAY*TAVQPSASPQAWTV
Trigger: CACTGTCCAAGCCTGAGGAGAAGCAGAAGGCTGCACAGCAGTTCAGTAAGCTCCAGGCTGCCATGAAGGTGCTGGCCATCTCCCCCGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS GCA 90 bp CCCGTCGATAAGCCTGACCCTCAGGGGCCCGATCCAGCATGGTTGTaGGCCGCAGTGAGAAGCCAAAGTCTCCTGTGGGTCTTCGTTGTA +
Preference number: 5 (lower is better)
Translates to: PVDKPDPQGPDPAWL*AAVRSQSLLWVFVV
Trigger: TACAACGAAGACCCACAGGAGACTTTGGCTTCTCACTGCGGCGCACAACCATGCTGGATCGGGCCCCTGAGGGTCAGGCTTATCGACGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130627.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS GCA 90 bp CCCAGCAGGTATGCTGCCTTCTGGGCCCATTCGTGGCGGGCAAACTaGTTTCGTCCAGCAGCAACTGCCAGCTCTTTGGTAGCTCCAGCA +
Preference number: 5 (lower is better)
Translates to: PSRYAAFWAHSWRAN*FRPAATASSLVAPA
Trigger: TGCTGGAGCTACCAAAGAGCTGGCAGTTGCTGCTGGACGAAAGCAGTTTGCCCGCCACGAATGGGCCCAGAAGGCAGCATACCTGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000000645.13
CDS GCA 90 bp TCGTGGTTTCGGACCTGCTGGCCCTCCAGGTGCAGCTTGGTGTCCTaGAGCTCAGCTGTGAGCCTTTGGCACTTCTTCTTGAGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: SWFRTCWPSRCSLVS*SSAVSLWHFFLSCC
Trigger: GCAGCAGCTCAAGAAGAAGTGCCAAAGGCTCACAGCTGAGCTGCAGGACACCAAGCTGCACCTGGAGGGCCAGCAGGTCCGAAACCACGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS GCA 90 bp CTGTCGCTGGAGCCTCTTGTTCTGCTCCTTCTCACGGTTCTCAGCTaGGGCGCGCTGGTCCCGTTCCTCAGTCAGCTTCTCCATGGTTTC +
Preference number: 5 (lower is better)
Translates to: LSLEPLVLLLLTVLS*GALVPFLSQLLHGF
Trigger: GAAACCATGGAGAAGCTGACTGAGGAACGGGACCAGCGCGCCGCAGCTGAGAACCGTGAGAAGGAGCAGAACAAGAGGCTCCAGCGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS GCA 90 bp CAGAGAAGCTGTGAAGATCCTCTCAAGTCGCTGGTGTGCCTCCTCTaGAGGACTCAACCGGACCTCGGGGTCAGCTCCTGTCTCCTGCTG +
Preference number: 5 (lower is better)
Translates to: QRSCEDPLKSLVCLL*RTQPDLGVSSCLLL
Trigger: CAGCAGGAGACAGGAGCTGACCCCGAGGTCCGGTTGAGTCCTGCAGAGGAGGCACACCAGCGACTTGAGAGGATCTTCACAGCTTCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151373.4
CDS CCA 90 bp TCCAAGCTGCAGCCCAGCAGGTATGCTGCCTTCTGGGCCCATTCGTaGCGGGCAAACTGCTTTCGTCCAGCAGCAACTGCCAGCTCTTTG +
Preference number: 5 (lower is better)
Translates to: SKLQPSRYAAFWAHS*RANCFRPAATASSL
Trigger: CAAAGAGCTGGCAGTTGCTGCTGGACGAAAGCAGTTTGCCCGCCACGAATGGGCCCAGAAGGCAGCATACCTGCTGGGCTGCAGCTTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000000645.13
CDS CCA 90 bp CTGGCAAGCTCGCTCATCTCCTCCTTGGTGTCACGAAGCTGTCGCTaGAGCCTCTTGTTCTGCTCCTTCTCACGGTTCTCAGCTGCGGCG +
Preference number: 5 (lower is better)
Translates to: LASSLISSLVSRSCR*SLLFCSFSRFSAAA
Trigger: CGCCGCAGCTGAGAACCGTGAGAAGGAGCAGAACAAGAGGCTCCAGCGACAGCTTCGTGACACCAAGGAGGAGATGAGCGAGCTTGCCAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CCA 90 bp GGCCCCGAGACATCAGACTGCGCAGGCCTACAGAGAGCTCATCCTTaGCTGCCTCCTTCTTTGTTTCCGGCTTTGGTGGAGCAGGAGGAG +
Preference number: 5 (lower is better)
Translates to: GPETSDCAGLQRAHP*LPPSLFPALVEQEE
Trigger: CTCCTCCTGCTCCACCAAAGCCGGAAACAAAGAAGGAGGCAGCCAAGGATGAGCTCTCTGTAGGCCTGCGCAGTCTGATGTCTCGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151373.4
CDS-3UTR CAA 90 bp CTCCCCACCCTGCCTCCAAAGAACCAGGGCCCCGGCTCTGCTAACCGCTGTCCCTTCCGCCCGCCATCTTaGTCCTTATCTTTCTTCATG +
Preference number: 5 (lower is better)
Translates to: LPTLPPKNQGPGSANRCPFRPPS*SLSFFM
Trigger: CATGAAGAAAGATAAGGACAAAGATGGCGGGCGGAA...GGGACAGCGGTTAGCAGAGCCGGGGCCCTGGTTCTTTGGAGGCAGGGTGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
CDS-3UTR CAA 90 bp AAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCGAGCCACTGGCCACCTaGATAGGGATGGGGTTGGAG +
Preference number: 5 (lower is better)
Translates to: KAKVFSMQIGSQVGAVVPEPLAT*IGMGLE
Trigger: CTCCAACCCCATCCCTATCAAGGTGGCCAGTGGCTC...GGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CAA 90 bp CAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGGCCAGTGAACCGAACTaGGCTGCCCGCTGCAGCACA +
Preference number: 5 (lower is better)
Translates to: QKAKVFSMQIGSQVGAVVASEPN*AARCST
Trigger: TGTGCTGCAGCGGGCAGCCAAGTTCGGTTCACTGGC...CACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CAA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTCATCCCGGCTCCGTaGAGAGAAGGAAAAACGTTT +
Preference number: 5 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSLIPAP*REGKTF
Trigger: AAACGTTTTTCCTTCTCTCAACGGAGCCGGGATGAG...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CAA 90 bp GCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCTCATCCCGGCTCCGTaGAGAGAAGGAAAAACGTTT +
Preference number: 5 (lower is better)
Translates to: ASPTSAAWSCQTPTAWKVLIPAP*REGKTF
Trigger: AAACGTTTTTCCTTCTCTCAACGGAGCCGGGATGAG...GACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CAA 90 bp AAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCAGTGCTCTGAGGGGGTaGAGGTCTCCGAGGCACTCT +
Preference number: 5 (lower is better)
Translates to: KAKVFSMQIGSQVGAVVPSALRG*RSPRHS
Trigger: AGAGTGCCTCGGAGACCTCAACCCCCTCAGAGCACT...GGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CAA 90 bp AGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCGATCCAGCATGGTaGTGCGCCGCAGTGAGAAGC +
Preference number: 5 (lower is better)
Translates to: RKPRCFPCRSAVRWGQWCPDPAW*CAAVRS
Trigger: GCTTCTCACTGCGGCGCACAACCATGCTGGATCGGG...GCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CAA 90 bp TCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCAGGACGCTAGACTCGTaGAGGTATACCAGTGAGGCC +
Preference number: 5 (lower is better)
Translates to: SLERLCFAHLCRVELSDARTLDS*RYTSEA
Trigger: GGCCTCACTGGTATACCTCAACGAGTCTAGCGTCCT...GGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGATCCCGCCGACACCCCTaGAACATGTGCATCACCTTC +
Preference number: 5 (lower is better)
Translates to: ALFGETLLRPPLPRGAVRSRRHP*NMCITF
Trigger: GAAGGTGATGCACATGTTCAAGGGGTGTCGGCGGGA...TCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGTCCCGCCGACACCCCTaGAACATGTGCATCACCTTC +
Preference number: 5 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQSRRHP*NMCITF
Trigger: GAAGGTGATGCACATGTTCAAGGGGTGTCGGCGGGA...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCTAGCCACCTGGCCAGCTaGGTCAAAGTCCAGGGAGAG +
Preference number: 5 (lower is better)
Translates to: AMAEGKGDGKQVQHQVLPSHLAS*VKVQGE
Trigger: CTCTCCCTGGACTTTGACCAAGCTGGCCAGGTGGCT...AGGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGAAGTGAAGATGGAGGGGAGATTCCCAAGGCATCCCACAGGCCCCAGCTGCAGAGCCACCTGGCCAGCTaGGTCAAAGTCCAGGGAGAG +
Preference number: 5 (lower is better)
Translates to: RSEDGGEIPKASHRPQLQSHLAS*VKVQGE
Trigger: CTCTCCCTGGACTTTGACCAAGCTGGCCAGGTGGCT...CTGCAGCTGGGGCCTGTGGGATGCCTTGGGAATCTCCCCTCCATCTTCACTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGATGCTTCTCCTCAGGCTaGGACAGTGGCACAATTCCA +
Preference number: 5 (lower is better)
Translates to: LCRVELSDAHSLESPPDRCFSSG*DSGTIP
Trigger: TGGAATTGTGCCACTGTCCAAGCCTGAGGAGAAGCA...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCTGCTTCTCCTCAGGCTaGGACAGTGGCACAATTCCA +
Preference number: 5 (lower is better)
Translates to: LWRDSASPTSAAWSCQTPCFSSG*DSGTIP
Trigger: TGGAATTGTGCCACTGTCCAAGCCTGAGGAGAAGCA...GGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGCCTTTTAGCTGGTGTTaGAAGATAGCCGAGGACAGC +
Preference number: 5 (lower is better)
Translates to: RLCFAHLCRVELSDAHSLPFSWC*KIAEDS
Trigger: GCTGTCCTCGGCTATCTTCAAACACCAGCTAAAAGG...CAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTCTGGAGAAGTGAAGATGGAGGGGAGATTCCCAAGGCATCCCACAGGCCCCAGTTGTACTCCACCCAGTaGGTACCGTGGCTGTGGCCC +
Preference number: 5 (lower is better)
Translates to: LWRSEDGGEIPKASHRPQLYSTQ*VPWLWP
Trigger: GGGCCACAGCCACGGTACCAACTGGGTGGAGTACAA...CTGGGGCCTGTGGGATGCCTTGGGAATCTCCCCTCCATCTTCACTTCTCCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCTTGTACTCCACCCAGTaGGTACCGTGGCTGTGGCCC +
Preference number: 5 (lower is better)
Translates to: KAKVFSMQIGSQVGAVVPLYSTQ*VPWLWP
Trigger: GGGCCACAGCCACGGTACCAACTGGGTGGAGTACAA...GGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACAGCCAGCCAGCCACGTaGTACTCCACCCAGTTGGTA +
Preference number: 5 (lower is better)
Translates to: LSLERLCFAHLCRVELSDSQPAT*YSTQLV
Trigger: TACCAACTGGGTGGAGTACAACGTGGCTGGCTGGCT...GTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGAGCCAGCCAGCCACGTaGTACTCCACCCAGTTGGTA +
Preference number: 5 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQSQPAT*YSTQLV
Trigger: TACCAACTGGGTGGAGTACAACGTGGCTGGCTGGCT...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTCTGGAGAAGTGAAGATGGAGGGGAGATTCCCAAGGCATCCCACAGGCCCCAGGTGGTCTGGGTAACCTaGGCGGTACATGCGCATCGC +
Preference number: 5 (lower is better)
Translates to: LWRSEDGGEIPKASHRPQVVWVT*AVHAHR
Trigger: GCGATGCGCATGTACCGCCAAGGTTACCCAGACCAC...CTGGGGCCTGTGGGATGCCTTGGGAATCTCCCCTCCATCTTCACTTCTCCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCTTACGACCATGTTTCTaGGTCAGGTGTGGAGCCAGG +
Preference number: 5 (lower is better)
Translates to: LWRDSASPTSAAWSCQTPLRPCF*VRCGAR
Trigger: CCTGGCTCCACACCTGACCAAGAAACATGGTCGTAA...GGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGATGGATCTTTCTCTTCTaGAAGTGCTGGCGGGCAAGG +
Preference number: 5 (lower is better)
Translates to: LCRVELSDAHSLESPPDRWIFLF*KCWRAR
Trigger: CCTTGCCCGCCAGCACTTCAAGAAGAGAAAGATCCA...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCTGGATCTTTCTCTTCTaGAAGTGCTGGCGGGCAAGG +
Preference number: 5 (lower is better)
Translates to: AAWSCQTPTAWKVPLTESWIFLF*KCWRAR
Trigger: CCTTGCCCGCCAGCACTTCAAGAAGAGAAAGATCCA...GCTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCTGGATCTTTCTCTTCTaGAAGTGCTGGCGGGCAAGG +
Preference number: 5 (lower is better)
Translates to: LWRDSASPTSAAWSCQTPWIFLF*KCWRAR
Trigger: CCTTGCCCGCCAGCACTTCAAGAAGAGAAAGATCCA...GGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACCCCCTTGTTCTTCTaGATGTTCTTCTGCACACAG +
Preference number: 5 (lower is better)
Translates to: PTSAAWSCQTPTAWKVPLTPLFF*MFFCTQ
Trigger: CTGTGTGCAGAAGAACATCAAGAAGAACAAGGGGGT...CAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGCAGTCCTTCACCCCCTaGTTCTTCTTGATGTTCTTC +
Preference number: 5 (lower is better)
Translates to: PTSAAWSCQTPTAWKVPLQSFTP*FFLMFF
Trigger: GAAGAACATCAAGAAGAACAAGGGGGTGAAGGACTG...CAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCTGGATCTCCTCGTCTTaGTTTCGGATCTGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSWISSS*FRICSS
Trigger: AGAGGAGCAGATCCGAAACAAAGACGAGGAGATCCA...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGTCCACCTTCTCAAGCTaGCTGCGCAGCTGCTGGATC +
Preference number: 5 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQSTFSS*LRSCWI
Trigger: GATCCAGCAGCTGCGCAGCAAGCTTGAGAAGGTGGA...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCGCGGACTCTCCCGTGTaGCGTTCATCAGTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: SNGRREGGWQTGPAPGTAADSPV*RSSVSS
Trigger: GGAGCTGACTGATGAACGCAACACGGGAGAGTCCGC...GGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCGCGGACTCTCCCGTGTaGCGTTCATCAGTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: KAKVFSMQIGSQVGAVVPADSPV*RSSVSS
Trigger: GGAGCTGACTGATGAACGCAACACGGGAGAGTCCGC...GGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCTGCTGGAGCCGCTTCTaGGTGAAGTCCACCTCCCGA +
Preference number: 5 (lower is better)
Translates to: KAKVFSMQIGSQVGAVVPCWSRF*VKSTSR
Trigger: TCGGGAGGTGGACTTCACCAAGAAGCGGCTCCAGCA...GGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACTCATCACTATCTGCTaGCAGGTCCCCAAGCCGCCT +
Preference number: 5 (lower is better)
Translates to: ALFGETLLRPPLPRGAVRLITIC*QVPKPP
Trigger: AGGCGGCTTGGGGACCTGCAAGCAGATAGTGATGAG...TCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCCTCATCACTATCTGCTaGCAGGTCCCCAAGCCGCCT +
Preference number: 5 (lower is better)
Translates to: KPRCFPCRSAVRWGQWCPLITIC*QVPKPP
Trigger: AGGCGGCTTGGGGACCTGCAAGCAGATAGTGATGAG...GGGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCTGCTGCAGTGCCCGTaGACTCTCATCACTATCTGC +
Preference number: 5 (lower is better)
Translates to: SLERLCFAHLCRVELSDALLQCP*TLITIC
Trigger: GCAGATAGTGATGAGAGTCAACGGGCACTGCAGCAG...GGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp ACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACACTCAGCTGTGAGCCTTaGGCACTTCTTCTTGAGCTG +
Preference number: 5 (lower is better)
Translates to: TSAAWSCQTPTAWKVPLTLSCEP*ALLLEL
Trigger: CAGCTCAAGAAGAAGTGCCAAAGGCTCACAGCTGAG...TGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCTCAGCTGTGAGCCTTaGGCACTTCTTCTTGAGCTG +
Preference number: 5 (lower is better)
Translates to: CFAHLCRVELSDAHSLESLSCEP*ALLLEL
Trigger: CAGCTCAAGAAGAAGTGCCAAAGGCTCACAGCTGAG...ACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCGTCTTTTTCCTCCATTaGCTGCTTCAAGCTGAAAGC +
Preference number: 5 (lower is better)
Translates to: RPPLPRGAVRRPQPGKSPVFFLH*LLQAES
Trigger: GCTTTCAGCTTGAAGCAGCAAATGGAGGAAAAAGAC...GGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACTCCTCTTCCTGGTCCTaGACCTTGGCCTCCAAGTCC +
Preference number: 5 (lower is better)
Translates to: LSLERLCFAHLCRVELSDSSSWS*TLASKS
Trigger: GGACTTGGAGGCCAAGGTCAAGGACCAGGAAGAGGA...GTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGATCTCCAGACGCAGCTaGGCCTGCTCCAGCATCTGT +
Preference number: 5 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQISRRS*ACSSIC
Trigger: ACAGATGCTGGAGCAGGCCAAGCTGCGTCTGGAGAT...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGCGACTCTCCATCTCCTaGGAATGGGTCTGTCTCATT +
Preference number: 5 (lower is better)
Translates to: RLCFAHLCRVELSDAHSLRLSIS*EWVCLI
Trigger: AATGAGACAGACCCATTCCAAGGAGATGGAGAGTCG...CAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACCGACTCTCCATCTCCTaGGAATGGGTCTGTCTCATT +
Preference number: 5 (lower is better)
Translates to: HLCRVELSDAHSLESPPDRLSIS*EWVCLI
Trigger: AATGAGACAGACCCATTCCAAGGAGATGGAGAGTCG...GTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCTCTGAGCGTGGAGAGCTaGCTCTCCAGCTCCCGTTTC +
Preference number: 5 (lower is better)
Translates to: AMAEGKGDGKQVQHQVLPLSVES*LSSSRF
Trigger: GAAACGGGAGCTGGAGAGCAAGCTCTCCACGCTCAG...AGGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGTCTGCCAGCAGCGCTTaGGTGCGCTTCAGGTCTTTC +
Preference number: 5 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQSASSA*VRFRSF
Trigger: GAAAGACCTGAAGCGCACCAAAGCGCTGCTGGCAGA...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCTCTGCCAGCAGCGCTTaGGTGCGCTTCAGGTCTTTC +
Preference number: 5 (lower is better)
Translates to: KPRCFPCRSAVRWGQWCPSASSA*VRFRSF
Trigger: GAAAGACCTGAAGCGCACCAAAGCGCTGCTGGCAGA...GGGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTTGGGCAATCTCCCTCTaGCTCGGGGCATTGTTCTTT +
Preference number: 5 (lower is better)
Translates to: CFAHLCRVELSDAHSLESWAISL*LGALFF
Trigger: AAAGAACAATGCCCCGAGCAAGAGGGAGATTGCCCA...ACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAGCGCTGTCTTGGCTTaGGCGATGTCATCAATCTGC +
Preference number: 5 (lower is better)
Translates to: LCRVELSDAHSLESPPDRSAVLA*AMSSIC
Trigger: GCAGATTGATGACATCGCCAAAGCCAAGACAGCGCT...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp ACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAAGCGCTGTCTTGGCTTaGGCGATGTCATCAATCTGC +
Preference number: 5 (lower is better)
Translates to: TSAAWSCQTPTAWKVPLTSAVLA*AMSSIC
Trigger: GCAGATTGATGACATCGCCAAAGCCAAGACAGCGCT...TGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCGCTGTCTTGGCTTaGGCGATGTCATCAATCTGC +
Preference number: 5 (lower is better)
Translates to: LERLCFAHLCRVELSDAHSAVLA*AMSSIC
Trigger: GCAGATTGATGACATCGCCAAAGCCAAGACAGCGCT...GTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTAGCGCTGTCTTGGCTTaGGCGATGTCATCAATCTGC +
Preference number: 5 (lower is better)
Translates to: CFAHLCRVELSDAHSLESSAVLA*AMSSIC
Trigger: GCAGATTGATGACATCGCCAAAGCCAAGACAGCGCT...ACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCTCCTCCAGCGCTGTCTaGGCTTTGGCGATGTCATCA +
Preference number: 5 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRSSSAV*ALAMSS
Trigger: TGATGACATCGCCAAAGCCAAGACAGCGCTGGAGGA...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAATCCTCCAGCGCTGTCTaGGCTTTGGCGATGTCATCA +
Preference number: 5 (lower is better)
Translates to: SAAWSCQTPTAWKVPLTESSSAV*ALAMSS
Trigger: TGATGACATCGCCAAAGCCAAGACAGCGCTGGAGGA...TTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGCTCTTCCAGCCGGTTTaGAATCTCGTTTTTCTCACG +
Preference number: 5 (lower is better)
Translates to: PTSAAWSCQTPTAWKVPLLFQPV*NLVFLT
Trigger: CGTGAGAAAAACGAGATTCAAAACCGGCTGGAAGAG...CAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAATGGGCCACAGCTGCCTaGTGCTTCTTCATCAGCTCA +
Preference number: 5 (lower is better)
Translates to: SAAWSCQTPTAWKVPLTEWATAA*CFFISS
Trigger: TGAGCTGATGAAGAAGCACAAGGCAGCTGTGGCCCA...TTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCATGGGCCACAGCTGCCTaGTGCTTCTTCATCAGCTCA +
Preference number: 5 (lower is better)
Translates to: FGETLLRPPLPRGAVRRPWATAA*CFFISS
Trigger: TGAGCTGATGAAGAAGCACAAGGCAGCTGTGGCCCA...TGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGAAGTGAAGATGGAGGGGAGATTCCCAAGGCATCCCACAGGCCCCAGCTGCAGCTGCTGACGAGGGACTaGTCCACCATGGACTGCTCC +
Preference number: 5 (lower is better)
Translates to: RSEDGGEIPKASHRPQLQLLTRD*STMDCS
Trigger: GGAGCAGTCCATGGTGGACAAGTCCCTCGTCAGCAG...CTGCAGCTGGGGCCTGTGGGATGCCTTGGGAATCTCCCCTCCATCTTCACTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp ACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACATTCTCCATGGTTTCTTaGAGCCGACTGGCCAGGTTC +
Preference number: 5 (lower is better)
Translates to: TSAAWSCQTPTAWKVPLTFSMVS*SRLARF
Trigger: GAACCTGGCCAGTCGGCTCAAAGAAACCATGGAGAA...TGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTTTCTCCATGGTTTCTTaGAGCCGACTGGCCAGGTTC +
Preference number: 5 (lower is better)
Translates to: CFAHLCRVELSDAHSLESFSMVS*SRLARF
Trigger: GAACCTGGCCAGTCGGCTCAAAGAAACCATGGAGAA...ACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTCTGGAGAAGTGAAGATGGAGGGGAGATTCCCAAGGCATCCCACAGGCCCCAGTTTGACAACCAGGACTaGACCCCGTCGACCCGGTCC +
Preference number: 5 (lower is better)
Translates to: LWRSEDGGEIPKASHRPQFDNQD*TPSTRS
Trigger: GGACCGGGTCGACGGGGTCAAGTCCTGGTTGTCAAA...CTGGGGCCTGTGGGATGCCTTGGGAATCTCCCCTCCATCTTCACTTCTCCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCGCCTTAGAAGGTCCCTaGTTCTTTGACAACCAGGAC +
Preference number: 5 (lower is better)
Translates to: ASPTSAAWSCQTPTAWKVALEGP*FFDNQD
Trigger: GTCCTGGTTGTCAAAGAACAAGGGACCTTCTAAGGC...GACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCTGCTTCAGCAGCTTCTTaGGTAGCTCCAGCAGCCCCC +
Preference number: 5 (lower is better)
Translates to: AMAEGKGDGKQVQHQVLPASAAS*VAPAAP
Trigger: GGGGGCTGCTGGAGCTACCAAAGAAGCTGCTGAAGC...AGGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
CDS-3UTR CAA 90 bp AAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCGCTTCAGCAGCTTCTTaGGTAGCTCCAGCAGCCCCC +
Preference number: 5 (lower is better)
Translates to: KAKVFSMQIGSQVGAVVPASAAS*VAPAAP
Trigger: GGGGGCTGCTGGAGCTACCAAAGAAGCTGCTGAAGC...GGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS TCA 90 bp CGGCGCGCTGGTCCCGTTCCTCAGTCAGCTTCTCCATGGTTTCTTTaGGCCGACTGGCCAGGTTCTCCAGGCGCTTCACTTGGGTCTTTT +
Preference number: 5 (lower is better)
Translates to: RRAGPVPQSASPWFL*ADWPGSPGASLGSF
Trigger: AAAAGACCCAAGTGAAGCGCCTGGAGAACCTGGCCAGTCGGCTCAAAGAAACCATGGAGAAGCTGACTGAGGAACGGGACCAGCGCGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS GCA 90 bp GGGGAGATGGCCAGCACCTTCATGGCAGCCTGGAGCTTACTGAACTaGTGTGCAGCCTTCTGCTTCTCCTCAGGCTTGGACAGTGGCACA +
Preference number: 5 (lower is better)
Translates to: GEMASTFMAAWSLLN*CAAFCFSSGLDSGT
Trigger: TGTGCCACTGTCCAAGCCTGAGGAGAAGCAGAAGGCTGCACAGCAGTTCAGTAAGCTCCAGGCTGCCATGAAGGTGCTGGCCATCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS GCA 90 bp CTCTCCCCCTGCATCATCATCATCCACCTCCCCGTTGATCTCGGCTaGCCGAATGAGCCGGGCTTCCATCACTTCCATCTCCATCACCTC +
Preference number: 5 (lower is better)
Translates to: LSPCIIIIHLPVDLG*PNEPGFHHFHLHHL
Trigger: GAGGTGATGGAGATGGAAGTGATGGAAGCCCGGCTCATTCGGGCAGCCGAGATCAACGGGGAGGTGGATGATGATGATGCAGGGGGAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CCA 90 bp AGCCAGCCAGCCACGTTGTACTCCACCCAGTTGGTACCGTGGCTGTaGCCCAGGAGAAAGTGCCGAGGTTTGCTACTTCGCAGAAGAGGA +
Preference number: 5 (lower is better)
Translates to: SQPATLYSTQLVPWL*PRRKCRGLLLRRRG
Trigger: TCCTCTTCTGCGAAGTAGCAAACCTCGGCACTTTCTCCTGGGCCACAGCCACGGTACCAACTGGGTGGAGTACAACGTGGCTGGCTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CCA 90 bp AGTCCTGCAGAAGCCGGGGTGCATTCTGGGTGGCTGGGTTCTGCTTaGTGTAATTCAGCCAGCCAGCCACGTTGTACTCCACCCAGTTGG +
Preference number: 5 (lower is better)
Translates to: SPAEAGVHSGWLGSA*CNSASQPRCTPPSW
Trigger: CCAACTGGGTGGAGTACAACGTGGCTGGCTGGCTGAATTACACCAAGCAGAACCCAGCCACCCAGAATGCACCCCGGCTTCTGCAGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CCA 90 bp GCTGTCCACAGGATCATGCTCATCATCCGATGGGTCAGGGGCGAGTaGCTTCCAGTGGCTGGTTGGGCTGGAACTCTTCAAGCTGCCATC +
Preference number: 5 (lower is better)
Translates to: AVHRIMLIIRWVRGE*LPVAGWAGTLQAAI
Trigger: GATGGCAGCTTGAAGAGTTCCAGCCCAACCAGCCACTGGAAGCCACTCGCCCCTGACCCATCGGATGATGAGCATGATCCTGTGGACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CCA 90 bp CACAGGCTTGTAGCTCAAGACCTCGTTAATGGCAGCCTCCAGGTCTaGATCAAGGTAGGAGTGGCGACTGACAGGTCGGACGCTGGAGCC +
Preference number: 5 (lower is better)
Translates to: HRLVAQDLVNGSLQV*IKVGVATDRSDAGA
Trigger: GGCTCCAGCGTCCGACCTGTCAGTCGCCACTCCTACCTTGATCCAGACCTGGAGGCTGCCATTAACGAGGTCTTGAGCTACAAGCCTGTG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS CCA 90 bp CCTTCTTTGACCGTCTTGGAGTTTGCCCCGCTTCCTCAACGTCTGTaGTTGGGCCCTTTTTCACACTGGAGCGGCTATGGCCGGAGACGG +
Preference number: 5 (lower is better)
Translates to: PSLTVLEFAPLPQRL*LGPFSHWSGYGRRR
Trigger: CCGTCTCCGGCCATAGCCGCTCCAGTGTGAAAAAGGGCCCAACCACAGACGTTGAGGAAGCGGGGCAAACTCCAAGACGGTCAAAGAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS-3UTR CAA 90 bp CTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACCTGCCTTCTTCACCCTaGAGGTCATCACTGGAGCTG +
