RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MYO10 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000022272

Ensembl transcript IDs: ENSMUST00000022882.12, ENSMUST00000110457.8, ENSMUST00000124966.8, ENSMUST00000125667.3, ENSMUST00000135173.8, ENSMUST00000135981.8, ENSMUST00000137601.8, ENSMUST00000151360.7

Found 610 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGAGCCCCCGGGACTCCTCCCTCTGACGACCGGTTATCAGAAGCCTaGACAGCTGAGTTTCCAAAGCTGGGTCAGGACCAGGCGCTGGCC +
Preference number: 1 (lower is better)
Translates to: GAPGTPPSDDRLSEA*TAEFPKLGQDQALA
Trigger: GGCCAGCGCCTGGTCCTGACCCAGCTTTGGAAACTCAGCTGTCCAGGCTTCTGATAACCGGTCGTCAGAGGGAGGAGTCCCGGGGGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
3UTR CCA 90 bp AAGCCTGGACAGCTGAGTTTCCAAAGCTGGGTCAGGACCAGGCGCTaGCCCAGGCAAAGAGTGGCACGTTCACATCGGCAAGACACGTGG +
Preference number: 1 (lower is better)
Translates to: KPGQLSFQSWVRTRR*PRQRVARSHRQDTW
Trigger: CCACGTGTCTTGCCGATGTGAACGTGCCACTCTTTGCCTGGGCCAGCGCCTGGTCCTGACCCAGCTTTGGAAACTCAGCTGTCCAGGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
3UTR TCA 90 bp CCAGGATCCGGGTCTGTTAATAAAGCCACCTCGAGACTAGAACTCTaGACTAGGAAAATATACAGACTGTTTACAACATTGCACATCCTC +
Preference number: 1 (lower is better)
Translates to: PGSGSVNKATSRLEL*TRKIYRLFTTLHIL
Trigger: GAGGATGTGCAATGTTGTAAACAGTCTGTATATTTTCCTAGTTCAGAGTTCTAGTCTCGAGGTGGCTTTATTAACAGACCCGGATCCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
3UTR-3UTR TCA 90 bp CCCTCATTTGCAGGAAATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCACTGAGGCTGATCGGGTaGAGGGAGCCCCCGGGACTC +
Preference number: 2 (lower is better)
Translates to: PSFAGNQAGEVSAQSVDPLRLIG*REPPGL
Trigger: GAGTCCCGGGGGCTCCCTTCACCCGATCAGCCTCAG...TGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGATTTCCTGCAAATGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
3UTR-3UTR CCA 90 bp GAGTGTGTGAACACATGCATGCGCGGGCAAGCACAGACAGTTGAAACAAAGCAAGGCCCAGGCAAAGAGTaGCACGTTCACATCGGCAAG +
Preference number: 2 (lower is better)
Translates to: ECVNTCMRGQAQTVETKQGPGKE*HVHIGK
Trigger: CTTGCCGATGTGAACGTGCCACTCTTTGCCTGGGCC...TTGCTTTGTTTCAACTGTCTGTGCTTGCCCGCGCATGCATGTGTTCACACACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
3UTR-3UTR TCA 90 bp CCCTCATTTGCAGGAAATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCAAGAAGCCTGGACAGCTaGGTTTCCAAAGCTGGGTCA +
Preference number: 2 (lower is better)
Translates to: PSFAGNQAGEVSAQSVDPRSLDS*VSKAGS
Trigger: TGACCCAGCTTTGGAAACTCAGCTGTCCAGGCTTCT...TGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGATTTCCTGCAAATGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
3UTR-3UTR TCA 90 bp GAGTGTGTGAACACATGCATGCGCGGGCAAGCACAGACAGTTGAAACAAAGCAAAGAAGCCTGGACAGCTaGGTTTCCAAAGCTGGGTCA +
Preference number: 2 (lower is better)
Translates to: ECVNTCMRGQAQTVETKQRSLDS*VSKAGS
Trigger: TGACCCAGCTTTGGAAACTCAGCTGTCCAGGCTTCT...TTGCTTTGTTTCAACTGTCTGTGCTTGCCCGCGCATGCATGTGTTCACACACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
3UTR-3UTR CCA 90 bp CGACATGGTTATATCTGCAATCTAGCCAGAGTGATAACACAAGTTACCCTTCAAGGCCCAGGCAAAGAGTaGCACGTTCACATCGGCAAG +
Preference number: 2 (lower is better)
Translates to: RHGYICNLARVITQVTLQGPGKE*HVHIGK
Trigger: CTTGCCGATGTGAACGTGCCACTCTTTGCCTGGGCC...TTGAAGGGTAACTTGTGTTATCACTCTGGCTAGATTGCAGATATAACCATGTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
3UTR-3UTR CCA 90 bp TCAGTAGCACAGTTAAGGTCGATTAGGGTCCACTCTGCAAGTTTAAGGCACTTCGCTTTGGTGGCCGTGTaGTTTTCTCCCCTTTCTTTT +
Preference number: 2 (lower is better)
Translates to: SVAQLRSIRVHSASLRHFALVAV*FSPLSF
Trigger: AAAAGAAAGGGGAGAAAACCACACGGCCACCAAAGC...GAAGTGCCTTAAACTTGCAGAGTGGACCCTAATCGACCTTAACTGTGCTACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
3UTR-3UTR CCA 90 bp CGACATGGTTATATCTGCAATCTAGCCAGAGTGATAACACAAGTTACCCTTCAATTCTGGCTGCTTTGGTaGCCGTGTGGTTTTCTCCCC +
Preference number: 2 (lower is better)
Translates to: RHGYICNLARVITQVTLQFWLLW*PCGFLP
Trigger: GGGGAGAAAACCACACGGCCACCAAAGCAGCCAGAA...TTGAAGGGTAACTTGTGTTATCACTCTGGCTAGATTGCAGATATAACCATGTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
3UTR-3UTR TCA 90 bp CGACATGGTTATATCTGCAATCTAGCCAGAGTGATAACACAAGTTACCCTTCAAAAAGTGTTGAGTGTGTaGACACATGCATGCGCGGGC +
Preference number: 2 (lower is better)
Translates to: RHGYICNLARVITQVTLQKVLSV*THACAG
Trigger: GCCCGCGCATGCATGTGTTCACACACTCAACACTTT...TTGAAGGGTAACTTGTGTTATCACTCTGGCTAGATTGCAGATATAACCATGTCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
3UTR-3UTR CCA 90 bp TGGTTTATAAATACAGTTATCTCTCTGGGCTGTAGACCTGTTAGTAATACAGCAGCTTTGGTGGCCGTGTaGTTTTCTCCCCTTTCTTTT +
Preference number: 2 (lower is better)
Translates to: WFINTVISLGCRPVSNTAALVAV*FSPLSF
Trigger: AAAAGAAAGGGGAGAAAACCACACGGCCACCAAAGC...TGCTGTATTACTAACAGGTCTACAGCCCAGAGAGATAACTGTATTTATAAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
3UTR-3UTR GCA 90 bp CGACATGGTTATATCTGCAATCTAGCCAGAGTGATAACACAAGTTACCCTTCAAGACTGTTTACAACATTaGACATCCTCTTTCCCTTTG +
Preference number: 2 (lower is better)
Translates to: RHGYICNLARVITQVTLQDCLQH*TSSFPL
Trigger: CAAAGGGAAAGAGGATGTGCAATGTTGTAAACAGTC...TTGAAGGGTAACTTGTGTTATCACTCTGGCTAGATTGCAGATATAACCATGTCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
3UTR CCA 72 bp GCTGGGTCAGGACCAGGCGCTGGCCCAGGCAAAGAGTaGCACGTTCACATCGGCAAGACACGTGGGCTTGGC +
Preference number: 3 (lower is better)
Translates to: AGSGPGAGPGKE*HVHIGKTRGLG
Trigger: GCCAAGCCCACGTGTCTTGCCGATGTGAACGTGCCACTCTTTGCCTGGGCCAGCGCCTGGTCCTGACCCAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
3UTR CCA 72 bp CAGCTGAGTTTCCAAAGCTGGGTCAGGACCAGGCGCTaGCCCAGGCAAAGAGTGGCACGTTCACATCGGCAA +
Preference number: 3 (lower is better)
Translates to: QLSFQSWVRTRR*PRQRVARSHRQ
Trigger: TTGCCGATGTGAACGTGCCACTCTTTGCCTGGGCCAGCGCCTGGTCCTGACCCAGCTTTGGAAACTCAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
3UTR CCA 72 bp GGTTATCAGAAGCCTGGACAGCTGAGTTTCCAAAGCTaGGTCAGGACCAGGCGCTGGCCCAGGCAAAGAGTG +
Preference number: 3 (lower is better)
Translates to: GYQKPGQLSFQS*VRTRRWPRQRV
Trigger: CACTCTTTGCCTGGGCCAGCGCCTGGTCCTGACCCAGCTTTGGAAACTCAGCTGTCCAGGCTTCTGATAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
3UTR CCA 72 bp GGGACTCCTCCCTCTGACGACCGGTTATCAGAAGCCTaGACAGCTGAGTTTCCAAAGCTGGGTCAGGACCAG +
Preference number: 3 (lower is better)
Translates to: GTPPSDDRLSEA*TAEFPKLGQDQ
Trigger: CTGGTCCTGACCCAGCTTTGGAAACTCAGCTGTCCAGGCTTCTGATAACCGGTCGTCAGAGGGAGGAGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
3UTR CCA 72 bp CAGGAAATCAGGCTGGGGAGGTTAGTGCACAATCAGTaGATCCATGCCCCGCCTCCAAGCTCTGCAAACCCC +
Preference number: 3 (lower is better)
Translates to: QEIRLGRLVHNQ*IHAPPPSSANP
Trigger: GGGGTTTGCAGAGCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGATTTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
3UTR GCA 72 bp AGCCTCAGCGTTTGTGTTGGAGGTCCCTTAGAGGTTTaGTTGAGGGGTACAGAGTTTGGGAATGCAGCAGCT +
Preference number: 3 (lower is better)
Translates to: SLSVCVGGPLEV*LRGTEFGNAAA
Trigger: AGCTGCTGCATTCCCAAACTCTGTACCCCTCAAGCAAACCTCTAAGGGACCTCCAACACAAACGCTGAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
3UTR-3UTR CAA 90 bp TGGTTTATAAATACAGTTATCTCTCTGGGCTGTAGACCTGTTAGTAATACAGCAACATCCTCTTTCCCTTaGTGTTTAATGCTCACAGGA +
Preference number: 3 (lower is better)
Translates to: WFINTVISLGCRPVSNTATSSFP*CLMLTG
Trigger: TCCTGTGAGCATTAAACACAAAGGGAAAGAGGATGT...TGCTGTATTACTAACAGGTCTACAGCCCAGAGAGATAACTGTATTTATAAACCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
3UTR TCA 72 bp GGGTCTGTTAATAAAGCCACCTCGAGACTAGAACTCTaGACTAGGAAAATATACAGACTGTTTACAACATTG +
Preference number: 3 (lower is better)
Translates to: GSVNKATSRLEL*TRKIYRLFTTL
Trigger: CAATGTTGTAAACAGTCTGTATATTTTCCTAGTTCAGAGTTCTAGTCTCGAGGTGGCTTTATTAACAGACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR TCA 90 bp GGGTCAGGACCAGGCGCTGGCCCAGGCAAAGAGTGGCACGTTCACATCGGCAAGAGTCACGCTGCTGCCTaGCGTGATGGCGCCATCCTC +
Preference number: 4 (lower is better)
Translates to: GSGPGAGPGKEWHVHIGKSHAAA*RDGAIL
Trigger: GAGGATGGCGCCATCACGTCAGGCAGCAGCGTGACT...CTTGCCGATGTGAACGTGCCACTCTTTGCCTGGGCCAGCGCCTGGTCCTGACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp GGGTCAGGACCAGGCGCTGGCCCAGGCAAAGAGTGGCACGTTCACATCGGCAAGTCCACGCCCTCCTCGTaGAGGGGGTGCATAGCTGTC +
Preference number: 4 (lower is better)
Translates to: GSGPGAGPGKEWHVHIGKSTPSS*RGCIAV
Trigger: GACAGCTATGCACCCCCTGCACGAGGAGGGCGTGGA...CTTGCCGATGTGAACGTGCCACTCTTTGCCTGGGCCAGCGCCTGGTCCTGACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp GGGTCAGGACCAGGCGCTGGCCCAGGCAAAGAGTGGCACGTTCACATCGGCAAGCCTGGCCCTCCACCCTaGTGTCCCCCTTGGATCTCT +
Preference number: 4 (lower is better)
Translates to: GSGPGAGPGKEWHVHIGKPGPPP*CPPWIS
Trigger: AGAGATCCAAGGGGGACACCAGGGTGGAGGGCCAGG...CTTGCCGATGTGAACGTGCCACTCTTTGCCTGGGCCAGCGCCTGGTCCTGACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp GGGTCAGGACCAGGCGCTGGCCCAGGCAAAGAGTGGCACGTTCACATCGGCAAGCACCTGGAGCTGCCCTaGCTGCTCACAGAGCGTGTG +
Preference number: 4 (lower is better)
Translates to: GSGPGAGPGKEWHVHIGKHLELP*LLTERV
Trigger: CACACGCTCTGTGAGCAGCCAGGGCAGCTCCAGGTG...CTTGCCGATGTGAACGTGCCACTCTTTGCCTGGGCCAGCGCCTGGTCCTGACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp GGGTCAGGACCAGGCGCTGGCCCAGGCAAAGAGTGGCACGTTCACATCGGCAAGGGAAGCTCGCCCAGGTaGCACCTGCTGTACTCCTCC +
Preference number: 4 (lower is better)
Translates to: GSGPGAGPGKEWHVHIGKGSSPR*HLLYSS
Trigger: GGAGGAGTACAGCAGGTGCCACCTGGGCGAGCTTCC...CTTGCCGATGTGAACGTGCCACTCTTTGCCTGGGCCAGCGCCTGGTCCTGACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR TCA 90 bp GGGTCAGGACCAGGCGCTGGCCCAGGCAAAGAGTGGCACGTTCACATCGGCAAGCGGCCTGCTGGACACTaGGAGGCGTCAGGATCTCTT +
Preference number: 4 (lower is better)
Translates to: GSGPGAGPGKEWHVHIGKRPAGH*EASGSL
Trigger: AAGAGATCCTGACGCCTCTCAGTGTCCAGCAGGCCG...CTTGCCGATGTGAACGTGCCACTCTTTGCCTGGGCCAGCGCCTGGTCCTGACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp GGGTCAGGACCAGGCGCTGGCCCAGGCAAAGAGTGGCACGTTCACATCGGCAAGGTCAACGACAGCTCCTaGCGCTCCTTCATGCGCTGC +
Preference number: 4 (lower is better)
Translates to: GSGPGAGPGKEWHVHIGKVNDSS*RSFMRC
Trigger: GCAGCGCATGAAGGAGCGGCAGGAGCTGTCGTTGAC...CTTGCCGATGTGAACGTGCCACTCTTTGCCTGGGCCAGCGCCTGGTCCTGACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp GGGTCAGGACCAGGCGCTGGCCCAGGCAAAGAGTGGCACGTTCACATCGGCAAGCCCCCGCCTTTCTTGTaGAGCCAGCCTTGCTTGAGG +
Preference number: 4 (lower is better)
Translates to: GSGPGAGPGKEWHVHIGKPPPFL*SQPCLR
Trigger: CCTCAAGCAAGGCTGGCTGCACAAGAAAGGCGGGGG...CTTGCCGATGTGAACGTGCCACTCTTTGCCTGGGCCAGCGCCTGGTCCTGACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp GGGTCAGGACCAGGCGCTGGCCCAGGCAAAGAGTGGCACGTTCACATCGGCAAGGCCCGACATCCAGTGTaGCCACAGCATTCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: GSGPGAGPGKEWHVHIGKARHPV*PQHSGG
Trigger: ACCCCCAGAATGCTGTGGGCACACTGGATGTCGGGC...CTTGCCGATGTGAACGTGCCACTCTTTGCCTGGGCCAGCGCCTGGTCCTGACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp GGGTCAGGACCAGGCGCTGGCCCAGGCAAAGAGTGGCACGTTCACATCGGCAAGGTGTCCGCGTTACAGTaGAGCACCCGGTTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: GSGPGAGPGKEWHVHIGKVSALQ*STRLAV
Trigger: CACAGCCAACCGGGTGCTGCACTGTAACGCGGACAC...CTTGCCGATGTGAACGTGCCACTCTTTGCCTGGGCCAGCGCCTGGTCCTGACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp CTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCTCTGCACCGTACTGTCGGCACTaGGGCTGGTGGGCACCACCG +
Preference number: 4 (lower is better)
Translates to: LGRLVHNQWIHAPPPSSAPYCRH*GWWAPP
Trigger: CGGTGGTGCCCACCAGCCCCAGTGCCGACAGTACGG...TGCAGAGCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR TCA 90 bp CTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCTCTGCAGGACTGCGCCCCTTCTaGGCTGAACCGGTACGCTCC +
Preference number: 4 (lower is better)
Translates to: LGRLVHNQWIHAPPPSSAGLRPF*AEPVRS