Preference number: 5 (lower is better)
Translates to: LSLERLCFAHLCRVELSDLPSSP*RSSLEL
Trigger: CAGCTCCAGTGATGACCTCAAGGGTGAAGAAGGCAG...GTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CAA 90 bp AAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCCTGCCTTCTTCACCCTaGAGGTCATCACTGGAGCTG +
Preference number: 5 (lower is better)
Translates to: KPRCFPCRSAVRWGQWCPLPSSP*RSSLEL
Trigger: CAGCTCCAGTGATGACCTCAAGGGTGAAGAAGGCAG...GGGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CAA 90 bp TTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACCTCATCCCGGCTCCGTaGAGAGAAGGAAAAACGTTT +
Preference number: 5 (lower is better)
Translates to: LERLCFAHLCRVELSDAHLIPAP*REGKTF
Trigger: AAACGTTTTTCCTTCTCTCAACGGAGCCGGGATGAG...GTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CAA 90 bp AGCAGGAGGCTGAGATGGAGGTCCACCACCGGCTCCATGGAATGCCAGGCCACCCTCATCCCGGCTCCGTaGAGAGAAGGAAAAACGTTT +
Preference number: 5 (lower is better)
Translates to: SRRLRWRSTTGSMECQATLIPAP*REGKTF
Trigger: AAACGTTTTTCCTTCTCTCAACGGAGCCGGGATGAG...GGTGGCCTGGCATTCCATGGAGCCGGTGGTGGACCTCCATCTCAGCCTCCTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CAA 90 bp TGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCTCATCCCGGCTCCGTaGAGAGAAGGAAAAACGTTT +
Preference number: 5 (lower is better)
Translates to: CFAHLCRVELSDAHSLESLIPAP*REGKTF
Trigger: AAACGTTTTTCCTTCTCTCAACGGAGCCGGGATGAG...ACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CAA 90 bp CAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGAGTGCTCTGAGGGGGTaGAGGTCTCCGAGGCACTCT +
Preference number: 5 (lower is better)
Translates to: QKAKVFSMQIGSQVGAVVSALRG*RSPRHS
Trigger: AGAGTGCCTCGGAGACCTCAACCCCCTCAGAGCACT...CACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CAA 90 bp CTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACAGGACGCTAGACTCGTaGAGGTATACCAGTGAGGCC +
Preference number: 5 (lower is better)
Translates to: LSLERLCFAHLCRVELSDRTLDS*RYTSEA
Trigger: GGCCTCACTGGTATACCTCAACGAGTCTAGCGTCCT...GTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCAGCCACCTGGCCAGCTaGGTCAAAGTCCAGGGAGAG +
Preference number: 5 (lower is better)
Translates to: RKPRCFPCRSAVRWGQWCSHLAS*VKVQGE
Trigger: CTCTCCCTGGACTTTGACCAAGCTGGCCAGGTGGCT...GCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCTGCTTCTCCTCAGGCTaGGACAGTGGCACAATTCCA +
Preference number: 5 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRCFSSG*DSGTIP
Trigger: TGGAATTGTGCCACTGTCCAAGCCTGAGGAGAAGCA...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCTGCTTCTCCTCAGGCTaGGACAGTGGCACAATTCCA +
Preference number: 5 (lower is better)
Translates to: SLERLCFAHLCRVELSDACFSSG*DSGTIP
Trigger: TGGAATTGTGCCACTGTCCAAGCCTGAGGAGAAGCA...GGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp ACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACGCAACTGCCAGCTCTTaGGTAGCTCCAGCAGCCCCC +
Preference number: 5 (lower is better)
Translates to: TKQWQKGRGMANRSSTRYATASS*VAPAAP
Trigger: GGGGGCTGCTGGAGCTACCAAAGAGCTGGCAGTTGC...GTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000000645.13
CDS-3UTR CAA 90 bp GCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCCCTTTTAGCTGGTGTTaGAAGATAGCCGAGGACAGC +
Preference number: 5 (lower is better)
Translates to: AAWSCQTPTAWKVPLTESPFSWC*KIAEDS
Trigger: GCTGTCCTCGGCTATCTTCAAACACCAGCTAAAAGG...GCTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGCAGGAGGCTGAGATGGAGGTCCACCACCGGCTCCATGGAATGCCAGGCCACCCCTTTTAGCTGGTGTTaGAAGATAGCCGAGGACAGC +
Preference number: 5 (lower is better)
Translates to: SRRLRWRSTTGSMECQATPFSWC*KIAEDS
Trigger: GCTGTCCTCGGCTATCTTCAAACACCAGCTAAAAGG...GGTGGCCTGGCATTCCATGGAGCCGGTGGTGGACCTCCATCTCAGCCTCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCTTTTAGCTGGTGTTaGAAGATAGCCGAGGACAGC +
Preference number: 5 (lower is better)
Translates to: CFAHLCRVELSDAHSLESPFSWC*KIAEDS
Trigger: GCTGTCCTCGGCTATCTTCAAACACCAGCTAAAAGG...ACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCCCTTTTAGCTGGTGTTaGAAGATAGCCGAGGACAGC +
Preference number: 5 (lower is better)
Translates to: LWRDSASPTSAAWSCQTPPFSWC*KIAEDS
Trigger: GCTGTCCTCGGCTATCTTCAAACACCAGCTAAAAGG...GGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACCCTTTTAGCTGGTGTTaGAAGATAGCCGAGGACAGC +
Preference number: 5 (lower is better)
Translates to: LERLCFAHLCRVELSDAHPFSWC*KIAEDS
Trigger: GCTGTCCTCGGCTATCTTCAAACACCAGCTAAAAGG...GTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCGAGTGCTGGCTGGACTaGAGAGCCCTGTTTACCAGG +
Preference number: 5 (lower is better)
Translates to: SNGRREGGWQTGPAPGTAECWLD*RALFTR
Trigger: CCTGGTAAACAGGGCTCTCAAGTCCAGCCAGCACTC...GGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCTGAGTGCTGGCTGGACTaGAGAGCCCTGTTTACCAGG +
Preference number: 5 (lower is better)
Translates to: AMAEGKGDGKQVQHQVLPECWLD*RALFTR
Trigger: CCTGGTAAACAGGGCTCTCAAGTCCAGCCAGCACTC...AGGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTCCCCACCCTGCCTCCAAAGAACCAGGGCCCCGGCTCTGCTAACCGCTGTCCCTCTATGTTATCCTCCTaGTATCTCTCCAACTCCTGG +
Preference number: 5 (lower is better)
Translates to: LPTLPPKNQGPGSANRCPSMLSS*YLSNSW
Trigger: CCAGGAGTTGGAGAGATACAAGGAGGATAACATAGA...GGGACAGCGGTTAGCAGAGCCGGGGCCCTGGTTCTTTGGAGGCAGGGTGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCTTGTACTCCACCCAGTaGGTACCGTGGCTGTGGCCC +
Preference number: 5 (lower is better)
Translates to: RKPRCFPCRSAVRWGQWCLYSTQ*VPWLWP
Trigger: GGGCCACAGCCACGGTACCAACTGGGTGGAGTACAA...GCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGGTGGTCTGGGTAACCTaGGCGGTACATGCGCATCGC +
Preference number: 5 (lower is better)
Translates to: QKAKVFSMQIGSQVGAVVVVWVT*AVHAHR
Trigger: GCGATGCGCATGTACCGCCAAGGTTACCCAGACCAC...CACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCTTACGACCATGTTTCTaGGTCAGGTGTGGAGCCAGG +
Preference number: 5 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRLRPCF*VRCGAR
Trigger: CCTGGCTCCACACCTGACCAAGAAACATGGTCGTAA...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCATTACGACCATGTTTCTaGGTCAGGTGTGGAGCCAGG +
Preference number: 5 (lower is better)
Translates to: FGETLLRPPLPRGAVRRPLRPCF*VRCGAR
Trigger: CCTGGCTCCACACCTGACCAAGAAACATGGTCGTAA...TGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCATGGATCTTTCTCTTCTaGAAGTGCTGGCGGGCAAGG +
Preference number: 5 (lower is better)
Translates to: FGETLLRPPLPRGAVRRPWIFLF*KCWRAR
Trigger: CCTTGCCCGCCAGCACTTCAAGAAGAGAAAGATCCA...TGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGACCCCCTTGTTCTTCTaGATGTTCTTCTGCACACAG +
Preference number: 5 (lower is better)
Translates to: RLCFAHLCRVELSDAHSLTPLFF*MFFCTQ
Trigger: CTGTGTGCAGAAGAACATCAAGAAGAACAAGGGGGT...CAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCACCCCCTTGTTCTTCTaGATGTTCTTCTGCACACAG +
Preference number: 5 (lower is better)
Translates to: ASPTSAAWSCQTPTAWKVTPLFF*MFFCTQ
Trigger: CTGTGTGCAGAAGAACATCAAGAAGAACAAGGGGGT...GACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACTGGATCTCCTCGTCTTaGTTTCGGATCTGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: LERLCFAHLCRVELSDAHWISSS*FRICSS
Trigger: AGAGGAGCAGATCCGAAACAAAGACGAGGAGATCCA...GTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGCAGGAGGCTGAGATGGAGGTCCACCACCGGCTCCATGGAATGCCAGGCCACCTGGATCTCCTCGTCTTaGTTTCGGATCTGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: SRRLRWRSTTGSMECQATWISSS*FRICSS
Trigger: AGAGGAGCAGATCCGAAACAAAGACGAGGAGATCCA...GGTGGCCTGGCATTCCATGGAGCCGGTGGTGGACCTCCATCTCAGCCTCCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCTGGATCTCCTCGTCTTaGTTTCGGATCTGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: AAWSCQTPTAWKVPLTESWISSS*FRICSS
Trigger: AGAGGAGCAGATCCGAAACAAAGACGAGGAGATCCA...GCTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp ACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACATGGATCTCCTCGTCTTaGTTTCGGATCTGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: TSAAWSCQTPTAWKVPLTWISSS*FRICSS
Trigger: AGAGGAGCAGATCCGAAACAAAGACGAGGAGATCCA...TGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCTCCACCTTCTCAAGCTaGCTGCGCAGCTGCTGGATC +
Preference number: 5 (lower is better)
Translates to: KAKVFSMQIGSQVGAVVPSTFSS*LRSCWI
Trigger: GATCCAGCAGCTGCGCAGCAAGCTTGAGAAGGTGGA...GGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGTGCTGGAGCCGCTTCTaGGTGAAGTCCACCTCCCGA +
Preference number: 5 (lower is better)
Translates to: QKAKVFSMQIGSQVGAVVCWSRF*VKSTSR
Trigger: TCGGGAGGTGGACTTCACCAAGAAGCGGCTCCAGCA...CACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCTCATCACTATCTGCTaGCAGGTCCCCAAGCCGCCT +
Preference number: 5 (lower is better)
Translates to: KAKVFSMQIGSQVGAVVPLITIC*QVPKPP
Trigger: AGGCGGCTTGGGGACCTGCAAGCAGATAGTGATGAG...GGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGCTGCTGCAGTGCCCGTaGACTCTCATCACTATCTGC +
Preference number: 5 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQLLQCP*TLITIC
Trigger: GCAGATAGTGATGAGAGTCAACGGGCACTGCAGCAG...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCCTGCTGCAGTGCCCGTaGACTCTCATCACTATCTGC +
Preference number: 5 (lower is better)
Translates to: KPRCFPCRSAVRWGQWCPLLQCP*TLITIC
Trigger: GCAGATAGTGATGAGAGTCAACGGGCACTGCAGCAG...GGGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAACTCAGCTGTGAGCCTTaGGCACTTCTTCTTGAGCTG +
Preference number: 5 (lower is better)
Translates to: SAAWSCQTPTAWKVPLTELSCEP*ALLLEL
Trigger: CAGCTCAAGAAGAAGTGCCAAAGGCTCACAGCTGAG...TTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp ACAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTCCCTCCAGGTGCAGCTaGGTGTCCTGCAGCTCAGCT +
Preference number: 5 (lower is better)
Translates to: TESQGVFHADRQSGGGSGPSRCS*VSCSSA
Trigger: AGCTGAGCTGCAGGACACCAAGCTGCACCTGGAGGG...ACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCTCCTCTTCCTGGTCCTaGACCTTGGCCTCCAAGTCC +
Preference number: 5 (lower is better)
Translates to: KAKVFSMQIGSQVGAVVPSSSWS*TLASKS
Trigger: GGACTTGGAGGCCAAGGTCAAGGACCAGGAAGAGGA...GGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCATCTCCAGACGCAGCTaGGCCTGCTCCAGCATCTGT +
Preference number: 5 (lower is better)
Translates to: SNGRREGGWQTGPAPGTAISRRS*ACSSIC
Trigger: ACAGATGCTGGAGCAGGCCAAGCTGCGTCTGGAGAT...GGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCTGAGCGTGGAGAGCTaGCTCTCCAGCTCCCGTTTC +
Preference number: 5 (lower is better)
Translates to: RKPRCFPCRSAVRWGQWCLSVES*LSSSRF
Trigger: GAAACGGGAGCTGGAGAGCAAGCTCTCCACGCTCAG...GCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGGCAGGCAGAGCTGGAAGCCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTTGGGCAATCTCCCTCTaGCTCGGGGCATTGTTCTTT +
Preference number: 5 (lower is better)
Translates to: RQAELEAAGGCRWKRSALWAISL*LGALFF
Trigger: AAAGAACAATGCCCCGAGCAAGAGGGAGATTGCCCA...AAGAGCTGATCTCTTCCACCTGCACCCACCCGCGGCTTCCAGCTCTGCCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGTGGGCAATCTCCCTCTaGCTCGGGGCATTGTTCTTT +
Preference number: 5 (lower is better)
Translates to: CRVELSDAHSLESPPDRKWAISL*LGALFF
Trigger: AAAGAACAATGCCCCGAGCAAGAGGGAGATTGCCCA...CTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCAGCGCTGTCTTGGCTTaGGCGATGTCATCAATCTGC +
Preference number: 5 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRSAVLA*AMSSIC
Trigger: GCAGATTGATGACATCGCCAAAGCCAAGACAGCGCT...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGTCCTCCAGCGCTGTCTaGGCTTTGGCGATGTCATCA +
Preference number: 5 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQSSSAV*ALAMSS
Trigger: TGATGACATCGCCAAAGCCAAGACAGCGCTGGAGGA...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTCTTCCAGCCGGTTTaGAATCTCGTTTTTCTCACG +
Preference number: 5 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSLFQPV*NLVFLT
Trigger: CGTGAGAAAAACGAGATTCAAAACCGGCTGGAAGAG...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGTGGGCCACAGCTGCCTaGTGCTTCTTCATCAGCTCA +
Preference number: 5 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQWATAA*CFFISS
Trigger: TGAGCTGATGAAGAAGCACAAGGCAGCTGTGGCCCA...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCTGGGCCACAGCTGCCTaGTGCTTCTTCATCAGCTCA +
Preference number: 5 (lower is better)
Translates to: KPRCFPCRSAVRWGQWCPWATAA*CFFISS
Trigger: TGAGCTGATGAAGAAGCACAAGGCAGCTGTGGCCCA...GGGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCTGCTGACGAGGGACTaGTCCACCATGGACTGCTCC +
Preference number: 5 (lower is better)
Translates to: RKPRCFPCRSAVRWGQWCLLTRD*STMDCS
Trigger: GGAGCAGTCCATGGTGGACAAGTCCCTCGTCAGCAG...GCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCTTCTCCATGGTTTCTTaGAGCCGACTGGCCAGGTTC +
Preference number: 5 (lower is better)
Translates to: SLERLCFAHLCRVELSDAFSMVS*SRLARF
Trigger: GAACCTGGCCAGTCGGCTCAAAGAAACCATGGAGAA...GGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCTTCTCCATGGTTTCTTaGAGCCGACTGGCCAGGTTC +
Preference number: 5 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRFSMVS*SRLARF
Trigger: GAACCTGGCCAGTCGGCTCAAAGAAACCATGGAGAA...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGTTCTCCATGGTTTCTTaGAGCCGACTGGCCAGGTTC +
Preference number: 5 (lower is better)
Translates to: CRVELSDAHSLESPPDRKFSMVS*SRLARF
Trigger: GAACCTGGCCAGTCGGCTCAAAGAAACCATGGAGAA...CTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTCTGGAGAAGTGAAGATGGAGGGGAGATTCCCAAGGCATCCCACAGGCCCCAGTCGCTCATCTCCTCCTaGGTGTCACGAAGCTGTCGC +
Preference number: 5 (lower is better)
Translates to: LWRSEDGGEIPKASHRPQSLISS*VSRSCR
Trigger: GCGACAGCTTCGTGACACCAAGGAGGAGATGAGCGA...CTGGGGCCTGTGGGATGCCTTGGGAATCTCCCCTCCATCTTCACTTCTCCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCTCGCTCATCTCCTCCTaGGTGTCACGAAGCTGTCGC +
Preference number: 5 (lower is better)
Translates to: KAKVFSMQIGSQVGAVVPSLISS*VSRSCR
Trigger: GCGACAGCTTCGTGACACCAAGGAGGAGATGAGCGA...GGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAATCCTCAATGGCAGCTaGCAAGTCCCCAATGCGTTT +
Preference number: 5 (lower is better)
Translates to: LCRVELSDAHSLESPPDRILNGS*QVPNAF
Trigger: AAACGCATTGGGGACTTGCAAGCTGCCATTGAGGAT...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp ACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAATCCTCAATGGCAGCTaGCAAGTCCCCAATGCGTTT +
Preference number: 5 (lower is better)
Translates to: TSAAWSCQTPTAWKVPLTILNGS*QVPNAF
Trigger: AAACGCATTGGGGACTTGCAAGCTGCCATTGAGGAT...TGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCATCCTCAATGGCAGCTaGCAAGTCCCCAATGCGTTT +
Preference number: 5 (lower is better)
Translates to: AAWSCQTPTAWKVPLTESILNGS*QVPNAF
Trigger: AAACGCATTGGGGACTTGCAAGCTGCCATTGAGGAT...GCTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAGCCTTAGAAGGTCCCTaGTTCTTTGACAACCAGGAC +
Preference number: 5 (lower is better)
Translates to: LCRVELSDAHSLESPPDRALEGP*FFDNQD
Trigger: GTCCTGGTTGTCAAAGAACAAGGGACCTTCTAAGGC...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCGCCTTAGAAGGTCCCTaGTTCTTTGACAACCAGGAC +
Preference number: 5 (lower is better)
Translates to: AAWSCQTPTAWKVPLTESALEGP*FFDNQD
Trigger: GTCCTGGTTGTCAAAGAACAAGGGACCTTCTAAGGC...GCTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GAGTACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGTCCCGCCGACACCCCTaGAACATGTGCATCACCCGC +
Preference number: 5 (lower is better)
Translates to: EYKAMAEGKGDGKQVQHQSRRHP*NMCITR
Trigger: GCGGGTGATGCACATGTTCAAGGGGTGTCGGCGGGA...CTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGTACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000167856.8
CDS TCA 90 bp GCGCAGCTGCTGGATCTCCTCGTCTTTGTTTCGGATCTGCTCCTCTaGCAGCTGAACTTGGATGAGGGGCCGCACGGTGGTGAAGAGCTT +
Preference number: 5 (lower is better)
Translates to: AQLLDLLVFVSDLLL*QLNLDEGPHGGEEL
Trigger: AAGCTCTTCACCACCGTGCGGCCCCTCATCCAAGTTCAGCTGTCAGAGGAGCAGATCCGAAACAAAGACGAGGAGATCCAGCAGCTGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS TCA 90 bp GCTGTGAGCCTTTGGCACTTCTTCTTGAGCTGCTGCAGTGCCCGTTaGCTCTCATCACTATCTGCTTGCAGGTCCCCAAGCCGCCTCTCC +
Preference number: 5 (lower is better)
Translates to: AVSLWHFFLSCCSAR*LSSLSACRSPSRLS
Trigger: GGAGAGGCGGCTTGGGGACCTGCAAGCAGATAGTGATGAGAGTCAACGGGCACTGCAGCAGCTCAAGAAGAAGTGCCAAAGGCTCACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS GCA 90 bp TTTTCGAACTCCAGGCGTGTCTCCAGCTCCCTGATCTTCGCTTCCTaGCTGCTGACGAGGGACTTGTCCACCATGGACTGCTCCAGGAAC +
Preference number: 5 (lower is better)
Translates to: FSNSRRVSSSLIFAS*LLTRDLSTMDCSRN
Trigger: GTTCCTGGAGCAGTCCATGGTGGACAAGTCCCTCGTCAGCAGGCAGGAAGCGAAGATCAGGGAGCTGGAGACACGCCTGGAGTTCGAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CCA 90 bp GCCTTCTCTATATCATCTTCATCCACATCCAGGATGGCTCCGTCATaGTCCAGCTTCACACGCGCCTTCCCCTCGGGTAGGCTGAGCTCC +
Preference number: 5 (lower is better)
Translates to: AFSISSSSTSRMAPS*SSFTRAFPSGRLSS
Trigger: GGAGCTCAGCCTACCCGAGGGGAAGGCGCGTGTGAAGCTGGACCATGACGGAGCCATCCTGGATGTGGATGAAGATGATATAGAGAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CCA 90 bp GCTTGGTGTAATTCAGCCAGCCAGCCACGTTGTACTCCACCCAGTTaGTACCGTGGCTGTGGCCCAGGAGAAAGTGCCGAGGTTTGCTAC +
Preference number: 5 (lower is better)
Translates to: AWCNSASQPRCTPPS*YRGCGPGESAEVCY
Trigger: GTAGCAAACCTCGGCACTTTCTCCTGGGCCACAGCCACGGTACCAACTGGGTGGAGTACAACGTGGCTGGCTGGCTGAATTACACCAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CCA 90 bp CGCTTCAGGTCTTTCCGTAGCCGCTTCTCTGATTCAAAGTCCCGCTaGTTCACCTGGTCACTGAGCGTGGAGAGCTTGCTCTCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: RFRSFRSRFSDSKSR*FTWSLSVESLLSSS
Trigger: GGAGCTGGAGAGCAAGCTCTCCACGCTCAGTGACCAGGTGAACCAGCGGGACTTTGAATCAGAGAAGCGGCTACGGAAAGACCTGAAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CCA 90 bp AGCCTCTTGTTCTGCTCCTTCTCACGGTTCTCAGCTGCGGCGCGCTaGTCCCGTTCCTCAGTCAGCTTCTCCATGGTTTCTTTGAGCCGA +
Preference number: 5 (lower is better)
Translates to: SLLFCSFSRFSAAAR*SRSSVSFSMVSLSR
Trigger: TCGGCTCAAAGAAACCATGGAGAAGCTGACTGAGGAACGGGACCAGCGCGCCGCAGCTGAGAACCGTGAGAAGGAGCAGAACAAGAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CCA 90 bp TCCAAGCTGCAGCCCAGCAGGTATGCTGCCTTCTGGGCCCATTCGTaGCGGGCAAACTGCTTTCGTCCAGCTTCAGCAGCTTCTTTGGTA +
Preference number: 5 (lower is better)
Translates to: SKLQPSRYAAFWAHS*RANCFRPASAASLV
Trigger: TACCAAAGAAGCTGCTGAAGCTGGACGAAAGCAGTTTGCCCGCCACGAATGGGCCCAGAAGGCAGCATACCTGCTGGGCTGCAGCTTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS CCA 90 bp TCCTCAACGTCTGTGGTTGGGCCCTTTTTCACACTGGAGCGGCTATaGCCGGAGACGGTGGAGCCACTGGATGACGAGGACTCAGATTCA +
Preference number: 5 (lower is better)
Translates to: SSTSVVGPFFTLERL*PETVEPLDDEDSDS
Trigger: TGAATCTGAGTCCTCGTCATCCAGTGGCTCCACCGTCTCCGGCCATAGCCGCTCCAGTGTGAAAAAGGGCCCAACCACAGACGTTGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS-3UTR CAA 90 bp CTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCTTCCGCCCGCCATCTTaGTCCTTATCTTTCTTCATG +
Preference number: 5 (lower is better)
Translates to: LWRDSASPTSAAWSCQTPFRPPS*SLSFFM
Trigger: CATGAAGAAAGATAAGGACAAAGATGGCGGGCGGAA...GGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CAA 90 bp AAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCTGCCTTCTTCACCCTaGAGGTCATCACTGGAGCTG +
Preference number: 5 (lower is better)
Translates to: KAKVFSMQIGSQVGAVVPLPSSP*RSSLEL
Trigger: CAGCTCCAGTGATGACCTCAAGGGTGAAGAAGGCAG...GGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CAA 90 bp CCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTAAATAACTGCTCATTGCACCCCGATCCAGCATGGTaGTGCGCCGCAGTGAGAAGC +
Preference number: 5 (lower is better)
Translates to: PRVGAGGRDQLLNNCSLHPDPAW*CAAVRS
Trigger: GCTTCTCACTGCGGCGCACAACCATGCTGGATCGGG...GTGCAATGAGCAGTTATTTAAGAGCTGATCTCTTCCACCTGCACCCACCCGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
CDS-3UTR CAA 90 bp GCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCTAGGACGCTAGACTCGTaGAGGTATACCAGTGAGGCC +
Preference number: 5 (lower is better)
Translates to: AMAEGKGDGKQVQHQVLPRTLDS*RYTSEA
Trigger: GGCCTCACTGGTATACCTCAACGAGTCTAGCGTCCT...AGGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTCTGGAGAAGTGAAGATGGAGGGGAGATTCCCAAGGCATCCCACAGGCCCCAGAGGACGCTAGACTCGTaGAGGTATACCAGTGAGGCC +
Preference number: 5 (lower is better)
Translates to: LWRSEDGGEIPKASHRPQRTLDS*RYTSEA
Trigger: GGCCTCACTGGTATACCTCAACGAGTCTAGCGTCCT...CTGGGGCCTGTGGGATGCCTTGGGAATCTCCCCTCCATCTTCACTTCTCCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCAGGACGCTAGACTCGTaGAGGTATACCAGTGAGGCC +
Preference number: 5 (lower is better)
Translates to: KAKVFSMQIGSQVGAVVPRTLDS*RYTSEA
Trigger: GGCCTCACTGGTATACCTCAACGAGTCTAGCGTCCT...GGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACTGCTTCTCCTCAGGCTaGGACAGTGGCACAATTCCA +
Preference number: 5 (lower is better)
Translates to: LSLERLCFAHLCRVELSDCFSSG*DSGTIP
Trigger: TGGAATTGTGCCACTGTCCAAGCCTGAGGAGAAGCA...GTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGTGCTTCTCCTCAGGCTaGGACAGTGGCACAATTCCA +
Preference number: 5 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQCFSSG*DSGTIP
Trigger: TGGAATTGTGCCACTGTCCAAGCCTGAGGAGAAGCA...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGTCTATGTTATCCTCCTaGTATCTCTCCAACTCCTGG +
Preference number: 5 (lower is better)
Translates to: RLCFAHLCRVELSDAHSLSMLSS*YLSNSW
Trigger: CCAGGAGTTGGAGAGATACAAGGAGGATAACATAGA...CAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GAGTACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGTTGTACTCCACCCAGTaGGTACCGTGGCTGTGGCCC +
Preference number: 5 (lower is better)
Translates to: EYKAMAEGKGDGKQVQHQLYSTQ*VPWLWP
Trigger: GGGCCACAGCCACGGTACCAACTGGGTGGAGTACAA...CTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGTACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGAGCCAGCCAGCCACGTaGTACTCCACCCAGTTGGTA +
Preference number: 5 (lower is better)
Translates to: QKAKVFSMQIGSQVGAVVSQPAT*YSTQLV
Trigger: TACCAACTGGGTGGAGTACAACGTGGCTGGCTGGCT...CACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCAGCCAGCCAGCCACGTaGTACTCCACCCAGTTGGTA +
Preference number: 5 (lower is better)