Trigger: GGAGCGTACCGGTTCAGCTCAGAAGGGGCGCAGTCC...TGCAGAGCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR TCA 90 bp GGGTCAGGACCAGGCGCTGGCCCAGGCAAAGAGTGGCACGTTCACATCGGCAAGCTTCCACGGTGCCCTTaGGCTTCTCCTCGCTATCGT +
Preference number: 4 (lower is better)
Translates to: GSGPGAGPGKEWHVHIGKLPRCP*ASPRYR
Trigger: ACGATAGCGAGGAGAAGCTCAAGGGCACCGTGGAAG...CTTGCCGATGTGAACGTGCCACTCTTTGCCTGGGCCAGCGCCTGGTCCTGACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR TCA 90 bp GGGTCAGGACCAGGCGCTGGCCCAGGCAAAGAGTGGCACGTTCACATCGGCAAGCTGGTAGGGGTTCACTaGCGCGATGATGGAGCCGAT +
Preference number: 4 (lower is better)
Translates to: GSGPGAGPGKEWHVHIGKLVGVH*RDDGAD
Trigger: ATCGGCTCCATCATCGCGTCAGTGAACCCCTACCAG...CTTGCCGATGTGAACGTGCCACTCTTTGCCTGGGCCAGCGCCTGGTCCTGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp ATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCCGTCGCTCGTCCGGATaGCACTCGTTCGCTGGTCGG +
Preference number: 4 (lower is better)
Translates to: IRLGRLVHNQWIHAPPPSRRSSG*HSFAGR
Trigger: CCGACCAGCGAACGAGTGGCATCCGGACGAGCGACG...GCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp GGGTCAGGACCAGGCGCTGGCCCAGGCAAAGAGTGGCACGTTCACATCGGCAAGCGTTGTTCTGCGGCATaGAGTAGGTGGACTCCCCAC +
Preference number: 4 (lower is better)
Translates to: GSGPGAGPGKEWHVHIGKRCSAA*SRWTPH
Trigger: GTGGGGAGTCCACCTACTGCATGCCGCAGAACAACG...CTTGCCGATGTGAACGTGCCACTCTTTGCCTGGGCCAGCGCCTGGTCCTGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR TCA 90 bp CTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCTCTGCAAGGGTCCTCCTCGGATaGGTCGTCGCTCGTCCGGAT +
Preference number: 4 (lower is better)
Translates to: LGRLVHNQWIHAPPPSSARVLLG*VVARPD
Trigger: ATCCGGACGAGCGACGACTCATCCGAGGAGGACCCT...TGCAGAGCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR TCA 90 bp GGGTCAGGACCAGGCGCTGGCCCAGGCAAAGAGTGGCACGTTCACATCGGCAAGCCTGACTCAGCACGCTaGACCATTGGCTGGCATCTT +
Preference number: 4 (lower is better)
Translates to: GSGPGAGPGKEWHVHIGKPDSAR*TIGWHL
Trigger: AAGATGCCAGCCAATGGTTCAGCGTGCTGAGTCAGG...CTTGCCGATGTGAACGTGCCACTCTTTGCCTGGGCCAGCGCCTGGTCCTGACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR TCA 90 bp CTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCTCTGCAGCAGGAAGGTGCAGCTaGGGCAGGTCAGGATCTGCC +
Preference number: 4 (lower is better)
Translates to: LGRLVHNQWIHAPPPSSAAGRCS*GRSGSA
Trigger: GGCAGATCCTGACCTGCCTCAGCTGCACCTTCCTGC...TGCAGAGCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR TCA 90 bp GGGTCAGGACCAGGCGCTGGCCCAGGCAAAGAGTGGCACGTTCACATCGGCAAGCCTGAAAGGGTCTTCTaGCGGCATACCCTGCTTTCC +
Preference number: 4 (lower is better)
Translates to: GSGPGAGPGKEWHVHIGKPERVF*RHTLLS
Trigger: GGAAAGCAGGGTATGCCGTCAGAAGACCCTTTCAGG...CTTGCCGATGTGAACGTGCCACTCTTTGCCTGGGCCAGCGCCTGGTCCTGACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp GGGTCAGGACCAGGCGCTGGCCCAGGCAAAGAGTGGCACGTTCACATCGGCAAGGTGGACGTCATTTCCTaGCGGTGGATCAGAGCTTCG +
Preference number: 4 (lower is better)
Translates to: GSGPGAGPGKEWHVHIGKVDVIS*RWIRAS
Trigger: CGAAGCTCTGATCCACCGGCAGGAAATGACGTCCAC...CTTGCCGATGTGAACGTGCCACTCTTTGCCTGGGCCAGCGCCTGGTCCTGACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp GGGTCAGGACCAGGCGCTGGCCCAGGCAAAGAGTGGCACGTTCACATCGGCAAGAGGCAAACATGTTCCTaGTGTCCTCCATGGCGAGCC +
Preference number: 4 (lower is better)
Translates to: GSGPGAGPGKEWHVHIGKRQTCS*CPPWRA
Trigger: GGCTCGCCATGGAGGACAGCAGGAACATGTTTGCCT...CTTGCCGATGTGAACGTGCCACTCTTTGCCTGGGCCAGCGCCTGGTCCTGACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp GGGTCAGGACCAGGCGCTGGCCCAGGCAAAGAGTGGCACGTTCACATCGGCAAGCTGGATGTCTTCTCCTaGAGGCCCAGGTCCAAAGTC +
Preference number: 4 (lower is better)
Translates to: GSGPGAGPGKEWHVHIGKLDVFS*RPRSKV
Trigger: GACTTTGGACCTGGGCCTGCAGGAGAAGACATCCAG...CTTGCCGATGTGAACGTGCCACTCTTTGCCTGGGCCAGCGCCTGGTCCTGACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp CTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCTCTGCAATGCCACTCGTTCGCTaGTCGGAGTGGCCGTGCTCG +
Preference number: 4 (lower is better)
Translates to: LGRLVHNQWIHAPPPSSAMPLVR*SEWPCS
Trigger: CGAGCACGGCCACTCCGACCAGCGAACGAGTGGCAT...TGCAGAGCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp CTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCTCTGCACGGCACTGGGGCTGGTaGGCACCACCGTGTAGTTCA +
Preference number: 4 (lower is better)
Translates to: LGRLVHNQWIHAPPPSSARHWGW*APPCSS
Trigger: TGAACTACACGGTGGTGCCCACCAGCCCCAGTGCCG...TGCAGAGCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp GGGTCAGGACCAGGCGCTGGCCCAGGCAAAGAGTGGCACGTTCACATCGGCAAGAGCAGGGTTATCCAGTaGTGCATCTCCTCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: GSGPGAGPGKEWHVHIGKSRVIQ*CISSGV
Trigger: CACCCCAGAGGAGATGCACCACTGGATAACCCTGCT...CTTGCCGATGTGAACGTGCCACTCTTTGCCTGGGCCAGCGCCTGGTCCTGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp CTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCTCTGCATCAGGGGCTGGGTGGTaGCCATGGATGACGGCTTCG +
Preference number: 4 (lower is better)
Translates to: LGRLVHNQWIHAPPPSSASGAGW*PWMTAS
Trigger: CGAAGCCGTCATCCATGGCCACCACCCAGCCCCTGA...TGCAGAGCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp ATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCCCCAGCCAGAGCTCCTaGGGGAAGCCGCCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: IRLGRLVHNQWIHAPPPSPSQSS*GKPPSL
Trigger: CAAAGAAGGCGGCTTCCCCCAGGAGCTCTGGCTGGG...GCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR TCA 90 bp CTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCTCTGCACTTGTCTCTGCCTCCTaGTGGGCACGGAGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: LGRLVHNQWIHAPPPSSALVSAS*WARRRS
Trigger: TGACCTCCTCCGTGCCCATCAGGAGGCAGAGACAAG...TGCAGAGCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR TCA 90 bp GGGTCAGGACCAGGCGCTGGCCCAGGCAAAGAGTGGCACGTTCACATCGGCAAGAAGTGCCATGGCCAATaGGTCTCTGCTATCTACGGC +
Preference number: 4 (lower is better)
Translates to: GSGPGAGPGKEWHVHIGKKCHGQ*VSAIYG
Trigger: GCCGTAGATAGCAGAGACTCATTGGCCATGGCACTT...CTTGCCGATGTGAACGTGCCACTCTTTGCCTGGGCCAGCGCCTGGTCCTGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp ATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCAGCTGCTGCAGCTTCTaGAGGGAGGCCTCGGTCAAC +
Preference number: 4 (lower is better)
Translates to: IRLGRLVHNQWIHAPPPSSCCSF*REASVN
Trigger: GTTGACCGAGGCCTCCCTGCAGAAGCTGCAGCAGCT...GCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp CTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCTCTGCAGGGAGCGCTCGATGTTaGGGACGCACTCGTCGATCT +
Preference number: 4 (lower is better)
Translates to: LGRLVHNQWIHAPPPSSAGSARC*GRTRRS
Trigger: AGATCGACGAGTGCGTCCGCAACATCGAGCGCTCCC...TGCAGAGCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp CTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCTCTGCACCACTCGAGGAGTTGTaGAGGCTAGCGGAGTCCTGC +
Preference number: 4 (lower is better)
Translates to: LGRLVHNQWIHAPPPSSAPLEEL*RLAESC
Trigger: GCAGGACTCCGCTAGCCTGCACAACTCCTCGAGTGG...TGCAGAGCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp ATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCCCCCCGCCTTTCTTGTaGAGCCAGCCTTGCTTGAGG +
Preference number: 4 (lower is better)
Translates to: IRLGRLVHNQWIHAPPPSPPPFL*SQPCLR
Trigger: CCTCAAGCAAGGCTGGCTGCACAAGAAAGGCGGGGG...GCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGAT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp ATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCGCCCGACATCCAGTGTaGCCACAGCATTCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: IRLGRLVHNQWIHAPPPSARHPV*PQHSGG
Trigger: ACCCCCAGAATGCTGTGGGCACACTGGATGTCGGGC...GCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp ATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCGTGTCCGCGTTACAGTaGAGCACCCGGTTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: IRLGRLVHNQWIHAPPPSVSALQ*STRLAV
Trigger: CACAGCCAACCGGGTGCTGCACTGTAACGCGGACAC...GCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp ATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCAAAGGTTGCCCACGCTaGCGGGATGGGGCACCTTGT +
Preference number: 4 (lower is better)
Translates to: IRLGRLVHNQWIHAPPPSKGCPR*RDGAPC
Trigger: ACAAGGTGCCCCATCCCGGCAGCGTGGGCAACCTTT...GCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp ATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCGCAATGGCGAAGATGTaGGGTGGAAGCTCGCCCAGG +
Preference number: 4 (lower is better)
Translates to: IRLGRLVHNQWIHAPPPSAMAKM*GGSSPR
Trigger: CCTGGGCGAGCTTCCACCGCACATCTTCGCCATTGC...GCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp GGGTCAGGACCAGGCGCTGGCCCAGGCAAAGAGTGGCACGTTCACATCGGCAAGAGGTGTCCTGGTTGTTaGGGCTGGAGACGTGTTCAA +
Preference number: 4 (lower is better)
Translates to: GSGPGAGPGKEWHVHIGKRCPGC*GWRRVQ
Trigger: TTGAACACGTCTCCAGCCGCAACAACCAGGACACCT...CTTGCCGATGTGAACGTGCCACTCTTTGCCTGGGCCAGCGCCTGGTCCTGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp GGGTCAGGACCAGGCGCTGGCCCAGGCAAAGAGTGGCACGTTCACATCGGCAAGGTGTCAGTCACATTCTaGATGGCGCTGGACCACCTA +
Preference number: 4 (lower is better)
Translates to: GSGPGAGPGKEWHVHIGKVSVTF*MALDHL
Trigger: TAGGTGGTCCAGCGCCATCCAGAATGTGACTGACAC...CTTGCCGATGTGAACGTGCCACTCTTTGCCTGGGCCAGCGCCTGGTCCTGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp CTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCTCTGCATCCTGCTGTCCTCCATaGCGAGCCCTCGGATCAGCT +
Preference number: 4 (lower is better)
Translates to: LGRLVHNQWIHAPPPSSASCCPP*RALGSA
Trigger: AGCTGATCCGAGGGCTCGCCATGGAGGACAGCAGGA...TGCAGAGCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp CTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCTCTGCAAGGGCAGCCAGCACTTaGAGGCTTTCCTCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: LGRLVHNQWIHAPPPSSARAAST*RLSSGA
Trigger: AGCCCCTGAGGAAAGCCTCCAAGTGCTGGCTGCCCT...TGCAGAGCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp GGGTCAGGACCAGGCGCTGGCCCAGGCAAAGAGTGGCACGTTCACATCGGCAAGCCTGGTTGTTGCGGCTaGAGACGTGTTCAAAGAGGT +
Preference number: 4 (lower is better)
Translates to: GSGPGAGPGKEWHVHIGKPGCCG*RRVQRG
Trigger: ACCTCTTTGAACACGTCTCCAGCCGCAACAACCAGG...CTTGCCGATGTGAACGTGCCACTCTTTGCCTGGGCCAGCGCCTGGTCCTGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR TCA 90 bp CTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCTCTGCACTTCCACGGTGCCCTTaGGCTTCTCCTCGCTATCGT +
Preference number: 4 (lower is better)
Translates to: LGRLVHNQWIHAPPPSSALPRCP*ASPRYR
Trigger: ACGATAGCGAGGAGAAGCTCAAGGGCACCGTGGAAG...TGCAGAGCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR TCA 90 bp CTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCTCTGCAGTGGACGAGTGGACCTaGCTCAGCACGCTGAACCAT +
Preference number: 4 (lower is better)
Translates to: LGRLVHNQWIHAPPPSSAVDEWT*LSTLNH
Trigger: ATGGTTCAGCGTGCTGAGTCAGGTCCACTCGTCCAC...TGCAGAGCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp ATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCAGGTCGTGCCCGGTCTaGAGGATGCCCTGGATGATA +
Preference number: 4 (lower is better)
Translates to: IRLGRLVHNQWIHAPPPSRSCPV*RMPWMI
Trigger: TATCATCCAGGGCATCCTGCAGACCGGGCACGACCT...GCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp CTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCTCTGCAAGTGCATCTGTGAGCTaGGTTGGGTCCAGCCCAAGC +
Preference number: 4 (lower is better)
Translates to: LGRLVHNQWIHAPPPSSASASVS*VGSSPS
Trigger: GCTTGGGCTGGACCCAACGCAGCTCACAGATGCACT...TGCAGAGCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp ATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCGTGGTGCATCTCCTCTaGGGTGTCCGCGTTACAGTG +
Preference number: 4 (lower is better)
Translates to: IRLGRLVHNQWIHAPPPSVVHLL*GVRVTV
Trigger: CACTGTAACGCGGACACCCCAGAGGAGATGCACCAC...GCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp ATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCCCCTGGTGTCCCCCTTaGATCTCTGCAGCAGGGTTA +