Translates to: RKPRCFPCRSAVRWGQWCSQPAT*YSTQLV
Trigger: TACCAACTGGGTGGAGTACAACGTGGCTGGCTGGCT...GCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GAGTACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTGGTCTGGGTAACCTaGGCGGTACATGCGCATCGC +
Preference number: 5 (lower is better)
Translates to: EYKAMAEGKGDGKQVQHQVVWVT*AVHAHR
Trigger: GCGATGCGCATGTACCGCCAAGGTTACCCAGACCAC...CTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGTACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCTTACGACCATGTTTCTaGGTCAGGTGTGGAGCCAGG +
Preference number: 5 (lower is better)
Translates to: KPRCFPCRSAVRWGQWCPLRPCF*VRCGAR
Trigger: CCTGGCTCCACACCTGACCAAGAAACATGGTCGTAA...GGGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGTGGATCTTTCTCTTCTaGAAGTGCTGGCGGGCAAGG +
Preference number: 5 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQWIFLF*KCWRAR
Trigger: CCTTGCCCGCCAGCACTTCAAGAAGAGAAAGATCCA...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp ACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAACCCCCTTGTTCTTCTaGATGTTCTTCTGCACACAG +
Preference number: 5 (lower is better)
Translates to: TSAAWSCQTPTAWKVPLTTPLFF*MFFCTQ
Trigger: CTGTGTGCAGAAGAACATCAAGAAGAACAAGGGGGT...TGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACACCCCCTTGTTCTTCTaGATGTTCTTCTGCACACAG +
Preference number: 5 (lower is better)
Translates to: LERLCFAHLCRVELSDAHTPLFF*MFFCTQ
Trigger: CTGTGTGCAGAAGAACATCAAGAAGAACAAGGGGGT...GTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCCAGTCCTTCACCCCCTaGTTCTTCTTGATGTTCTTC +
Preference number: 5 (lower is better)
Translates to: AAWSCQTPTAWKVPLTESQSFTP*FFLMFF
Trigger: GAAGAACATCAAGAAGAACAAGGGGGTGAAGGACTG...GCTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACCAGTCCTTCACCCCCTaGTTCTTCTTGATGTTCTTC +
Preference number: 5 (lower is better)
Translates to: LERLCFAHLCRVELSDAHQSFTP*FFLMFF
Trigger: GAAGAACATCAAGAAGAACAAGGGGGTGAAGGACTG...GTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCCAGTCCTTCACCCCCTaGTTCTTCTTGATGTTCTTC +
Preference number: 5 (lower is better)
Translates to: LWRDSASPTSAAWSCQTPQSFTP*FFLMFF
Trigger: GAAGAACATCAAGAAGAACAAGGGGGTGAAGGACTG...GGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCATGGATCTCCTCGTCTTaGTTTCGGATCTGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: FGETLLRPPLPRGAVRRPWISSS*FRICSS
Trigger: AGAGGAGCAGATCCGAAACAAAGACGAGGAGATCCA...TGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCTGGATCTCCTCGTCTTaGTTTCGGATCTGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRWISSS*FRICSS
Trigger: AGAGGAGCAGATCCGAAACAAAGACGAGGAGATCCA...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GAGTACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGCGGACTCTCCCGTGTaGCGTTCATCAGTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: EYKAMAEGKGDGKQVQHQADSPV*RSSVSS
Trigger: GGAGCTGACTGATGAACGCAACACGGGAGAGTCCGC...CTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGTACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp ACAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTTGCTGGAGCCGCTTCTaGGTGAAGTCCACCTCCCGA +
Preference number: 5 (lower is better)
Translates to: TESQGVFHADRQSGGGSGCWSRF*VKSTSR
Trigger: TCGGGAGGTGGACTTCACCAAGAAGCGGCTCCAGCA...ACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GAGTACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGTGCTGGAGCCGCTTCTaGGTGAAGTCCACCTCCCGA +
Preference number: 5 (lower is better)
Translates to: EYKAMAEGKGDGKQVQHQCWSRF*VKSTSR
Trigger: TCGGGAGGTGGACTTCACCAAGAAGCGGCTCCAGCA...CTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGTACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACTCAGCTGTGAGCCTTaGGCACTTCTTCTTGAGCTG +
Preference number: 5 (lower is better)
Translates to: ALFGETLLRPPLPRGAVRLSCEP*ALLLEL
Trigger: CAGCTCAAGAAGAAGTGCCAAAGGCTCACAGCTGAG...TCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCCTCAGCTGTGAGCCTTaGGCACTTCTTCTTGAGCTG +
Preference number: 5 (lower is better)
Translates to: KPRCFPCRSAVRWGQWCPLSCEP*ALLLEL
Trigger: CAGCTCAAGAAGAAGTGCCAAAGGCTCACAGCTGAG...GGGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCGTCTTTTTCCTCCATTaGCTGCTTCAAGCTGAAAGC +
Preference number: 5 (lower is better)
Translates to: ASPTSAAWSCQTPTAWKVVFFLH*LLQAES
Trigger: GCTTTCAGCTTGAAGCAGCAAATGGAGGAAAAAGAC...GACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTCCCCACCCTGCCTCCAAAGAACCAGGGCCCCGGCTCTGCTAACCGCTGTCCCCTCATCCTTAGACTCTaGAGAAGAAATGTCCTGAAG +
Preference number: 5 (lower is better)
Translates to: LPTLPPKNQGPGSANRCPLILRL*RRNVLK
Trigger: CTTCAGGACATTTCTTCTCAAGAGTCTAAGGATGAG...GGGACAGCGGTTAGCAGAGCCGGGGCCCTGGTTCTTTGGAGGCAGGGTGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp ACAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTTCCCGGAGCTGCTTCTaGACCTTGGCCAGAGAAGCC +
Preference number: 5 (lower is better)
Translates to: TESQGVFHADRQSGGGSGSRSCF*TLAREA
Trigger: GGCTTCTCTGGCCAAGGTCAAGAAGCAGCTCCGGGA...ACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGTCCTCTTCCTGGTCCTaGACCTTGGCCTCCAAGTCC +
Preference number: 5 (lower is better)
Translates to: QKAKVFSMQIGSQVGAVVSSSWS*TLASKS
Trigger: GGACTTGGAGGCCAAGGTCAAGGACCAGGAAGAGGA...CACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCTCCTCTTCCTGGTCCTaGACCTTGGCCTCCAAGTCC +
Preference number: 5 (lower is better)
Translates to: RKPRCFPCRSAVRWGQWCSSSWS*TLASKS
Trigger: GGACTTGGAGGCCAAGGTCAAGGACCAGGAAGAGGA...GCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCGACTCTCCATCTCCTaGGAATGGGTCTGTCTCATT +
Preference number: 5 (lower is better)
Translates to: CRVELSDAHSLESPPDRKRLSIS*EWVCLI
Trigger: AATGAGACAGACCCATTCCAAGGAGATGGAGAGTCG...CTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGTCTGCCAGCAGCGCTTaGGTGCGCTTCAGGTCTTTC +
Preference number: 5 (lower is better)
Translates to: QKAKVFSMQIGSQVGAVVSASSA*VRFRSF
Trigger: GAAAGACCTGAAGCGCACCAAAGCGCTGCTGGCAGA...CACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGATGGGCAATCTCCCTCTaGCTCGGGGCATTGTTCTTT +
Preference number: 5 (lower is better)
Translates to: ALFGETLLRPPLPRGAVRWAISL*LGALFF
Trigger: AAAGAACAATGCCCCGAGCAAGAGGGAGATTGCCCA...TCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACTGGGCAATCTCCCTCTaGCTCGGGGCATTGTTCTTT +
Preference number: 5 (lower is better)
Translates to: LSLERLCFAHLCRVELSDWAISL*LGALFF
Trigger: AAAGAACAATGCCCCGAGCAAGAGGGAGATTGCCCA...GTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACAGCGCTGTCTTGGCTTaGGCGATGTCATCAATCTGC +
Preference number: 5 (lower is better)
Translates to: LSLERLCFAHLCRVELSDSAVLA*AMSSIC
Trigger: GCAGATTGATGACATCGCCAAAGCCAAGACAGCGCT...GTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGAAGCGCTGTCTTGGCTTaGGCGATGTCATCAATCTGC +
Preference number: 5 (lower is better)
Translates to: ALFGETLLRPPLPRGAVRSAVLA*AMSSIC
Trigger: GCAGATTGATGACATCGCCAAAGCCAAGACAGCGCT...TCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCTCTTCCAGCCGGTTTaGAATCTCGTTTTTCTCACG +
Preference number: 5 (lower is better)
Translates to: CFAHLCRVELSDAHSLESLFQPV*NLVFLT
Trigger: CGTGAGAAAAACGAGATTCAAAACCGGCTGGAAGAG...ACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp ACAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTCTGCTGACGAGGGACTaGTCCACCATGGACTGCTCC +
Preference number: 5 (lower is better)
Translates to: TESQGVFHADRQSGGGSGLLTRD*STMDCS
Trigger: GGAGCAGTCCATGGTGGACAAGTCCCTCGTCAGCAG...ACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCTCGCTCATCTCCTCCTaGGTGTCACGAAGCTGTCGC +
Preference number: 5 (lower is better)
Translates to: RKPRCFPCRSAVRWGQWCSLISS*VSRSCR
Trigger: GCGACAGCTTCGTGACACCAAGGAGGAGATGAGCGA...GCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAATCCTCAATGGCAGCTaGCAAGTCCCCAATGCGTTT +
Preference number: 5 (lower is better)
Translates to: SAAWSCQTPTAWKVPLTEILNGS*QVPNAF
Trigger: AAACGCATTGGGGACTTGCAAGCTGCCATTGAGGAT...TTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCAATCCTCAATGGCAGCTaGCAAGTCCCCAATGCGTTT +
Preference number: 5 (lower is better)
Translates to: FGETLLRPPLPRGAVRRPILNGS*QVPNAF
Trigger: AAACGCATTGGGGACTTGCAAGCTGCCATTGAGGAT...TGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCATCCTCAATGGCAGCTaGCAAGTCCCCAATGCGTTT +
Preference number: 5 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRILNGS*QVPNAF
Trigger: AAACGCATTGGGGACTTGCAAGCTGCCATTGAGGAT...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGGCAGGCAGAGCTGGAAGCCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTATCCTCAATGGCAGCTaGCAAGTCCCCAATGCGTTT +
Preference number: 5 (lower is better)
Translates to: RQAELEAAGGCRWKRSALILNGS*QVPNAF
Trigger: AAACGCATTGGGGACTTGCAAGCTGCCATTGAGGAT...AAGAGCTGATCTCTTCCACCTGCACCCACCCGCGGCTTCCAGCTCTGCCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp ACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTTTGACAACCAGGACTaGACCCCGTCGACCCGGTCC +
Preference number: 5 (lower is better)
Translates to: TKQWQKGRGMANRSSTRYFDNQD*TPSTRS
Trigger: GGACCGGGTCGACGGGGTCAAGTCCTGGTTGTCAAA...GTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp ACAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTTTTGACAACCAGGACTaGACCCCGTCGACCCGGTCC +
Preference number: 5 (lower is better)
Translates to: TESQGVFHADRQSGGGSGFDNQD*TPSTRS
Trigger: GGACCGGGTCGACGGGGTCAAGTCCTGGTTGTCAAA...ACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGGCCTTAGAAGGTCCCTaGTTCTTTGACAACCAGGAC +
Preference number: 5 (lower is better)
Translates to: CRVELSDAHSLESPPDRKALEGP*FFDNQD
Trigger: GTCCTGGTTGTCAAAGAACAAGGGACCTTCTAAGGC...CTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAGCCTTAGAAGGTCCCTaGTTCTTTGACAACCAGGAC +
Preference number: 5 (lower is better)
Translates to: SAAWSCQTPTAWKVPLTEALEGP*FFDNQD
Trigger: GTCCTGGTTGTCAAAGAACAAGGGACCTTCTAAGGC...TTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGGCAGGCAGAGCTGGAAGCCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTGCCTTAGAAGGTCCCTaGTTCTTTGACAACCAGGAC +
Preference number: 5 (lower is better)
Translates to: RQAELEAAGGCRWKRSALALEGP*FFDNQD
Trigger: GTCCTGGTTGTCAAAGAACAAGGGACCTTCTAAGGC...AAGAGCTGATCTCTTCCACCTGCACCCACCCGCGGCTTCCAGCTCTGCCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGGATTTGGATTTCTTCTaGCTCTTCCGAGAGCGCCCT +
Preference number: 5 (lower is better)
Translates to: CRVELSDAHSLESPPDRKDLDFF*LFRERP
Trigger: AGGGCGCTCTCGGAAGAGCAAGAAGAAATCCAAATC...CTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS TCA 90 bp TGCTGGATCTCCTCGTCTTTGTTTCGGATCTGCTCCTCTGACAGCTaGACTTGGATGAGGGGCCGCACGGTGGTGAAGAGCTTCCACCAG +
Preference number: 5 (lower is better)
Translates to: CWISSSLFRICSSDS*TWMRGRTVVKSFHQ
Trigger: CTGGTGGAAGCTCTTCACCACCGTGCGGCCCCTCATCCAAGTTCAGCTGTCAGAGGAGCAGATCCGAAACAAAGACGAGGAGATCCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS GCA 90 bp AGGATGATGCTACCCCGATTGCTGTCAGAGTCAATGTCCGTCAGGTaGAGGTCAGAGCCACTGGCCACCTTGATAGGGATGGGGTTGGAG +
Preference number: 5 (lower is better)
Translates to: RMMLPRLLSESMSVR*RSEPLATLIGMGLE
Trigger: CTCCAACCCCATCCCTATCAAGGTGGCCAGTGGCTCTGACCTGCACCTGACGGACATTGACTCTGACAGCAATCGGGGTAGCATCATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130627.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS GCA 90 bp CAGCTCAGCTGTGAGCCTTTGGCACTTCTTCTTGAGCTGCTGCAGTaGCCGTTGACTCTCATCACTATCTGCTTGCAGGTCCCCAAGCCG +
Preference number: 5 (lower is better)
Translates to: QLSCEPLALLLELLQ*PLTLITICLQVPKP
Trigger: CGGCTTGGGGACCTGCAAGCAGATAGTGATGAGAGTCAACGGGCACTGCAGCAGCTCAAGAAGAAGTGCCAAAGGCTCACAGCTGAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS GCA 90 bp AGTTGCTCCTCCAGCGCTGTCTTGGCTTTGGCGATGTCATCAATCTaGAGGTGCAGGTCTTCCATCTCCACCTCCATCGCTTTCCGTGCC +
Preference number: 5 (lower is better)
Translates to: SCSSSAVLALAMSSI*RCRSSISTSIAFRA
Trigger: GGCACGGAAAGCGATGGAGGTGGAGATGGAAGACCTGCACCTGCAGATTGATGACATCGCCAAAGCCAAGACAGCGCTGGAGGAGCAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CCA 90 bp ACAGGCCAGCAAGTAGTAGAAGACATTGAAAGTAGCCTCACTGGCTaGGCGCCGGGCCACACGCAGCTTCTCCAGGAGCATTGTCTGGAT +
Preference number: 5 (lower is better)
Translates to: TGQQVVEDIESSLTG*APGHTQLLQEHCLD
Trigger: ATCCAGACAATGCTCCTGGAGAAGCTGCGTGTGGCCCGGCGCCCAGCCAGTGAGGCTACTTTCAATGTCTTCTACTACTTGCTGGCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CCA 90 bp GGCTTGGACAGTGGCACAATTCCAAACACATTGTTCTCTGCCAAGTaGTTCAGGTGGAGCTCTGTCCTGAGGGTGGCATCCCCACAGGCC +
Preference number: 5 (lower is better)
Translates to: GLDSGTIPNTLFSAK*FRWSSVLRVASPQA
Trigger: GGCCTGTGGGGATGCCACCCTCAGGACAGAGCTCCACCTGAACCACTTGGCAGAGAACAATGTGTTTGGAATTGTGCCACTGTCCAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CCA 90 bp CTTTTTCTGGGAGTCCTGCAGAAGCCGGGGTGCATTCTGGGTGGCTaGGTTCTGCTTGGTGTAATTCAGCCAGCCAGCCACGTTGTACTC +
Preference number: 5 (lower is better)
Translates to: LFLGVLQKPGCILGG*VLLGVIQPASHVVL
Trigger: GAGTACAACGTGGCTGGCTGGCTGAATTACACCAAGCAGAACCCAGCCACCCAGAATGCACCCCGGCTTCTGCAGGACTCCCAGAAAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CCA 90 bp CAGCCCGCTTCTCATCCACCACGATGTAGTTACGACCATGTTTCTTaGTCAGGTGTGGAGCCAGGACATCAAAGCGCCGGCGGAACTCAG +
Preference number: 5 (lower is better)
Translates to: QPASHPPRCSYDHVS*SGVEPGHQSAGGTQ
Trigger: CTGAGTTCCGCCGGCGCTTTGATGTCCTGGCTCCACACCTGACCAAGAAACATGGTCGTAACTACATCGTGGTGGATGAGAAGCGGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCTGCCTTCTTCACCCTaGAGGTCATCACTGGAGCTG +
Preference number: 5 (lower is better)
Translates to: QKAKVFSMQIGSQVGAVVLPSSP*RSSLEL
Trigger: CAGCTCCAGTGATGACCTCAAGGGTGAAGAAGGCAG...CACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CAA 90 bp TCTGGGGTAAGTGTGTGGGGACAGGGTTATGGGCAGAAGAAAGATGACAAAGGGGCCAGTGAACCGAACTaGGCTGCCCGCTGCAGCACA +
Preference number: 5 (lower is better)
Translates to: SGVSVWGQGYGQKKDDKGASEPN*AARCST
Trigger: TGTGCTGCAGCGGGCAGCCAAGTTCGGTTCACTGGC...CCCTTTGTCATCTTTCTTCTGCCCATAACCCTGTCCCCACACACTTACCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
CDS-3UTR CAA 90 bp AGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGACAATTCCAAACACATaGTTCTCTGCCAAGTGGTTC +
Preference number: 5 (lower is better)
Translates to: RLCFAHLCRVELSDAHSLTIPNT*FSAKWF
Trigger: GAACCACTTGGCAGAGAACAATGTGTTTGGAATTGT...CAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCACAATTCCAAACACATaGTTCTCTGCCAAGTGGTTC +
Preference number: 5 (lower is better)
Translates to: ERLCFAHLCRVELSDAHSTIPNT*FSAKWF
Trigger: GAACCACTTGGCAGAGAACAATGTGTTTGGAATTGT...GCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACACAATTCCAAACACATaGTTCTCTGCCAAGTGGTTC +
Preference number: 5 (lower is better)
Translates to: HLCRVELSDAHSLESPPDTIPNT*FSAKWF
Trigger: GAACCACTTGGCAGAGAACAATGTGTTTGGAATTGT...GTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCACAATTCCAAACACATaGTTCTCTGCCAAGTGGTTC +
Preference number: 5 (lower is better)
Translates to: ASPTSAAWSCQTPTAWKVTIPNT*FSAKWF
Trigger: GAACCACTTGGCAGAGAACAATGTGTTTGGAATTGT...GACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCTGCTTCTCCTCAGGCTaGGACAGTGGCACAATTCCA +
Preference number: 5 (lower is better)
Translates to: KAKVFSMQIGSQVGAVVPCFSSG*DSGTIP
Trigger: TGGAATTGTGCCACTGTCCAAGCCTGAGGAGAAGCA...GGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGCCTTTTAGCTGGTGTTaGAAGATAGCCGAGGACAGC +
Preference number: 5 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQPFSWC*KIAEDS
Trigger: GCTGTCCTCGGCTATCTTCAAACACCAGCTAAAAGG...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACCCTTTTAGCTGGTGTTaGAAGATAGCCGAGGACAGC +
Preference number: 5 (lower is better)
Translates to: LSLERLCFAHLCRVELSDPFSWC*KIAEDS
Trigger: GCTGTCCTCGGCTATCTTCAAACACCAGCTAAAAGG...GTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGCAGGAGGCTGAGATGGAGGTCCACCACCGGCTCCATGGAATGCCAGGCCACCTCTATGTTATCCTCCTaGTATCTCTCCAACTCCTGG +
Preference number: 5 (lower is better)
Translates to: SRRLRWRSTTGSMECQATSMLSS*YLSNSW
Trigger: CCAGGAGTTGGAGAGATACAAGGAGGATAACATAGA...GGTGGCCTGGCATTCCATGGAGCCGGTGGTGGACCTCCATCTCAGCCTCCTGCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTAAATAACTGCTCATTGCACTTGTACTCCACCCAGTaGGTACCGTGGCTGTGGCCC +
Preference number: 5 (lower is better)
Translates to: PRVGAGGRDQLLNNCSLHLYSTQ*VPWLWP
Trigger: GGGCCACAGCCACGGTACCAACTGGGTGGAGTACAA...GTGCAATGAGCAGTTATTTAAGAGCTGATCTCTTCCACCTGCACCCACCCGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCTTTACGACCATGTTTCTaGGTCAGGTGTGGAGCCAGG +
Preference number: 5 (lower is better)
Translates to: AMAEGKGDGKQVQHQVLPLRPCF*VRCGAR
Trigger: CCTGGCTCCACACCTGACCAAGAAACATGGTCGTAA...AGGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTCTGGAGAAGTGAAGATGGAGGGGAGATTCCCAAGGCATCCCACAGGCCCCAGTTACGACCATGTTTCTaGGTCAGGTGTGGAGCCAGG +
Preference number: 5 (lower is better)
Translates to: LWRSEDGGEIPKASHRPQLRPCF*VRCGAR
Trigger: CCTGGCTCCACACCTGACCAAGAAACATGGTCGTAA...CTGGGGCCTGTGGGATGCCTTGGGAATCTCCCCTCCATCTTCACTTCTCCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCTTGGATCTTTCTCTTCTaGAAGTGCTGGCGGGCAAGG +
Preference number: 5 (lower is better)
Translates to: AMAEGKGDGKQVQHQVLPWIFLF*KCWRAR
Trigger: CCTTGCCCGCCAGCACTTCAAGAAGAGAAAGATCCA...AGGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCACCCCCTTGTTCTTCTaGATGTTCTTCTGCACACAG +
Preference number: 5 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRTPLFF*MFFCTQ
Trigger: CTGTGTGCAGAAGAACATCAAGAAGAACAAGGGGGT...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGCAGTCCTTCACCCCCTaGTTCTTCTTGATGTTCTTC +
Preference number: 5 (lower is better)
Translates to: CRVELSDAHSLESPPDRKQSFTP*FFLMFF
Trigger: GAAGAACATCAAGAAGAACAAGGGGGTGAAGGACTG...CTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTAAATAACTGCTCATTGCACGCGGACTCTCCCGTGTaGCGTTCATCAGTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: PRVGAGGRDQLLNNCSLHADSPV*RSSVSS
Trigger: GGAGCTGACTGATGAACGCAACACGGGAGAGTCCGC...GTGCAATGAGCAGTTATTTAAGAGCTGATCTCTTCCACCTGCACCCACCCGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCTGCTGCAGTGCCCGTaGACTCTCATCACTATCTGC +
Preference number: 5 (lower is better)
Translates to: RKPRCFPCRSAVRWGQWCLLQCP*TLITIC
Trigger: GCAGATAGTGATGAGAGTCAACGGGCACTGCAGCAG...GCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGCAGGAGGCTGAGATGGAGGTCCACCACCGGCTCCATGGAATGCCAGGCCACCGTCTTTTTCCTCCATTaGCTGCTTCAAGCTGAAAGC +
Preference number: 5 (lower is better)
Translates to: SRRLRWRSTTGSMECQATVFFLH*LLQAES
Trigger: GCTTTCAGCTTGAAGCAGCAAATGGAGGAAAAAGAC...GGTGGCCTGGCATTCCATGGAGCCGGTGGTGGACCTCCATCTCAGCCTCCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp ACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGTCTTTTTCCTCCATTaGCTGCTTCAAGCTGAAAGC +
Preference number: 5 (lower is better)
Translates to: TSAAWSCQTPTAWKVPLTVFFLH*LLQAES
Trigger: GCTTTCAGCTTGAAGCAGCAAATGGAGGAAAAAGAC...TGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp ACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTCCTCTTCCTGGTCCTaGACCTTGGCCTCCAAGTCC +
Preference number: 5 (lower is better)
Translates to: TKQWQKGRGMANRSSTRYSSSWS*TLASKS
Trigger: GGACTTGGAGGCCAAGGTCAAGGACCAGGAAGAGGA...GTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGACTCTCCATCTCCTaGGAATGGGTCTGTCTCATT +
Preference number: 5 (lower is better)
Translates to: ALFGETLLRPPLPRGAVRRLSIS*EWVCLI
Trigger: AATGAGACAGACCCATTCCAAGGAGATGGAGAGTCG...TCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCCGACTCTCCATCTCCTaGGAATGGGTCTGTCTCATT +
Preference number: 5 (lower is better)
Translates to: KPRCFPCRSAVRWGQWCPRLSIS*EWVCLI
Trigger: AATGAGACAGACCCATTCCAAGGAGATGGAGAGTCG...GGGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGCGACTCTCCATCTCCTaGGAATGGGTCTGTCTCATT +
Preference number: 5 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQRLSIS*EWVCLI
Trigger: AATGAGACAGACCCATTCCAAGGAGATGGAGAGTCG...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp ACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTCTGCCAGCAGCGCTTaGGTGCGCTTCAGGTCTTTC +
Preference number: 5 (lower is better)
Translates to: TKQWQKGRGMANRSSTRYSASSA*VRFRSF
Trigger: GAAAGACCTGAAGCGCACCAAAGCGCTGCTGGCAGA...GTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp ACAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTTCTGCCAGCAGCGCTTaGGTGCGCTTCAGGTCTTTC +
Preference number: 5 (lower is better)
Translates to: TESQGVFHADRQSGGGSGSASSA*VRFRSF
Trigger: GAAAGACCTGAAGCGCACCAAAGCGCTGCTGGCAGA...ACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCTTGGGCAATCTCCCTCTaGCTCGGGGCATTGTTCTTT +
Preference number: 5 (lower is better)
Translates to: AMAEGKGDGKQVQHQVLPWAISL*LGALFF
Trigger: AAAGAACAATGCCCCGAGCAAGAGGGAGATTGCCCA...AGGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCTCTTCCAGCCGGTTTaGAATCTCGTTTTTCTCACG +
Preference number: 5 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRLFQPV*NLVFLT
Trigger: CGTGAGAAAAACGAGATTCAAAACCGGCTGGAAGAG...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGTGGGCCACAGCTGCCTaGTGCTTCTTCATCAGCTCA +
Preference number: 5 (lower is better)
Translates to: QKAKVFSMQIGSQVGAVVWATAA*CFFISS
Trigger: TGAGCTGATGAAGAAGCACAAGGCAGCTGTGGCCCA...CACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGGCCTTAGAAGGTCCCTaGTTCTTTGACAACCAGGAC +
Preference number: 5 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQALEGP*FFDNQD
Trigger: GTCCTGGTTGTCAAAGAACAAGGGACCTTCTAAGGC...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS TCA 90 bp GGTCATCACTGGAGCTGGCTGTGCTTAGGTGTCCTGAGTCCAGGATaGTGCTACCCCGATTGCTGTCAGAGTCAATGTCCGTCAGGTGCA +
Preference number: 5 (lower is better)
Translates to: GHHWSWLCLGVLSPG*CYPDCCQSQCPSGA
Trigger: TGCACCTGACGGACATTGACTCTGACAGCAATCGGGGTAGCATCATCCTGGACTCAGGACACCTAAGCACAGCCAGCTCCAGTGATGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130627.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS TCA 90 bp GTCCCACTGGTACCCGCGATGGTAGCCAGATACTGCACCAGATGCTaGAAGCTGGTAGTCTTGCCACTGCCACTACTACCCAGAAGGACA +
Preference number: 5 (lower is better)
Translates to: VPLVPAMVARYCTRC*KLVVLPLPLLPRRT
Trigger: TGTCCTTCTGGGTAGTAGTGGCAGTGGCAAGACTACCAGCTTTCAGCATCTGGTGCAGTATCTGGCTACCATCGCGGGTACCAGTGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS TCA 90 bp TCTCCACCTCCATCGCTTTCCGTGCCTTTACAGCTGCTGCACAGGTaGATTCCGACTCTTCCAGCTGGTTCTTCAGCTGGGCAATCTCCC +
Preference number: 5 (lower is better)
Translates to: SPPPSLSVPLQLLHR*IPTLPAGSSAGQSP
Trigger: GGGAGATTGCCCAGCTGAAGAACCAGCTGGAAGAGTCGGAATTCACCTGTGCAGCAGCTGTAAAGGCACGGAAAGCGATGGAGGTGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS GCA 90 bp AAGGACAATGGACTGGTCCTGACGACTCATCAACATCGCCCTATATaGAGTCTGGGCTACAGCGTAGATGTGGGGTGCCATGTCCTCCCG +
Preference number: 5 (lower is better)
Translates to: KDNGLVLTTHQHRPI*SLGYSVDVGCHVLP
Trigger: CGGGAGGACATGGCACCCCACATCTACGCTGTAGCCCAGACTGCATATAGGGCGATGTTGATGAGTCGTCAGGACCAGTCCATTGTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS GCA 90 bp GCGAACCAGGTGGGAAGCCTGGTCCACAGCAGCCACGGAGTCATCTaGAACTGGCTCCAAGTCATCAAACGCCAGTTCTATGTTATCCTC +
Preference number: 5 (lower is better)
Translates to: ANQVGSLVHSSHGVI*NWLQVIKRQFYVIL
Trigger: GAGGATAACATAGAACTGGCGTTTGATGACTTGGAGCCAGTTGCAGATGACTCCGTGGCTGCTGTGGACCAGGCTTCCCACCTGGTTCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS GCA 90 bp TCCCCAGGCCAGCCCTCGGCCACAGGAAGGAAGCAGTGCACGAAATaGATCTTGGACCTCTTGATGGTATCAATGAGGGCATCTACTTGC +
Preference number: 5 (lower is better)
Translates to: SPGQPSATGRKQCTK*ILDLLMVSMRASTC
Trigger: GCAAGTAGATGCCCTCATTGATACCATCAAGAGGTCCAAGATGCATTTCGTGCACTGCTTCCTTCCTGTGGCCGAGGGCTGGCCTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS GCA 90 bp GTCTTCCATCTCCACCTCCATCGCTTTCCGTGCCTTTACAGCTGCTaGACAGGTGAATTCCGACTCTTCCAGCTGGTTCTTCAGCTGGGC +
Preference number: 5 (lower is better)
Translates to: VFHLHLHRFPCLYSC*TGEFRLFQLVLQLG
Trigger: GCCCAGCTGAAGAACCAGCTGGAAGAGTCGGAATTCACCTGTGCAGCAGCTGTAAAGGCACGGAAAGCGATGGAGGTGGAGATGGAAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CCA 90 bp TTTATTCTCCACATTCTGTCCATTAATCTCCACCAGTCGATCTCCTaGTACCAGCCCCAAGGCCAGGTCCTTGGTGCCTGCCCCTGGCTC +
Preference number: 5 (lower is better)
Translates to: FILHILSINLHQSIS*YQPQGQVLGACPWL
Trigger: GAGCCAGGGGCAGGCACCAAGGACCTGGCCTTGGGGCTGGTACCAGGAGATCGACTGGTGGAGATTAATGGACAGAATGTGGAGAATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130627.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS CCA 90 bp AGCTCCTCAGACTTGAGCTGGCTGGCTAAGGAGAATCCATCTCTATaGACCAGCCACACCTTCTCCGTCTCATACCAGGCCTCTTCAGCG +
Preference number: 5 (lower is better)
Translates to: SSSDLSWLAKENPSL*TSHTFSVSYQASSA
Trigger: CGCTGAAGAGGCCTGGTATGAGACGGAGAAGGTGTGGCTGGTCCATAGAGATGGATTCTCCTTAGCCAGCCAGCTCAAGTCTGAGGAGCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CCA 90 bp TCCCTCTTGCTCGGGGCATTGTTCTTTAAGTGGTCCAGCATGATCTaGGCATCTGCCAGCAGCGCTTTGGTGCGCTTCAGGTCTTTCCGT +
Preference number: 5 (lower is better)
Translates to: SLLLGALFFKWSSMI*ASASSALVRFRSFR
Trigger: ACGGAAAGACCTGAAGCGCACCAAAGCGCTGCTGGCAGATGCCCAGATCATGCTGGACCACTTAAAGAACAATGCCCCGAGCAAGAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CCA 90 bp TGGTTGGGCCCTTTTTCACACTGGAGCGGCTATGGCCGGAGACGGTaGAGCCACTGGATGACGAGGACTCAGATTCACTCTCTGTTTTCT +
Preference number: 5 (lower is better)
Translates to: WLGPFSHWSGYGRRR*SHWMTRTQIHSLFS
Trigger: AGAAAACAGAGAGTGAATCTGAGTCCTCGTCATCCAGTGGCTCCACCGTCTCCGGCCATAGCCGCTCCAGTGTGAAAAAGGGCCCAACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS-3UTR CAA 90 bp GAGTACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGAGGACGCTAGACTCGTaGAGGTATACCAGTGAGGCC +
Preference number: 5 (lower is better)
Translates to: EYKAMAEGKGDGKQVQHQRTLDS*RYTSEA
Trigger: GGCCTCACTGGTATACCTCAACGAGTCTAGCGTCCT...CTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGTACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TCTGGGGTAAGTGTGTGGGGACAGGGTTATGGGCAGAAGAAAGATGACAAAGGGAGCCACCTGGCCAGCTaGGTCAAAGTCCAGGGAGAG +
Preference number: 5 (lower is better)
Translates to: SGVSVWGQGYGQKKDDKGSHLAS*VKVQGE
Trigger: CTCTCCCTGGACTTTGACCAAGCTGGCCAGGTGGCT...CCCTTTGTCATCTTTCTTCTGCCCATAACCCTGTCCCCACACACTTACCCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGTGCTTCTCCTCAGGCTaGGACAGTGGCACAATTCCA +
Preference number: 5 (lower is better)
Translates to: QKAKVFSMQIGSQVGAVVCFSSG*DSGTIP
Trigger: TGGAATTGTGCCACTGTCCAAGCCTGAGGAGAAGCA...CACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCCTTTTAGCTGGTGTTaGAAGATAGCCGAGGACAGC +
Preference number: 5 (lower is better)
Translates to: KAKVFSMQIGSQVGAVVPPFSWC*KIAEDS
Trigger: GCTGTCCTCGGCTATCTTCAAACACCAGCTAAAAGG...GGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGTCTATGTTATCCTCCTaGTATCTCTCCAACTCCTGG +
Preference number: 5 (lower is better)
Translates to: CRVELSDAHSLESPPDRKSMLSS*YLSNSW
Trigger: CCAGGAGTTGGAGAGATACAAGGAGGATAACATAGA...CTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GAAGGGGCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCTTGTACTCCACCCAGTaGGTACCGTGGCTGTGGCCC +
Preference number: 5 (lower is better)
Translates to: EGAFYFLTSIRSTGRAQPLYSTQ*VPWLWP
Trigger: GGGCCACAGCCACGGTACCAACTGGGTGGAGTACAA...GGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGCCCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GAAGGGGCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCGTGGTCTGGGTAACCTaGGCGGTACATGCGCATCGC +
Preference number: 5 (lower is better)
Translates to: EGAFYFLTSIRSTGRAQPVVWVT*AVHAHR
Trigger: GCGATGCGCATGTACCGCCAAGGTTACCCAGACCAC...GGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGCCCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCTTACGACCATGTTTCTaGGTCAGGTGTGGAGCCAGG +
Preference number: 5 (lower is better)
Translates to: RKPRCFPCRSAVRWGQWCLRPCF*VRCGAR
Trigger: CCTGGCTCCACACCTGACCAAGAAACATGGTCGTAA...GCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGTTACGACCATGTTTCTaGGTCAGGTGTGGAGCCAGG +
Preference number: 5 (lower is better)
Translates to: QKAKVFSMQIGSQVGAVVLRPCF*VRCGAR
Trigger: CCTGGCTCCACACCTGACCAAGAAACATGGTCGTAA...CACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACACCCCCTTGTTCTTCTaGATGTTCTTCTGCACACAG +
Preference number: 5 (lower is better)
Translates to: LSLERLCFAHLCRVELSDTPLFF*MFFCTQ
Trigger: CTGTGTGCAGAAGAACATCAAGAAGAACAAGGGGGT...GTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACCCCCTTGTTCTTCTaGATGTTCTTCTGCACACAG +
Preference number: 5 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQTPLFF*MFFCTQ
Trigger: CTGTGTGCAGAAGAACATCAAGAAGAACAAGGGGGT...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGCAGTCCTTCACCCCCTaGTTCTTCTTGATGTTCTTC +
Preference number: 5 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQQSFTP*FFLMFF
Trigger: GAAGAACATCAAGAAGAACAAGGGGGTGAAGGACTG...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCTGGATCTCCTCGTCTTaGTTTCGGATCTGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: SNGRREGGWQTGPAPGTAWISSS*FRICSS
Trigger: AGAGGAGCAGATCCGAAACAAAGACGAGGAGATCCA...GGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTAAATAACTGCTCATTGCACTCCACCTTCTCAAGCTaGCTGCGCAGCTGCTGGATC +
Preference number: 5 (lower is better)
Translates to: PRVGAGGRDQLLNNCSLHSTFSS*LRSCWI
Trigger: GATCCAGCAGCTGCGCAGCAAGCTTGAGAAGGTGGA...GTGCAATGAGCAGTTATTTAAGAGCTGATCTCTTCCACCTGCACCCACCCGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GAAGGGGCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCGCGGACTCTCCCGTGTaGCGTTCATCAGTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: EGAFYFLTSIRSTGRAQPADSPV*RSSVSS
Trigger: GGAGCTGACTGATGAACGCAACACGGGAGAGTCCGC...GGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGCCCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp ACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACCTGCTGCAGTGCCCGTaGACTCTCATCACTATCTGC +
Preference number: 5 (lower is better)
Translates to: TKQWQKGRGMANRSSTRYLLQCP*TLITIC
Trigger: GCAGATAGTGATGAGAGTCAACGGGCACTGCAGCAG...GTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCGTCTTTTTCCTCCATTaGCTGCTTCAAGCTGAAAGC +
Preference number: 5 (lower is better)
Translates to: LFGETLLRPPLPRGAVRRVFFLH*LLQAES
Trigger: GCTTTCAGCTTGAAGCAGCAAATGGAGGAAAAAGAC...GCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCAGTCTTTTTCCTCCATTaGCTGCTTCAAGCTGAAAGC +
Preference number: 5 (lower is better)
Translates to: FGETLLRPPLPRGAVRRPVFFLH*LLQAES
Trigger: GCTTTCAGCTTGAAGCAGCAAATGGAGGAAAAAGAC...TGGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAAAGGTCTTTTTCCTCCATTaGCTGCTTCAAGCTGAAAGC +
Preference number: 5 (lower is better)
Translates to: CRVELSDAHSLESPPDRKVFFLH*LLQAES
Trigger: GCTTTCAGCTTGAAGCAGCAAATGGAGGAAAAAGAC...CTTTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp ACCTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACACTCATCCTTAGACTCTaGAGAAGAAATGTCCTGAAG +
Preference number: 5 (lower is better)
Translates to: TSAAWSCQTPTAWKVPLTLILRL*RRNVLK
Trigger: CTTCAGGACATTTCTTCTCAAGAGTCTAAGGATGAG...TGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCCCTCATCCTTAGACTCTaGAGAAGAAATGTCCTGAAG +
Preference number: 5 (lower is better)
Translates to: LWRDSASPTSAAWSCQTPLILRL*RRNVLK
Trigger: CTTCAGGACATTTCTTCTCAAGAGTCTAAGGATGAG...GGGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGACTCATCCTTAGACTCTaGAGAAGAAATGTCCTGAAG +
Preference number: 5 (lower is better)
Translates to: LCRVELSDAHSLESPPDRLILRL*RRNVLK
Trigger: CTTCAGGACATTTCTTCTCAAGAGTCTAAGGATGAG...TCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACAGGTCCTGGTCCTTGACCTaGGCCTCCAAGTCCCGGAGC +
Preference number: 5 (lower is better)
Translates to: LQSDKQTKTSTFHCAHHRSWSLT*ASKSRS
Trigger: GCTCCGGGACTTGGAGGCCAAGGTCAAGGACCAGGA...CCTGTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCCGACTCTCCATCTCCTaGGAATGGGTCTGTCTCATT +
Preference number: 5 (lower is better)
Translates to: SNGRREGGWQTGPAPGTARLSIS*EWVCLI
Trigger: AATGAGACAGACCCATTCCAAGGAGATGGAGAGTCG...GGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCGACTCTCCATCTCCTaGGAATGGGTCTGTCTCATT +
Preference number: 5 (lower is better)
Translates to: KAKVFSMQIGSQVGAVVPRLSIS*EWVCLI
Trigger: AATGAGACAGACCCATTCCAAGGAGATGGAGAGTCG...GGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCTGGGCAATCTCCCTCTaGCTCGGGGCATTGTTCTTT +
Preference number: 5 (lower is better)
Translates to: RKPRCFPCRSAVRWGQWCWAISL*LGALFF
Trigger: AAAGAACAATGCCCCGAGCAAGAGGGAGATTGCCCA...GCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp ACAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTTCCTCCAGCGCTGTCTaGGCTTTGGCGATGTCATCA +
Preference number: 5 (lower is better)
Translates to: TESQGVFHADRQSGGGSGSSSAV*ALAMSS
Trigger: TGATGACATCGCCAAAGCCAAGACAGCGCTGGAGGA...ACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACCTCTTCCAGCCGGTTTaGAATCTCGTTTTTCTCACG +
Preference number: 5 (lower is better)
Translates to: LSLERLCFAHLCRVELSDLFQPV*NLVFLT
Trigger: CGTGAGAAAAACGAGATTCAAAACCGGCTGGAAGAG...GTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGCTCTTCCAGCCGGTTTaGAATCTCGTTTTTCTCACG +
Preference number: 5 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQLFQPV*NLVFLT
Trigger: CGTGAGAAAAACGAGATTCAAAACCGGCTGGAAGAG...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TCTGGGGTAAGTGTGTGGGGACAGGGTTATGGGCAGAAGAAAGATGACAAAGGGCTGCTGACGAGGGACTaGTCCACCATGGACTGCTCC +
Preference number: 5 (lower is better)
Translates to: SGVSVWGQGYGQKKDDKGLLTRD*STMDCS
Trigger: GGAGCAGTCCATGGTGGACAAGTCCCTCGTCAGCAG...CCCTTTGTCATCTTTCTTCTGCCCATAACCCTGTCCCCACACACTTACCCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCTATCCTCAATGGCAGCTaGCAAGTCCCCAATGCGTTT +
Preference number: 5 (lower is better)
Translates to: AMAEGKGDGKQVQHQVLPILNGS*QVPNAF
Trigger: AAACGCATTGGGGACTTGCAAGCTGCCATTGAGGAT...AGGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGAAGTGAAGATGGAGGGGAGATTCCCAAGGCATCCCACAGGCCCCAGCTGCAGATCCTCAATGGCAGCTaGCAAGTCCCCAATGCGTTT +
Preference number: 5 (lower is better)
Translates to: RSEDGGEIPKASHRPQLQILNGS*QVPNAF
Trigger: AAACGCATTGGGGACTTGCAAGCTGCCATTGAGGAT...CTGCAGCTGGGGCCTGTGGGATGCCTTGGGAATCTCCCCTCCATCTTCACTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCGCCTTAGAAGGTCCCTaGTTCTTTGACAACCAGGAC +
Preference number: 5 (lower is better)
Translates to: SNGRREGGWQTGPAPGTAALEGP*FFDNQD
Trigger: GTCCTGGTTGTCAAAGAACAAGGGACCTTCTAAGGC...GGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS TCA 90 bp GAAGGAAAAACGTTTGACAATCATCTGAGAGTTCTGCTTGGCCAGTaGACCGAACTTGGCTGCCCGCTGCAGCACAGAGCCCCGGAAGCT +
Preference number: 5 (lower is better)
Translates to: EGKTFDNHLRVLLGQ*TELGCPLQHRAPEA
Trigger: AGCTTCCGGGGCTCTGTGCTGCAGCGGGCAGCCAAGTTCGGTTCACTGGCCAAGCAGAACTCTCAGATGATTGTCAAACGTTTTTCCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130627.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS TCA 90 bp GTCTTGCCACTGCCACTACTACCCAGAAGGACAATGGACTGGTCCTaGCGACTCATCAACATCGCCCTATATGCAGTCTGGGCTACAGCG +
Preference number: 5 (lower is better)
Translates to: VLPLPLLPRRTMDWS*RLINIALYAVWATA
Trigger: CGCTGTAGCCCAGACTGCATATAGGGCGATGTTGATGAGTCGTCAGGACCAGTCCATTGTCCTTCTGGGTAGTAGTGGCAGTGGCAAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS TCA 90 bp CAATCTCCCTCTTGCTCGGGGCATTGTTCTTTAAGTGGTCCAGCATaGTCTGGGCATCTGCCAGCAGCGCTTTGGTGCGCTTCAGGTCTT +
Preference number: 5 (lower is better)
Translates to: QSPSCSGHCSLSGPA*SGHLPAALWCASGL
Trigger: AAGACCTGAAGCGCACCAAAGCGCTGCTGGCAGATGCCCAGATCATGCTGGACCACTTAAAGAACAATGCCCCGAGCAAGAGGGAGATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS TCA 90 bp AGCTTCTCCTGTAGCTCTTGCTTCTCCTTGTTGGACTCTTCAATCTaGGCCTGGAGATCGTTCATCTGTGCCATGTCCCGGGAGGCCTGG +
Preference number: 5 (lower is better)
Translates to: SFSCSSCFSLLDSSI*AWRSFICAMSREAW
Trigger: CCAGGCCTCCCGGGACATGGCACAGATGAACGATCTCCAGGCTCAGATTGAAGAGTCCAACAAGGAGAAGCAAGAGCTACAGGAGAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS GCA 90 bp CAGGTCTTCCATCTCCACCTCCATCGCTTTCCGTGCCTTTACAGCTaGTGCACAGGTGAATTCCGACTCTTCCAGCTGGTTCTTCAGCTG +
Preference number: 5 (lower is better)
Translates to: QVFHLHLHRFPCLYS*CTGEFRLFQLVLQL
Trigger: CAGCTGAAGAACCAGCTGGAAGAGTCGGAATTCACCTGTGCAGCAGCTGTAAAGGCACGGAAAGCGATGGAGGTGGAGATGGAAGACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS GCA 90 bp AATCTGCAGGTGCAGGTCTTCCATCTCCACCTCCATCGCTTTCCGTaGCTTTACAGCTGCTGCACAGGTGAATTCCGACTCTTCCAGCTG +
Preference number: 5 (lower is better)
Translates to: NLQVQVFHLHLHRFP*LYSCCTGEFRLFQL
Trigger: CAGCTGGAAGAGTCGGAATTCACCTGTGCAGCAGCTGTAAAGGCACGGAAAGCGATGGAGGTGGAGATGGAAGACCTGCACCTGCAGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS GCA 90 bp TCCTCCAGCGCTGTCTTGGCTTTGGCGATGTCATCAATCTGCAGGTaGAGGTCTTCCATCTCCACCTCCATCGCTTTCCGTGCCTTTACA +
Preference number: 5 (lower is better)
Translates to: SSSAVLALAMSSICR*RSSISTSIAFRAFT
Trigger: TGTAAAGGCACGGAAAGCGATGGAGGTGGAGATGGAAGACCTGCACCTGCAGATTGATGACATCGCCAAAGCCAAGACAGCGCTGGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS GCA 90 bp CGGTACAGGTACCGCATCATGAGGCTGTCGACCTCTTTCTTTCGCTaGTTCTCTTCCTTCTTTGACCGTCTTGGAGTTTGCCCCGCTTCC +
Preference number: 5 (lower is better)
Translates to: RYRYRIMRLSTSFFR*FSSFFDRLGVCPAS
Trigger: GGAAGCGGGGCAAACTCCAAGACGGTCAAAGAAGGAAGAGAAGCAGCGAAAGAAAGAGGTCGACAGCCTCATGATGCGGTACCTGTACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS CCA 90 bp GCTGCTGCACAGGTGAATTCCGACTCTTCCAGCTGGTTCTTCAGCTaGGCAATCTCCCTCTTGCTCGGGGCATTGTTCTTTAAGTGGTCC +
Preference number: 5 (lower is better)
Translates to: AAAQVNSDSSSWFFS*AISLLLGALFFKWS
Trigger: GGACCACTTAAAGAACAATGCCCCGAGCAAGAGGGAGATTGCCCAGCTGAAGAACCAGCTGGAAGAGTCGGAATTCACCTGTGCAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACAGGAGCCACCTGGCCAGCTaGGTCAAAGTCCAGGGAGAG +
Preference number: 5 (lower is better)
Translates to: LQSDKQTKTSTFHCAHHRSHLAS*VKVQGE
Trigger: CTCTCCCTGGACTTTGACCAAGCTGGCCAGGTGGCT...CCTGTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACGCCACAATTCCAAACACATaGTTCTCTGCCAAGTGGTTC +
Preference number: 5 (lower is better)
Translates to: SLERLCFAHLCRVELSDATIPNT*FSAKWF
Trigger: GAACCACTTGGCAGAGAACAATGTGTTTGGAATTGT...GGCGTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp ACAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTTGCTTCTCCTCAGGCTaGGACAGTGGCACAATTCCA +
Preference number: 5 (lower is better)
Translates to: TESQGVFHADRQSGGGSGCFSSG*DSGTIP
Trigger: TGGAATTGTGCCACTGTCCAAGCCTGAGGAGAAGCA...ACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GAGTACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGTGCTTCTCCTCAGGCTaGGACAGTGGCACAATTCCA +
Preference number: 5 (lower is better)
Translates to: EYKAMAEGKGDGKQVQHQCFSSG*DSGTIP
Trigger: TGGAATTGTGCCACTGTCCAAGCCTGAGGAGAAGCA...CTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGTACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCTCTATGTTATCCTCCTaGTATCTCTCCAACTCCTGG +
Preference number: 5 (lower is better)
Translates to: KPRCFPCRSAVRWGQWCPSMLSS*YLSNSW
Trigger: CCAGGAGTTGGAGAGATACAAGGAGGATAACATAGA...GGGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGTCTATGTTATCCTCCTaGTATCTCTCCAACTCCTGG +
Preference number: 5 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQSMLSS*YLSNSW
Trigger: CCAGGAGTTGGAGAGATACAAGGAGGATAACATAGA...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACAGGTTGTACTCCACCCAGTaGGTACCGTGGCTGTGGCCC +
Preference number: 5 (lower is better)
Translates to: LQSDKQTKTSTFHCAHHRLYSTQ*VPWLWP
Trigger: GGGCCACAGCCACGGTACCAACTGGGTGGAGTACAA...CCTGTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp ACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTTACGACCATGTTTCTaGGTCAGGTGTGGAGCCAGG +
Preference number: 5 (lower is better)
Translates to: TKQWQKGRGMANRSSTRYLRPCF*VRCGAR
Trigger: CCTGGCTCCACACCTGACCAAGAAACATGGTCGTAA...GTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTCTGGAGAAGTGAAGATGGAGGGGAGATTCCCAAGGCATCCCACAGGCCCCAGACCCCCTTGTTCTTCTaGATGTTCTTCTGCACACAG +
Preference number: 5 (lower is better)
Translates to: LWRSEDGGEIPKASHRPQTPLFF*MFFCTQ
Trigger: CTGTGTGCAGAAGAACATCAAGAAGAACAAGGGGGT...CTGGGGCCTGTGGGATGCCTTGGGAATCTCCCCTCCATCTTCACTTCTCCAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCTGGATCTCCTCGTCTTaGTTTCGGATCTGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: RKPRCFPCRSAVRWGQWCWISSS*FRICSS
Trigger: AGAGGAGCAGATCCGAAACAAAGACGAGGAGATCCA...GCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGGTCTTTTTCCTCCATTaGCTGCTTCAAGCTGAAAGC +
Preference number: 5 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQVFFLH*LLQAES
Trigger: GCTTTCAGCTTGAAGCAGCAAATGGAGGAAAAAGAC...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TCTGCCGCGTGGAGCTGTCAGACGCCCACAGCCTGGAAAGTCCCCCTGACAGAACTCATCCTTAGACTCTaGAGAAGAAATGTCCTGAAG +
Preference number: 5 (lower is better)
Translates to: SAAWSCQTPTAWKVPLTELILRL*RRNVLK
Trigger: CTTCAGGACATTTCTTCTCAAGAGTCTAAGGATGAG...TTCTGTCAGGGGGACTTTCCAGGCTGTGGGCGTCTGACAGCTCCACGCGGCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACAGGTCCCGGAGCTGCTTCTaGACCTTGGCCAGAGAAGCC +
Preference number: 5 (lower is better)
Translates to: LQSDKQTKTSTFHCAHHRSRSCF*TLAREA
Trigger: GGCTTCTCTGGCCAAGGTCAAGAAGCAGCTCCGGGA...CCTGTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACCTGAGCGTGGAGAGCTaGCTCTCCAGCTCCCGTTTC +
Preference number: 5 (lower is better)
Translates to: GLQSDKQTKTSTFHCAHHLSVES*LSSSRF
Trigger: GAAACGGGAGCTGGAGAGCAAGCTCTCCACGCTCAG...GTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GAAGGGGCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCTCTGCCAGCAGCGCTTaGGTGCGCTTCAGGTCTTTC +
Preference number: 5 (lower is better)
Translates to: EGAFYFLTSIRSTGRAQPSASSA*VRFRSF
Trigger: GAAAGACCTGAAGCGCACCAAAGCGCTGCTGGCAGA...GGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGCCCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GAGTACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGAGCGCTGTCTTGGCTTaGGCGATGTCATCAATCTGC +
Preference number: 5 (lower is better)
Translates to: EYKAMAEGKGDGKQVQHQSAVLA*AMSSIC
Trigger: GCAGATTGATGACATCGCCAAAGCCAAGACAGCGCT...CTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGTACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACCTGCTGACGAGGGACTaGTCCACCATGGACTGCTCC +
Preference number: 5 (lower is better)
Translates to: GLQSDKQTKTSTFHCAHHLLTRD*STMDCS
Trigger: GGAGCAGTCCATGGTGGACAAGTCCCTCGTCAGCAG...GTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp ACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTTCTCCATGGTTTCTTaGAGCCGACTGGCCAGGTTC +
Preference number: 5 (lower is better)
Translates to: TKQWQKGRGMANRSSTRYFSMVS*SRLARF
Trigger: GAACCTGGCCAGTCGGCTCAAAGAAACCATGGAGAA...GTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GAAGGGGCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCTCGCTCATCTCCTCCTaGGTGTCACGAAGCTGTCGC +
Preference number: 5 (lower is better)
Translates to: EGAFYFLTSIRSTGRAQPSLISS*VSRSCR
Trigger: GCGACAGCTTCGTGACACCAAGGAGGAGATGAGCGA...GGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGCCCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGGCCTTAGAAGGTCCCTaGTTCTTTGACAACCAGGAC +
Preference number: 5 (lower is better)
Translates to: QKAKVFSMQIGSQVGAVVALEGP*FFDNQD
Trigger: GTCCTGGTTGTCAAAGAACAAGGGACCTTCTAAGGC...CACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS GCA 90 bp AGCTCTGGGATGGGCTGTACCTTGAGCCGCACACTGTCCCCAGACTaGCGGATCATCTCCACAATTTCATCCCTGGATTTATTCTCCACA +
Preference number: 5 (lower is better)
Translates to: SSGMGCTLSRTLSPD*RIISTISSLDLFST
Trigger: TGTGGAGAATAAATCCAGGGATGAAATTGTGGAGATGATCCGGCAGTCTGGGGACAGTGTGCGGCTCAAGGTACAGCCCATCCCAGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130627.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS GCA 90 bp AGGTCCTCGTTCTCGTCACTTTCCATCTCATCCTCAATGGCAGCTTaGAAGTCCCCAATGCGTTTGAACGCCAGCTTTAGGTCGGCTTGC +