Preference number: 4 (lower is better)
Translates to: IRLGRLVHNQWIHAPPPSPWCPP*ISAAGL
Trigger: TAACCCTGCTGCAGAGATCCAAGGGGGACACCAGGG...GCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp ATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCGTCTGCAGGATGCCCTaGATGATAGGGATGGGGTCG +
Preference number: 4 (lower is better)
Translates to: IRLGRLVHNQWIHAPPPSVCRMP*MIGMGS
Trigger: CGACCCCATCCCTATCATCCAGGGCATCCTGCAGAC...GCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp GGGTCAGGACCAGGCGCTGGCCCAGGCAAAGAGTGGCACGTTCACATCGGCAAGAGCATTCGTTGGCAATaGCGAAGATGTGCGGTGGAA +
Preference number: 4 (lower is better)
Translates to: GSGPGAGPGKEWHVHIGKSIRWQ*RRCAVE
Trigger: TTCCACCGCACATCTTCGCCATTGCCAACGAATGCT...CTTGCCGATGTGAACGTGCCACTCTTTGCCTGGGCCAGCGCCTGGTCCTGACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR TCA 90 bp CCCTCATTTGCAGGAAATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCAGGACTGCGCCCCTTCTaGGCTGAACCGGTACGCTCC +
Preference number: 4 (lower is better)
Translates to: PSFAGNQAGEVSAQSVDPGLRPF*AEPVRS
Trigger: GGAGCGTACCGGTTCAGCTCAGAAGGGGCGCAGTCC...TGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGATTTCCTGCAAATGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR TCA 90 bp CTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCTCTGCATCTTCCACTTGTCAATaGTGCTGGTGCGAGCCGAGC +
Preference number: 4 (lower is better)
Translates to: LGRLVHNQWIHAPPPSSASSTCQ*CWCEPS
Trigger: GCTCGGCTCGCACCAGCATCATTGACAAGTGGAAGA...TGCAGAGCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp CTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCTCTGCAGCTTCCAGTTCTTGCTaGCTCCTTGTCTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: LGRLVHNQWIHAPPPSSAASSSC*LLVSAS
Trigger: GGAGGCAGAGACAAGGAGGCAGCAAGAACTGGAAGC...TGCAGAGCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp ATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCCCTGCCGCTCCTTCATaGGCTGCAGATCCTCGATTT +
Preference number: 4 (lower is better)
Translates to: IRLGRLVHNQWIHAPPPSPAAPS*AADPRF
Trigger: AAATCGAGGATCTGCAGCGCATGAAGGAGCGGCAGG...GCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp CCCTCATTTGCAGGAAATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCACGTCGCTCGTCCGGATaGCACTCGTTCGCTGGTCGG +
Preference number: 4 (lower is better)
Translates to: PSFAGNQAGEVSAQSVDPRRSSG*HSFAGR
Trigger: CCGACCAGCGAACGAGTGGCATCCGGACGAGCGACG...TGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGATTTCCTGCAAATGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp ATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCAGGGTTATCCAGTGGTaGATCTCCTCTGGGGTGTCC +
Preference number: 4 (lower is better)
Translates to: IRLGRLVHNQWIHAPPPSRVIQW*ISSGVS
Trigger: GGACACCCCAGAGGAGATGCACCACTGGATAACCCT...GCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp CTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCTCTGCATCCCCCTTGGATCTCTaGAGCAGGGTTATCCAGTGG +
Preference number: 4 (lower is better)
Translates to: LGRLVHNQWIHAPPPSSASPLDL*SRVIQW
Trigger: CCACTGGATAACCCTGCTGCAGAGATCCAAGGGGGA...TGCAGAGCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp CTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCTCTGCAGTGGACGTCATTTCCTaGCGGTGGATCAGAGCTTCG +
Preference number: 4 (lower is better)
Translates to: LGRLVHNQWIHAPPPSSAVDVIS*RWIRAS
Trigger: CGAAGCTCTGATCCACCGGCAGGAAATGACGTCCAC...TGCAGAGCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp ATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCCGCTGTCTTTTGGCATaGTGTCGGTGTCCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: IRLGRLVHNQWIHAPPPSRCLLA*CRCPGS
Trigger: GCTTCCTGGACACCGACAGCATGCCAAAAGACAGCG...GCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp GGGTCAGGACCAGGCGCTGGCCCAGGCAAAGAGTGGCACGTTCACATCGGCAAGTCCTGGTTCATCCCCTaGAGTTTCTTCCACTTGTCA +
Preference number: 4 (lower is better)
Translates to: GSGPGAGPGKEWHVHIGKSWFIP*SFFHLS
Trigger: TGACAAGTGGAAGAAACTGCAGGGGATGAACCAGGA...CTTGCCGATGTGAACGTGCCACTCTTTGCCTGGGCCAGCGCCTGGTCCTGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp CTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCTCTGCAGGATCTCTGGGTCAGTaGATCTGTGAGCTGCGTTGG +
Preference number: 4 (lower is better)
Translates to: LGRLVHNQWIHAPPPSSAGSLGQ*ICELRW
Trigger: CCAACGCAGCTCACAGATGCACTGACCCAGAGATCC...TGCAGAGCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp ATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCTGGGCCGCCGGTGTTTaGTTCCGCATTTCAAGGTGT +
Preference number: 4 (lower is better)
Translates to: IRLGRLVHNQWIHAPPPSWAAGV*FRISRC
Trigger: ACACCTTGAAATGCGGAAGCAAACACCGGCGGCCCA...GCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp ATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCAAGTCCGCTTCCCTCTaGCTCTTCTGCAAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: IRLGRLVHNQWIHAPPPSKSASL*LFCKAS
Trigger: GGAAGCCTTGCAGAAGAGCCAGAGGGAAGCGGACTT...GCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp CCCTCATTTGCAGGAAATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCAGTTCGCTGGTCGGAGTaGCCGTGCTCGCTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: PSFAGNQAGEVSAQSVDPVRWSE*PCSLGL
Trigger: CAACCCCAGCGAGCACGGCCACTCCGACCAGCGAAC...TGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGATTTCCTGCAAATGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp CCCTCATTTGCAGGAAATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCATCCTCCGGGACAGCGTaGAGGAGCCCCCGCCTTTCT +
Preference number: 4 (lower is better)
Translates to: PSFAGNQAGEVSAQSVDPSSGTA*RSPRLS
Trigger: AGAAAGGCGGGGGCTCCTCCACGCTGTCCCGGAGGA...TGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGATTTCCTGCAAATGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp CCCTCATTTGCAGGAAATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCAGCTGGGTGGTGGCCATaGATGACGGCTTCGTGGGCC +
Preference number: 4 (lower is better)
Translates to: PSFAGNQAGEVSAQSVDPAGWWP*MTASWA
Trigger: GGCCCACGAAGCCGTCATCCATGGCCACCACCCAGC...TGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGATTTCCTGCAAATGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp ATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCGGCTGCTTTGAAGGATaGCTTGCTCGACGCTGGATG +
Preference number: 4 (lower is better)
Translates to: IRLGRLVHNQWIHAPPPSGCFEG*LARRWM
Trigger: CATCCAGCGTCGAGCAAGCCATCCTTCAAAGCAGCC...GCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR TCA 90 bp ATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCCGATCTCGTCGAAGTTaGGCGACTCCAAGAACTCCT +
Preference number: 4 (lower is better)
Translates to: IRLGRLVHNQWIHAPPPSRSRRS*ATPRTP
Trigger: AGGAGTTCTTGGAGTCGCTCAACTTCGACGAGATCG...GCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR TCA 90 bp CTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCTCTGCACGATCTCGTCGAAGTTaGGCGACTCCAAGAACTCCT +
Preference number: 4 (lower is better)
Translates to: LGRLVHNQWIHAPPPSSARSRRS*ATPRTP
Trigger: AGGAGTTCTTGGAGTCGCTCAACTTCGACGAGATCG...TGCAGAGCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR TCA 90 bp CCCTCATTTGCAGGAAATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCAAGTCACGCTGCTGCCTaGCGTGATGGCGCCATCCTC +
Preference number: 4 (lower is better)
Translates to: PSFAGNQAGEVSAQSVDPSHAAA*RDGAIL
Trigger: GAGGATGGCGCCATCACGTCAGGCAGCAGCGTGACT...TGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGATTTCCTGCAAATGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR TCA 90 bp CCCTCATTTGCAGGAAATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCAGCAGGAAGGTGCAGCTaGGGCAGGTCAGGATCTGCC +
Preference number: 4 (lower is better)
Translates to: PSFAGNQAGEVSAQSVDPAGRCS*GRSGSA
Trigger: GGCAGATCCTGACCTGCCTCAGCTGCACCTTCCTGC...TGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGATTTCCTGCAAATGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR TCA 90 bp CTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCTCTGCAGGAAAAGGTTGTACATaGTGGAGCCCCCATGGAGCT +
Preference number: 4 (lower is better)
Translates to: LGRLVHNQWIHAPPPSSAGKGCT*WSPHGA
Trigger: AGCTCCATGGGGGCTCCATCATGTACAACCTTTTCC...TGCAGAGCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp ATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCAAGGCTTCCAGTTCTTaGTGCCTCCTTGTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: IRLGRLVHNQWIHAPPPSKASSS*CLLVSA
Trigger: GGCAGAGACAAGGAGGCAGCAAGAACTGGAAGCCTT...GCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp CTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCTCTGCACGCTCCTTCATGCGCTaGAGATCCTCGATTTCCTTC +
Preference number: 4 (lower is better)
Translates to: LGRLVHNQWIHAPPPSSARSFMR*RSSISF
Trigger: GAAGGAAATCGAGGATCTGCAGCGCATGAAGGAGCG...TGCAGAGCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp ATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCTCTTCAAAGGAGGACTaGGCCCCTTCTGAGCTGAAC +
Preference number: 4 (lower is better)
Translates to: IRLGRLVHNQWIHAPPPSSSKED*APSELN
Trigger: GTTCAGCTCAGAAGGGGCGCAGTCCTCCTTTGAAGA...GCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp CTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCTCTGCACCTCGCAGTTGCTTCTaGAACACGATGGCTGCCTTT +
Preference number: 4 (lower is better)
Translates to: LGRLVHNQWIHAPPPSSAPRSCF*NTMAAF
Trigger: AAAGGCAGCCATCGTGTTCCAGAAGCAACTGCGAGG...TGCAGAGCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp GAGTGTGTGAACACATGCATGCGCGGGCAAGCACAGACAGTTGAAACAAAGCAAGTTCGCTGGTCGGAGTaGCCGTGCTCGCTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: ECVNTCMRGQAQTVETKQVRWSE*PCSLGL
Trigger: CAACCCCAGCGAGCACGGCCACTCCGACCAGCGAAC...TTGCTTTGTTTCAACTGTCTGTGCTTGCCCGCGCATGCATGTGTTCACACACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp CCCTCATTTGCAGGAAATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCATGTCGGCACTGGGGCTaGTGGGCACCACCGTGTAGT +
Preference number: 4 (lower is better)
Translates to: PSFAGNQAGEVSAQSVDPCRHWG*WAPPCS
Trigger: ACTACACGGTGGTGCCCACCAGCCCCAGTGCCGACA...TGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGATTTCCTGCAAATGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp ATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCGGCTTCCATAGGAGTTaGAGAAAGTCACGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: IRLGRLVHNQWIHAPPPSGFHRS*RKSRCC
Trigger: GCAGCAGCGTGACTTTCTCCAACTCCTATGGAAGCC...GCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp CTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCTCTGCATACATCAGCTTCGACTaGCGAAGGACAAACCAGCGC +
Preference number: 4 (lower is better)
Translates to: LGRLVHNQWIHAPPPSSAYISFD*RRTNQR
Trigger: GCGCTGGTTTGTCCTTCGCCAGTCGAAGCTGATGTA...TGCAGAGCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp CTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCTCTGCACTCCATCTCGGTTCCTaGGAACTGTTCCCGTATCCT +
Preference number: 4 (lower is better)
Translates to: LGRLVHNQWIHAPPPSSALHLGS*ELFPYP
Trigger: AGGATACGGGAACAGTTCCCAGGAACCGAGATGGAG...TGCAGAGCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp CCCTCATTTGCAGGAAATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCATCCTCAGGGGCTGGGTaGTGGCCATGGATGACGGCT +
Preference number: 4 (lower is better)
Translates to: PSFAGNQAGEVSAQSVDPSSGAG*WPWMTA
Trigger: AGCCGTCATCCATGGCCACCACCCAGCCCCTGAGGA...TGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGATTTCCTGCAAATGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp CCCTCATTTGCAGGAAATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCAGGCGAAGATGTGCGGTaGAAGCTCGCCCAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: PSFAGNQAGEVSAQSVDPGEDVR*KLAQVA
Trigger: TGCCACCTGGGCGAGCTTCCACCGCACATCTTCGCC...TGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGATTTCCTGCAAATGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp GGGTCAGGACCAGGCGCTGGCCCAGGCAAAGAGTGGCACGTTCACATCGGCAAGCTGATCAAACTGGTCTaGCATCTTCTGTGTGTTTGG +