Preference number: 5 (lower is better)
Translates to: RSSFSSLSISSSMAA*KSPMRLNASFRSAC
Trigger: GCAAGCCGACCTAAAGCTGGCGTTCAAACGCATTGGGGACTTGCAAGCTGCCATTGAGGATGAGATGGAAAGTGACGAGAACGAGGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CCA 90 bp TGGAAGCCTGGTGTGTCCACGATCATCATGGAACAGAGTGAGTGCTaGCTGGACTTGAGAGCCCTGTTTACCAGGGAGATGAGGAGAGTA +
Preference number: 5 (lower is better)
Translates to: WKPGVSTIIMEQSEC*LDLRALFTREMRRV
Trigger: TACTCTCCTCATCTCCCTGGTAAACAGGGCTCTCAAGTCCAGCCAGCACTCACTCTGTTCCATGATGATCGTGGACACACCAGGCTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CCA 90 bp CAGGTGGGAAGCCTGGTCCACAGCAGCCACGGAGTCATCTGCAACTaGCTCCAAGTCATCAAACGCCAGTTCTATGTTATCCTCCTTGTA +
Preference number: 5 (lower is better)
Translates to: QVGSLVHSSHGVICN*LQVIKRQFYVILLV
Trigger: TACAAGGAGGATAACATAGAACTGGCGTTTGATGACTTGGAGCCAGTTGCAGATGACTCCGTGGCTGCTGTGGACCAGGCTTCCCACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGTTCCGCCCGCCATCTTaGTCCTTATCTTTCTTCATG +
Preference number: 5 (lower is better)
Translates to: QKAKVFSMQIGSQVGAVVFRPPS*SLSFFM
Trigger: CATGAAGAAAGATAAGGACAAAGATGGCGGGCGGAA...CACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS-3UTR CAA 90 bp CTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGTACAAAGCAATGGAGCCACTGGCCACCTaGATAGGGATGGGGTTGGAG +
Preference number: 5 (lower is better)
Translates to: LTSIRSTGRAQPNEYKAMEPLAT*IGMGLE
Trigger: CTCCAACCCCATCCCTATCAAGGTGGCCAGTGGCTC...CATTGCTTTGTACTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
CDS-3UTR CAA 90 bp CTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACACAATTCCAAACACATaGTTCTCTGCCAAGTGGTTC +
Preference number: 5 (lower is better)
Translates to: LSLERLCFAHLCRVELSDTIPNT*FSAKWF
Trigger: GAACCACTTGGCAGAGAACAATGTGTTTGGAATTGT...GTCTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGCTCTCTTTGGAGAGACTCTGCTTCGCCCACCTCTGCCGCGTGGAGCTGTCAGACAATTCCAAACACATaGTTCTCTGCCAAGTGGTTC +
Preference number: 5 (lower is better)
Translates to: SSLWRDSASPTSAAWSCQTIPNT*FSAKWF
Trigger: GAACCACTTGGCAGAGAACAATGTGTTTGGAATTGT...CTGACAGCTCCACGCGGCAGAGGTGGGCGAAGCAGAGTCTCTCCAAAGAGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTAAATAACTGCTCATTGCACTGCTTCTCCTCAGGCTaGGACAGTGGCACAATTCCA +
Preference number: 5 (lower is better)
Translates to: PRVGAGGRDQLLNNCSLHCFSSG*DSGTIP
Trigger: TGGAATTGTGCCACTGTCCAAGCCTGAGGAGAAGCA...GTGCAATGAGCAGTTATTTAAGAGCTGATCTCTTCCACCTGCACCCACCCGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GAGTACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGCCTTTTAGCTGGTGTTaGAAGATAGCCGAGGACAGC +
Preference number: 5 (lower is better)
Translates to: EYKAMAEGKGDGKQVQHQPFSWC*KIAEDS
Trigger: GCTGTCCTCGGCTATCTTCAAACACCAGCTAAAAGG...CTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGTACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACAGGGAGTGCTGGCTGGACTaGAGAGCCCTGTTTACCAGG +
Preference number: 5 (lower is better)
Translates to: LQSDKQTKTSTFHCAHHRECWLD*RALFTR
Trigger: CCTGGTAAACAGGGCTCTCAAGTCCAGCCAGCACTC...CCTGTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGGTGGTCTGGGTAACCTaGGCGGTACATGCGCATCGC +
Preference number: 5 (lower is better)
Translates to: AFYFLTSIRSTGRAQPNEVVWVT*AVHAHR
Trigger: GCGATGCGCATGTACCGCCAAGGTTACCCAGACCAC...CTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTAAATAACTGCTCATTGCACTTACGACCATGTTTCTaGGTCAGGTGTGGAGCCAGG +
Preference number: 5 (lower is better)
Translates to: PRVGAGGRDQLLNNCSLHLRPCF*VRCGAR
Trigger: CCTGGCTCCACACCTGACCAAGAAACATGGTCGTAA...GTGCAATGAGCAGTTATTTAAGAGCTGATCTCTTCCACCTGCACCCACCCGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGACCCCCTTGTTCTTCTaGATGTTCTTCTGCACACAG +
Preference number: 5 (lower is better)
Translates to: QKAKVFSMQIGSQVGAVVTPLFF*MFFCTQ
Trigger: CTGTGTGCAGAAGAACATCAAGAAGAACAAGGGGGT...CACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCAGTCCTTCACCCCCTaGTTCTTCTTGATGTTCTTC +
Preference number: 5 (lower is better)
Translates to: RKPRCFPCRSAVRWGQWCQSFTP*FFLMFF
Trigger: GAAGAACATCAAGAAGAACAAGGGGGTGAAGGACTG...GCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp ACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGGATCTCCTCGTCTTaGTTTCGGATCTGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: TKQWQKGRGMANRSSTRYWISSS*FRICSS
Trigger: AGAGGAGCAGATCCGAAACAAAGACGAGGAGATCCA...GTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACTCCACCTTCTCAAGCTaGCTGCGCAGCTGCTGGATC +
Preference number: 5 (lower is better)
Translates to: GLQSDKQTKTSTFHCAHHSTFSS*LRSCWI
Trigger: GATCCAGCAGCTGCGCAGCAAGCTTGAGAAGGTGGA...GTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACCTCATCACTATCTGCTaGCAGGTCCCCAAGCCGCCT +
Preference number: 5 (lower is better)
Translates to: GLQSDKQTKTSTFHCAHHLITIC*QVPKPP
Trigger: AGGCGGCTTGGGGACCTGCAAGCAGATAGTGATGAG...GTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GAAGGGGCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCCTGCTGCAGTGCCCGTaGACTCTCATCACTATCTGC +
Preference number: 5 (lower is better)
Translates to: EGAFYFLTSIRSTGRAQPLLQCP*TLITIC
Trigger: GCAGATAGTGATGAGAGTCAACGGGCACTGCAGCAG...GGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGCCCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGAAGTGAAGATGGAGGGGAGATTCCCAAGGCATCCCACAGGCCCCAGCTGCAGGTCTTTTTCCTCCATTaGCTGCTTCAAGCTGAAAGC +
Preference number: 5 (lower is better)
Translates to: RSEDGGEIPKASHRPQLQVFFLH*LLQAES
Trigger: GCTTTCAGCTTGAAGCAGCAAATGGAGGAAAAAGAC...CTGCAGCTGGGGCCTGTGGGATGCCTTGGGAATCTCCCCTCCATCTTCACTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGTCCCGGAGCTGCTTCTaGACCTTGGCCAGAGAAGCC +
Preference number: 5 (lower is better)
Translates to: AFYFLTSIRSTGRAQPNESRSCF*TLAREA
Trigger: GGCTTCTCTGGCCAAGGTCAAGAAGCAGCTCCGGGA...CTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACAGGTCCTCTTCCTGGTCCTaGACCTTGGCCTCCAAGTCC +
Preference number: 5 (lower is better)
Translates to: LQSDKQTKTSTFHCAHHRSSSWS*TLASKS
Trigger: GGACTTGGAGGCCAAGGTCAAGGACCAGGAAGAGGA...CCTGTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACTCTGCCAGCAGCGCTTaGGTGCGCTTCAGGTCTTTC +
Preference number: 5 (lower is better)
Translates to: GLQSDKQTKTSTFHCAHHSASSA*VRFRSF
Trigger: GAAAGACCTGAAGCGCACCAAAGCGCTGCTGGCAGA...GTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTAAATAACTGCTCATTGCACTGGGCAATCTCCCTCTaGCTCGGGGCATTGTTCTTT +
Preference number: 5 (lower is better)
Translates to: PRVGAGGRDQLLNNCSLHWAISL*LGALFF
Trigger: AAAGAACAATGCCCCGAGCAAGAGGGAGATTGCCCA...GTGCAATGAGCAGTTATTTAAGAGCTGATCTCTTCCACCTGCACCCACCCGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGTACAAAGCAATGTTTGACAACCAGGACTaGACCCCGTCGACCCGGTCC +
Preference number: 5 (lower is better)
Translates to: LTSIRSTGRAQPNEYKAMFDNQD*TPSTRS
Trigger: GGACCGGGTCGACGGGGTCAAGTCCTGGTTGTCAAA...CATTGCTTTGTACTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TTAGGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCTTCCGGGACAGGCCTaGGGCCTCTTCATTTGGGCC +
Preference number: 5 (lower is better)
Translates to: LGLQSDKQTKTSTFHCAHLPGQA*GLFIWA
Trigger: GGCCCAAATGAAGAGGCCCAAGGCCTGTCCCGGAAG...GTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000167856.8
CDS TCA 90 bp CCGAGGCACTCTCATCCCGGCTCCGTTGAGAGAAGGAAAAACGTTTaGCAATCATCTGAGAGTTCTGCTTGGCCAGTGAACCGAACTTGG +
Preference number: 5 (lower is better)
Translates to: PRHSHPGSVERRKNV*QSSESSAWPVNRTW
Trigger: CCAAGTTCGGTTCACTGGCCAAGCAGAACTCTCAGATGATTGTCAAACGTTTTTCCTTCTCTCAACGGAGCCGGGATGAGAGTGCCTCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130627.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS GCA 90 bp CACCAGGGCCAGTCCTTCACCCCCTTGTTCTTCTTGATGTTCTTCTaGACACAGCGAATGGCCAGGTCCTGGATCTTTCTCTTCTTGAAG +
Preference number: 5 (lower is better)
Translates to: HQGQSFTPLFFLMFF*TQRMARSWIFLFLK
Trigger: CTTCAAGAAGAGAAAGATCCAGGACCTGGCCATTCGCTGTGTGCAGAAGAACATCAAGAAGAACAAGGGGGTGAAGGACTGGCCCTGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CCA 90 bp CTCATCCACCACGATGTAGTTACGACCATGTTTCTTGGTCAGGTGTaGAGCCAGGACATCAAAGCGCCGGCGGAACTCAGAAAACACCAT +
Preference number: 5 (lower is better)
Translates to: LIHHDVVTTMFLGQV*SQDIKAPAELRKHH
Trigger: ATGGTGTTTTCTGAGTTCCGCCGGCGCTTTGATGTCCTGGCTCCACACCTGACCAAGAAACATGGTCGTAACTACATCGTGGTGGATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACAGGACGCTAGACTCGTaGAGGTATACCAGTGAGGCC +
Preference number: 5 (lower is better)
Translates to: GLQSDKQTKTSTFHCAHHRTLDS*RYTSEA
Trigger: GGCCTCACTGGTATACCTCAACGAGTCTAGCGTCCT...GTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGTCCCGCCGACACCCCTaGAACATGTGCATCACCTTC +
Preference number: 5 (lower is better)
Translates to: AFYFLTSIRSTGRAQPNESRRHP*NMCITF
Trigger: GAAGGTGATGCACATGTTCAAGGGGTGTCGGCGGGA...CTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTCTGGAGAAGTGAAGATGGAGGGGAGATTCCCAAGGCATCCCACAGGCCCCAGACAATTCCAAACACATaGTTCTCTGCCAAGTGGTTC +
Preference number: 5 (lower is better)
Translates to: LWRSEDGGEIPKASHRPQTIPNT*FSAKWF
Trigger: GAACCACTTGGCAGAGAACAATGTGTTTGGAATTGT...CTGGGGCCTGTGGGATGCCTTGGGAATCTCCCCTCCATCTTCACTTCTCCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCACAATTCCAAACACATaGTTCTCTGCCAAGTGGTTC +
Preference number: 5 (lower is better)
Translates to: KAKVFSMQIGSQVGAVVPTIPNT*FSAKWF
Trigger: GAACCACTTGGCAGAGAACAATGTGTTTGGAATTGT...GGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGGAGTGCTGGCTGGACTaGAGAGCCCTGTTTACCAGG +
Preference number: 5 (lower is better)
Translates to: AFYFLTSIRSTGRAQPNEECWLD*RALFTR
Trigger: CCTGGTAAACAGGGCTCTCAAGTCCAGCCAGCACTC...CTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGAGCCAGCCAGCCACGTaGTACTCCACCCAGTTGGTA +
Preference number: 5 (lower is better)
Translates to: AFYFLTSIRSTGRAQPNESQPAT*YSTQLV
Trigger: TACCAACTGGGTGGAGTACAACGTGGCTGGCTGGCT...CTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGTACAAAGCAATGAGCCAGCCAGCCACGTaGTACTCCACCCAGTTGGTA +
Preference number: 5 (lower is better)
Translates to: LTSIRSTGRAQPNEYKAMSQPAT*YSTQLV
Trigger: TACCAACTGGGTGGAGTACAACGTGGCTGGCTGGCT...CATTGCTTTGTACTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TCTGGGGTAAGTGTGTGGGGACAGGGTTATGGGCAGAAGAAAGATGACAAAGGGTGGATCTTTCTCTTCTaGAAGTGCTGGCGGGCAAGG +
Preference number: 5 (lower is better)
Translates to: SGVSVWGQGYGQKKDDKGWIFLF*KCWRAR
Trigger: CCTTGCCCGCCAGCACTTCAAGAAGAGAAAGATCCA...CCCTTTGTCATCTTTCTTCTGCCCATAACCCTGTCCCCACACACTTACCCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp ACAGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTACCCCCTTGTTCTTCTaGATGTTCTTCTGCACACAG +
Preference number: 5 (lower is better)
Translates to: TESQGVFHADRQSGGGSGTPLFF*MFFCTQ
Trigger: CTGTGTGCAGAAGAACATCAAGAAGAACAAGGGGGT...ACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp ACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACCAGTCCTTCACCCCCTaGTTCTTCTTGATGTTCTTC +
Preference number: 5 (lower is better)
Translates to: TKQWQKGRGMANRSSTRYQSFTP*FFLMFF
Trigger: GAAGAACATCAAGAAGAACAAGGGGGTGAAGGACTG...GTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GAGTACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGCAGTCCTTCACCCCCTaGTTCTTCTTGATGTTCTTC +
Preference number: 5 (lower is better)
Translates to: EYKAMAEGKGDGKQVQHQQSFTP*FFLMFF
Trigger: GAAGAACATCAAGAAGAACAAGGGGGTGAAGGACTG...CTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGTACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TTAGGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACGCGGACTCTCCCGTGTaGCGTTCATCAGTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: LGLQSDKQTKTSTFHCAHADSPV*RSSVSS
Trigger: GGAGCTGACTGATGAACGCAACACGGGAGAGTCCGC...GTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGAAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCGTCTTTTTCCTCCATTaGCTGCTTCAAGCTGAAAGC +
Preference number: 5 (lower is better)
Translates to: RKPRCFPCRSAVRWGQWCVFFLH*LLQAES
Trigger: GCTTTCAGCTTGAAGCAGCAAATGGAGGAAAAAGAC...GCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGAAGTGAAGATGGAGGGGAGATTCCCAAGGCATCCCACAGGCCCCAGCTGCAGCTCATCCTTAGACTCTaGAGAAGAAATGTCCTGAAG +
Preference number: 5 (lower is better)
Translates to: RSEDGGEIPKASHRPQLQLILRL*RRNVLK
Trigger: CTTCAGGACATTTCTTCTCAAGAGTCTAAGGATGAG...CTGCAGCTGGGGCCTGTGGGATGCCTTGGGAATCTCCCCTCCATCTTCACTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCTCTCATCCTTAGACTCTaGAGAAGAAATGTCCTGAAG +
Preference number: 5 (lower is better)
Translates to: AMAEGKGDGKQVQHQVLPLILRL*RRNVLK
Trigger: CTTCAGGACATTTCTTCTCAAGAGTCTAAGGATGAG...AGGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACTGCCCTCATCCTTAGACTCTaGAGAAGAAATGTCCTGAAG +
Preference number: 5 (lower is better)
Translates to: SNGRREGGWQTGPAPGTALILRL*RRNVLK
Trigger: CTTCAGGACATTTCTTCTCAAGAGTCTAAGGATGAG...GGCAGTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AAAGCCAAGGTGTTTTCCATGCAGATCGGCAGTCAGGTGGGGGCAGTGGTGCCCCTCATCCTTAGACTCTaGAGAAGAAATGTCCTGAAG +
Preference number: 5 (lower is better)
Translates to: KAKVFSMQIGSQVGAVVPLILRL*RRNVLK
Trigger: CTTCAGGACATTTCTTCTCAAGAGTCTAAGGATGAG...GGGCACCACTGCCCCCACCTGACTGCCGATCTGCATGGAAAACACCTTGGCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGTACAAAGCAATGTCCTCTTCCTGGTCCTaGACCTTGGCCTCCAAGTCC +
Preference number: 5 (lower is better)
Translates to: LTSIRSTGRAQPNEYKAMSSSWS*TLASKS
Trigger: GGACTTGGAGGCCAAGGTCAAGGACCAGGAAGAGGA...CATTGCTTTGTACTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CCGCGGGTGGGTGCAGGTGGAAGAGATCAGCTCTTAAATAACTGCTCATTGCACCGACTCTCCATCTCCTaGGAATGGGTCTGTCTCATT +
Preference number: 5 (lower is better)
Translates to: PRVGAGGRDQLLNNCSLHRLSIS*EWVCLI
Trigger: AATGAGACAGACCCATTCCAAGGAGATGGAGAGTCG...GTGCAATGAGCAGTTATTTAAGAGCTGATCTCTTCCACCTGCACCCACCCGCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TTAGGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCTGAGCGTGGAGAGCTaGCTCTCCAGCTCCCGTTTC +
Preference number: 5 (lower is better)
Translates to: LGLQSDKQTKTSTFHCAHLSVES*LSSSRF
Trigger: GAAACGGGAGCTGGAGAGCAAGCTCTCCACGCTCAG...GTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACTCCTCCAGCGCTGTCTaGGCTTTGGCGATGTCATCA +
Preference number: 5 (lower is better)
Translates to: GLQSDKQTKTSTFHCAHHSSSAV*ALAMSS
Trigger: TGATGACATCGCCAAAGCCAAGACAGCGCTGGAGGA...GTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACAGGTCCTCCAGCGCTGTCTaGGCTTTGGCGATGTCATCA +
Preference number: 5 (lower is better)
Translates to: LQSDKQTKTSTFHCAHHRSSSAV*ALAMSS
Trigger: TGATGACATCGCCAAAGCCAAGACAGCGCTGGAGGA...CCTGTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GAAGGGGCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCTTCTCCATGGTTTCTTaGAGCCGACTGGCCAGGTTC +
Preference number: 5 (lower is better)
Translates to: EGAFYFLTSIRSTGRAQPFSMVS*SRLARF
Trigger: GAACCTGGCCAGTCGGCTCAAAGAAACCATGGAGAA...GGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGCCCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS GCA 90 bp TCTTTCTTTCGCTGCTTCTCTTCCTTCTTTGACCGTCTTGGAGTTTaGCCCGCTTCCTCAACGTCTGTGGTTGGGCCCTTTTTCACACTG +
Preference number: 5 (lower is better)
Translates to: SFFRCFSSFFDRLGV*PASSTSVVGPFFTL
Trigger: CAGTGTGAAAAAGGGCCCAACCACAGACGTTGAGGAAGCGGGGCAAACTCCAAGACGGTCAAAGAAGGAAGAGAAGCAGCGAAAGAAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS-3UTR CAA 90 bp TTAGGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACGAGTGCTGGCTGGACTaGAGAGCCCTGTTTACCAGG +
Preference number: 5 (lower is better)
Translates to: LGLQSDKQTKTSTFHCAHECWLD*RALFTR
Trigger: CCTGGTAAACAGGGCTCTCAAGTCCAGCCAGCACTC...GTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TTAGGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACAGCCAGCCAGCCACGTaGTACTCCACCCAGTTGGTA +
Preference number: 5 (lower is better)
Translates to: LGLQSDKQTKTSTFHCAHSQPAT*YSTQLV
Trigger: TACCAACTGGGTGGAGTACAACGTGGCTGGCTGGCT...GTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACTTACGACCATGTTTCTaGGTCAGGTGTGGAGCCAGG +
Preference number: 5 (lower is better)
Translates to: GLQSDKQTKTSTFHCAHHLRPCF*VRCGAR
Trigger: CCTGGCTCCACACCTGACCAAGAAACATGGTCGTAA...GTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGTACAAAGCAATGCTGCTGCAGTGCCCGTaGACTCTCATCACTATCTGC +
Preference number: 5 (lower is better)
Translates to: LTSIRSTGRAQPNEYKAMLLQCP*TLITIC
Trigger: GCAGATAGTGATGAGAGTCAACGGGCACTGCAGCAG...CATTGCTTTGTACTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACCTCAGCTGTGAGCCTTaGGCACTTCTTCTTGAGCTG +
Preference number: 5 (lower is better)
Translates to: GLQSDKQTKTSTFHCAHHLSCEP*ALLLEL
Trigger: CAGCTCAAGAAGAAGTGCCAAAGGCTCACAGCTGAG...GTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGTGGGCCACAGCTGCCTaGTGCTTCTTCATCAGCTCA +
Preference number: 5 (lower is better)
Translates to: AFYFLTSIRSTGRAQPNEWATAA*CFFISS
Trigger: TGAGCTGATGAAGAAGCACAAGGCAGCTGTGGCCCA...CTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGTACAAAGCAATGTGGGCCACAGCTGCCTaGTGCTTCTTCATCAGCTCA +
Preference number: 5 (lower is better)
Translates to: LTSIRSTGRAQPNEYKAMWATAA*CFFISS
Trigger: TGAGCTGATGAAGAAGCACAAGGCAGCTGTGGCCCA...CATTGCTTTGTACTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACAGGCTCATCCCGGCTCCGTaGAGAGAAGGAAAAACGTTT +
Preference number: 5 (lower is better)
Translates to: LQSDKQTKTSTFHCAHHRLIPAP*REGKTF
Trigger: AAACGTTTTTCCTTCTCTCAACGGAGCCGGGATGAG...CCTGTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
CDS-3UTR CAA 90 bp ACAAAGCAATGGCAGAAGGGAAGGGGGATGGCAAACAGGTCCAGCACCAGGTACACAATTCCAAACACATaGTTCTCTGCCAAGTGGTTC +
Preference number: 5 (lower is better)
Translates to: TKQWQKGRGMANRSSTRYTIPNT*FSAKWF
Trigger: GAACCACTTGGCAGAGAACAATGTGTTTGGAATTGT...GTACCTGGTGCTGGACCTGTTTGCCATCCCCCTTCCCTTCTGCCATTGCTTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGTACAAAGCAATGTGCTTCTCCTCAGGCTaGGACAGTGGCACAATTCCA +
Preference number: 5 (lower is better)
Translates to: LTSIRSTGRAQPNEYKAMCFSSG*DSGTIP
Trigger: TGGAATTGTGCCACTGTCCAAGCCTGAGGAGAAGCA...CATTGCTTTGTACTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGCTCAGCTGTGAGCCTTaGGCACTTCTTCTTGAGCTG +
Preference number: 5 (lower is better)
Translates to: AFYFLTSIRSTGRAQPNELSCEP*ALLLEL
Trigger: CAGCTCAAGAAGAAGTGCCAAAGGCTCACAGCTGAG...CTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGTGGGCAATCTCCCTCTaGCTCGGGGCATTGTTCTTT +
Preference number: 5 (lower is better)
Translates to: AFYFLTSIRSTGRAQPNEWAISL*LGALFF
Trigger: AAAGAACAATGCCCCGAGCAAGAGGGAGATTGCCCA...CTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TTAGGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACTCCTCCAGCGCTGTCTaGGCTTTGGCGATGTCATCA +
Preference number: 5 (lower is better)
Translates to: LGLQSDKQTKTSTFHCAHSSSAV*ALAMSS
Trigger: TGATGACATCGCCAAAGCCAAGACAGCGCTGGAGGA...GTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TCTGGGGTAAGTGTGTGGGGACAGGGTTATGGGCAGAAGAAAGATGACAAAGGGCTCTTCCAGCCGGTTTaGAATCTCGTTTTTCTCACG +
Preference number: 5 (lower is better)
Translates to: SGVSVWGQGYGQKKDDKGLFQPV*NLVFLT
Trigger: CGTGAGAAAAACGAGATTCAAAACCGGCTGGAAGAG...CCCTTTGTCATCTTTCTTCTGCCCATAACCCTGTCCCCACACACTTACCCCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACATCCTCAATGGCAGCTaGCAAGTCCCCAATGCGTTT +
Preference number: 5 (lower is better)
Translates to: GLQSDKQTKTSTFHCAHHILNGS*QVPNAF
Trigger: AAACGCATTGGGGACTTGCAAGCTGCCATTGAGGAT...GTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACGCCTTAGAAGGTCCCTaGTTCTTTGACAACCAGGAC +
Preference number: 5 (lower is better)
Translates to: GLQSDKQTKTSTFHCAHHALEGP*FFDNQD
Trigger: GTCCTGGTTGTCAAAGAACAAGGGACCTTCTAAGGC...GTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS CCA 90 bp TCTGCAGAGCTTGTAGCTTCTCCTGTAGCTCTTGCTTCTCCTTGTTaGACTCTTCAATCTGAGCCTGGAGATCGTTCATCTGTGCCATGT +
Preference number: 5 (lower is better)
Translates to: SAELVASPVALASPC*TLQSEPGDRSSVPC
Trigger: ACATGGCACAGATGAACGATCTCCAGGCTCAGATTGAAGAGTCCAACAAGGAGAAGCAAGAGCTACAGGAGAAGCTACAAGCTCTGCAGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACAGGTTCCGCCCGCCATCTTaGTCCTTATCTTTCTTCATG +
Preference number: 5 (lower is better)
Translates to: LQSDKQTKTSTFHCAHHRFRPPS*SLSFFM
Trigger: CATGAAGAAAGATAAGGACAAAGATGGCGGGCGGAA...CCTGTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
CDS-3UTR CAA 90 bp TCTGGGGTAAGTGTGTGGGGACAGGGTTATGGGCAGAAGAAAGATGACAAAGGGTCTATGTTATCCTCCTaGTATCTCTCCAACTCCTGG +
Preference number: 5 (lower is better)
Translates to: SGVSVWGQGYGQKKDDKGSMLSS*YLSNSW
Trigger: CCAGGAGTTGGAGAGATACAAGGAGGATAACATAGA...CCCTTTGTCATCTTTCTTCTGCCCATAACCCTGTCCCCACACACTTACCCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGCTTTATGGTAAGAAACCGAGAAGTAACAAGTAACAGACCACTTGTTGCTGTGGTGGTCTGGGTAACCTaGGCGGTACATGCGCATCGC +
Preference number: 5 (lower is better)
Translates to: SFMVRNREVTSNRPLVAVVVWVT*AVHAHR
Trigger: GCGATGCGCATGTACCGCCAAGGTTACCCAGACCAC...CACAGCAACAAGTGGTCTGTTACTTGTTACTTCTCGGTTTCTTACCATAAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCACAGGCAGTCCTTCACCCCCTaGTTCTTCTTGATGTTCTTC +
Preference number: 5 (lower is better)
Translates to: LQSDKQTKTSTFHCAHHRQSFTP*FFLMFF
Trigger: GAAGAACATCAAGAAGAACAAGGGGGTGAAGGACTG...CCTGTGGTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp CTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGTACAAAGCAATGTGGATCTCCTCGTCTTaGTTTCGGATCTGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: LTSIRSTGRAQPNEYKAMWISSS*FRICSS
Trigger: AGAGGAGCAGATCCGAAACAAAGACGAGGAGATCCA...CATTGCTTTGTACTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGCTTTATGGTAAGAAACCGAGAAGTAACAAGTAACAGACCACTTGTTGCTGTGGCGGACTCTCCCGTGTaGCGTTCATCAGTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: SFMVRNREVTSNRPLVAVADSPV*RSSVSS
Trigger: GGAGCTGACTGATGAACGCAACACGGGAGAGTCCGC...CACAGCAACAAGTGGTCTGTTACTTGTTACTTCTCGGTTTCTTACCATAAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp TTAGGACTCCAGTCTGATAAACAGACCAAAACATCTACCTTCCACTGTGCCCACCTCAGCTGTGAGCCTTaGGCACTTCTTCTTGAGCTG +
Preference number: 5 (lower is better)
Translates to: LGLQSDKQTKTSTFHCAHLSCEP*ALLLEL
Trigger: CAGCTCAAGAAGAAGTGCCAAAGGCTCACAGCTGAG...GTGGGCACAGTGGAAGGTAGATGTTTTGGTCTGTTTATCAGACTGGAGTCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGATCCTCAATGGCAGCTaGCAAGTCCCCAATGCGTTT +
Preference number: 5 (lower is better)
Translates to: AFYFLTSIRSTGRAQPNEILNGS*QVPNAF
Trigger: AAACGCATTGGGGACTTGCAAGCTGCCATTGAGGAT...CTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGGCCTTAGAAGGTCCCTaGTTCTTTGACAACCAGGAC +
Preference number: 5 (lower is better)
Translates to: AFYFLTSIRSTGRAQPNEALEGP*FFDNQD
Trigger: GTCCTGGTTGTCAAAGAACAAGGGACCTTCTAAGGC...CTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp GCCTTTTATTTCCTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGTTCCGCCCGCCATCTTaGTCCTTATCTTTCTTCATG +
Preference number: 5 (lower is better)
Translates to: AFYFLTSIRSTGRAQPNEFRPPS*SLSFFM
Trigger: CATGAAGAAAGATAAGGACAAAGATGGCGGGCGGAA...CTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAGGAAATAAAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
CDS-3UTR CAA 90 bp CTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGTACAAAGCAATGCTCTTCCAGCCGGTTTaGAATCTCGTTTTTCTCACG +
Preference number: 5 (lower is better)
Translates to: LTSIRSTGRAQPNEYKAMLFQPV*NLVFLT
Trigger: CGTGAGAAAAACGAGATTCAAAACCGGCTGGAAGAG...CATTGCTTTGTACTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGCTTTATGGTAAGAAACCGAGAAGTAACAAGTAACAGACCACTTGTTGCTGTGCTGCCTTCTTCACCCTaGAGGTCATCACTGGAGCTG +
Preference number: 5 (lower is better)
Translates to: SFMVRNREVTSNRPLVAVLPSSP*RSSLEL
Trigger: CAGCTCCAGTGATGACCTCAAGGGTGAAGAAGGCAG...CACAGCAACAAGTGGTCTGTTACTTGTTACTTCTCGGTTTCTTACCATAAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
CDS-3UTR CAA 90 bp CTTACATCAATCAGGTCCACAGGGAGAGCACAGCCCAATGAGTACAAAGCAATGTCTATGTTATCCTCCTaGTATCTCTCCAACTCCTGG +
Preference number: 5 (lower is better)
Translates to: LTSIRSTGRAQPNEYKAMSMLSS*YLSNSW
Trigger: CCAGGAGTTGGAGAGATACAAGGAGGATAACATAGA...CATTGCTTTGTACTCATTGGGCTGTGCTCTCCCTGTGGACCTGATTGATGTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGCTTTATGGTAAGAAACCGAGAAGTAACAAGTAACAGACCACTTGTTGCTGTGCTCTTCCAGCCGGTTTaGAATCTCGTTTTTCTCACG +
Preference number: 5 (lower is better)
Translates to: SFMVRNREVTSNRPLVAVLFQPV*NLVFLT
Trigger: CGTGAGAAAAACGAGATTCAAAACCGGCTGGAAGAG...CACAGCAACAAGTGGTCTGTTACTTGTTACTTCTCGGTTTCTTACCATAAAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGCTTTATGGTAAGAAACCGAGAAGTAACAAGTAACAGACCACTTGTTGCTGTGTCTATGTTATCCTCCTaGTATCTCTCCAACTCCTGG +
Preference number: 5 (lower is better)
Translates to: SFMVRNREVTSNRPLVAVSMLSS*YLSNSW
Trigger: CCAGGAGTTGGAGAGATACAAGGAGGATAACATAGA...CACAGCAACAAGTGGTCTGTTACTTGTTACTTCTCGGTTTCTTACCATAAAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS-3UTR CAA 90 bp AGCTTTATGGTAAGAAACCGAGAAGTAACAAGTAACAGACCACTTGTTGCTGTGCTCATCCTTAGACTCTaGAGAAGAAATGTCCTGAAG +
Preference number: 5 (lower is better)
Translates to: SFMVRNREVTSNRPLVAVLILRL*RRNVLK
Trigger: CTTCAGGACATTTCTTCTCAAGAGTCTAAGGATGAG...CACAGCAACAAGTGGTCTGTTACTTGTTACTTCTCGGTTTCTTACCATAAAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000167856.8
ENSMUST00000172303.10
CDS GCA 72 bp TCCTGGCTGGGGGCCTTCTCCCCTTTCCCAGGAGGCTaGTTGCCGCGGGACTTGTGGTCCTTGCCTCGGCCC +
Preference number: 6 (lower is better)
Translates to: SWLGAFSPFPGG*LPRDLWSLPRP
Trigger: GGGCCGAGGCAAGGACCACAAGTCCCGCGGCAAGCAGCCTCCTGGGAAAGGGGAGAAGGCCCCCAGCCAGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000151373.4
CDS CCA 72 bp CCCACTCATCCAGGCAGCTCTGGCCGAGGGATAGCCTaGAGTCAGGGCTCTCCCGACCCAGGCCTGAGGCCC +
Preference number: 6 (lower is better)
Translates to: PTHPGSSGRGIA*SQGSPDPGLRP
Trigger: GGGCCTCAGGCCTGGGTCGGGAGAGCCCTGACTCCAGGCTATCCCTCGGCCAGAGCTGCCTGGATGAGTGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS CCA 72 bp GGCAGAGGCAGAGCGGCGGATGCTGCTGCCCCTCTCTaGGTGCTCCAGCTGTGCGCTCCGGGCACTCTGGAT +
Preference number: 6 (lower is better)
Translates to: GRGRAADAAAPL*VLQLCAPGTLD
Trigger: ATCCAGAGTGCCCGGAGCGCACAGCTGGAGCACCCAGAGAGGGGCAGCAGCATCCGCCGCTCTGCCTCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS GCA 72 bp GGGAAGAGACATCTGCGGCAGAGGCAGAGCGGCGGATaGTGCTGCCCCTCTCTGGGTGCTCCAGCTGTGCGC +
Preference number: 6 (lower is better)
Translates to: GKRHLRQRQSGG*CCPSLGAPAVR
Trigger: GCGCACAGCTGGAGCACCCAGAGAGGGGCAGCAGCATCCGCCGCTCTGCCTCTGCCGCAGATGTCTCTTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS CAA 72 bp CCACCCGCTTCCGGGACAGGCCTTGGGCCTCTTCATTaGGGCCCTCGGCTGAGGCAGCCCCTAGGCCGTTCA +
Preference number: 6 (lower is better)
Translates to: PPASGTGLGPLH*GPRLRQPLGRS
Trigger: TGAACGGCCTAGGGGCTGCCTCAGCCGAGGGCCCAAATGAAGAGGCCCAAGGCCTGTCCCGGAAGCGGGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151373.4
CDS GCA 72 bp CAATCTGCTCTTCCGTCTTGGCATCAGCCGGCTCCCTaGGGTGTCCCTCGCCAGTCCGAAGCCAGCTCCGGC +
Preference number: 6 (lower is better)
Translates to: QSALPSWHQPAP*GVPRQSEASSG
Trigger: GCCGGAGCTGGCTTCGGACTGGCGAGGGACACCGCAGGGAGCCGGCTGATGCCAAGACGGAAGAGCAGATTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
CDS GCA 72 bp AAGAGACATCTGCGGCAGAGGCAGAGCGGCGGATGCTaGTGCCCCTCTCTGGGTGCTCCAGCTGTGCGCTCC +
Preference number: 6 (lower is better)
Translates to: KRHLRQRQSGGC*CPSLGAPAVRS
Trigger: GGAGCGCACAGCTGGAGCACCCAGAGAGGGGCAGCAGCATCCGCCGCTCTGCCTCTGCCGCAGATGTCTCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS GCA 72 bp TCCCAGGAGGCTGCTTGCCGCGGGACTTGTGGTCCTTaGCTCGGCCCCGAGACATCAGACTGCGCAGGCCTA +
Preference number: 6 (lower is better)
Translates to: SQEAACRGTCGP*LGPETSDCAGL
Trigger: TAGGCCTGCGCAGTCTGATGTCTCGGGGCCGAGGCAAGGACCACAAGTCCCGCGGCAAGCAGCCTCCTGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151373.4
CDS CCA 72 bp GTCCGGAGCCTCTCGGCTGTCTCCGCGTCCAGCAGCTaGGAGGCGGACTCTCCCGTGTTGCGTTCATCAGTC +
Preference number: 6 (lower is better)
Translates to: VRSLSAVSASSS*EADSPVLRSSV
Trigger: GACTGATGAACGCAACACGGGAGAGTCCGCCTCCCAGCTGCTGGACGCGGAGACAGCCGAGAGGCTCCGGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CCA 72 bp TCCCCTTTCCCAGGAGGCTGCTTGCCGCGGGACTTGTaGTCCTTGCCTCGGCCCCGAGACATCAGACTGCGC +
Preference number: 6 (lower is better)
Translates to: SPFPGGCLPRDL*SLPRPRDIRLR
Trigger: GCGCAGTCTGATGTCTCGGGGCCGAGGCAAGGACCACAAGTCCCGCGGCAAGCAGCCTCCTGGGAAAGGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151373.4
CDS CAA 72 bp TTCCCAGGAGGCTGCTTGCCGCGGGACTTGTGGTCCTaGCCTCGGCCCCGAGACATCAGACTGCGCAGGCCT +
Preference number: 6 (lower is better)
Translates to: FPGGCLPRDLWS*PRPRDIRLRRP
Trigger: AGGCCTGCGCAGTCTGATGTCTCGGGGCCGAGGCAAGGACCACAAGTCCCGCGGCAAGCAGCCTCCTGGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151373.4
CDS CAA 72 bp TCACCCGCTTCCGGGACAGGCCTTGGGCCTCTTCATTaGGGCCCTCGGCTGAGGCAGCCCCTAGGCCGTTCA +
Preference number: 6 (lower is better)
Translates to: SPASGTGLGPLH*GPRLRQPLGRS
Trigger: TGAACGGCCTAGGGGCTGCCTCAGCCGAGGGCCCAAATGAAGAGGCCCAAGGCCTGTCCCGGAAGCGGGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000167856.8
CDS CAA 90 bp CCCGACCCAGGCCTGAGGCCCGGTTCCAGGAAGGGCTTATGGCGCTaGACAAGCTATCAAGCCTGGATGTGCTACGGCGGCGGGAGCTGG +
Preference number: 6 (lower is better)
Translates to: PDPGLRPGSRKGLWR*TSYQAWMCYGGGSW
Trigger: CCAGCTCCCGCCGCCGTAGCACATCCAGGCTTGATAGCTTGTCAAGCGCCATAAGCCCTTCCTGGAACCGGGCCTCAGGCCTGGGTCGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS TCA 72 bp GCCTTTCAGGAGAGGTGGCACGCTCACTCAGGGTGGTaGGGAGCGAGTCCTGGTCTCCAGTGCCCCCGATGG +
Preference number: 6 (lower is better)
Translates to: AFQERWHAHSGW*GASPGLQCPRW
Trigger: CCATCGGGGGCACTGGAGACCAGGACTCGCTCCTCACCACCCTGAGTGAGCGTGCCACCTCTCCTGAAAGGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS CCA 72 bp ACCAGGCCTCTTCAGCGGCAATCTGCTCTTCCGTCTTaGCATCAGCCGGCTCCCTGCGGTGTCCCTCGCCAG +
Preference number: 6 (lower is better)
Translates to: TRPLQRQSALPS*HQPAPCGVPRQ
Trigger: CTGGCGAGGGACACCGCAGGGAGCCGGCTGATGCCAAGACGGAAGAGCAGATTGCCGCTGAAGAGGCCTGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
CDS CCA 72 bp GTGGCACGCTCACTCAGGGTGGTGAGGAGCGAGTCCTaGTCTCCAGTGCCCCCGATGGAGTCCTTCAGGGTG +
Preference number: 6 (lower is better)
Translates to: VARSLRVVRSES*SPVPPMESFRV
Trigger: CACCCTGAAGGACTCCATCGGGGGCACTGGAGACCAGGACTCGCTCCTCACCACCCTGAGTGAGCGTGCCAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS CCA 72 bp CCGAGCACAGACGCCAGCCCAGGTACAGGGTGGGGGTaGTGGGTTGTCACTGGAGAAAGCAGAGGGCTCCTG +
Preference number: 6 (lower is better)
Translates to: PSTDASPGTGWG*WVVTGESRGLL
Trigger: CAGGAGCCCTCTGCTTTCTCCAGTGACAACCCACCACCCCCACCCTGTACCTGGGCTGGCGTCTGTGCTCGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000168348.8
CDS CAA 90 bp GTAGCCCCGGCAGGCTGCCTGGAACAGGGTCAGGTGCCTGCTGGTTaGCTCGTCTCGTTGTTCTTCCAACCGTGCCAACGTGCCTGCCCG +
Preference number: 6 (lower is better)
Translates to: VAPAGCLEQGQVPAG*LVSLFFQPCQRACP
Trigger: CGGGCAGGCACGTTGGCACGGTTGGAAGAACAACGAGACGAGCAAACCAGCAGGCACCTGACCCTGTTCCAGGCAGCCTGCCGGGGCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CAA 90 bp GAGGCAGCCCCTAGGCCGTTCATAGTGAGCGTGGGTTCGGGACTCTaGGCTGTCTGGGAAGTCTCTGAGGGTACCGGGCTGGTGGCAGGC +
Preference number: 6 (lower is better)
Translates to: EAAPRPFIVSVGSGL*AVWEVSEGTGLVAG
Trigger: GCCTGCCACCAGCCCGGTACCCTCAGAGACTTCCCAGACAGCCAAGAGTCCCGAACCCACGCTCACTATGAACGGCCTAGGGGCTGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000151373.4
ENSMUST00000167856.8
CDS CAA 90 bp TTCTCCCCTTTCCCAGGAGGCTGCTTGCCGCGGGACTTGTGGTCCTaGCCTCGGCCCCGAGACATCAGACTGCGCAGGCCTACAGAGAGC +
Preference number: 6 (lower is better)
Translates to: FSPFPGGCLPRDLWS*PRPRDIRLRRPTES
Trigger: GCTCTCTGTAGGCCTGCGCAGTCTGATGTCTCGGGGCCGAGGCAAGGACCACAAGTCCCGCGGCAAGCAGCCTCCTGGGAAAGGGGAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151373.4
CDS TCA 72 bp CTTCTCCAGACCCCGGCCAGGGCGGCTCCCAACCCCTaGGAAGATGGAGCTACAATCGTCCAGCTCCTCGCA +
Preference number: 6 (lower is better)
Translates to: LLQTPARAAPNP*EDGATIVQLLA
Trigger: TGCGAGGAGCTGGACGATTGTAGCTCCATCTTCTCAGGGGTTGGGAGCCGCCCTGGCCGGGGTCTGGAGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS GCA 72 bp GGACTCAACCGGACCTCGGGGTCAGCTCCTGTCTCCTaGTGCACGTCAGAGGCTGGTGACTTGGCCTGCTGT +
Preference number: 6 (lower is better)
Translates to: GLNRTSGSAPVS*CTSEAGDLACC
Trigger: ACAGCAGGCCAAGTCACCAGCCTCTGACGTGCAGCAGGAGACAGGAGCTGACCCCGAGGTCCGGTTGAGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151373.4
CDS CCA 72 bp AGTCCGAAGCCAGCTCCGGCTCAGCTCGCTAAGCTCTaGGATGGGCTGTACCTTGAGCCGCACACTGTCCCC +
Preference number: 6 (lower is better)
Translates to: SPKPAPAQLAKL*DGLYLEPHTVP
Trigger: GGGGACAGTGTGCGGCTCAAGGTACAGCCCATCCCAGAGCTTAGCGAGCTGAGCCGGAGCTGGCTTCGGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130627.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS CCA 72 bp CCAGGCCGCTCTCCTCAGGGCCCTGACGGAAGGAGGTaGACCGTTGCAGGGTGCCTCCTTTTAGCTGGTGTT +
Preference number: 6 (lower is better)
Translates to: PGRSPQGPDGRR*TVAGCLLLAGV
Trigger: AACACCAGCTAAAAGGAGGCACCCTGCAACGGTCCACCTCCTTCCGTCAGGGCCCTGAGGAGAGCGGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CCA 72 bp TCGGCATGGGCCAGTGAGCGAACCAGGTGGGAAGCCTaGTCCACAGCAGCCACGGAGTCATCTGCAACTGGC +
Preference number: 6 (lower is better)
Translates to: SAWASERTRWEA*STAATESSATG
Trigger: GCCAGTTGCAGATGACTCCGTGGCTGCTGTGGACCAGGCTTCCCACCTGGTTCGCTCACTGGCCCATGCCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CCA 72 bp TCCAGGAGCCACAGTAGCCCTCTTGCCTCATCGGCATaGGCCAGTGAGCGAACCAGGTGGGAAGCCTGGTCC +
Preference number: 6 (lower is better)
Translates to: SRSHSSPLASSA*ASERTRWEAWS
Trigger: GGACCAGGCTTCCCACCTGGTTCGCTCACTGGCCCATGCCGATGAGGCAAGAGGGCTACTGTGGCTCCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CCA 72 bp GTTTTCCTCATGCTGGTTGCCCGGCGCAAGGCCAGCTaGGAGCCACCTTCCAGGCCTGCAATCGAGCCTGAG +
Preference number: 6 (lower is better)
Translates to: VFLMLVARRKAS*EPPSRPAIEPE
Trigger: CTCAGGCTCGATTGCAGGCCTGGAAGGTGGCTCCCAGCTGGCCTTGCGCCGGGCAACCAGCATGAGGAAAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CCA 72 bp ATGCGCATCGCATCAAGCAGGCGGGATCCCCGGAGCTaGGCTCGGAGCAGGGACACATCCAGTTGTAGCAGC +
Preference number: 6 (lower is better)
Translates to: MRIASSRRDPRS*ARSRDTSSCSS
Trigger: GCTGCTACAACTGGATGTGTCCCTGCTCCGAGCCCAGCTCCGGGGATCCCGCCTGCTTGATGCGATGCGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CCA 72 bp ATGACAGAGGCTGAGGCTGAGGAAGAGCCCCGTGGCTaGGGTGGCACAGACAGGCTTCGGGCCAGTGATGGA +
Preference number: 6 (lower is better)
Translates to: MTEAEAEEEPRG*GGTDRLRASDG
Trigger: TCCATCACTGGCCCGAAGCCTGTCTGTGCCACCCCAGCCACGGGGCTCTTCCTCAGCCTCAGCCTCTGTCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS CAA 72 bp TACCAGGCCTCTTCAGCGGCAATCTGCTCTTCCGTCTaGGCATCAGCCGGCTCCCTGCGGTGTCCCTCGCCA +
Preference number: 6 (lower is better)
Translates to: YQASSAAICSSV*ASAGSLRCPSP
Trigger: TGGCGAGGGACACCGCAGGGAGCCGGCTGATGCCAAGACGGAAGAGCAGATTGCCGCTGAAGAGGCCTGGTA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
CDS CAA 72 bp TTCTCCCCTTTCCCAGGAGGCTGCTTGCCGCGGGACTaGTGGTCCTTGCCTCGGCCCCGAGACATCAGACTG +
Preference number: 6 (lower is better)
Translates to: FSPFPGGCLPRD*WSLPRPRDIRL
Trigger: CAGTCTGATGTCTCGGGGCCGAGGCAAGGACCACAAGTCCCGCGGCAAGCAGCCTCCTGGGAAAGGGGAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151373.4
CDS CAA 90 bp CCTGGAGGCTCCTTGGCAGTCCCAGGCTCCTCACCAGGCAGTACTTaGCTGACCACCTTCCTCACTGCATTCGCCACCCGCTTCCGGGAC +
Preference number: 6 (lower is better)
Translates to: PGGSLAVPGSSPGST*LTTFLTAFATRFRD
Trigger: GTCCCGGAAGCGGGTGGCGAATGCAGTGAGGAAGGTGGTCAGCAAAGTACTGCCTGGTGAGGAGCCTGGGACTGCCAAGGAGCCTCCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151373.4
CDS CAA 90 bp GCTGCCCGCTGCAGCACAGAGCCCCGGAAGCTGCCTTCTTCACCCTaGAGGTCATCACTGGAGCTGGCTGTGCTTAGGTGTCCTGAGTCC +
Preference number: 6 (lower is better)
Translates to: AARCSTEPRKLPSSP*RSSLELAVLRCPES
Trigger: GGACTCAGGACACCTAAGCACAGCCAGCTCCAGTGATGACCTCAAGGGTGAAGAAGGCAGCTTCCGGGGCTCTGTGCTGCAGCGGGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130627.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS CAA 90 bp GCACCTCTACCTGAGGTGATGGGGCTGCAGAGTGCTCTGAGGGGGTaGAGGTCTCCGAGGCACTCTCATCCCGGCTCCGTTGAGAGAAGG +
Preference number: 6 (lower is better)
Translates to: APLPEVMGLQSALRG*RSPRHSHPGSVERR
Trigger: CCTTCTCTCAACGGAGCCGGGATGAGAGTGCCTCGGAGACCTCAACCCCCTCAGAGCACTCTGCAGCCCCATCACCTCAGGTAGAGGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130627.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS CAA 90 bp TCGGCTGTCTCCGCGTCCAGCAGCTGGGAGGCGGACTCTCCCGTGTaGCGTTCATCAGTCAGCTCCGATGTCAGTTCTGAGATCCGGGTC +
Preference number: 6 (lower is better)
Translates to: SAVSASSSWEADSPV*RSSVSSDVSSEIRV
Trigger: GACCCGGATCTCAGAACTGACATCGGAGCTGACTGATGAACGCAACACGGGAGAGTCCGCCTCCCAGCTGCTGGACGCGGAGACAGCCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS TCA 72 bp TGGGAAGTCTCTGAGGGTACCGGGCTGGTGGCAGGCTaGGGACTCCTAGGTGGAGCACTGCCGTCCTTAGAG +
Preference number: 6 (lower is better)
Translates to: WEVSEGTGLVAG*GLLGGALPSLE
Trigger: CTCTAAGGACGGCAGTGCTCCACCTAGGAGTCCTCAGCCTGCCACCAGCCCGGTACCCTCAGAGACTTCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000151373.4
ENSMUST00000167856.8
CDS TCA 72 bp AGATGTGGGGTGCCATGTCCTCCCGCCGACACCCCTTaGACATGTGCATCACCCGCTTCCGGGACAGGCCTT +
Preference number: 6 (lower is better)
Translates to: RCGVPCPPADTP*TCASPASGTGL
Trigger: AAGGCCTGTCCCGGAAGCGGGTGATGCACATGTTCAAGGGGTGTCGGCGGGAGGACATGGCACCCCACATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000167856.8
CDS GCA 72 bp AAGCCTGACCCTCAGGGGCCCGATCCAGCATGGTTGTaGGCCGCAGTGAGAAGCCAAAGTCTCCTGTGGGTC +
Preference number: 6 (lower is better)
Translates to: KPDPQGPDPAWL*AAVRSQSLLWV
Trigger: GACCCACAGGAGACTTTGGCTTCTCACTGCGGCGCACAACCATGCTGGATCGGGCCCCTGAGGGTCAGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130627.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS GCA 72 bp CTGGGTGCTCCAGCTGTGCGCTCCGGGCACTCTGGATaGTCTTCCGGTCATCATCCTCAGAGTCAGGCTCCA +
Preference number: 6 (lower is better)
Translates to: LGAPAVRSGHSG*SSGHHPQSQAP
Trigger: TGGAGCCTGACTCTGAGGATGATGACCGGAAGAGCATCCAGAGTGCCCGGAGCGCACAGCTGGAGCACCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS CCA 72 bp CAGCCCAGCAGGTATGCTGCCTTCTGGGCCCATTCGTaGCGGGCAAACTGCTTTCGTCCAGCAGCAACTGCC +
Preference number: 6 (lower is better)
Translates to: QPSRYAAFWAHS*RANCFRPAATA
Trigger: GGCAGTTGCTGCTGGACGAAAGCAGTTTGCCCGCCACGAATGGGCCCAGAAGGCAGCATACCTGCTGGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000000645.13
CDS CCA 72 bp GAGGCTCCACGGGCCGAGCCGCCCCATTCAGGGTTCTaGAAGCCTGGTGTGTCCACGATCATCATGGAACAG +
Preference number: 6 (lower is better)
Translates to: EAPRAEPPHSGF*KPGVSTIIMEQ
Trigger: CTGTTCCATGATGATCGTGGACACACCAGGCTTCCAGAACCCTGAATGGGGCGGCTCGGCCCGTGGAGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CCA 72 bp CTTGCCTCATCGGCATGGGCCAGTGAGCGAACCAGGTaGGAAGCCTGGTCCACAGCAGCCACGGAGTCATCT +
Preference number: 6 (lower is better)
Translates to: LASSAWASERTR*EAWSTAATESS
Trigger: AGATGACTCCGTGGCTGCTGTGGACCAGGCTTCCCACCTGGTTCGCTCACTGGCCCATGCCGATGAGGCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CCA 72 bp CAGCCCAGCAGGTATGCTGCCTTCTGGGCCCATTCGTaGCGGGCAAACTGCTTTCGTCCAGCTTCAGCAGCG +
Preference number: 6 (lower is better)
Translates to: QPSRYAAFWAHS*RANCFRPASAA
Trigger: CGCTGCTGAAGCTGGACGAAAGCAGTTTGCCCGCCACGAATGGGCCCAGAAGGCAGCATACCTGCTGGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172303.10
CDS CAA 72 bp GGCCTGAGGCCCGGTTCCAGGAAGGGCTTATGGCGCTaGACAAGCTATCAAGCCTGGATGTGCTACGGCGGC +
Preference number: 6 (lower is better)
Translates to: GLRPGSRKGLWR*TSYQAWMCYGG
Trigger: GCCGCCGTAGCACATCCAGGCTTGATAGCTTGTCAAGCGCCATAAGCCCTTCCTGGAACCGGGCCTCAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS CAA 90 bp CCACCCGTCGATAAGCCTGACCCTCAGGGGCCCGATCCAGCATGGTaGTGCGCCGCAGTGAGAAGCCAAAGTCTCCTGTGGGTCTTCGTT +
Preference number: 6 (lower is better)
Translates to: PPVDKPDPQGPDPAW*CAAVRSQSLLWVFV
Trigger: AACGAAGACCCACAGGAGACTTTGGCTTCTCACTGCGGCGCACAACCATGCTGGATCGGGCCCCTGAGGGTCAGGCTTATCGACGGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130627.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS CAA 90 bp CTCCAGGAGCATTGTCTGGATGGAGGCCGAAGCCACCTGGCCAGCTaGGTCAAAGTCCAGGGAGAGGATCTGGGAGAAGCGGGTGGCACT +
Preference number: 6 (lower is better)
Translates to: LQEHCLDGGRSHLAS*VKVQGEDLGEAGGT
Trigger: AGTGCCACCCGCTTCTCCCAGATCCTCTCCCTGGACTTTGACCAAGCTGGCCAGGTGGCTTCGGCCTCCATCCAGACAATGCTCCTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CAA 90 bp TCGCTCATCTCCTCCTTGGTGTCACGAAGCTGTCGCTGGAGCCTCTaGTTCTGCTCCTTCTCACGGTTCTCAGCTGCGGCGCGCTGGTCC +
Preference number: 6 (lower is better)
Translates to: SLISSLVSRSCRWSL*FCSFSRFSAAARWS
Trigger: GGACCAGCGCGCCGCAGCTGAGAACCGTGAGAAGGAGCAGAACAAGAGGCTCCAGCGACAGCTTCGTGACACCAAGGAGGAGATGAGCGA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS TCA 72 bp TGGCAGTCCCAGGCTCCTCACCAGGCAGTACTTTGCTaGCCACCTTCCTCACTGCATTCGCCACCCGCTTCC +
Preference number: 6 (lower is better)
Translates to: WQSQAPHQAVLC*PPSSLHSPPAS
Trigger: GGAAGCGGGTGGCGAATGCAGTGAGGAAGGTGGTCAGCAAAGTACTGCCTGGTGAGGAGCCTGGGACTGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151373.4
CDS GCA 72 bp CGTGGTCCTGGTCGAGGAATGCCTAGCCCAGGATGCTaGATTAGCTGTCCCTCAAGCGTCCGCACCTCTACC +
Preference number: 6 (lower is better)
Translates to: RGPGRGMPSPGC*ISCPSSVRTST
Trigger: GGTAGAGGTGCGGACGCTTGAGGGACAGCTAATGCAGCATCCTGGGCTAGGCATTCCTCGACCAGGACCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130627.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS GCA 72 bp GACCGTGGTCCTGGTCGAGGAATGCCTAGCCCAGGATaGTGCATTAGCTGTCCCTCAAGCGTCCGCACCTCT +
Preference number: 6 (lower is better)
Translates to: DRGPGRGMPSPG*CISCPSSVRTS
Trigger: AGAGGTGCGGACGCTTGAGGGACAGCTAATGCAGCATCCTGGGCTAGGCATTCCTCGACCAGGACCACGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130627.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS GCA 72 bp TTCTCCGTCTCATACCAGGCCTCTTCAGCGGCAATCTaGTCTTCCGTCTTGGCATCAGCCGGCTCCCTGCGG +
Preference number: 6 (lower is better)
Translates to: FSVSYQASSAAI*SSVLASAGSLR
Trigger: CCGCAGGGAGCCGGCTGATGCCAAGACGGAAGAGCAGATTGCCGCTGAAGAGGCCTGGTATGAGACGGAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
CDS GCA 72 bp CCGCGTCCAGCAGCTGGGAGGCGGACTCTCCCGTGTTaGGTTCATCAGTCAGCTCCGATGTCAGTTCTGAGA +
Preference number: 6 (lower is better)
Translates to: PRPAAGRRTLPC*VHQSAPMSVLR
Trigger: TCTCAGAACTGACATCGGAGCTGACTGATGAACGCAACACGGGAGAGTCCGCCTCCCAGCTGCTGGACGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS GCA 72 bp GAGCTGCTGCAGTGCCCGTTGACTCTCATCACTATCTaGTTGCAGGTCCCCAAGCCGCCTCTCCAGCTGCCT +
Preference number: 6 (lower is better)
Translates to: ELLQCPLTLITI*LQVPKPPLQLP
Trigger: AGGCAGCTGGAGAGGCGGCTTGGGGACCTGCAAGCAGATAGTGATGAGAGTCAACGGGCACTGCAGCAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS GCA 72 bp TCCAGGCGTGTCTCCAGCTCCCTGATCTTCGCTTCCTaGCTGCTGACGAGGGACTTGTCCACCATGGACTGC +
Preference number: 6 (lower is better)
Translates to: SRRVSSSLIFAS*LLTRDLSTMDC
Trigger: GCAGTCCATGGTGGACAAGTCCCTCGTCAGCAGGCAGGAAGCGAAGATCAGGGAGCTGGAGACACGCCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS GCA 72 bp GAGCCTCTTGTTCTGCTCCTTCTCACGGTTCTCAGCTaGGGCGCGCTGGTCCCGTTCCTCAGTCAGCTTCTC +
Preference number: 6 (lower is better)
Translates to: EPLVLLLLTVLS*GALVPFLSQLL
Trigger: GAGAAGCTGACTGAGGAACGGGACCAGCGCGCCGCAGCTGAGAACCGTGAGAAGGAGCAGAACAAGAGGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS GCA 72 bp TATGCTGCCTTCTGGGCCCATTCGTGGCGGGCAAACTaGTTTCGTCCAGCTTTGGTAGCTCCAGCAGCCCCC +
Preference number: 6 (lower is better)
Translates to: YAAFWAHSWRAN*FRPALVAPAAP
Trigger: GGGGGCTGCTGGAGCTACCAAAGCTGGACGAAAGCAGTTTGCCCGCCACGAATGGGCCCAGAAGGCAGCATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100794.10
CDS GCA 72 bp ACTTGTGGTCCTTGCCTCGGCCCCGAGACATCAGACTaGGCAGGCCTACAGAGAGCTCATCCTTGGCTGCCT +