Preference number: 4 (lower is better)
Translates to: GSGPGAGPGKEWHVHIGKLIKLV*HLLCVW
Trigger: CCAAACACACAGAAGATGCCAGACCAGTTTGATCAG...CTTGCCGATGTGAACGTGCCACTCTTTGCCTGGGCCAGCGCCTGGTCCTGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR TCA 90 bp CTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCTCTGCAGGAAATAGGGCAGTGTaGCGCAGCTATACACAGAGT +
Preference number: 4 (lower is better)
Translates to: LGRLVHNQWIHAPPPSSAGNRAV*RSYTQS
Trigger: ACTCTGTGTATAGCTGCGTCACACTGCCCTATTTCC...TGCAGAGCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR TCA 90 bp ATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCCATCATGCATTTCTCTaGTCTCCTGGTCTGTGGACG +
Preference number: 4 (lower is better)
Translates to: IRLGRLVHNQWIHAPPPSHHAFL*SPGLWT
Trigger: CGTCCACAGACCAGGAGATCAGAGAAATGCATGATG...GCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR TCA 90 bp GAGTGTGTGAACACATGCATGCGCGGGCAAGCACAGACAGTTGAAACAAAGCAAGGGTCAGTGCATCTGTaGGCTGCGTTGGGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: ECVNTCMRGQAQTVETKQGSVHL*AALGPA
Trigger: GGCTGGACCCAACGCAGCTCACAGATGCACTGACCC...TTGCTTTGTTTCAACTGTCTGTGCTTGCCCGCGCATGCATGTGTTCACACACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR TCA 90 bp CTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCTCTGCATCACGCCAAAATTGTTaGCTGCAACGCGGGGTTTCA +
Preference number: 4 (lower is better)
Translates to: LGRLVHNQWIHAPPPSSASRQNC*LQRGVS
Trigger: TGAAACCCCGCGTTGCAGTCAACAATTTTGGCGTGA...TGCAGAGCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR TCA 90 bp ATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCTTGAGCACTACCACCTaGTCAAACTGGTCTGGCATC +
Preference number: 4 (lower is better)
Translates to: IRLGRLVHNQWIHAPPPSLSTTT*SNWSGI
Trigger: GATGCCAGACCAGTTTGATCAGGTGGTAGTGCTCAA...GCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp CCCTCATTTGCAGGAAATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCAGCTGCCTGTAAACCCTaGGTGCCAGCTGTCCTCGCA +
Preference number: 4 (lower is better)
Translates to: PSFAGNQAGEVSAQSVDPAACKP*VPAVLA
Trigger: TGCGAGGACAGCTGGCACGCAGGGTTTACAGGCAGC...TGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGATTTCCTGCAAATGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp ATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCTGCTTGTTCTCCCTTTaGTTTTCCAGCTCCCTGGTC +
Preference number: 4 (lower is better)
Translates to: IRLGRLVHNQWIHAPPPSCLFSL*FSSSLV
Trigger: GACCAGGGAGCTGGAAAAGCAAAGGGAGAACAAGCA...GCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp TCAGTAGCACAGTTAAGGTCGATTAGGGTCCACTCTGCAAGTTTAAGGCACTTCTGGTCGGAGTGGCCGTaGTCGCTGGGGTTGGGCGAG +
Preference number: 4 (lower is better)
Translates to: SVAQLRSIRVHSASLRHFWSEWP*SLGLGE
Trigger: CTCGCCCAACCCCAGCGAGCACGGCCACTCCGACCA...GAAGTGCCTTAAACTTGCAGAGTGGACCCTAATCGACCTTAACTGTGCTACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp ATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCGGAAGCCGCCTTCTTTaGACTCCACATCAAAGAGTG +
Preference number: 4 (lower is better)
Translates to: IRLGRLVHNQWIHAPPPSGSRLL*TPHQRV
Trigger: CACTCTTTGATGTGGAGTGCAAAGAAGGCGGCTTCC...GCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp GAGTGTGTGAACACATGCATGCGCGGGCAAGCACAGACAGTTGAAACAAAGCAACGCCCAGGTGGCACCTaGTGTACTCCTCCATGGTGG +
Preference number: 4 (lower is better)
Translates to: ECVNTCMRGQAQTVETKQRPGGT*CTPPWW
Trigger: CCACCATGGAGGAGTACAGCAGGTGCCACCTGGGCG...TTGCTTTGTTTCAACTGTCTGTGCTTGCCCGCGCATGCATGTGTTCACACACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp CTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCTCTGCAGCTTCTGGAACACGATaGCTGCCTTTTTCAGGTGCA +
Preference number: 4 (lower is better)
Translates to: LGRLVHNQWIHAPPPSSAASGTR*LPFSGA
Trigger: TGCACCTGAAAAAGGCAGCCATCGTGTTCCAGAAGC...TGCAGAGCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp CTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCTCTGCAGCTGAAGTTGAAGTTTaGCTTCTCTCCGCTGGCACT +
Preference number: 4 (lower is better)
Translates to: LGRLVHNQWIHAPPPSSAAEVEV*LLSAGT
Trigger: AGTGCCAGCGGAGAGAAGCCAAACTTCAACTTCAGC...TGCAGAGCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp ATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCCATGGCAATACACTGTaGACGTCATTTCCTGCCGGT +
Preference number: 4 (lower is better)
Translates to: IRLGRLVHNQWIHAPPPSHGNTL*TSFPAG
Trigger: ACCGGCAGGAAATGACGTCCACAGTGTATTGCCATG...GCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp GAGTGTGTGAACACATGCATGCGCGGGCAAGCACAGACAGTTGAAACAAAGCAATCCTCAGGGGCTGGGTaGTGGCCATGGATGACGGCT +
Preference number: 4 (lower is better)
Translates to: ECVNTCMRGQAQTVETKQSSGAG*WPWMTA
Trigger: AGCCGTCATCCATGGCCACCACCCAGCCCCTGAGGA...TTGCTTTGTTTCAACTGTCTGTGCTTGCCCGCGCATGCATGTGTTCACACACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp CCCTCATTTGCAGGAAATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCAAGGGCAGCCAGCACTTaGAGGCTTTCCTCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: PSFAGNQAGEVSAQSVDPRAAST*RLSSGA
Trigger: AGCCCCTGAGGAAAGCCTCCAAGTGCTGGCTGCCCT...TGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGATTTCCTGCAAATGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp GAGTGTGTGAACACATGCATGCGCGGGCAAGCACAGACAGTTGAAACAAAGCAAAACCTCCTCGAGGGGTaGGATGGAGGTGTGCGGGGT +
Preference number: 4 (lower is better)
Translates to: ECVNTCMRGQAQTVETKQNLLEG*DGGVRG
Trigger: ACCCCGCACACCTCCATCCCACCCCTCGAGGAGGTT...TTGCTTTGTTTCAACTGTCTGTGCTTGCCCGCGCATGCATGTGTTCACACACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp GAGTGTGTGAACACATGCATGCGCGGGCAAGCACAGACAGTTGAAACAAAGCAACCCAGCCAGAGCTCCTaGGGGAAGCCGCCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: ECVNTCMRGQAQTVETKQPSQSS*GKPPSL
Trigger: CAAAGAAGGCGGCTTCCCCCAGGAGCTCTGGCTGGG...TTGCTTTGTTTCAACTGTCTGTGCTTGCCCGCGCATGCATGTGTTCACACACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp CTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCTCTGCATGCTCACAGAGCGTGTaGTGCTATAGCGCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: LGRLVHNQWIHAPPPSSACSQSV*CYSASS
Trigger: TGAAGAAGCGCTATAGCACCACACGCTCTGTGAGCA...TGCAGAGCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp ATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCTGCTCACAGAGCGTGTaGTGCTATAGCGCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: IRLGRLVHNQWIHAPPPSCSQSV*CYSASS
Trigger: TGAAGAAGCGCTATAGCACCACACGCTCTGTGAGCA...GCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp GAGTGTGTGAACACATGCATGCGCGGGCAAGCACAGACAGTTGAAACAAAGCAACACCTGGAGCTGCCCTaGCTGCTCACAGAGCGTGTG +
Preference number: 4 (lower is better)
Translates to: ECVNTCMRGQAQTVETKQHLELP*LLTERV
Trigger: CACACGCTCTGTGAGCAGCCAGGGCAGCTCCAGGTG...TTGCTTTGTTTCAACTGTCTGTGCTTGCCCGCGCATGCATGTGTTCACACACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp CCCTCATTTGCAGGAAATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCATGTACTCCTCCATGGTaGCGCGCTCGTACAGGCCAG +
Preference number: 4 (lower is better)
Translates to: PSFAGNQAGEVSAQSVDPCTPPW*RARTGQ
Trigger: CTGGCCTGTACGAGCGCGCCACCATGGAGGAGTACA...TGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGATTTCCTGCAAATGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp ATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCACACATTGGTTGTCATaGCGCTTCCACAAGCAGCGA +
Preference number: 4 (lower is better)
Translates to: IRLGRLVHNQWIHAPPPSTHWLS*RFHKQR
Trigger: TCGCTGCTTGTGGAAGCGCCATGACAACCAATGTGT...GCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp ATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCCTGATGAGGACACATTaGTTGTCATGGCGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: IRLGRLVHNQWIHAPPPSLMRTH*LSWRFH
Trigger: GTGGAAGCGCCATGACAACCAATGTGTCCTCATCAG...GCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR TCA 90 bp GAGTGTGTGAACACATGCATGCGCGGGCAAGCACAGACAGTTGAAACAAAGCAACTTGTCTCTGCCTCCTaGTGGGCACGGAGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: ECVNTCMRGQAQTVETKQLVSAS*WARRRS
Trigger: TGACCTCCTCCGTGCCCATCAGGAGGCAGAGACAAG...TTGCTTTGTTTCAACTGTCTGTGCTTGCCCGCGCATGCATGTGTTCACACACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR TCA 90 bp ATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCGTCTGTTTGATGAGCTaGCAATACAGTTCATCCCGC +
Preference number: 4 (lower is better)
Translates to: IRLGRLVHNQWIHAPPPSVCLMS*QYSSSR
Trigger: GCGGGATGAACTGTATTGTCAGCTCATCAAACAGAC...GCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp CTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCTCTGCAAGGTCAGCTTCTCTTTaGGCTCGCTCTCTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: LGRLVHNQWIHAPPPSSARSASL*ARSLSL
Trigger: AAGAGAAAGAGAGCGAGCGCAAAGAGAAGCTGACCT...TGCAGAGCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp ATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCAGACTTCTAACGGTTTaGCCTCTCCACGCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: IRLGRLVHNQWIHAPPPSRLLTV*PLHACR
Trigger: TCTACAAGCGTGGAGAGGGCAAACCGTTAGAAGTCT...GCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp CTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCTCTGCACCGAACGAGAGGATGTaGTCATACTGGAAGACTTCT +
Preference number: 4 (lower is better)
Translates to: LGRLVHNQWIHAPPPSSAPNERM*SYWKTS
Trigger: AGAAGTCTTCCAGTATGAGCACATCCTCTCGTTCGG...TGCAGAGCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp ATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCTCACAGAGCGTGTGGTaGTATAGCGCTTCTTCACAA +
Preference number: 4 (lower is better)
Translates to: IRLGRLVHNQWIHAPPPSSQSVW*YSASSQ
Trigger: TTGTGAAGAAGCGCTATAGCACCACACGCTCTGTGA...GCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp CTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCTCTGCATCCTCCTTGCTGAATTaGATGACTTCCATTGCCGTG +
Preference number: 4 (lower is better)
Translates to: LGRLVHNQWIHAPPPSSASSLLN*MTSIAV
Trigger: CACGGCAATGGAAGTCATGCAATTCAGCAAGGAGGA...TGCAGAGCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp TCAGTAGCACAGTTAAGGTCGATTAGGGTCCACTCTGCAAGTTTAAGGCACTTCGACTCCAAGAACTCCTaGGCGGCGCGGCAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: SVAQLRSIRVHSASLRHFDSKNS*AARQAS
Trigger: TGAGGCCTGCCGCGCCGCCCAGGAGTTCTTGGAGTC...GAAGTGCCTTAAACTTGCAGAGTGGACCCTAATCGACCTTAACTGTGCTACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp GAGTGTGTGAACACATGCATGCGCGGGCAAGCACAGACAGTTGAAACAAAGCAAGCGGCATGCAGTAGGTaGACTCCCCACTCGAGGAGT +
Preference number: 4 (lower is better)
Translates to: ECVNTCMRGQAQTVETKQAACSR*TPHSRS
Trigger: ACTCCTCGAGTGGGGAGTCCACCTACTGCATGCCGC...TTGCTTTGTTTCAACTGTCTGTGCTTGCCCGCGCATGCATGTGTTCACACACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp TCAGTAGCACAGTTAAGGTCGATTAGGGTCCACTCTGCAAGTTTAAGGCACTTCTCCTCCGGGACAGCGTaGAGGAGCCCCCGCCTTTCT +
Preference number: 4 (lower is better)
Translates to: SVAQLRSIRVHSASLRHFSSGTA*RSPRLS
Trigger: AGAAAGGCGGGGGCTCCTCCACGCTGTCCCGGAGGA...GAAGTGCCTTAAACTTGCAGAGTGGACCCTAATCGACCTTAACTGTGCTACTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp CTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCTCTGCATGTCGATTGGAGCCTTaGTGTCAGTCACATTCTGGA +
Preference number: 4 (lower is better)
Translates to: LGRLVHNQWIHAPPPSSACRLEP*CQSHSG
Trigger: TCCAGAATGTGACTGACACCAAGGCTCCAATCGACA...TGCAGAGCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp CCCTCATTTGCAGGAAATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCAGTCTGCAGGATGCCCTaGATGATAGGGATGGGGTCG +
Preference number: 4 (lower is better)
Translates to: PSFAGNQAGEVSAQSVDPVCRMP*MIGMGS
Trigger: CGACCCCATCCCTATCATCCAGGGCATCCTGCAGAC...TGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGATTTCCTGCAAATGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp GAGTGTGTGAACACATGCATGCGCGGGCAAGCACAGACAGTTGAAACAAAGCAATCCTGCTGTCCTCCATaGCGAGCCCTCGGATCAGCT +
Preference number: 4 (lower is better)
Translates to: ECVNTCMRGQAQTVETKQSCCPP*RALGSA
Trigger: AGCTGATCCGAGGGCTCGCCATGGAGGACAGCAGGA...TTGCTTTGTTTCAACTGTCTGTGCTTGCCCGCGCATGCATGTGTTCACACACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp TCAGTAGCACAGTTAAGGTCGATTAGGGTCCACTCTGCAAGTTTAAGGCACTTCGCTGGGTGGTGGCCATaGATGACGGCTTCGTGGGCC +
Preference number: 4 (lower is better)
Translates to: SVAQLRSIRVHSASLRHFAGWWP*MTASWA
Trigger: GGCCCACGAAGCCGTCATCCATGGCCACCACCCAGC...GAAGTGCCTTAAACTTGCAGAGTGGACCCTAATCGACCTTAACTGTGCTACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp GAGTGTGTGAACACATGCATGCGCGGGCAAGCACAGACAGTTGAAACAAAGCAACCTCGAGGGGTGGGATaGAGGTGTGCGGGGTATAGT +
Preference number: 4 (lower is better)
Translates to: ECVNTCMRGQAQTVETKQPRGVG*RCAGYS
Trigger: ACTATACCCCGCACACCTCCATCCCACCCCTCGAGG...TTGCTTTGTTTCAACTGTCTGTGCTTGCCCGCGCATGCATGTGTTCACACACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp ATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCCCATATACTTGGCCATaGCTTGTTCCTGGTTCATCC +
Preference number: 4 (lower is better)
Translates to: IRLGRLVHNQWIHAPPPSPYTWP*LVPGSS
Trigger: GGATGAACCAGGAACAAGCCATGGCCAAGTATATGG...GCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp CCCTCATTTGCAGGAAATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCACTATCTACGGCCTGCTaGACACTGAGAGGCGTCAGG +
Preference number: 4 (lower is better)
Translates to: PSFAGNQAGEVSAQSVDPLSTAC*TLRGVR
Trigger: CCTGACGCCTCTCAGTGTCCAGCAGGCCGTAGATAG...TGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGATTTCCTGCAAATGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR TCA 90 bp CCCTCATTTGCAGGAAATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCACCTGACTCAGCACGCTaGACCATTGGCTGGCATCTT +
Preference number: 4 (lower is better)
Translates to: PSFAGNQAGEVSAQSVDPPDSAR*TIGWHL
Trigger: AAGATGCCAGCCAATGGTTCAGCGTGCTGAGTCAGG...TGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGATTTCCTGCAAATGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR TCA 90 bp CCCTCATTTGCAGGAAATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCATCTTCCACTTGTCAATaGTGCTGGTGCGAGCCGAGC +
Preference number: 4 (lower is better)
Translates to: PSFAGNQAGEVSAQSVDPSSTCQ*CWCEPS
Trigger: GCTCGGCTCGCACCAGCATCATTGACAAGTGGAAGA...TGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGATTTCCTGCAAATGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR TCA 90 bp ATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCTGGTTATTAGCATGCTaGCTGTGTAGCTTCTCCAAC +
Preference number: 4 (lower is better)
Translates to: IRLGRLVHNQWIHAPPPSWLLAC*LCSFSN
Trigger: GTTGGAGAAGCTACACAGTCAGCATGCTAATAACCA...GCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp CCCTCATTTGCAGGAAATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCAGCTTCCAGTTCTTGCTaGCTCCTTGTCTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: PSFAGNQAGEVSAQSVDPASSSC*LLVSAS
Trigger: GGAGGCAGAGACAAGGAGGCAGCAAGAACTGGAAGC...TGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGATTTCCTGCAAATGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp CTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCTCTGCATTTGCCTGCTCATCATaGATTTCTCTGATCTCCTGG +
Preference number: 4 (lower is better)
Translates to: LGRLVHNQWIHAPPPSSAFACSS*ISLISW
Trigger: CCAGGAGATCAGAGAAATGCATGATGAGCAGGCAAA...TGCAGAGCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp GAGTGTGTGAACACATGCATGCGCGGGCAAGCACAGACAGTTGAAACAAAGCAATCCTCGTGCAGGGGGTaGATAGCTGTCACCTTCTGG +
Preference number: 4 (lower is better)
Translates to: ECVNTCMRGQAQTVETKQSSCRG*IAVTFW
Trigger: CCAGAAGGTGACAGCTATGCACCCCCTGCACGAGGA...TTGCTTTGTTTCAACTGTCTGTGCTTGCCCGCGCATGCATGTGTTCACACACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp CTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCTCTGCAGCCAAAATTGTTGACTaGAACGCGGGGTTTCACATA +
Preference number: 4 (lower is better)
Translates to: LGRLVHNQWIHAPPPSSAAKIVD*NAGFHI
Trigger: TATGTGAAACCCCGCGTTGCAGTCAACAATTTTGGC...TGCAGAGCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp CTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCTCTGCACTCTTTTCCAGTTTCTaGTCCAAGGATTCTCGAAGG +
Preference number: 4 (lower is better)
Translates to: LGRLVHNQWIHAPPPSSALFSSF*SKDSRR
Trigger: CCTTCGAGAATCCTTGGAGCAGAAACTGGAAAAGAG...TGCAGAGCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp TCAGTAGCACAGTTAAGGTCGATTAGGGTCCACTCTGCAAGTTTAAGGCACTTCTGTCGGCACTGGGGCTaGTGGGCACCACCGTGTAGT +
Preference number: 4 (lower is better)
Translates to: SVAQLRSIRVHSASLRHFCRHWG*WAPPCS
Trigger: ACTACACGGTGGTGCCCACCAGCCCCAGTGCCGACA...GAAGTGCCTTAAACTTGCAGAGTGGACCCTAATCGACCTTAACTGTGCTACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp GAGTGTGTGAACACATGCATGCGCGGGCAAGCACAGACAGTTGAAACAAAGCAACCCTGGTGTCCCCCTTaGATCTCTGCAGCAGGGTTA +
Preference number: 4 (lower is better)
Translates to: ECVNTCMRGQAQTVETKQPWCPP*ISAAGL
Trigger: TAACCCTGCTGCAGAGATCCAAGGGGGACACCAGGG...TTGCTTTGTTTCAACTGTCTGTGCTTGCCCGCGCATGCATGTGTTCACACACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp CCCTCATTTGCAGGAAATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCAGGATGGGGTCGGACATaGACTCCAGTTGTTGGAGAG +
Preference number: 4 (lower is better)
Translates to: PSFAGNQAGEVSAQSVDPGWGRT*TPVVGE
Trigger: CTCTCCAACAACTGGAGTCCATGTCCGACCCCATCC...TGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGATTTCCTGCAAATGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp ATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCGTACTCGGAAAATGCTaGCCATTTTCTCTTAGCCAG +
Preference number: 4 (lower is better)
Translates to: IRLGRLVHNQWIHAPPPSVLGKC*PFSLSQ
Trigger: CTGGCTAAGAGAAAATGGCCAGCATTTTCCGAGTAC...GCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp CCCTCATTTGCAGGAAATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCAAAGGCTTCCAGTTCTTaGTGCCTCCTTGTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: PSFAGNQAGEVSAQSVDPKASSS*CLLVSA
Trigger: GGCAGAGACAAGGAGGCAGCAAGAACTGGAAGCCTT...TGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGATTTCCTGCAAATGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp CCCTCATTTGCAGGAAATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCATCCCTCTGGCTCTTCTaGAAGGCTTCCAGTTCTTGC +
Preference number: 4 (lower is better)
Translates to: PSFAGNQAGEVSAQSVDPSLWLF*KASSSC
Trigger: GCAAGAACTGGAAGCCTTGCAGAAGAGCCAGAGGGA...TGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGATTTCCTGCAAATGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp TCAGTAGCACAGTTAAGGTCGATTAGGGTCCACTCTGCAAGTTTAAGGCACTTCAGCTGCTGCAGCTTCTaGAGGGAGGCCTCGGTCAAC +
Preference number: 4 (lower is better)
Translates to: SVAQLRSIRVHSASLRHFSCCSF*REASVN
Trigger: GTTGACCGAGGCCTCCCTGCAGAAGCTGCAGCAGCT...GAAGTGCCTTAAACTTGCAGAGTGGACCCTAATCGACCTTAACTGTGCTACTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp TCAGTAGCACAGTTAAGGTCGATTAGGGTCCACTCTGCAAGTTTAAGGCACTTCCCTCATCCTCCAGCCTaGGCAACTCCTCATCCCGCA +
Preference number: 4 (lower is better)
Translates to: SVAQLRSIRVHSASLRHFPHPPA*ATPHPA
Trigger: TGCGGGATGAGGAGTTGCGCAGGCTGGAGGATGAGG...GAAGTGCCTTAAACTTGCAGAGTGGACCCTAATCGACCTTAACTGTGCTACTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp TCAGTAGCACAGTTAAGGTCGATTAGGGTCCACTCTGCAAGTTTAAGGCACTTCGGGAGCGCTCGATGTTaGGGACGCACTCGTCGATCT +
Preference number: 4 (lower is better)
Translates to: SVAQLRSIRVHSASLRHFGSARC*GRTRRS
Trigger: AGATCGACGAGTGCGTCCGCAACATCGAGCGCTCCC...GAAGTGCCTTAAACTTGCAGAGTGGACCCTAATCGACCTTAACTGTGCTACTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp CCCTCATTTGCAGGAAATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCATCTTCAAAGGAGGACTaGGCCCCTTCTGAGCTGAAC +
Preference number: 4 (lower is better)
Translates to: PSFAGNQAGEVSAQSVDPSSKED*APSELN
Trigger: GTTCAGCTCAGAAGGGGCGCAGTCCTCCTTTGAAGA...TGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGATTTCCTGCAAATGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp ATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCCAGCCCTGCCAGCAGTaGATAGAATATGTGATAATT +
Preference number: 4 (lower is better)
Translates to: IRLGRLVHNQWIHAPPPSQPCQQ*IEYVII
Trigger: AATTATCACATATTCTATGCACTGCTGGCAGGGCTG...GCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp TCAGTAGCACAGTTAAGGTCGATTAGGGTCCACTCTGCAAGTTTAAGGCACTTCGGATCAGCTGCTGGGTaGGCGTGTCGATTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: SVAQLRSIRVHSASLRHFGSAAG*ACRLEP
Trigger: AGGCTCCAATCGACACGCCCACCCAGCAGCTGATCC...GAAGTGCCTTAAACTTGCAGAGTGGACCCTAATCGACCTTAACTGTGCTACTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp ATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCCGTATCCTTTTCAGGTaGAACTTGAGGTATTTGAGG +
Preference number: 4 (lower is better)
Translates to: IRLGRLVHNQWIHAPPPSRILFR*NLRYLR
Trigger: CCTCAAATACCTCAAGTTCCACCTGAAAAGGATACG...GCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp TCAGTAGCACAGTTAAGGTCGATTAGGGTCCACTCTGCAAGTTTAAGGCACTTCCGTACAGGCCAGCGATaGGCTGGTAGGGGTTCACTG +
Preference number: 4 (lower is better)
Translates to: SVAQLRSIRVHSASLRHFRTGQR*AGRGSL
Trigger: CAGTGAACCCCTACCAGCCCATCGCTGGCCTGTACG...GAAGTGCCTTAAACTTGCAGAGTGGACCCTAATCGACCTTAACTGTGCTACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp GAGTGTGTGAACACATGCATGCGCGGGCAAGCACAGACAGTTGAAACAAAGCAAATCTGTGAGCTGCGTTaGGTCCAGCCCAAGCAAGTC +
Preference number: 4 (lower is better)
Translates to: ECVNTCMRGQAQTVETKQICELR*VQPKQV
Trigger: GACTTGCTTGGGCTGGACCCAACGCAGCTCACAGAT...TTGCTTTGTTTCAACTGTCTGTGCTTGCCCGCGCATGCATGTGTTCACACACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp CCCTCATTTGCAGGAAATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCACATTTCAAGGTGTCCTaGTTGTTGCGGCTGGAGACG +
Preference number: 4 (lower is better)
Translates to: PSFAGNQAGEVSAQSVDPHFKVS*LLRLET
Trigger: CGTCTCCAGCCGCAACAACCAGGACACCTTGAAATG...TGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGATTTCCTGCAAATGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR TCA 90 bp TCAGTAGCACAGTTAAGGTCGATTAGGGTCCACTCTGCAAGTTTAAGGCACTTCGTGGACGAGTGGACCTaGCTCAGCACGCTGAACCAT +
Preference number: 4 (lower is better)
Translates to: SVAQLRSIRVHSASLRHFVDEWT*LSTLNH
Trigger: ATGGTTCAGCGTGCTGAGTCAGGTCCACTCGTCCAC...GAAGTGCCTTAAACTTGCAGAGTGGACCCTAATCGACCTTAACTGTGCTACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR TCA 90 bp CCCTCATTTGCAGGAAATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCACATCATGCATTTCTCTaGTCTCCTGGTCTGTGGACG +
Preference number: 4 (lower is better)
Translates to: PSFAGNQAGEVSAQSVDPHHAFL*SPGLWT
Trigger: CGTCCACAGACCAGGAGATCAGAGAAATGCATGATG...TGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGATTTCCTGCAAATGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR TCA 90 bp GAGTGTGTGAACACATGCATGCGCGGGCAAGCACAGACAGTTGAAACAAAGCAAAACCAGGCCACTCCTTaGTCAGGGCCATATACTTGG +
Preference number: 4 (lower is better)
Translates to: ECVNTCMRGQAQTVETKQNQATP*SGPYTW
Trigger: CCAAGTATATGGCCCTGATCAAGGAGTGGCCTGGTT...TTGCTTTGTTTCAACTGTCTGTGCTTGCCCGCGCATGCATGTGTTCACACACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR TCA 90 bp CCCTCATTTGCAGGAAATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCATACTCTGCTTGTAGGTaGACACCTGCCCATAGTCTG +
Preference number: 4 (lower is better)
Translates to: PSFAGNQAGEVSAQSVDPYSACR*TPAHSL
Trigger: CAGACTATGGGCAGGTGTTCACCTACAAGCAGAGTA...TGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGATTTCCTGCAAATGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR TCA 90 bp GAGTGTGTGAACACATGCATGCGCGGGCAAGCACAGACAGTTGAAACAAAGCAAGGTTCACTGACGCGATaGTGGAGCCGATGTAGGTAT +
Preference number: 4 (lower is better)
Translates to: ECVNTCMRGQAQTVETKQGSLTR*WSRCRY