Preference number: 6 (lower is better)
Translates to: TCGPCLGPETSD*AGLQRAHPWLP
Trigger: AGGCAGCCAAGGATGAGCTCTCTGTAGGCCTGCGCAGTCTGATGTCTCGGGGCCGAGGCAAGGACCACAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151373.4
CDS GCA 72 bp GTCTCCTGCTGCACGTCAGAGGCTGGTGACTTGGCCTaGTGTTTTCCAGAGGGGTTCAACTTCGGGCCAGCC +
Preference number: 6 (lower is better)
Translates to: VSCCTSEAGDLA*CFPEGFNFGPA
Trigger: GGCTGGCCCGAAGTTGAACCCCTCTGGAAAACAGCAGGCCAAGTCACCAGCCTCTGACGTGCAGCAGGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151373.4
CDS CCA 72 bp TCATCTGAGAGTTCTGCTTGGCCAGTGAACCGAACTTaGCTGCCCGCTGCAGCACAGAGCCCCGGAAGCTGC +
Preference number: 6 (lower is better)
Translates to: SSESSAWPVNRT*LPAAAQSPGSC
Trigger: GCAGCTTCCGGGGCTCTGTGCTGCAGCGGGCAGCCAAGTTCGGTTCACTGGCCAAGCAGAACTCTCAGATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130627.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS CCA 72 bp GTCGATAAGCCTGACCCTCAGGGGCCCGATCCAGCATaGTTGTGCGCCGCAGTGAGAAGCCAAAGTCTCCTG +
Preference number: 6 (lower is better)
Translates to: VDKPDPQGPDPA*LCAAVRSQSLL
Trigger: CAGGAGACTTTGGCTTCTCACTGCGGCGCACAACCATGCTGGATCGGGCCCCTGAGGGTCAGGCTTATCGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130627.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS CCA 72 bp GGAGTCCTGCAGAAGCCGGGGTGCATTCTGGGTGGCTaGGTTCTGCTTGGTGTAATTCAGCCAGCCAGCCAC +
Preference number: 6 (lower is better)
Translates to: GVLQKPGCILGG*VLLGVIQPASH
Trigger: GTGGCTGGCTGGCTGAATTACACCAAGCAGAACCCAGCCACCCAGAATGCACCCCGGCTTCTGCAGGACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CCA 72 bp CTCTGCAGCTTCTCCCGCTGCGTCTCCTCGTGGGCCTaGGAAAGCTCACTGTCGAACCTCCTCTGCTTCTTC +
Preference number: 6 (lower is better)
Translates to: LCSFSRCVSSWA*ESSLSNLLCFF
Trigger: GAAGAAGCAGAGGAGGTTCGACAGTGAGCTTTCCCAGGCCCACGAGGAGACGCAGCGGGAGAAGCTGCAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CCA 72 bp CAGCCCAGCAGGTATGCTGCCTTCTGGGCCCATTCGTaGCGGGCAAACTGCTTTCGTCCAGCTTCAGCAGCT +
Preference number: 6 (lower is better)
Translates to: QPSRYAAFWAHS*RANCFRPASAA
Trigger: AGCTGCTGAAGCTGGACGAAAGCAGTTTGCCCGCCACGAATGGGCCCAGAAGGCAGCATACCTGCTGGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS CCA 72 bp TCTGTGGTTGGGCCCTTTTTCACACTGGAGCGGCTATaGCCGGAGACGGTGGAGCCACTGGATGACGAGGAC +
Preference number: 6 (lower is better)
Translates to: SVVGPFFTLERL*PETVEPLDDED
Trigger: GTCCTCGTCATCCAGTGGCTCCACCGTCTCCGGCCATAGCCGCTCCAGTGTGAAAAAGGGCCCAACCACAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS CCA 72 bp TTCATAGTGAGCGTGGGTTCGGGACTCTTGGCTGTCTaGGAAGTCTCTGAGGGTACCGGGCTGGTGGCAGGC +
Preference number: 6 (lower is better)
Translates to: FIVSVGSGLLAV*EVSEGTGLVAG
Trigger: GCCTGCCACCAGCCCGGTACCCTCAGAGACTTCCCAGACAGCCAAGAGTCCCGAACCCACGCTCACTATGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000151373.4
ENSMUST00000167856.8
CDS CAA 72 bp GATAAGCCTGACCCTCAGGGGCCCGATCCAGCATGGTaGTGCGCCGCAGTGAGAAGCCAAAGTCTCCTGTGG +
Preference number: 6 (lower is better)
Translates to: DKPDPQGPDPAW*CAAVRSQSLLW
Trigger: CCACAGGAGACTTTGGCTTCTCACTGCGGCGCACAACCATGCTGGATCGGGCCCCTGAGGGTCAGGCTTATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130627.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS CAA 72 bp TCCGCGTCCAGCAGCTGGGAGGCGGACTCTCCCGTGTaGCGTTCATCAGTCAGCTCCGATGTCAGTTCTGAG +
Preference number: 6 (lower is better)
Translates to: SASSSWEADSPV*RSSVSSDVSSE
Trigger: CTCAGAACTGACATCGGAGCTGACTGATGAACGCAACACGGGAGAGTCCGCCTCCCAGCTGCTGGACGCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CAA 72 bp CTCTCCTCTGGCCCCTTGCCCTCCTTAGGGAGGCTGTaGAGAGCCGTCCTGGAACTCTTCAAGCTGCCATCG +
Preference number: 6 (lower is better)
Translates to: LSSGPLPSLGRL*RAVLELFKLPS
Trigger: CGATGGCAGCTTGAAGAGTTCCAGGACGGCTCTCAACAGCCTCCCTAAGGAGGGCAAGGGGCCAGAGGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS CAA 90 bp AGCCAGCTCCGGCTCAGCTCGCTAAGCTCTGGGATGGGCTGTACCTaGAGCCGCACACTGTCCCCAGACTGCCGGATCATCTCCACAATT +
Preference number: 6 (lower is better)
Translates to: SQLRLSSLSSGMGCT*SRTLSPDCRIISTI
Trigger: AATTGTGGAGATGATCCGGCAGTCTGGGGACAGTGTGCGGCTCAAGGTACAGCCCATCCCAGAGCTTAGCGAGCTGAGCCGGAGCTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130627.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS CAA 90 bp GCGGCGCGCTGGTCCCGTTCCTCAGTCAGCTTCTCCATGGTTTCTTaGAGCCGACTGGCCAGGTTCTCCAGGCGCTTCACTTGGGTCTTT +
Preference number: 6 (lower is better)
Translates to: AARWSRSSVSFSMVS*SRLARFSRRFTWVF
Trigger: AAAGACCCAAGTGAAGCGCCTGGAGAACCTGGCCAGTCGGCTCAAAGAAACCATGGAGAAGCTGACTGAGGAACGGGACCAGCGCGCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CAA 90 bp GAGGAGGGTCTCTCCTCTGGCCCCTTGCCCTCCTTAGGGAGGCTGTaGAGAGCCGTCCTGGAACTCTTCAAGCTGCCATCGTCAGAAGGT +
Preference number: 6 (lower is better)
Translates to: EEGLSSGPLPSLGRL*RAVLELFKLPSSEG
Trigger: ACCTTCTGACGATGGCAGCTTGAAGAGTTCCAGGACGGCTCTCAACAGCCTCCCTAAGGAGGGCAAGGGGCCAGAGGAGAGACCCTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS CAA 90 bp CGGCCCCGAGACATCAGACTGCGCAGGCCTACAGAGAGCTCATCCTaGGCTGCCTCCTTCTTTGTTTCCGGCTTTGGTGGAGCAGGAGGA +
Preference number: 6 (lower is better)
Translates to: RPRDIRLRRPTESSS*AASFFVSGFGGAGG
Trigger: TCCTCCTGCTCCACCAAAGCCGGAAACAAAGAAGGAGGCAGCCAAGGATGAGCTCTCTGTAGGCCTGCGCAGTCTGATGTCTCGGGGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151373.4
CDS TCA 72 bp TGCATTAGCTGTCCCTCAAGCGTCCGCACCTCTACCTaGGGTGATGGGGCTGCAGAGTGCTCTGAGGGGGTT +
Preference number: 6 (lower is better)
Translates to: CISCPSSVRTST*GDGAAECSEGV
Trigger: AACCCCCTCAGAGCACTCTGCAGCCCCATCACCTCAGGTAGAGGTGCGGACGCTTGAGGGACAGCTAATGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130627.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS TCA 72 bp AGAGGATCTGGGAGAAGCGGGTGGCACTGCCATTCATaGTGGTGGGGCTGTTCCCAAAGGCTTCCAGGAGGG +
Preference number: 6 (lower is better)
Translates to: RGSGRSGWHCHS*WWGCSQRLPGG
Trigger: CCCTCCTGGAAGCCTTTGGGAACAGCCCCACCATCATGAATGGCAGTGCCACCCGCTTCTCCCAGATCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS GCA 72 bp GCTCAGGGACTCGAGACCGTGGTCCTGGTCGAGGAATaGCTAGCCCAGGATGCTGCATTAGCTGTCCCTCAA +
Preference number: 6 (lower is better)
Translates to: AQGLETVVLVEE*LAQDAALAVPQ
Trigger: TTGAGGGACAGCTAATGCAGCATCCTGGGCTAGGCATTCCTCGACCAGGACCACGGTCTCGAGTCCCTGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130627.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS GCA 72 bp TTTGCTCGTCTCGTTGTTCTTCCAACCGTGCCAACGTaGCTGCCCGGAAGAACACCCGGCTTAGGCCCAGAC +
Preference number: 6 (lower is better)
Translates to: FARLVVLPTVPT*LPGRTPGLGPD
Trigger: GTCTGGGCCTAAGCCGGGTGTTCTTCCGGGCAGGCACGTTGGCACGGTTGGAAGAACAACGAGACGAGCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS GCA 72 bp CAGGCTGCCTGGAACAGGGTCAGGTGCCTGCTGGTTTaGTCGTCTCGTTGTTCTTCCAACCGTGCCAACGTG +
Preference number: 6 (lower is better)
Translates to: QAAWNRVRCLLV*SSRCSSNRANV
Trigger: CACGTTGGCACGGTTGGAAGAACAACGAGACGAGCAAACCAGCAGGCACCTGACCCTGTTCCAGGCAGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS GCA 72 bp TGTGAAGATCCTCTCAAGTCGCTGGTGTGCCTCCTCTaGAGGACTCAACCGGACCTCGGGGTCAGCTCCTGT +
Preference number: 6 (lower is better)
Translates to: CEDPLKSLVCLL*RTQPDLGVSSC
Trigger: ACAGGAGCTGACCCCGAGGTCCGGTTGAGTCCTGCAGAGGAGGCACACCAGCGACTTGAGAGGATCTTCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151373.4
CDS GCA 72 bp CAGAGAAGCTGTGAAGATCCTCTCAAGTCGCTGGTGTaGCTCCTCTGCAGGACTCAACCGGACCTCGGGGTC +
Preference number: 6 (lower is better)
Translates to: QRSCEDPLKSLV*LLCRTQPDLGV
Trigger: GACCCCGAGGTCCGGTTGAGTCCTGCAGAGGAGGCACACCAGCGACTTGAGAGGATCTTCACAGCTTCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151373.4
CDS GCA 72 bp TTCTCCGTCTCATACCAGGCCTCTTCAGCGGCAATCTaGTCTTCCGTCTTGGCACTCCAGCAGGAGGCCCGA +
Preference number: 6 (lower is better)
Translates to: FSVSYQASSAAI*SSVLALQQEAR
Trigger: TCGGGCCTCCTGCTGGAGTGCCAAGACGGAAGAGCAGATTGCCGCTGAAGAGGCCTGGTATGAGACGGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168348.8
CDS CCA 72 bp CAGCCAGCCACGTTGTACTCCACCCAGTTGGTACCGTaGCTGTGGCCCAGGAGAAAGTGCCGAGGTTTGCTA +
Preference number: 6 (lower is better)
Translates to: QPATLYSTQLVP*LWPRRKCRGLL
Trigger: TAGCAAACCTCGGCACTTTCTCCTGGGCCACAGCCACGGTACCAACTGGGTGGAGTACAACGTGGCTGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CCA 72 bp AATTCAGCCAGCCAGCCACGTTGTACTCCACCCAGTTaGTACCGTGGCTGTGGCCCAGGAGAAAGTGCCGAG +
Preference number: 6 (lower is better)
Translates to: NSASQPRCTPPS*YRGCGPGESAE
Trigger: CTCGGCACTTTCTCCTGGGCCACAGCCACGGTACCAACTGGGTGGAGTACAACGTGGCTGGCTGGCTGAATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CCA 72 bp TCTGGGAGTCCTGCAGAAGCCGGGGTGCATTCTGGGTaGCTGGGTTCTGCTTGGTGTAATTCAGCCAGCCAG +
Preference number: 6 (lower is better)
Translates to: SGSPAEAGVHSG*LGSAWCNSASQ
Trigger: CTGGCTGGCTGAATTACACCAAGCAGAACCCAGCCACCCAGAATGCACCCCGGCTTCTGCAGGACTCCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CCA 72 bp TCATCATCCGATGGGTCAGGGGCGAGTGGCTTCCAGTaGCTGGTTGGGCTGGAACTCTTCAAGCTGCCATCG +
Preference number: 6 (lower is better)
Translates to: SSSDGSGASGFQ*LVGLELFKLPS
Trigger: CGATGGCAGCTTGAAGAGTTCCAGCCCAACCAGCCACTGGAAGCCACTCGCCCCTGACCCATCGGATGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CCA 72 bp CAGCCCAGCAGGTATGCTGCCTTCTGGGCCCATTCGTaGCGGGCAAACTGCTTTCGTCCAGCTTTGGTAGCT +
Preference number: 6 (lower is better)
Translates to: QPSRYAAFWAHS*RANCFRPALVA
Trigger: AGCTACCAAAGCTGGACGAAAGCAGTTTGCCCGCCACGAATGGGCCCAGAAGGCAGCATACCTGCTGGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100794.10
CDS CCA 72 bp GACCCAGGCCTGAGGCCCGGTTCCAGGAAGGGCTTATaGCGCTTGACAAGCTATCAAGCCTGGATGTGCTAC +
Preference number: 6 (lower is better)
Translates to: DPGLRPGSRKGL*RLTSYQAWMCY
Trigger: GTAGCACATCCAGGCTTGATAGCTTGTCAAGCGCCATAAGCCCTTCCTGGAACCGGGCCTCAGGCCTGGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS CCA 72 bp CTTAGAGCTGGCCTCTGGAGCCCCTTCCTCTTTGCCTaGAGGGCCGGGTTTTGGCACACCTTTGTCCTCCTT +
Preference number: 6 (lower is better)
Translates to: LRAGLWSPFLFA*RAGFWHTFVLL
Trigger: AAGGAGGACAAAGGTGTGCCAAAACCCGGCCCTCCAGGCAAAGAGGAAGGGGCTCCAGAGGCCAGCTCTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151373.4
CDS CCA 72 bp CTCCTGTCTCCTGCTGCACGTCAGAGGCTGGTGACTTaGCCTGCTGTTTTCCAGAGGGGTTCAACTTCGGGC +
Preference number: 6 (lower is better)
Translates to: LLSPAARQRLVT*PAVFQRGSTSG
Trigger: GCCCGAAGTTGAACCCCTCTGGAAAACAGCAGGCCAAGTCACCAGCCTCTGACGTGCAGCAGGAGACAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151373.4
CDS CCA 72 bp GGGTCCAGAGAAGCTGTGAAGATCCTCTCAAGTCGCTaGTGTGCCTCCTCTGCAGGACTCAACCGGACCTCG +
Preference number: 6 (lower is better)
Translates to: GSREAVKILSSR*CASSAGLNRTS
Trigger: CGAGGTCCGGTTGAGTCCTGCAGAGGAGGCACACCAGCGACTTGAGAGGATCTTCACAGCTTCTCTGGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151373.4
CDS CAA 72 bp ATGTCCGTCAGGTGCAGGTCAGAGCCACTGGCCACCTaGATAGGGATGGGGTTGGAGATTTCCAGGCGCGTC +
Preference number: 6 (lower is better)
Translates to: MSVRCRSEPLAT*IGMGLEISRRV
Trigger: GACGCGCCTGGAAATCTCCAACCCCATCCCTATCAAGGTGGCCAGTGGCTCTGACCTGCACCTGACGGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130627.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS CAA 72 bp CATTGTCTGGATGGAGGCCGAAGCCACCTGGCCAGCTaGGTCAAAGTCCAGGGAGAGGATCTGGGAGAAGCG +
Preference number: 6 (lower is better)
Translates to: HCLDGGRSHLAS*VKVQGEDLGEA
Trigger: CGCTTCTCCCAGATCCTCTCCCTGGACTTTGACCAAGCTGGCCAGGTGGCTTCGGCCTCCATCCAGACAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CAA 72 bp TCCTCCTTGGTGTCACGAAGCTGTCGCTGGAGCCTCTaGTTCTGCTCCTTCTCACGGTTCTCAGCTGCGGCG +
Preference number: 6 (lower is better)
Translates to: SSLVSRSCRWSL*FCSFSRFSAAA
Trigger: CGCCGCAGCTGAGAACCGTGAGAAGGAGCAGAACAAGAGGCTCCAGCGACAGCTTCGTGACACCAAGGAGGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CAA 72 bp GTCTTGGAGTTTGCCCCGCTTCCTCAACGTCTGTGGTaGGGCCCTTTTTCACACTGGAGCGGCTATGGCCGG +
Preference number: 6 (lower is better)
Translates to: VLEFAPLPQRLW*GPFSHWSGYGR
Trigger: CCGGCCATAGCCGCTCCAGTGTGAAAAAGGGCCCAACCACAGACGTTGAGGAAGCGGGGCAAACTCCAAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS CAA 72 bp GCTCCTGTCTCCTGCTGCACGTCAGAGGCTGGTGACTaGGCCTGCTGTTTTCCAGAGGGGTTCAACTTCGGG +
Preference number: 6 (lower is better)
Translates to: APVSCCTSEAGD*ACCFPEGFNFG
Trigger: CCCGAAGTTGAACCCCTCTGGAAAACAGCAGGCCAAGTCACCAGCCTCTGACGTGCAGCAGGAGACAGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151373.4
CDS CAA 72 bp GCGGGCAAACTGCTTTCGTCCAGCTTCAGCAGCGTCTaGCTCCTCAAGGGGCTCTTTGGTAGCTCCAGCAGC +
Preference number: 6 (lower is better)
Translates to: AGKLLSSSFSSV*LLKGLFGSSSS
Trigger: GCTGCTGGAGCTACCAAAGAGCCCCTTGAGGAGCAAGACGCTGCTGAAGCTGGACGAAAGCAGTTTGCCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172303.10
CDS CAA 90 bp AGCTTCACACGCGCCTTCCCCTCGGGTAGGCTGAGCTCCTCAGACTaGAGCTGGCTGGCTAAGGAGAATCCATCTCTATGGACCAGCCAC +
Preference number: 6 (lower is better)
Translates to: SFTRAFPSGRLSSSD*SWLAKENPSLWTSH
Trigger: GTGGCTGGTCCATAGAGATGGATTCTCCTTAGCCAGCCAGCTCAAGTCTGAGGAGCTCAGCCTACCCGAGGGGAAGGCGCGTGTGAAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CAA 90 bp CGGAAGGAGGTGGACCGTTGCAGGGTGCCTCCTTTTAGCTGGTGTTaGAAGATAGCCGAGGACAGCTCTTCCAAGCTGCAGCCCAGCAGG +
Preference number: 6 (lower is better)
Translates to: RKEVDRCRVPPFSWC*KIAEDSSSKLQPSR
Trigger: CCTGCTGGGCTGCAGCTTGGAAGAGCTGTCCTCGGCTATCTTCAAACACCAGCTAAAAGGAGGCACCCTGCAACGGTCCACCTCCTTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CAA 90 bp TTCAGCCTCCACTCTCCCCCTGCATCATCATCATCCACCTCCCCGTaGATCTCGGCTGCCCGAATGAGCCGGGCTTCCATCACTTCCATC +
Preference number: 6 (lower is better)
Translates to: FSLHSPPASSSSTSP*ISAARMSRASITSI
Trigger: GATGGAAGTGATGGAAGCCCGGCTCATTCGGGCAGCCGAGATCAACGGGGAGGTGGATGATGATGATGCAGGGGGAGAGTGGAGGCTGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CAA 90 bp TTCTCCAGCTCGTGGTTTCGGACCTGCTGGCCCTCCAGGTGCAGCTaGGTGTCCTGCAGCTCAGCTGTGAGCCTTTGGCACTTCTTCTTG +
Preference number: 6 (lower is better)
Translates to: FSSSWFRTCWPSRCS*VSCSSAVSLWHFFL
Trigger: CAAGAAGAAGTGCCAAAGGCTCACAGCTGAGCTGCAGGACACCAAGCTGCACCTGGAGGGCCAGCAGGTCCGAAACCACGAGCTGGAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CAA 90 bp TCTTTGACCGTCTTGGAGTTTGCCCCGCTTCCTCAACGTCTGTGGTaGGGCCCTTTTTCACACTGGAGCGGCTATGGCCGGAGACGGTGG +
Preference number: 6 (lower is better)
Translates to: SLTVLEFAPLPQRLW*GPFSHWSGYGRRRW
Trigger: CCACCGTCTCCGGCCATAGCCGCTCCAGTGTGAAAAAGGGCCCAACCACAGACGTTGAGGAAGCGGGGCAAACTCCAAGACGGTCAAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS CAA 90 bp ATACTCCCAGCCTGCTCATCCAGCTCCTCTTCCTGGTCCTTGACCTaGGCCTCCAAGTCCCGGAGCTGCTTCTTGACCTTGGCCAGAGAA +
Preference number: 6 (lower is better)
Translates to: ILPACSSSSSSWSLT*ASKSRSCFLTLARE
Trigger: TTCTCTGGCCAAGGTCAAGAAGCAGCTCCGGGACTTGGAGGCCAAGGTCAAGGACCAGGAAGAGGAGCTGGATGAGCAGGCTGGGAGTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS GCA 72 bp CTGTTCCCAAAGGCTTCCAGGAGGGTGGACAGAGCCTaGCACTTCTCCACTGAGAACACCTTGGTCCCACTG +
Preference number: 6 (lower is better)
Translates to: LFPKASRRVDRA*HFSTENTLVPL
Trigger: CAGTGGGACCAAGGTGTTCTCAGTGGAGAAGTGGCAGGCTCTGTCCACCCTCCTGGAAGCCTTTGGGAACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS GCA 72 bp GCCAGCACCTTCATGGCAGCCTGGAGCTTACTGAACTaGTGTGCAGCCTTCTGCTTCTCCTCAGGCTTGGAC +
Preference number: 6 (lower is better)
Translates to: ASTFMAAWSLLN*CAAFCFSSGLD
Trigger: GTCCAAGCCTGAGGAGAAGCAGAAGGCTGCACAGCAGTTCAGTAAGCTCCAGGCTGCCATGAAGGTGCTGGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS GCA 72 bp CTCTGCTGTTCCACCTCCATCTTGTCTTCCAGCTCCTaGTGGAGCCGCTTCTTGGTGAAGTCCACCTCCCGA +
Preference number: 6 (lower is better)
Translates to: LCCSTSILSSSS*WSRFLVKSTSR
Trigger: TCGGGAGGTGGACTTCACCAAGAAGCGGCTCCAGCAGGAGCTGGAAGACAAGATGGAGGTGGAACAGCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS GCA 72 bp TCTTCCGGTCATCATCCTCAGAGTCAGGCTCCAGCCTaGTCCGCTGGAACGGCACAGGCTTGTAGCTCAAGA +
Preference number: 6 (lower is better)
Translates to: SSGHHPQSQAPA*SAGTAQACSSR
Trigger: TCTTGAGCTACAAGCCTGTGCCGTTCCAGCGGAGCAGGCTGGAGCCTGACTCTGAGGATGATGACCGGAAGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS GCA 72 bp TATGCTGCCTTCTGGGCCCATTCGTGGCGGGCAAACTaGTTTCGTCCAGCTTCAGCAGCGTCTTGCTCCTCA +
Preference number: 6 (lower is better)
Translates to: YAAFWAHSWRAN*FRPASAASCSS
Trigger: TGAGGAGCAAGACGCTGCTGAAGCTGGACGAAAGCAGTTTGCCCGCCACGAATGGGCCCAGAAGGCAGCATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172303.10
CDS CCA 72 bp TGGTTGTGCGCCGCAGTGAGAAGCCAAAGTCTCCTGTaGGTCTTCGTTGTAACTCCAGCTCCCGGAGAGCAG +
Preference number: 6 (lower is better)
Translates to: WLCAAVRSQSLL*VFVVTPAPGEQ
Trigger: CTGCTCTCCGGGAGCTGGAGTTACAACGAAGACCCACAGGAGACTTTGGCTTCTCACTGCGGCGCACAACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130627.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS CCA 72 bp GAAGCCGGGGTGCATTCTGGGTGGCTGGGTTCTGCTTaGTGTAATTCAGCCAGCCAGCCACGTTGTACTCCA +
Preference number: 6 (lower is better)
Translates to: EAGVHSGWLGSA*CNSASQPRCTP
Trigger: TGGAGTACAACGTGGCTGGCTGGCTGAATTACACCAAGCAGAACCCAGCCACCCAGAATGCACCCCGGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CCA 72 bp AGCCGCTTCTCTGATTCAAAGTCCCGCTGGTTCACCTaGTCACTGAGCGTGGAGAGCTTGCTCTCCAGCTCC +
Preference number: 6 (lower is better)
Translates to: SRFSDSKSRWFT*SLSVESLLSSS
Trigger: GGAGCTGGAGAGCAAGCTCTCCACGCTCAGTGACCAGGTGAACCAGCGGGACTTTGAATCAGAGAAGCGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CCA 72 bp TTCTGCTCCTTCTCACGGTTCTCAGCTGCGGCGCGCTaGTCCCGTTCCTCAGTCAGCTTCTCCATGGTTTCT +
Preference number: 6 (lower is better)
Translates to: FCSFSRFSAAAR*SRSSVSFSMVS
Trigger: AGAAACCATGGAGAAGCTGACTGAGGAACGGGACCAGCGCGCCGCAGCTGAGAACCGTGAGAAGGAGCAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CCA 72 bp TCTTGGAGTTTGCCCCGCTTCCTCAACGTCTGTGGTTaGGCCCTTTTTCACACTGGAGCGGCTATGGCCGGA +
Preference number: 6 (lower is better)
Translates to: SWSLPRFLNVCG*ALFHTGAAMAG
Trigger: TCCGGCCATAGCCGCTCCAGTGTGAAAAAGGGCCCAACCACAGACGTTGAGGAAGCGGGGCAAACTCCAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS CAA 72 bp TTTGAGCCGACTGGCCAGGTTCTCCAGGCGCTTCACTaGGGTCTTTTCGAACTCCAGGCGTGTCTCCAGCTC +
Preference number: 6 (lower is better)
Translates to: FEPTGQVLQALH*GLFELQACLQL
Trigger: GAGCTGGAGACACGCCTGGAGTTCGAAAAGACCCAAGTGAAGCGCCTGGAGAACCTGGCCAGTCGGCTCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CAA 72 bp TCGGCTTCCTTCCTGGCAAGCTCGCTCATCTCCTCCTaGGTGTCACGAAGCTGTCGCTGGAGCCTCTTGTTC +
Preference number: 6 (lower is better)
Translates to: SASFLASSLISS*VSRSCRWSLLF
Trigger: GAACAAGAGGCTCCAGCGACAGCTTCGTGACACCAAGGAGGAGATGAGCGAGCTTGCCAGGAAGGAAGCCGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CAA 72 bp GCCTTAGAAGGTCCCTTGTTCTTTGACAACCAGGACTaGACCCCGTCGACCCGGTCCTCCAGCTCTGAGTCC +
Preference number: 6 (lower is better)
Translates to: ALEGPLFFDNQD*TPSTRSSSSES
Trigger: GGACTCAGAGCTGGAGGACCGGGTCGACGGGGTCAAGTCCTGGTTGTCAAAGAACAAGGGACCTTCTAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CAA 90 bp CTGCTGAGTCGGAGCTCGTTCCTCTCCTTCTCCACCTTCTCAAGCTaGCTGCGCAGCTGCTGGATCTCCTCGTCTTTGTTTCGGATCTGC +
Preference number: 6 (lower is better)
Translates to: LLSRSSFLSFSTFSS*LRSCWISSSLFRIC
Trigger: GCAGATCCGAAACAAAGACGAGGAGATCCAGCAGCTGCGCAGCAAGCTTGAGAAGGTGGAGAAGGAGAGGAACGAGCTCCGACTCAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CAA 90 bp AGCTGTGAGCCTTTGGCACTTCTTCTTGAGCTGCTGCAGTGCCCGTaGACTCTCATCACTATCTGCTTGCAGGTCCCCAAGCCGCCTCTC +
Preference number: 6 (lower is better)
Translates to: SCEPLALLLELLQCP*TLITICLQVPKPPL
Trigger: GAGAGGCGGCTTGGGGACCTGCAAGCAGATAGTGATGAGAGTCAACGGGCACTGCAGCAGCTCAAGAAGAAGTGCCAAAGGCTCACAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS TCA 72 bp TCCTCGTCTTTGTTTCGGATCTGCTCCTCTGACAGCTaGACTTGGATGAGGGGCCGCACGGTGGTGAAGAGC +
Preference number: 6 (lower is better)
Translates to: SSSLFRICSSDS*TWMRGRTVVKS
Trigger: GCTCTTCACCACCGTGCGGCCCCTCATCCAAGTTCAGCTGTCAGAGGAGCAGATCCGAAACAAAGACGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS TCA 72 bp CTGGATCTCCTCGTCTTTGTTTCGGATCTGCTCCTCTaGCAGCTGAACTTGGATGAGGGGCCGCACGGTGGT +
Preference number: 6 (lower is better)
Translates to: LDLLVFVSDLLL*QLNLDEGPHGG
Trigger: ACCACCGTGCGGCCCCTCATCCAAGTTCAGCTGTCAGAGGAGCAGATCCGAAACAAAGACGAGGAGATCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS GCA 72 bp CTACCCCGATTGCTGTCAGAGTCAATGTCCGTCAGGTaGAGGTCAGAGCCACTGGCCACCTTGATAGGGATG +
Preference number: 6 (lower is better)
Translates to: LPRLLSESMSVR*RSEPLATLIGM
Trigger: CATCCCTATCAAGGTGGCCAGTGGCTCTGACCTGCACCTGACGGACATTGACTCTGACAGCAATCGGGGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130627.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS GCA 72 bp TATGCTGCCTTCTGGGCCCATTCGTGGCGGGCAAACTaGTTTCGTCCAGCAGCAACTGCCAGCTCTTTGGTA +
Preference number: 6 (lower is better)
Translates to: YAAFWAHSWRAN*FRPAATASSLV
Trigger: TACCAAAGAGCTGGCAGTTGCTGCTGGACGAAAGCAGTTTGCCCGCCACGAATGGGCCCAGAAGGCAGCATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000000645.13
CDS GCA 72 bp TCCCCAGGCCAGCCCTCGGCCACAGGAAGGAAGCAGTaGACGAAATGCATCTTGGACCTCTTGATGGTATCA +
Preference number: 6 (lower is better)
Translates to: SPGQPSATGRKQ*TKCILDLLMVS
Trigger: TGATACCATCAAGAGGTCCAAGATGCATTTCGTGCACTGCTTCCTTCCTGTGGCCGAGGGCTGGCCTGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS GCA 72 bp TGCATCATCATCATCCACCTCCCCGTTGATCTCGGCTaGCCGAATGAGCCGGGCTTCCATCACTTCCATCTC +
Preference number: 6 (lower is better)
Translates to: CIIIIHLPVDLG*PNEPGFHHFHL
Trigger: GAGATGGAAGTGATGGAAGCCCGGCTCATTCGGGCAGCCGAGATCAACGGGGAGGTGGATGATGATGATGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS GCA 72 bp TCCCCAATGCGTTTGAACGCCAGCTTTAGGTCGGCTTaGAGGCTTTGGTTAGCAGCTTCCAGGCTCTCCAGG +
Preference number: 6 (lower is better)
Translates to: SPMRLNASFRSA*RLWLAASRLSR