Trigger: ATACCTACATCGGCTCCATCATCGCGTCAGTGAACC...TTGCTTTGTTTCAACTGTCTGTGCTTGCCCGCGCATGCATGTGTTCACACACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR TCA 90 bp CCCTCATTTGCAGGAAATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCATGGCAGATGTTCAGCTaGACAAACTTCCCGAAGCGA +
Preference number: 4 (lower is better)
Translates to: PSFAGNQAGEVSAQSVDPWQMFS*TNFPKR
Trigger: TCGCTTCGGGAAGTTTGTTCAGCTGAACATCTGCCA...TGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGATTTCCTGCAAATGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp TCAGTAGCACAGTTAAGGTCGATTAGGGTCCACTCTGCAAGTTTAAGGCACTTCTGCTTGAGGGCTTCCTaGTTGGAGCGGAACCACAGG +
Preference number: 4 (lower is better)
Translates to: SVAQLRSIRVHSASLRHFCLRAS*LERNHR
Trigger: CCTGTGGTTCCGCTCCAAGCAGGAAGCCCTCAAGCA...GAAGTGCCTTAAACTTGCAGAGTGGACCCTAATCGACCTTAACTGTGCTACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp CCCTCATTTGCAGGAAATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCAGGAAGCCGCCTTCTTTaGACTCCACATCAAAGAGTG +
Preference number: 4 (lower is better)
Translates to: PSFAGNQAGEVSAQSVDPGSRLL*TPHQRV
Trigger: CACTCTTTGATGTGGAGTGCAAAGAAGGCGGCTTCC...TGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGATTTCCTGCAAATGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp CCCTCATTTGCAGGAAATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCAGTTTTGAAGGGAATCTaGGCCCCTCCAGCAGTGATA +
Preference number: 4 (lower is better)
Translates to: PSFAGNQAGEVSAQSVDPVLKGI*APPAVI
Trigger: TATCACTGCTGGAGGGGCGCAGATTCCCTTCAAAAC...TGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGATTTCCTGCAAATGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp CCCTCATTTGCAGGAAATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCACATCTGTATCAAACCTaGAGTCGAAGTCCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: PSFAGNQAGEVSAQSVDPHLYQT*SRSPPR
Trigger: GCGAGGAGGACTTCGACTCCAGGTTTGATACAGATG...TGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGATTTCCTGCAAATGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp ATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCCATCTTCTGTGTGTTTaGCTTGATGCATCTGACAAA +
Preference number: 4 (lower is better)
Translates to: IRLGRLVHNQWIHAPPPSHLLCV*LDASDK
Trigger: TTTGTCAGATGCATCAAGCCAAACACACAGAAGATG...GCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR TCA 90 bp GAGTGTGTGAACACATGCATGCGCGGGCAAGCACAGACAGTTGAAACAAAGCAAGGAAATAGGGCAGTGTaGCGCAGCTATACACAGAGT +
Preference number: 4 (lower is better)
Translates to: ECVNTCMRGQAQTVETKQGNRAV*RSYTQS
Trigger: ACTCTGTGTATAGCTGCGTCACACTGCCCTATTTCC...TTGCTTTGTTTCAACTGTCTGTGCTTGCCCGCGCATGCATGTGTTCACACACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR TCA 90 bp TCAGTAGCACAGTTAAGGTCGATTAGGGTCCACTCTGCAAGTTTAAGGCACTTCTGCGCCCATACACGGTaGCATTCCAGTAGCCTGTCT +
Preference number: 4 (lower is better)
Translates to: SVAQLRSIRVHSASLRHFCAHTR*HSSSLS
Trigger: AGACAGGCTACTGGAATGTCACCGTGTATGGGCGCA...GAAGTGCCTTAAACTTGCAGAGTGGACCCTAATCGACCTTAACTGTGCTACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp CCCTCATTTGCAGGAAATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCAAGGTCAGCTTCTCTTTaGGCTCGCTCTCTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: PSFAGNQAGEVSAQSVDPRSASL*ARSLSL
Trigger: AAGAGAAAGAGAGCGAGCGCAAAGAGAAGCTGACCT...TGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGATTTCCTGCAAATGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp TGGTTTATAAATACAGTTATCTCTCTGGGCTGTAGACCTGTTAGTAATACAGCATGGTCGGAGTGGCCGTaGTCGCTGGGGTTGGGCGAG +
Preference number: 4 (lower is better)
Translates to: WFINTVISLGCRPVSNTAWSEWP*SLGLGE
Trigger: CTCGCCCAACCCCAGCGAGCACGGCCACTCCGACCA...TGCTGTATTACTAACAGGTCTACAGCCCAGAGAGATAACTGTATTTATAAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp TCAGTAGCACAGTTAAGGTCGATTAGGGTCCACTCTGCAAGTTTAAGGCACTTCAGGGTTATCCAGTGGTaGATCTCCTCTGGGGTGTCC +
Preference number: 4 (lower is better)
Translates to: SVAQLRSIRVHSASLRHFRVIQW*ISSGVS
Trigger: GGACACCCCAGAGGAGATGCACCACTGGATAACCCT...GAAGTGCCTTAAACTTGCAGAGTGGACCCTAATCGACCTTAACTGTGCTACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp TCAGTAGCACAGTTAAGGTCGATTAGGGTCCACTCTGCAAGTTTAAGGCACTTCCGCTGTCTTTTGGCATaGTGTCGGTGTCCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: SVAQLRSIRVHSASLRHFRCLLA*CRCPGS
Trigger: GCTTCCTGGACACCGACAGCATGCCAAAAGACAGCG...GAAGTGCCTTAAACTTGCAGAGTGGACCCTAATCGACCTTAACTGTGCTACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp CCCTCATTTGCAGGAAATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCAGACCACGACGCCTTCTaGACAGGAATTTACAGTACT +
Preference number: 4 (lower is better)
Translates to: PSFAGNQAGEVSAQSVDPDHDAF*TGIYST
Trigger: AGTACTGTAAATTCCTGTGCAGAAGGCGTCGTGGTC...TGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGATTTCCTGCAAATGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp GAGTGTGTGAACACATGCATGCGCGGGCAAGCACAGACAGTTGAAACAAAGCAAGTTGCCATTAAGGAGTaGAGGGAGTCCTTGAACTGC +
Preference number: 4 (lower is better)
Translates to: ECVNTCMRGQAQTVETKQVAIKE*RESLNC
Trigger: GCAGTTCAAGGACTCCCTGCACTCCTTAATGGCAAC...TTGCTTTGTTTCAACTGTCTGTGCTTGCCCGCGCATGCATGTGTTCACACACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp CGACATGGTTATATCTGCAATCTAGCCAGAGTGATAACACAAGTTACCCTTCAACGGCACTGGGGCTGGTaGGCACCACCGTGTAGTTCA +
Preference number: 4 (lower is better)
Translates to: RHGYICNLARVITQVTLQRHWGW*APPCSS
Trigger: TGAACTACACGGTGGTGCCCACCAGCCCCAGTGCCG...TTGAAGGGTAACTTGTGTTATCACTCTGGCTAGATTGCAGATATAACCATGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp TGGTTTATAAATACAGTTATCTCTCTGGGCTGTAGACCTGTTAGTAATACAGCACCGTACTGTCGGCACTaGGGCTGGTGGGCACCACCG +
Preference number: 4 (lower is better)
Translates to: WFINTVISLGCRPVSNTAPYCRH*GWWAPP
Trigger: CGGTGGTGCCCACCAGCCCCAGTGCCGACAGTACGG...TGCTGTATTACTAACAGGTCTACAGCCCAGAGAGATAACTGTATTTATAAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp GAGTGTGTGAACACATGCATGCGCGGGCAAGCACAGACAGTTGAAACAAAGCAAATTTCTCTGATCTCCTaGTCTGTGGACGAGTGGACC +
Preference number: 4 (lower is better)
Translates to: ECVNTCMRGQAQTVETKQISLIS*SVDEWT
Trigger: GGTCCACTCGTCCACAGACCAGGAGATCAGAGAAAT...TTGCTTTGTTTCAACTGTCTGTGCTTGCCCGCGCATGCATGTGTTCACACACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp TCAGTAGCACAGTTAAGGTCGATTAGGGTCCACTCTGCAAGTTTAAGGCACTTCGTGCCCACAGCATTCTaGGGGTTTGCCTGCTCATCA +
Preference number: 4 (lower is better)
Translates to: SVAQLRSIRVHSASLRHFVPTAF*GFACSS
Trigger: TGATGAGCAGGCAAACCCCCAGAATGCTGTGGGCAC...GAAGTGCCTTAAACTTGCAGAGTGGACCCTAATCGACCTTAACTGTGCTACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp TCAGTAGCACAGTTAAGGTCGATTAGGGTCCACTCTGCAAGTTTAAGGCACTTCAGCAGGGTTATCCAGTaGTGCATCTCCTCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: SVAQLRSIRVHSASLRHFSRVIQ*CISSGV
Trigger: CACCCCAGAGGAGATGCACCACTGGATAACCCTGCT...GAAGTGCCTTAAACTTGCAGAGTGGACCCTAATCGACCTTAACTGTGCTACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp CCCTCATTTGCAGGAAATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCATGTCGATTGGAGCCTTaGTGTCAGTCACATTCTGGA +
Preference number: 4 (lower is better)
Translates to: PSFAGNQAGEVSAQSVDPCRLEP*CQSHSG
Trigger: TCCAGAATGTGACTGACACCAAGGCTCCAATCGACA...TGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGATTTCCTGCAAATGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp CGACATGGTTATATCTGCAATCTAGCCAGAGTGATAACACAAGTTACCCTTCAAAACCTCCTCGAGGGGTaGGATGGAGGTGTGCGGGGT +
Preference number: 4 (lower is better)
Translates to: RHGYICNLARVITQVTLQNLLEG*DGGVRG
Trigger: ACCCCGCACACCTCCATCCCACCCCTCGAGGAGGTT...TTGAAGGGTAACTTGTGTTATCACTCTGGCTAGATTGCAGATATAACCATGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp CCCTCATTTGCAGGAAATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCACCATATACTTGGCCATaGCTTGTTCCTGGTTCATCC +
Preference number: 4 (lower is better)
Translates to: PSFAGNQAGEVSAQSVDPPYTWP*LVPGSS
Trigger: GGATGAACCAGGAACAAGCCATGGCCAAGTATATGG...TGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGATTTCCTGCAAATGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp CGACATGGTTATATCTGCAATCTAGCCAGAGTGATAACACAAGTTACCCTTCAAATGATGGAGCCCCCATaGAGCTCGGCCAGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: RHGYICNLARVITQVTLQMMEPP*SSAREA
Trigger: GGCTTCCCTGGCCGAGCTCCATGGGGGCTCCATCAT...TTGAAGGGTAACTTGTGTTATCACTCTGGCTAGATTGCAGATATAACCATGTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp TCAGTAGCACAGTTAAGGTCGATTAGGGTCCACTCTGCAAGTTTAAGGCACTTCCTCGAAGGAAGACCTTaGTCTTCCCCAGCTGCCACT +
Preference number: 4 (lower is better)
Translates to: SVAQLRSIRVHSASLRHFLEGRP*SSPAAT
Trigger: AGTGGCAGCTGGGGAAGACCAAGGTCTTCCTTCGAG...GAAGTGCCTTAAACTTGCAGAGTGGACCCTAATCGACCTTAACTGTGCTACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR TCA 90 bp TCAGTAGCACAGTTAAGGTCGATTAGGGTCCACTCTGCAAGTTTAAGGCACTTCAACCAGGCCACTCCTTaGTCAGGGCCATATACTTGG +
Preference number: 4 (lower is better)
Translates to: SVAQLRSIRVHSASLRHFNQATP*SGPYTW
Trigger: CCAAGTATATGGCCCTGATCAAGGAGTGGCCTGGTT...GAAGTGCCTTAAACTTGCAGAGTGGACCCTAATCGACCTTAACTGTGCTACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp CGACATGGTTATATCTGCAATCTAGCCAGAGTGATAACACAAGTTACCCTTCAAGCTGCCTGTAAACCCTaGGTGCCAGCTGTCCTCGCA +
Preference number: 4 (lower is better)
Translates to: RHGYICNLARVITQVTLQAACKP*VPAVLA
Trigger: TGCGAGGACAGCTGGCACGCAGGGTTTACAGGCAGC...TTGAAGGGTAACTTGTGTTATCACTCTGGCTAGATTGCAGATATAACCATGTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp TCAGTAGCACAGTTAAGGTCGATTAGGGTCCACTCTGCAAGTTTAAGGCACTTCCGCTCCTTCATGCGCTaGAGATCCTCGATTTCCTTC +
Preference number: 4 (lower is better)
Translates to: SVAQLRSIRVHSASLRHFRSFMR*RSSISF
Trigger: GAAGGAAATCGAGGATCTGCAGCGCATGAAGGAGCG...GAAGTGCCTTAAACTTGCAGAGTGGACCCTAATCGACCTTAACTGTGCTACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp GAGTGTGTGAACACATGCATGCGCGGGCAAGCACAGACAGTTGAAACAAAGCAAAGCATTCTGGGGGTTTaGCTGCTCATCATGCATTTC +
Preference number: 4 (lower is better)
Translates to: ECVNTCMRGQAQTVETKQSILGV*LLIMHF
Trigger: GAAATGCATGATGAGCAGGCAAACCCCCAGAATGCT...TTGCTTTGTTTCAACTGTCTGTGCTTGCCCGCGCATGCATGTGTTCACACACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp GAGTGTGTGAACACATGCATGCGCGGGCAAGCACAGACAGTTGAAACAAAGCAATCACAGAGCGTGTGGTaGTATAGCGCTTCTTCACAA +
Preference number: 4 (lower is better)
Translates to: ECVNTCMRGQAQTVETKQSQSVW*YSASSQ
Trigger: TTGTGAAGAAGCGCTATAGCACCACACGCTCTGTGA...TTGCTTTGTTTCAACTGTCTGTGCTTGCCCGCGCATGCATGTGTTCACACACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp TGGTTTATAAATACAGTTATCTCTCTGGGCTGTAGACCTGTTAGTAATACAGCAGACTCCAAGAACTCCTaGGCGGCGCGGCAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: WFINTVISLGCRPVSNTADSKNS*AARQAS
Trigger: TGAGGCCTGCCGCGCCGCCCAGGAGTTCTTGGAGTC...TGCTGTATTACTAACAGGTCTACAGCCCAGAGAGATAACTGTATTTATAAACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp TCAGTAGCACAGTTAAGGTCGATTAGGGTCCACTCTGCAAGTTTAAGGCACTTCGTGTCAGTCACATTCTaGATGGCGCTGGACCACCTA +
Preference number: 4 (lower is better)
Translates to: SVAQLRSIRVHSASLRHFVSVTF*MALDHL
Trigger: TAGGTGGTCCAGCGCCATCCAGAATGTGACTGACAC...GAAGTGCCTTAAACTTGCAGAGTGGACCCTAATCGACCTTAACTGTGCTACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp CGACATGGTTATATCTGCAATCTAGCCAGAGTGATAACACAAGTTACCCTTCAAGGATCAGCTGCTGGGTaGGCGTGTCGATTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: RHGYICNLARVITQVTLQGSAAG*ACRLEP
Trigger: AGGCTCCAATCGACACGCCCACCCAGCAGCTGATCC...TTGAAGGGTAACTTGTGTTATCACTCTGGCTAGATTGCAGATATAACCATGTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp TCAGTAGCACAGTTAAGGTCGATTAGGGTCCACTCTGCAAGTTTAAGGCACTTCCTCCATCTCGGTTCCTaGGAACTGTTCCCGTATCCT +
Preference number: 4 (lower is better)
Translates to: SVAQLRSIRVHSASLRHFLHLGS*ELFPYP
Trigger: AGGATACGGGAACAGTTCCCAGGAACCGAGATGGAG...GAAGTGCCTTAAACTTGCAGAGTGGACCCTAATCGACCTTAACTGTGCTACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp CCCTCATTTGCAGGAAATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCAACAAAGTGCTGTCTGTaGCTTGAGGAAAATGGCTCT +
Preference number: 4 (lower is better)
Translates to: PSFAGNQAGEVSAQSVDPTKCCL*LEENGS
Trigger: AGAGCCATTTTCCTCAAGCCACAGACAGCACTTTGT...TGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGATTTCCTGCAAATGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR TCA 90 bp GAGTGTGTGAACACATGCATGCGCGGGCAAGCACAGACAGTTGAAACAAAGCAATGTCTTTCAGCAGGTTaGGATTTATGTCCCCATAGG +
Preference number: 4 (lower is better)
Translates to: ECVNTCMRGQAQTVETKQCLSAG*DLCPHR
Trigger: CCTATGGGGACATAAATCTCAACCTGCTGAAAGACA...TTGCTTTGTTTCAACTGTCTGTGCTTGCCCGCGCATGCATGTGTTCACACACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR TCA 90 bp TCAGTAGCACAGTTAAGGTCGATTAGGGTCCACTCTGCAAGTTTAAGGCACTTCACAATTCTTCCTCCCTaGATGTTTCCCTGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: SVAQLRSIRVHSASLRHFTILPP*MFPCWQ
Trigger: CTGCCAGCAGGGAAACATTCAGGGAGGAAGAATTGT...GAAGTGCCTTAAACTTGCAGAGTGGACCCTAATCGACCTTAACTGTGCTACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp TCAGTAGCACAGTTAAGGTCGATTAGGGTCCACTCTGCAAGTTTAAGGCACTTCTGCTTGTTCTCCCTTTaGTTTTCCAGCTCCCTGGTC +
Preference number: 4 (lower is better)
Translates to: SVAQLRSIRVHSASLRHFCLFSL*FSSSLV
Trigger: GACCAGGGAGCTGGAAAAGCAAAGGGAGAACAAGCA...GAAGTGCCTTAAACTTGCAGAGTGGACCCTAATCGACCTTAACTGTGCTACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp CGACATGGTTATATCTGCAATCTAGCCAGAGTGATAACACAAGTTACCCTTCAATGCTTGAGGGCTTCCTaGTTGGAGCGGAACCACAGG +
Preference number: 4 (lower is better)
Translates to: RHGYICNLARVITQVTLQCLRAS*LERNHR
Trigger: CCTGTGGTTCCGCTCCAAGCAGGAAGCCCTCAAGCA...TTGAAGGGTAACTTGTGTTATCACTCTGGCTAGATTGCAGATATAACCATGTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp TCAGTAGCACAGTTAAGGTCGATTAGGGTCCACTCTGCAAGTTTAAGGCACTTCATATCTTGGATCAGCTaGTGGGTGGGCGTGTCGATT +
Preference number: 4 (lower is better)
Translates to: SVAQLRSIRVHSASLRHFISWIS*WVGVSI
Trigger: AATCGACACGCCCACCCAGCAGCTGATCCAAGATAT...GAAGTGCCTTAAACTTGCAGAGTGGACCCTAATCGACCTTAACTGTGCTACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp CGACATGGTTATATCTGCAATCTAGCCAGAGTGATAACACAAGTTACCCTTCAACACATGTCCAGCATCTaGTCCTCCTCCGCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: RHGYICNLARVITQVTLQHMSSI*SSSAFC
Trigger: GCAGAAGGCGGAGGAGGAGCAGATGCTGGACATGTG...TTGAAGGGTAACTTGTGTTATCACTCTGGCTAGATTGCAGATATAACCATGTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp TGGTTTATAAATACAGTTATCTCTCTGGGCTGTAGACCTGTTAGTAATACAGCATGGAGCTGCCCTGGCTaGTCACAGAGCGTGTGGTGC +
Preference number: 4 (lower is better)
Translates to: WFINTVISLGCRPVSNTAWSCPG*SQSVWC
Trigger: GCACCACACGCTCTGTGAGCAGCCAGGGCAGCTCCA...TGCTGTATTACTAACAGGTCTACAGCCCAGAGAGATAACTGTATTTATAAACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp CCCTCATTTGCAGGAAATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCATGTTCTTTTCCAAGATaGCTCGGACATCATACTGCA +
Preference number: 4 (lower is better)
Translates to: PSFAGNQAGEVSAQSVDPCSFPR*LGHHTA
Trigger: TGCAGTATGATGTCCGAGGCATCTTGGAAAAGAACA...TGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGATTTCCTGCAAATGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp TCAGTAGCACAGTTAAGGTCGATTAGGGTCCACTCTGCAAGTTTAAGGCACTTCGCTGAAGTTGAAGTTTaGCTTCTCTCCGCTGGCACT +
Preference number: 4 (lower is better)
Translates to: SVAQLRSIRVHSASLRHFAEVEV*LLSAGT
Trigger: AGTGCCAGCGGAGAGAAGCCAAACTTCAACTTCAGC...GAAGTGCCTTAAACTTGCAGAGTGGACCCTAATCGACCTTAACTGTGCTACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp TGGTTTATAAATACAGTTATCTCTCTGGGCTGTAGACCTGTTAGTAATACAGCAATGCCACTCGTTCGCTaGTCGGAGTGGCCGTGCTCG +
Preference number: 4 (lower is better)
Translates to: WFINTVISLGCRPVSNTAMPLVR*SEWPCS
Trigger: CGAGCACGGCCACTCCGACCAGCGAACGAGTGGCAT...TGCTGTATTACTAACAGGTCTACAGCCCAGAGAGATAACTGTATTTATAAACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp CGACATGGTTATATCTGCAATCTAGCCAGAGTGATAACACAAGTTACCCTTCAAGTGGTGCATCTCCTCTaGGGTGTCCGCGTTACAGTG +
Preference number: 4 (lower is better)
Translates to: RHGYICNLARVITQVTLQVVHLL*GVRVTV
Trigger: CACTGTAACGCGGACACCCCAGAGGAGATGCACCAC...TTGAAGGGTAACTTGTGTTATCACTCTGGCTAGATTGCAGATATAACCATGTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp CGACATGGTTATATCTGCAATCTAGCCAGAGTGATAACACAAGTTACCCTTCAAGGTGGGCGTGTCGATTaGAGCCTTGGTGTCAGTCAC +
Preference number: 4 (lower is better)
Translates to: RHGYICNLARVITQVTLQGGRVD*SLGVSH
Trigger: GTGACTGACACCAAGGCTCCAATCGACACGCCCACC...TTGAAGGGTAACTTGTGTTATCACTCTGGCTAGATTGCAGATATAACCATGTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp TGGTTTATAAATACAGTTATCTCTCTGGGCTGTAGACCTGTTAGTAATACAGCATCAGGGGCTGGGTGGTaGCCATGGATGACGGCTTCG +
Preference number: 4 (lower is better)
Translates to: WFINTVISLGCRPVSNTASGAGW*PWMTAS
Trigger: CGAAGCCGTCATCCATGGCCACCACCCAGCCCCTGA...TGCTGTATTACTAACAGGTCTACAGCCCAGAGAGATAACTGTATTTATAAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp GAGTGTGTGAACACATGCATGCGCGGGCAAGCACAGACAGTTGAAACAAAGCAAATAGCTGTCACCTTCTaGTTGGTGATTGTACTCTGC +
Preference number: 4 (lower is better)
Translates to: ECVNTCMRGQAQTVETKQIAVTF*LVIVLC
Trigger: GCAGAGTACAATCACCAACCAGAAGGTGACAGCTAT...TTGCTTTGTTTCAACTGTCTGTGCTTGCCCGCGCATGCATGTGTTCACACACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp TCAGTAGCACAGTTAAGGTCGATTAGGGTCCACTCTGCAAGTTTAAGGCACTTCAGCGATAGCATTCGTTaGCAATGGCGAAGATGTGCG +
Preference number: 4 (lower is better)
Translates to: SVAQLRSIRVHSASLRHFSDSIR*QWRRCA
Trigger: CGCACATCTTCGCCATTGCCAACGAATGCTATCGCT...GAAGTGCCTTAAACTTGCAGAGTGGACCCTAATCGACCTTAACTGTGCTACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp TCAGTAGCACAGTTAAGGTCGATTAGGGTCCACTCTGCAAGTTTAAGGCACTTCAGGATCATGGATCTCTaGGTCAGTGCATCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: SVAQLRSIRVHSASLRHFRIMDL*VSASVS
Trigger: GCTCACAGATGCACTGACCCAGAGATCCATGATCCT...GAAGTGCCTTAAACTTGCAGAGTGGACCCTAATCGACCTTAACTGTGCTACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR TCA 90 bp TCAGTAGCACAGTTAAGGTCGATTAGGGTCCACTCTGCAAGTTTAAGGCACTTCAGTAGCCTGTCTCTTTaGATATCTTCTCGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: SVAQLRSIRVHSASLRHFSSLSL*ISSRLG
Trigger: CCCCAGACGAGAAGATATTCAAAGAGACAGGCTACT...GAAGTGCCTTAAACTTGCAGAGTGGACCCTAATCGACCTTAACTGTGCTACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR TCA 90 bp CGACATGGTTATATCTGCAATCTAGCCAGAGTGATAACACAAGTTACCCTTCAATGCGCCCATACACGGTaGCATTCCAGTAGCCTGTCT +
Preference number: 4 (lower is better)
Translates to: RHGYICNLARVITQVTLQCAHTR*HSSSLS
Trigger: AGACAGGCTACTGGAATGTCACCGTGTATGGGCGCA...TTGAAGGGTAACTTGTGTTATCACTCTGGCTAGATTGCAGATATAACCATGTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR TCA 90 bp TCAGTAGCACAGTTAAGGTCGATTAGGGTCCACTCTGCAAGTTTAAGGCACTTCAAGGTTTTGGTCGACTaGCTAATGCGAGCTCTGAGT +
Preference number: 4 (lower is better)
Translates to: SVAQLRSIRVHSASLRHFKVLVD*LMRALS
Trigger: ACTCAGAGCTCGCATTAGTCAGTCGACCAAAACCTT...GAAGTGCCTTAAACTTGCAGAGTGGACCCTAATCGACCTTAACTGTGCTACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp TGGTTTATAAATACAGTTATCTCTCTGGGCTGTAGACCTGTTAGTAATACAGCAGTCAACGACAGCTCCTaGCGCTCCTTCATGCGCTGC +
Preference number: 4 (lower is better)
Translates to: WFINTVISLGCRPVSNTAVNDSS*RSFMRC
Trigger: GCAGCGCATGAAGGAGCGGCAGGAGCTGTCGTTGAC...TGCTGTATTACTAACAGGTCTACAGCCCAGAGAGATAACTGTATTTATAAACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp TGGTTTATAAATACAGTTATCTCTCTGGGCTGTAGACCTGTTAGTAATACAGCACCTCATCCTCCAGCCTaGGCAACTCCTCATCCCGCA +
Preference number: 4 (lower is better)
Translates to: WFINTVISLGCRPVSNTAPHPPA*ATPHPA
Trigger: TGCGGGATGAGGAGTTGCGCAGGCTGGAGGATGAGG...TGCTGTATTACTAACAGGTCTACAGCCCAGAGAGATAACTGTATTTATAAACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp TGGTTTATAAATACAGTTATCTCTCTGGGCTGTAGACCTGTTAGTAATACAGCACCACTCGAGGAGTTGTaGAGGCTAGCGGAGTCCTGC +
Preference number: 4 (lower is better)
Translates to: WFINTVISLGCRPVSNTAPLEEL*RLAESC
Trigger: GCAGGACTCCGCTAGCCTGCACAACTCCTCGAGTGG...TGCTGTATTACTAACAGGTCTACAGCCCAGAGAGATAACTGTATTTATAAACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp TGGTTTATAAATACAGTTATCTCTCTGGGCTGTAGACCTGTTAGTAATACAGCAAAAGGTTGCCCACGCTaGCGGGATGGGGCACCTTGT +
Preference number: 4 (lower is better)
Translates to: WFINTVISLGCRPVSNTAKGCPR*RDGAPC
Trigger: ACAAGGTGCCCCATCCCGGCAGCGTGGGCAACCTTT...TGCTGTATTACTAACAGGTCTACAGCCCAGAGAGATAACTGTATTTATAAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp CGACATGGTTATATCTGCAATCTAGCCAGAGTGATAACACAAGTTACCCTTCAAAGGCAAACATGTTCCTaGTGTCCTCCATGGCGAGCC +
Preference number: 4 (lower is better)
Translates to: RHGYICNLARVITQVTLQRQTCS*CPPWRA
Trigger: GGCTCGCCATGGAGGACAGCAGGAACATGTTTGCCT...TTGAAGGGTAACTTGTGTTATCACTCTGGCTAGATTGCAGATATAACCATGTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp TCAGTAGCACAGTTAAGGTCGATTAGGGTCCACTCTGCAAGTTTAAGGCACTTCAGACTTCTAACGGTTTaGCCTCTCCACGCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: SVAQLRSIRVHSASLRHFRLLTV*PLHACR
Trigger: TCTACAAGCGTGGAGAGGGCAAACCGTTAGAAGTCT...GAAGTGCCTTAAACTTGCAGAGTGGACCCTAATCGACCTTAACTGTGCTACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp CCCTCATTTGCAGGAAATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCAACACCAATCCCTCCCTaGTATATTCTAGTTGTTCTA +
Preference number: 4 (lower is better)
Translates to: PSFAGNQAGEVSAQSVDPTPIPP*YILVVL
Trigger: TAGAACAACTAGAATATAGCAGGGAGGGATTGGTGT...TGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGATTTCCTGCAAATGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp CGACATGGTTATATCTGCAATCTAGCCAGAGTGATAACACAAGTTACCCTTCAATTGGTCTTCCCCAGCTaGCACTCGCTGTTAGAAGCG +
Preference number: 4 (lower is better)
Translates to: RHGYICNLARVITQVTLQLVFPS*HSLLEA
Trigger: CGCTTCTAACAGCGAGTGGCAGCTGGGGAAGACCAA...TTGAAGGGTAACTTGTGTTATCACTCTGGCTAGATTGCAGATATAACCATGTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp CGACATGGTTATATCTGCAATCTAGCCAGAGTGATAACACAAGTTACCCTTCAAAAGTCCGCTTCCCTCTaGCTCTTCTGCAAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: RHGYICNLARVITQVTLQKSASL*LFCKAS
Trigger: GGAAGCCTTGCAGAAGAGCCAGAGGGAAGCGGACTT...TTGAAGGGTAACTTGTGTTATCACTCTGGCTAGATTGCAGATATAACCATGTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp CGACATGGTTATATCTGCAATCTAGCCAGAGTGATAACACAAGTTACCCTTCAAGGATGGGGTCGGACATaGACTCCAGTTGTTGGAGAG +
Preference number: 4 (lower is better)
Translates to: RHGYICNLARVITQVTLQGWGRT*TPVVGE
Trigger: CTCTCCAACAACTGGAGTCCATGTCCGACCCCATCC...TTGAAGGGTAACTTGTGTTATCACTCTGGCTAGATTGCAGATATAACCATGTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp CGACATGGTTATATCTGCAATCTAGCCAGAGTGATAACACAAGTTACCCTTCAATCCCCGGCTGTGGTGTaGGAGTTGATGGTGATCTTG +
Preference number: 4 (lower is better)
Translates to: RHGYICNLARVITQVTLQSPAVV*ELMVIL
Trigger: CAAGATCACCATCAACTCCCACACCACAGCCGGGGA...TTGAAGGGTAACTTGTGTTATCACTCTGGCTAGATTGCAGATATAACCATGTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp TGGTTTATAAATACAGTTATCTCTCTGGGCTGTAGACCTGTTAGTAATACAGCACCTCGAGGGGTGGGATaGAGGTGTGCGGGGTATAGT +
Preference number: 4 (lower is better)
Translates to: WFINTVISLGCRPVSNTAPRGVG*RCAGYS
Trigger: ACTATACCCCGCACACCTCCATCCCACCCCTCGAGG...TGCTGTATTACTAACAGGTCTACAGCCCAGAGAGATAACTGTATTTATAAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR TCA 90 bp TCAGTAGCACAGTTAAGGTCGATTAGGGTCCACTCTGCAAGTTTAAGGCACTTCTGTCTTTCAGCAGGTTaGGATTTATGTCCCCATAGG +
Preference number: 4 (lower is better)
Translates to: SVAQLRSIRVHSASLRHFCLSAG*DLCPHR
Trigger: CCTATGGGGACATAAATCTCAACCTGCTGAAAGACA...GAAGTGCCTTAAACTTGCAGAGTGGACCCTAATCGACCTTAACTGTGCTACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR TCA 90 bp CGACATGGTTATATCTGCAATCTAGCCAGAGTGATAACACAAGTTACCCTTCAAAGTAGCGCAGCTGGTTaGGCACTACCACCTGATCAA +
Preference number: 4 (lower is better)
Translates to: RHGYICNLARVITQVTLQSSAAG*ALPPDQ