Trigger: CCTGGAGAGCCTGGAAGCTGCTAACCAAAGCCTGCAAGCCGACCTAAAGCTGGCGTTCAAACGCATTGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CCA 72 bp ATATCATCTTCATCCACATCCAGGATGGCTCCGTCATaGTCCAGCTTCACACGCGCCTTCCCCTCGGGTAGG +
Preference number: 6 (lower is better)
Translates to: ISSSSTSRMAPS*SSFTRAFPSGR
Trigger: CCTACCCGAGGGGAAGGCGCGTGTGAAGCTGGACCATGACGGAGCCATCCTGGATGTGGATGAAGATGATAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CCA 72 bp CAAGTAGTAGAAGACATTGAAAGTAGCCTCACTGGCTaGGCGCCGGGCCACACGCAGCTTCTCCAGGAGCAT +
Preference number: 6 (lower is better)
Translates to: QVVEDIESSLTG*APGHTQLLQEH
Trigger: ATGCTCCTGGAGAAGCTGCGTGTGGCCCGGCGCCCAGCCAGTGAGGCTACTTTCAATGTCTTCTACTACTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CCA 72 bp CTCGGGGCATTGTTCTTTAAGTGGTCCAGCATGATCTaGGCATCTGCCAGCAGCGCTTTGGTGCGCTTCAGG +
Preference number: 6 (lower is better)
Translates to: LGALFFKWSSMI*ASASSALVRFR
Trigger: CCTGAAGCGCACCAAAGCGCTGCTGGCAGATGCCCAGATCATGCTGGACCACTTAAAGAACAATGCCCCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CCA 72 bp GTAGCTCAAGACCTCGTTAATGGCAGCCTCCAGGTCTaGATCAAGGTAGGAGTGGCGACTGACAGGTCGGAC +
Preference number: 6 (lower is better)
Translates to: VAQDLVNGSLQV*IKVGVATDRSD
Trigger: GTCCGACCTGTCAGTCGCCACTCCTACCTTGATCCAGACCTGGAGGCTGCCATTAACGAGGTCTTGAGCTAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS CCA 72 bp CACTGGAGCGGCTATGGCCGGAGACGGTGGAGCCACTaGATGACGAGGACTCAGATTCACTCTCTGTTTTCT +
Preference number: 6 (lower is better)
Translates to: HWSGYGRRRWSH*MTRTQIHSLFS
Trigger: AGAAAACAGAGAGTGAATCTGAGTCCTCGTCATCCAGTGGCTCCACCGTCTCCGGCCATAGCCGCTCCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS CCA 72 bp CCTTTTTCACACTGGAGCGGCTATGGCCGGAGACGGTaGAGCCACTGGATGACGAGGACTCAGATTCACTCT +
Preference number: 6 (lower is better)
Translates to: PFSHWSGYGRRR*SHWMTRTQIHS
Trigger: AGAGTGAATCTGAGTCCTCGTCATCCAGTGGCTCCACCGTCTCCGGCCATAGCCGCTCCAGTGTGAAAAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS CAA 72 bp GGGTTGGAGATTTCCAGGCGCGTCTTAGATTCCCGCTaGGAGGACCGGTTCAAGTTGAAAAAGCCACGGCGC +
Preference number: 6 (lower is better)
Translates to: GLEISRRVLDSR*EDRFKLKKPRR
Trigger: GCGCCGTGGCTTTTTCAACTTGAACCGGTCCTCCAAGCGGGAATCTAAGACGCGCCTGGAAATCTCCAACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130627.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS CAA 72 bp TGGTCCCGTTCCTCAGTCAGCTTCTCCATGGTTTCTTaGAGCCGACTGGCCAGGTTCTCCAGGCGCTTCACT +
Preference number: 6 (lower is better)
Translates to: WSRSSVSFSMVS*SRLARFSRRFT
Trigger: AGTGAAGCGCCTGGAGAACCTGGCCAGTCGGCTCAAAGAAACCATGGAGAAGCTGACTGAGGAACGGGACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CAA 90 bp ATTTCCAGGCGCGTCTTAGATTCCCGCTTGGAGGACCGGTTCAAGTaGAAAAAGCCACGGCGCATGCTCATCTCTTCCAGGCTCCGCAGT +
Preference number: 6 (lower is better)
Translates to: ISRRVLDSRLEDRFK*KKPRRMLISSRLRS
Trigger: ACTGCGGAGCCTGGAAGAGATGAGCATGCGCCGTGGCTTTTTCAACTTGAACCGGTCCTCCAAGCGGGAATCTAAGACGCGCCTGGAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130627.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS CAA 90 bp TCAGAGTCAATGTCCGTCAGGTGCAGGTCAGAGCCACTGGCCACCTaGATAGGGATGGGGTTGGAGATTTCCAGGCGCGTCTTAGATTCC +
Preference number: 6 (lower is better)
Translates to: SESMSVRCRSEPLAT*IGMGLEISRRVLDS
Trigger: GGAATCTAAGACGCGCCTGGAAATCTCCAACCCCATCCCTATCAAGGTGGCCAGTGGCTCTGACCTGCACCTGACGGACATTGACTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130627.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS CAA 90 bp CATGGTTTCTTTGAGCCGACTGGCCAGGTTCTCCAGGCGCTTCACTaGGGTCTTTTCGAACTCCAGGCGTGTCTCCAGCTCCCTGATCTT +
Preference number: 6 (lower is better)
Translates to: HGFFEPTGQVLQALH*GLFELQACLQLPDL
Trigger: AAGATCAGGGAGCTGGAGACACGCCTGGAGTTCGAAAAGACCCAAGTGAAGCGCCTGGAGAACCTGGCCAGTCGGCTCAAAGAAACCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CAA 90 bp TCAGAAGGTGCCTTAGAAGGTCCCTTGTTCTTTGACAACCAGGACTaGACCCCGTCGACCCGGTCCTCCAGCTCTGAGTCCACATCTGAG +
Preference number: 6 (lower is better)
Translates to: SEGALEGPLFFDNQD*TPSTRSSSSESTSE
Trigger: CTCAGATGTGGACTCAGAGCTGGAGGACCGGGTCGACGGGGTCAAGTCCTGGTTGTCAAAGAACAAGGGACCTTCTAAGGCACCTTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CAA 90 bp GAACTCTTCAAGCTGCCATCGTCAGAAGGTGCCTTAGAAGGTCCCTaGTTCTTTGACAACCAGGACTTGACCCCGTCGACCCGGTCCTCC +
Preference number: 6 (lower is better)
Translates to: ELFKLPSSEGALEGP*FFDNQDLTPSTRSS
Trigger: GGAGGACCGGGTCGACGGGGTCAAGTCCTGGTTGTCAAAGAACAAGGGACCTTCTAAGGCACCTTCTGACGATGGCAGCTTGAAGAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000135375.4
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS TCA 72 bp AGATGTGGGGTGCCATGTCCTCCCGCCGACACCCCTTaGACATGTGCATCACCTTCTCTGAATACACAGCAG +
Preference number: 6 (lower is better)
Translates to: RCGVPCPPADTP*TCASPSLNTQQ
Trigger: CTGCTGTGTATTCAGAGAAGGTGATGCACATGTTCAAGGGGTGTCGGCGGGAGGACATGGCACCCCACATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS TCA 72 bp GTACCCGCGATGGTAGCCAGATACTGCACCAGATGCTaGAAGCTGGTAGTCTTGCCACTGCCACTACTACCC +
Preference number: 6 (lower is better)
Translates to: VPAMVARYCTRC*KLVVLPLPLLP
Trigger: GGGTAGTAGTGGCAGTGGCAAGACTACCAGCTTTCAGCATCTGGTGCAGTATCTGGCTACCATCGCGGGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS TCA 72 bp TCTTGCTCGGGGCATTGTTCTTTAAGTGGTCCAGCATaGTCTGGGCATCTGCCAGCAGCGCTTTGGTGCGCT +
Preference number: 6 (lower is better)
Translates to: SCSGHCSLSGPA*SGHLPAALWCA
Trigger: AGCGCACCAAAGCGCTGCTGGCAGATGCCCAGATCATGCTGGACCACTTAAAGAACAATGCCCCGAGCAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS TCA 72 bp CCATCGCTTTCCGTGCCTTTACAGCTGCTGCACAGGTaGATTCCGACTCTTCCAGCTGGTTCTTCAGCTGGG +
Preference number: 6 (lower is better)
Translates to: PSLSVPLQLLHR*IPTLPAGSSAG
Trigger: CCCAGCTGAAGAACCAGCTGGAAGAGTCGGAATTCACCTGTGCAGCAGCTGTAAAGGCACGGAAAGCGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS GCA 72 bp GGACTGGTCCTGACGACTCATCAACATCGCCCTATATaGAGTCTGGGCTACAGCGTAGATGTGGGGTGCCAT +
Preference number: 6 (lower is better)
Translates to: GLVLTTHQHRPI*SLGYSVDVGCH
Trigger: ATGGCACCCCACATCTACGCTGTAGCCCAGACTGCATATAGGGCGATGTTGATGAGTCGTCAGGACCAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS GCA 72 bp GTGGGAAGCCTGGTCCACAGCAGCCACGGAGTCATCTaGAACTGGCTCCAAGTCATCAAACGCCAGTTCTAT +
Preference number: 6 (lower is better)
Translates to: VGSLVHSSHGVI*NWLQVIKRQFY
Trigger: ATAGAACTGGCGTTTGATGACTTGGAGCCAGTTGCAGATGACTCCGTGGCTGCTGTGGACCAGGCTTCCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS GCA 72 bp GTGCAGGTCTTCCATCTCCACCTCCATCGCTTTCCGTaGCTTTACAGCTGCTGCACAGGTGAATTCCGACTC +
Preference number: 6 (lower is better)
Translates to: VQVFHLHLHRFP*LYSCCTGEFRL
Trigger: GAGTCGGAATTCACCTGTGCAGCAGCTGTAAAGGCACGGAAAGCGATGGAGGTGGAGATGGAAGACCTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS GCA 72 bp TCCAGCGCTGTCTTGGCTTTGGCGATGTCATCAATCTaGAGGTGCAGGTCTTCCATCTCCACCTCCATCGCT +
Preference number: 6 (lower is better)
Translates to: SSAVLALAMSSI*RCRSSISTSIA
Trigger: AGCGATGGAGGTGGAGATGGAAGACCTGCACCTGCAGATTGATGACATCGCCAAAGCCAAGACAGCGCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS GCA 72 bp TCCACCATGGACTGCTCCAGGAACTCCACCTGGCTCTaGAGAGCTTGTAGCTTCTCCTGTAGCTCTTGCTTC +
Preference number: 6 (lower is better)
Translates to: STMDCSRNSTWL*RACSFSCSSCF
Trigger: GAAGCAAGAGCTACAGGAGAAGCTACAAGCTCTGCAGAGCCAGGTGGAGTTCCTGGAGCAGTCCATGGTGGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS GCA 72 bp TATGCTGCCTTCTGGGCCCATTCGTGGCGGGCAAACTaGTTTCGTCCAGCTTCAGCAGCTTCTTTGGTAGCT +
Preference number: 6 (lower is better)
Translates to: YAAFWAHSWRAN*FRPASAASLVA
Trigger: AGCTACCAAAGAAGCTGCTGAAGCTGGACGAAAGCAGTTTGCCCGCCACGAATGGGCCCAGAAGGCAGCATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS CCA 72 bp ATTCCAAACACATTGTTCTCTGCCAAGTGGTTCAGGTaGAGCTCTGTCCTGAGGGTGGCATCCCCACAGGCC +
Preference number: 6 (lower is better)
Translates to: IPNTLFSAKWFR*SSVLRVASPQA
Trigger: GGCCTGTGGGGATGCCACCCTCAGGACAGAGCTCCACCTGAACCACTTGGCAGAGAACAATGTGTTTGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CCA 72 bp GTCGACTCAGTTGCTCCTCCAGCGCTGTCTTGGCTTTaGCGATGTCATCAATCTGCAGGTGCAGGTCTTCCA +
Preference number: 6 (lower is better)
Translates to: VDSVAPPALSWL*RCHQSAGAGLP
Trigger: TGGAAGACCTGCACCTGCAGATTGATGACATCGCCAAAGCCAAGACAGCGCTGGAGGAGCAACTGAGTCGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CCA 72 bp TCGCTCATCTCCTCCTTGGTGTCACGAAGCTGTCGCTaGAGCCTCTTGTTCTGCTCCTTCTCACGGTTCTCA +
Preference number: 6 (lower is better)
Translates to: SLISSLVSRSCR*SLLFCSFSRFS
Trigger: TGAGAACCGTGAGAAGGAGCAGAACAAGAGGCTCCAGCGACAGCTTCGTGACACCAAGGAGGAGATGAGCGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CCA 72 bp ACATCAGACTGCGCAGGCCTACAGAGAGCTCATCCTTaGCTGCCTCCTTCTTTGTTTCCGGCTTTGGTGGAG +
Preference number: 6 (lower is better)
Translates to: TSDCAGLQRAHP*LPPSLFPALVE
Trigger: CTCCACCAAAGCCGGAAACAAAGAAGGAGGCAGCCAAGGATGAGCTCTCTGTAGGCCTGCGCAGTCTGATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151373.4
CDS CAA 72 bp CGCGTCTTAGATTCCCGCTTGGAGGACCGGTTCAAGTaGAAAAAGCCACGGCGCATGCTCATCTCTTCCAGG +
Preference number: 6 (lower is better)
Translates to: RVLDSRLEDRFK*KKPRRMLISSR
Trigger: CCTGGAAGAGATGAGCATGCGCCGTGGCTTTTTCAACTTGAACCGGTCCTCCAAGCGGGAATCTAAGACGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130627.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS CAA 72 bp GTGGACCGTTGCAGGGTGCCTCCTTTTAGCTGGTGTTaGAAGATAGCCGAGGACAGCTCTTCCAAGCTGCAG +
Preference number: 6 (lower is better)
Translates to: VDRCRVPPFSWC*KIAEDSSSKLQ
Trigger: CTGCAGCTTGGAAGAGCTGTCCTCGGCTATCTTCAAACACCAGCTAAAAGGAGGCACCCTGCAACGGTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CAA 72 bp AGTCGACTCAGTTGCTCCTCCAGCGCTGTCTTGGCTTaGGCGATGTCATCAATCTGCAGGTGCAGGTCTTCC +
Preference number: 6 (lower is better)
Translates to: SRLSCSSSAVLA*AMSSICRCRSS
Trigger: GGAAGACCTGCACCTGCAGATTGATGACATCGCCAAAGCCAAGACAGCGCTGGAGGAGCAACTGAGTCGACT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CAA 90 bp ATAGGGATGGGGTTGGAGATTTCCAGGCGCGTCTTAGATTCCCGCTaGGAGGACCGGTTCAAGTTGAAAAAGCCACGGCGCATGCTCATC +
Preference number: 6 (lower is better)
Translates to: IGMGLEISRRVLDSR*EDRFKLKKPRRMLI
Trigger: GATGAGCATGCGCCGTGGCTTTTTCAACTTGAACCGGTCCTCCAAGCGGGAATCTAAGACGCGCCTGGAAATCTCCAACCCCATCCCTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130627.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS TCA 72 bp GAAGCCTGGTGTGTCCACGATCATCATGGAACAGAGTaGGTGCTGGCTGGACTTGAGAGCCCTGTTTACCAG +
Preference number: 6 (lower is better)
Translates to: EAWCVHDHHGTE*VLAGLESPVYQ
Trigger: CTGGTAAACAGGGCTCTCAAGTCCAGCCAGCACTCACTCTGTTCCATGATGATCGTGGACACACCAGGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS TCA 72 bp CTTTGGCACTTCTTCTTGAGCTGCTGCAGTGCCCGTTaGCTCTCATCACTATCTGCTTGCAGGTCCCCAAGC +
Preference number: 6 (lower is better)
Translates to: LWHFFLSCCSAR*LSSLSACRSPS
Trigger: GCTTGGGGACCTGCAAGCAGATAGTGATGAGAGTCAACGGGCACTGCAGCAGCTCAAGAAGAAGTGCCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS TCA 72 bp CATCCTCAATGGCAGCTTGCAAGTCCCCAATGCGTTTaGACGCCAGCTTTAGGTCGGCTTGCAGGCTTTGGT +
Preference number: 6 (lower is better)
Translates to: HPQWQLASPQCV*TPALGRLAGFG
Trigger: ACCAAAGCCTGCAAGCCGACCTAAAGCTGGCGTTCAAACGCATTGGGGACTTGCAAGCTGCCATTGAGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS GCA 72 bp CAGCCCTCGGCCACAGGAAGGAAGCAGTGCACGAAATaGATCTTGGACCTCTTGATGGTATCAATGAGGGCA +
Preference number: 6 (lower is better)
Translates to: QPSATGRKQCTK*ILDLLMVSMRA
Trigger: TGCCCTCATTGATACCATCAAGAGGTCCAAGATGCATTTCGTGCACTGCTTCCTTCCTGTGGCCGAGGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS GCA 72 bp CTCCACCTCCATCGCTTTCCGTGCCTTTACAGCTGCTaGACAGGTGAATTCCGACTCTTCCAGCTGGTTCTT +
Preference number: 6 (lower is better)
Translates to: LHLHRFPCLYSC*TGEFRLFQLVL
Trigger: AAGAACCAGCTGGAAGAGTCGGAATTCACCTGTGCAGCAGCTGTAAAGGCACGGAAAGCGATGGAGGTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS GCA 72 bp CATCTCCACCTCCATCGCTTTCCGTGCCTTTACAGCTaGTGCACAGGTGAATTCCGACTCTTCCAGCTGGTT +
Preference number: 6 (lower is better)
Translates to: HLHLHRFPCLYS*CTGEFRLFQLV
Trigger: AACCAGCTGGAAGAGTCGGAATTCACCTGTGCAGCAGCTGTAAAGGCACGGAAAGCGATGGAGGTGGAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS GCA 72 bp GCTGTCTTGGCTTTGGCGATGTCATCAATCTGCAGGTaGAGGTCTTCCATCTCCACCTCCATCGCTTTCCGT +
Preference number: 6 (lower is better)
Translates to: AVLALAMSSICR*RSSISTSIAFR
Trigger: ACGGAAAGCGATGGAGGTGGAGATGGAAGACCTGCACCTGCAGATTGATGACATCGCCAAAGCCAAGACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CCA 72 bp AAGGAGGTGGACCGTTGCAGGGTGCCTCCTTTTAGCTaGTGTTTGAAGATAGCCGAGGACAGCTCTTCCAAG +
Preference number: 6 (lower is better)
Translates to: KEVDRCRVPPFS*CLKIAEDSSSK
Trigger: CTTGGAAGAGCTGTCCTCGGCTATCTTCAAACACCAGCTAAAAGGAGGCACCCTGCAACGGTCCACCTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CCA 72 bp GGTGTGTCCACGATCATCATGGAACAGAGTGAGTGCTaGCTGGACTTGAGAGCCCTGTTTACCAGGGAGATG +
Preference number: 6 (lower is better)
Translates to: GVSTIIMEQSEC*LDLRALFTREM
Trigger: CATCTCCCTGGTAAACAGGGCTCTCAAGTCCAGCCAGCACTCACTCTGTTCCATGATGATCGTGGACACACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CCA 72 bp CACGATGTAGTTACGACCATGTTTCTTGGTCAGGTGTaGAGCCAGGACATCAAAGCGCCGGCGGAACTCAGA +
Preference number: 6 (lower is better)
Translates to: HDVVTTMFLGQV*SQDIKAPAELR
Trigger: TCTGAGTTCCGCCGGCGCTTTGATGTCCTGGCTCCACACCTGACCAAGAAACATGGTCGTAACTACATCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CCA 72 bp TCTCATCCACCACGATGTAGTTACGACCATGTTTCTTaGTCAGGTGTGGAGCCAGGACATCAAAGCGCCGGC +
Preference number: 6 (lower is better)
Translates to: SHPPRCSYDHVS*SGVEPGHQSAG
Trigger: GCCGGCGCTTTGATGTCCTGGCTCCACACCTGACCAAGAAACATGGTCGTAACTACATCGTGGTGGATGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CCA 72 bp TCCTTCTCCACCTTCTCAAGCTTGCTGCGCAGCTGCTaGATCTCCTCGTCTTTGTTTCGGATCTGCTCCTCT +
Preference number: 6 (lower is better)
Translates to: SFSTFSSLLRSC*ISSSLFRICSS
Trigger: AGAGGAGCAGATCCGAAACAAAGACGAGGAGATCCAGCAGCTGCGCAGCAAGCTTGAGAAGGTGGAGAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CAA 72 bp CTTAGGTGTCCTGAGTCCAGGATGATGCTACCCCGATaGCTGTCAGAGTCAATGTCCGTCAGGTGCAGGTCA +
Preference number: 6 (lower is better)
Translates to: LRCPESRMMLPR*LSESMSVRCRS
Trigger: TGACCTGCACCTGACGGACATTGACTCTGACAGCAATCGGGGTAGCATCATCCTGGACTCAGGACACCTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130627.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS CAA 72 bp CCTTTGGCACTTCTTCTTGAGCTGCTGCAGTGCCCGTaGACTCTCATCACTATCTGCTTGCAGGTCCCCAAG +
Preference number: 6 (lower is better)
Translates to: PLALLLELLQCP*TLITICLQVPK
Trigger: CTTGGGGACCTGCAAGCAGATAGTGATGAGAGTCAACGGGCACTGCAGCAGCTCAAGAAGAAGTGCCAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CAA 72 bp TCATCCTCAATGGCAGCTTGCAAGTCCCCAATGCGTTaGAACGCCAGCTTTAGGTCGGCTTGCAGGCTTTGG +
Preference number: 6 (lower is better)
Translates to: SSSMAACKSPMR*NASFRSACRLW
Trigger: CCAAAGCCTGCAAGCCGACCTAAAGCTGGCGTTCAAACGCATTGGGGACTTGCAAGCTGCCATTGAGGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CAA 90 bp GGCCAGCCCTCGGCCACAGGAAGGAAGCAGTGCACGAAATGCATCTaGGACCTCTTGATGGTATCAATGAGGGCATCTACTTGCAGCTTA +
Preference number: 6 (lower is better)
Translates to: GQPSATGRKQCTKCI*DLLMVSMRASTCSL
Trigger: TAAGCTGCAAGTAGATGCCCTCATTGATACCATCAAGAGGTCCAAGATGCATTTCGTGCACTGCTTCCTTCCTGTGGCCGAGGGCTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS TCA 72 bp CTGCCACTACTACCCAGAAGGACAATGGACTGGTCCTaGCGACTCATCAACATCGCCCTATATGCAGTCTGG +
Preference number: 6 (lower is better)
Translates to: LPLLPRRTMDWS*RLINIALYAVW
Trigger: CCAGACTGCATATAGGGCGATGTTGATGAGTCGTCAGGACCAGTCCATTGTCCTTCTGGGTAGTAGTGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS GCA 72 bp TGTGAGCCTTTGGCACTTCTTCTTGAGCTGCTGCAGTaGCCGTTGACTCTCATCACTATCTGCTTGCAGGTC +
Preference number: 6 (lower is better)
Translates to: CEPLALLLELLQ*PLTLITICLQV
Trigger: GACCTGCAAGCAGATAGTGATGAGAGTCAACGGGCACTGCAGCAGCTCAAGAAGAAGTGCCAAAGGCTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CCA 72 bp AGCCTGGTCCACAGCAGCCACGGAGTCATCTGCAACTaGCTCCAAGTCATCAAACGCCAGTTCTATGTTATC +
Preference number: 6 (lower is better)
Translates to: SLVHSSHGVICN*LQVIKRQFYVI
Trigger: GATAACATAGAACTGGCGTTTGATGACTTGGAGCCAGTTGCAGATGACTCCGTGGCTGCTGTGGACCAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CCA 72 bp CAGGTGAATTCCGACTCTTCCAGCTGGTTCTTCAGCTaGGCAATCTCCCTCTTGCTCGGGGCATTGTTCTTT +
Preference number: 6 (lower is better)
Translates to: QVNSDSSSWFFS*AISLLLGALFF
Trigger: AAAGAACAATGCCCCGAGCAAGAGGGAGATTGCCCAGCTGAAGAACCAGCTGGAAGAGTCGGAATTCACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CAA 90 bp AATTCCGACTCTTCCAGCTGGTTCTTCAGCTGGGCAATCTCCCTCTaGCTCGGGGCATTGTTCTTTAAGTGGTCCAGCATGATCTGGGCA +
Preference number: 6 (lower is better)
Translates to: NSDSSSWFFSWAISL*LGALFFKWSSMIWA
Trigger: TGCCCAGATCATGCTGGACCACTTAAAGAACAATGCCCCGAGCAAGAGGGAGATTGCCCAGCTGAAGAACCAGCTGGAAGAGTCGGAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CAA 90 bp CTTTCCATCTCATCCTCAATGGCAGCTTGCAAGTCCCCAATGCGTTaGAACGCCAGCTTTAGGTCGGCTTGCAGGCTTTGGTTAGCAGCT +
Preference number: 6 (lower is better)
Translates to: LSISSSMAACKSPMR*NASFRSACRLWLAA
Trigger: AGCTGCTAACCAAAGCCTGCAAGCCGACCTAAAGCTGGCGTTCAAACGCATTGGGGACTTGCAAGCTGCCATTGAGGATGAGATGGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CAA 90 bp TGTCGACCTCTTTCTTTCGCTGCTTCTCTTCCTTCTTTGACCGTCTaGGAGTTTGCCCCGCTTCCTCAACGTCTGTGGTTGGGCCCTTTT +
Preference number: 6 (lower is better)
Translates to: CRPLSFAASLPSLTV*EFAPLPQRLWLGPF
Trigger: AAAAGGGCCCAACCACAGACGTTGAGGAAGCGGGGCAAACTCCAAGACGGTCAAAGAAGGAAGAGAAGCAGCGAAAGAAAGAGGTCGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135375.4
CDS GCA 72 bp CAGTCCTTCACCCCCTTGTTCTTCTTGATGTTCTTCTaGACACAGCGAATGGCCAGGTCCTGGATCTTTCTC +
Preference number: 6 (lower is better)
Translates to: QSFTPLFFLMFF*TQRMARSWIFL
Trigger: GAGAAAGATCCAGGACCTGGCCATTCGCTGTGTGCAGAAGAACATCAAGAAGAACAAGGGGGTGAAGGACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CAA 72 bp TCCTCAGGCTTGGACAGTGGCACAATTCCAAACACATaGTTCTCTGCCAAGTGGTTCAGGTGGAGCTCTGTC +
Preference number: 6 (lower is better)
Translates to: SSGLDSGTIPNT*FSAKWFRWSSV
Trigger: GACAGAGCTCCACCTGAACCACTTGGCAGAGAACAATGTGTTTGGAATTGTGCCACTGTCCAAGCCTGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CAA 72 bp TTCTTCAGCTGGGCAATCTCCCTCTTGCTCGGGGCATaGTTCTTTAAGTGGTCCAGCATGATCTGGGCATCT +
Preference number: 6 (lower is better)
Translates to: FFSWAISLLLGA*FFKWSSMIWAS
Trigger: AGATGCCCAGATCATGCTGGACCACTTAAAGAACAATGCCCCGAGCAAGAGGGAGATTGCCCAGCTGAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CAA 90 bp GAGCTGCTTCTTGACCTTGGCCAGAGAAGCCTCATCCTTAGACTCTaGAGAAGAAATGTCCTGAAGCTCAGCCTCCAAGGAAACCACCTT +
Preference number: 6 (lower is better)
Translates to: ELLLDLGQRSLILRL*RRNVLKLSLQGNHL
Trigger: AAGGTGGTTTCCTTGGAGGCTGAGCTTCAGGACATTTCTTCTCAAGAGTCTAAGGATGAGGCTTCTCTGGCCAAGGTCAAGAAGCAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS GCA 72 bp TTCTCGTCACTTTCCATCTCATCCTCAATGGCAGCTTaGAAGTCCCCAATGCGTTTGAACGCCAGCTTTAGG +
Preference number: 6 (lower is better)
Translates to: FSSLSISSSMAA*KSPMRLNASFR
Trigger: CCTAAAGCTGGCGTTCAAACGCATTGGGGACTTGCAAGCTGCCATTGAGGATGAGATGGAAAGTGACGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CAA 72 bp TCGGCCACAGGAAGGAAGCAGTGCACGAAATGCATCTaGGACCTCTTGATGGTATCAATGAGGGCATCTACT +
Preference number: 6 (lower is better)
Translates to: SATGRKQCTKCI*DLLMVSMRAST
Trigger: AGTAGATGCCCTCATTGATACCATCAAGAGGTCCAAGATGCATTTCGTGCACTGCTTCCTTCCTGTGGCCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CAA 72 bp CTTGACCTTGGCCAGAGAAGCCTCATCCTTAGACTCTaGAGAAGAAATGTCCTGAAGCTCAGCCTCCAAGGA +
Preference number: 6 (lower is better)
Translates to: LDLGQRSLILRL*RRNVLKLSLQG
Trigger: TCCTTGGAGGCTGAGCTTCAGGACATTTCTTCTCAAGAGTCTAAGGATGAGGCTTCTCTGGCCAAGGTCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS TCA 72 bp TCTCATCCCGGCTCCGTTGAGAGAAGGAAAAACGTTTaGCAATCATCTGAGAGTTCTGCTTGGCCAGTGAAC +
Preference number: 6 (lower is better)
Translates to: SHPGSVERRKNV*QSSESSAWPVN
Trigger: GTTCACTGGCCAAGCAGAACTCTCAGATGATTGTCAAACGTTTTTCCTTCTCTCAACGGAGCCGGGATGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000000645.13
ENSMUST00000092887.11
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130627.9
ENSMUST00000168348.8
ENSMUST00000169105.8
CDS CAA 72 bp CTCATTCATGTCCTCCTGATCCTCTTCCAGCCGGTTTaGAATCTCGTTTTTCTCACGCTGAAGTCGACTCAG +
Preference number: 6 (lower is better)
Translates to: LIHVLLILFQPV*NLVFLTLKSTQ
Trigger: CTGAGTCGACTTCAGCGTGAGAAAAACGAGATTCAAAACCGGCTGGAAGAGGATCAGGAGGACATGAATGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CAA 90 bp TCGGCCACAGGAAGGAAGCAGTGCACGAAATGCATCTTGGACCTCTaGATGGTATCAATGAGGGCATCTACTTGCAGCTTAATCTGTATG +
Preference number: 6 (lower is better)
Translates to: SATGRKQCTKCILDL*MVSMRASTCSLICM
Trigger: CATACAGATTAAGCTGCAAGTAGATGCCCTCATTGATACCATCAAGAGGTCCAAGATGCATTTCGTGCACTGCTTCCTTCCTGTGGCCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CCA 72 bp CTTGTAGCTTCTCCTGTAGCTCTTGCTTCTCCTTGTTaGACTCTTCAATCTGAGCCTGGAGATCGTTCATCT +
Preference number: 6 (lower is better)
Translates to: LVASPVALASPC*TLQSEPGDRSS
Trigger: AGATGAACGATCTCCAGGCTCAGATTGAAGAGTCCAACAAGGAGAAGCAAGAGCTACAGGAGAAGCTACAAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10
CDS CAA 72 bp GGAAGGAAGCAGTGCACGAAATGCATCTTGGACCTCTaGATGGTATCAATGAGGGCATCTACTTGCAGCTTA +
Preference number: 6 (lower is better)
Translates to: GRKQCTKCILDL*MVSMRASTCSL
Trigger: TAAGCTGCAAGTAGATGCCCTCATTGATACCATCAAGAGGTCCAAGATGCATTTCGTGCACTGCTTCCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000000645.13
ENSMUST00000092884.11
ENSMUST00000092887.11
ENSMUST00000100794.10
ENSMUST00000102488.8
ENSMUST00000108375.9
ENSMUST00000108376.9
ENSMUST00000130305.9
ENSMUST00000130627.9
ENSMUST00000164334.8
ENSMUST00000167856.8
ENSMUST00000168348.8
ENSMUST00000169105.8
ENSMUST00000172303.10