Trigger: TTGATCAGGTGGTAGTGCTCAACCAGCTGCGCTACT...TTGAAGGGTAACTTGTGTTATCACTCTGGCTAGATTGCAGATATAACCATGTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp TGGTTTATAAATACAGTTATCTCTCTGGGCTGTAGACCTGTTAGTAATACAGCACGTTGTTCTGCGGCATaGAGTAGGTGGACTCCCCAC +
Preference number: 4 (lower is better)
Translates to: WFINTVISLGCRPVSNTARCSAA*SRWTPH
Trigger: GTGGGGAGTCCACCTACTGCATGCCGCAGAACAACG...TGCTGTATTACTAACAGGTCTACAGCCCAGAGAGATAACTGTATTTATAAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp CGACATGGTTATATCTGCAATCTAGCCAGAGTGATAACACAAGTTACCCTTCAATCCCTGGTCCAGCCCTaGCAGCAGTGCATAGAATAT +
Preference number: 4 (lower is better)
Translates to: RHGYICNLARVITQVTLQSLVQP*QQCIEY
Trigger: ATATTCTATGCACTGCTGGCAGGGCTGGACCAGGGA...TTGAAGGGTAACTTGTGTTATCACTCTGGCTAGATTGCAGATATAACCATGTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR TCA 90 bp CGACATGGTTATATCTGCAATCTAGCCAGAGTGATAACACAAGTTACCCTTCAACAGAGCGTTCTTCTCTaGGCTCTTGTAGTAGTCCAG +
Preference number: 4 (lower is better)
Translates to: RHGYICNLARVITQVTLQQSVLL*ALVVVQ
Trigger: CTGGACTACTACAAGAGCTCAGAGAAGAACGCTCTG...TTGAAGGGTAACTTGTGTTATCACTCTGGCTAGATTGCAGATATAACCATGTCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp TGGTTTATAAATACAGTTATCTCTCTGGGCTGTAGACCTGTTAGTAATACAGCACCTGCCGCTCCTTCATaGGCTGCAGATCCTCGATTT +
Preference number: 4 (lower is better)
Translates to: WFINTVISLGCRPVSNTAPAAPS*AADPRF
Trigger: AAATCGAGGATCTGCAGCGCATGAAGGAGCGGCAGG...TGCTGTATTACTAACAGGTCTACAGCCCAGAGAGATAACTGTATTTATAAACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp TGGTTTATAAATACAGTTATCTCTCTGGGCTGTAGACCTGTTAGTAATACAGCATCCCCCTTGGATCTCTaGAGCAGGGTTATCCAGTGG +
Preference number: 4 (lower is better)
Translates to: WFINTVISLGCRPVSNTASPLDL*SRVIQW
Trigger: CCACTGGATAACCCTGCTGCAGAGATCCAAGGGGGA...TGCTGTATTACTAACAGGTCTACAGCCCAGAGAGATAACTGTATTTATAAACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp CGACATGGTTATATCTGCAATCTAGCCAGAGTGATAACACAAGTTACCCTTCAAATATCTTGGATCAGCTaGTGGGTGGGCGTGTCGATT +
Preference number: 4 (lower is better)
Translates to: RHGYICNLARVITQVTLQISWIS*WVGVSI
Trigger: AATCGACACGCCCACCCAGCAGCTGATCCAAGATAT...TTGAAGGGTAACTTGTGTTATCACTCTGGCTAGATTGCAGATATAACCATGTCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp TCAGTAGCACAGTTAAGGTCGATTAGGGTCCACTCTGCAAGTTTAAGGCACTTCTGTAATTCTTCTGTATaGTCACCACACCACAGAGGA +
Preference number: 4 (lower is better)
Translates to: SVAQLRSIRVHSASLRHFCNSSV*SPHHRG
Trigger: TCCTCTGTGGTGTGGTGACCATACAGAAGAATTACA...GAAGTGCCTTAAACTTGCAGAGTGGACCCTAATCGACCTTAACTGTGCTACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp CGACATGGTTATATCTGCAATCTAGCCAGAGTGATAACACAAGTTACCCTTCAAGCTTCTGGAACACGATaGCTGCCTTTTTCAGGTGCA +
Preference number: 4 (lower is better)
Translates to: RHGYICNLARVITQVTLQASGTR*LPFSGA
Trigger: TGCACCTGAAAAAGGCAGCCATCGTGTTCCAGAAGC...TTGAAGGGTAACTTGTGTTATCACTCTGGCTAGATTGCAGATATAACCATGTCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp CGACATGGTTATATCTGCAATCTAGCCAGAGTGATAACACAAGTTACCCTTCAACATCTGTATCAAACCTaGAGTCGAAGTCCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: RHGYICNLARVITQVTLQHLYQT*SRSPPR
Trigger: GCGAGGAGGACTTCGACTCCAGGTTTGATACAGATG...TTGAAGGGTAACTTGTGTTATCACTCTGGCTAGATTGCAGATATAACCATGTCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp CGACATGGTTATATCTGCAATCTAGCCAGAGTGATAACACAAGTTACCCTTCAAATTTCTCTGATCTCCTaGTCTGTGGACGAGTGGACC +
Preference number: 4 (lower is better)
Translates to: RHGYICNLARVITQVTLQISLIS*SVDEWT
Trigger: GGTCCACTCGTCCACAGACCAGGAGATCAGAGAAAT...TTGAAGGGTAACTTGTGTTATCACTCTGGCTAGATTGCAGATATAACCATGTCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp TGGTTTATAAATACAGTTATCTCTCTGGGCTGTAGACCTGTTAGTAATACAGCAGTGCCCACAGCATTCTaGGGGTTTGCCTGCTCATCA +
Preference number: 4 (lower is better)
Translates to: WFINTVISLGCRPVSNTAVPTAF*GFACSS
Trigger: TGATGAGCAGGCAAACCCCCAGAATGCTGTGGGCAC...TGCTGTATTACTAACAGGTCTACAGCCCAGAGAGATAACTGTATTTATAAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp CGACATGGTTATATCTGCAATCTAGCCAGAGTGATAACACAAGTTACCCTTCAACATGGCAATACACTGTaGACGTCATTTCCTGCCGGT +
Preference number: 4 (lower is better)
Translates to: RHGYICNLARVITQVTLQHGNTL*TSFPAG
Trigger: ACCGGCAGGAAATGACGTCCACAGTGTATTGCCATG...TTGAAGGGTAACTTGTGTTATCACTCTGGCTAGATTGCAGATATAACCATGTCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp TCAGTAGCACAGTTAAGGTCGATTAGGGTCCACTCTGCAAGTTTAAGGCACTTCAGGATGTGCTCATACTaGAAGACTTCTAACGGTTTG +
Preference number: 4 (lower is better)
Translates to: SVAQLRSIRVHSASLRHFRMCSY*KTSNGL
Trigger: CAAACCGTTAGAAGTCTTCCAGTATGAGCACATCCT...GAAGTGCCTTAAACTTGCAGAGTGGACCCTAATCGACCTTAACTGTGCTACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR TCA 90 bp CGACATGGTTATATCTGCAATCTAGCCAGAGTGATAACACAAGTTACCCTTCAAAGTAGCCTGTCTCTTTaGATATCTTCTCGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: RHGYICNLARVITQVTLQSSLSL*ISSRLG
Trigger: CCCCAGACGAGAAGATATTCAAAGAGACAGGCTACT...TTGAAGGGTAACTTGTGTTATCACTCTGGCTAGATTGCAGATATAACCATGTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR TCA 90 bp CGACATGGTTATATCTGCAATCTAGCCAGAGTGATAACACAAGTTACCCTTCAAAAGGTTTTGGTCGACTaGCTAATGCGAGCTCTGAGT +
Preference number: 4 (lower is better)
Translates to: RHGYICNLARVITQVTLQKVLVD*LMRALS
Trigger: ACTCAGAGCTCGCATTAGTCAGTCGACCAAAACCTT...TTGAAGGGTAACTTGTGTTATCACTCTGGCTAGATTGCAGATATAACCATGTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR TCA 90 bp CGACATGGTTATATCTGCAATCTAGCCAGAGTGATAACACAAGTTACCCTTCAATCACCTTCTGGTTGGTaGTTGTACTCTGCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: RHGYICNLARVITQVTLQSPSGW*LYSACR
Trigger: CCTACAAGCAGAGTACAATCACCAACCAGAAGGTGA...TTGAAGGGTAACTTGTGTTATCACTCTGGCTAGATTGCAGATATAACCATGTCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR TCA 90 bp TGGTTTATAAATACAGTTATCTCTCTGGGCTGTAGACCTGTTAGTAATACAGCAAGGATTCCTGGTCGCTaGTCGTCTTGTCTTCCGTAC +
Preference number: 4 (lower is better)
Translates to: WFINTVISLGCRPVSNTARIPGR*SSCLPY
Trigger: GTACGGAAGACAAGACGATCAGCGACCAGGAATCCT...TGCTGTATTACTAACAGGTCTACAGCCCAGAGAGATAACTGTATTTATAAACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp TGGTTTATAAATACAGTTATCTCTCTGGGCTGTAGACCTGTTAGTAATACAGCATCCCTCTGGCTCTTCTaGAAGGCTTCCAGTTCTTGC +
Preference number: 4 (lower is better)
Translates to: WFINTVISLGCRPVSNTASLWLF*KASSSC
Trigger: GCAAGAACTGGAAGCCTTGCAGAAGAGCCAGAGGGA...TGCTGTATTACTAACAGGTCTACAGCCCAGAGAGATAACTGTATTTATAAACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp CGACATGGTTATATCTGCAATCTAGCCAGAGTGATAACACAAGTTACCCTTCAATTCTGGGGGTTTGCCTaGTCATCATGCATTTCTCTG +
Preference number: 4 (lower is better)
Translates to: RHGYICNLARVITQVTLQFWGFA*SSCISL
Trigger: CAGAGAAATGCATGATGAGCAGGCAAACCCCCAGAA...TTGAAGGGTAACTTGTGTTATCACTCTGGCTAGATTGCAGATATAACCATGTCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp CGACATGGTTATATCTGCAATCTAGCCAGAGTGATAACACAAGTTACCCTTCAATCCTGGTTCATCCCCTaGAGTTTCTTCCACTTGTCA +
Preference number: 4 (lower is better)
Translates to: RHGYICNLARVITQVTLQSWFIP*SFFHLS
Trigger: TGACAAGTGGAAGAAACTGCAGGGGATGAACCAGGA...TTGAAGGGTAACTTGTGTTATCACTCTGGCTAGATTGCAGATATAACCATGTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp CGACATGGTTATATCTGCAATCTAGCCAGAGTGATAACACAAGTTACCCTTCAACTTCGCATTGCCAAATaGTTCCATGATTGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: RHGYICNLARVITQVTLQLRIAK*FHDWAA
Trigger: AGCAGCCCAATCATGGAAGCATTTGGCAATGCGAAG...TTGAAGGGTAACTTGTGTTATCACTCTGGCTAGATTGCAGATATAACCATGTCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp TGGTTTATAAATACAGTTATCTCTCTGGGCTGTAGACCTGTTAGTAATACAGCAGGCTTCCATAGGAGTTaGAGAAAGTCACGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: WFINTVISLGCRPVSNTAGFHRS*RKSRCC
Trigger: GCAGCAGCGTGACTTTCTCCAACTCCTATGGAAGCC...TGCTGTATTACTAACAGGTCTACAGCCCAGAGAGATAACTGTATTTATAAACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp TGGTTTATAAATACAGTTATCTCTCTGGGCTGTAGACCTGTTAGTAATACAGCATACATCAGCTTCGACTaGCGAAGGACAAACCAGCGC +
Preference number: 4 (lower is better)
Translates to: WFINTVISLGCRPVSNTAYISFD*RRTNQR
Trigger: GCGCTGGTTTGTCCTTCGCCAGTCGAAGCTGATGTA...TGCTGTATTACTAACAGGTCTACAGCCCAGAGAGATAACTGTATTTATAAACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp TGGTTTATAAATACAGTTATCTCTCTGGGCTGTAGACCTGTTAGTAATACAGCAGAATATCTTCTCGTCTaGGGGCACAACGGAGCACAG +
Preference number: 4 (lower is better)
Translates to: WFINTVISLGCRPVSNTAEYLLV*GHNGAQ
Trigger: CTGTGCTCCGTTGTGCCCCCAGACGAGAAGATATTC...TGCTGTATTACTAACAGGTCTACAGCCCAGAGAGATAACTGTATTTATAAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp CGACATGGTTATATCTGCAATCTAGCCAGAGTGATAACACAAGTTACCCTTCAAGTCATTTCCTGCCGGTaGATCAGAGCTTCGATTTCA +
Preference number: 4 (lower is better)
Translates to: RHGYICNLARVITQVTLQVISCR*IRASIS
Trigger: TGAAATCGAAGCTCTGATCCACCGGCAGGAAATGAC...TTGAAGGGTAACTTGTGTTATCACTCTGGCTAGATTGCAGATATAACCATGTCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR TCA 90 bp TGGTTTATAAATACAGTTATCTCTCTGGGCTGTAGACCTGTTAGTAATACAGCACAGAGCGTTCTTCTCTaGGCTCTTGTAGTAGTCCAG +
Preference number: 4 (lower is better)
Translates to: WFINTVISLGCRPVSNTAQSVLL*ALVVVQ
Trigger: CTGGACTACTACAAGAGCTCAGAGAAGAACGCTCTG...TGCTGTATTACTAACAGGTCTACAGCCCAGAGAGATAACTGTATTTATAAACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp CGACATGGTTATATCTGCAATCTAGCCAGAGTGATAACACAAGTTACCCTTCAATTTGCCTGCTCATCATaGATTTCTCTGATCTCCTGG +
Preference number: 4 (lower is better)
Translates to: RHGYICNLARVITQVTLQFACSS*ISLISW
Trigger: CCAGGAGATCAGAGAAATGCATGATGAGCAGGCAAA...TTGAAGGGTAACTTGTGTTATCACTCTGGCTAGATTGCAGATATAACCATGTCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp CGACATGGTTATATCTGCAATCTAGCCAGAGTGATAACACAAGTTACCCTTCAAACTTCCCGAAGCGACTaGAGTTGTTGTTGTATACTG +
Preference number: 4 (lower is better)
Translates to: RHGYICNLARVITQVTLQTSRSD*SCCCIL
Trigger: CAGTATACAACAACAACTCCAGTCGCTTCGGGAAGT...TTGAAGGGTAACTTGTGTTATCACTCTGGCTAGATTGCAGATATAACCATGTCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR TCA 90 bp TGGTTTATAAATACAGTTATCTCTCTGGGCTGTAGACCTGTTAGTAATACAGCAGTCTGTTTGATGAGCTaGCAATACAGTTCATCCCGC +
Preference number: 4 (lower is better)
Translates to: WFINTVISLGCRPVSNTAVCLMS*QYSSSR
Trigger: GCGGGATGAACTGTATTGTCAGCTCATCAAACAGAC...TGCTGTATTACTAACAGGTCTACAGCCCAGAGAGATAACTGTATTTATAAACCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp TGGTTTATAAATACAGTTATCTCTCTGGGCTGTAGACCTGTTAGTAATACAGCAAGCATTCTGGGGGTTTaGCTGCTCATCATGCATTTC +
Preference number: 4 (lower is better)
Translates to: WFINTVISLGCRPVSNTASILGV*LLIMHF
Trigger: GAAATGCATGATGAGCAGGCAAACCCCCAGAATGCT...TGCTGTATTACTAACAGGTCTACAGCCCAGAGAGATAACTGTATTTATAAACCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR GCA 90 bp TGGTTTATAAATACAGTTATCTCTCTGGGCTGTAGACCTGTTAGTAATACAGCACTGGAACACGATGGCTaGCTTTTTCAGGTGCAAAAA +
Preference number: 4 (lower is better)
Translates to: WFINTVISLGCRPVSNTALEHDG*LFQVQK
Trigger: TTTTTGCACCTGAAAAAGGCAGCCATCGTGTTCCAG...TGCTGTATTACTAACAGGTCTACAGCCCAGAGAGATAACTGTATTTATAAACCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp TGGTTTATAAATACAGTTATCTCTCTGGGCTGTAGACCTGTTAGTAATACAGCATGTAATTCTTCTGTATaGTCACCACACCACAGAGGA +
Preference number: 4 (lower is better)
Translates to: WFINTVISLGCRPVSNTACNSSV*SPHHRG
Trigger: TCCTCTGTGGTGTGGTGACCATACAGAAGAATTACA...TGCTGTATTACTAACAGGTCTACAGCCCAGAGAGATAACTGTATTTATAAACCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp TGGTTTATAAATACAGTTATCTCTCTGGGCTGTAGACCTGTTAGTAATACAGCACGTATCCTTTTCAGGTaGAACTTGAGGTATTTGAGG +
Preference number: 4 (lower is better)
Translates to: WFINTVISLGCRPVSNTARILFR*NLRYLR
Trigger: CCTCAAATACCTCAAGTTCCACCTGAAAAGGATACG...TGCTGTATTACTAACAGGTCTACAGCCCAGAGAGATAACTGTATTTATAAACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp TGGTTTATAAATACAGTTATCTCTCTGGGCTGTAGACCTGTTAGTAATACAGCAAGGATGTGCTCATACTaGAAGACTTCTAACGGTTTG +
Preference number: 4 (lower is better)
Translates to: WFINTVISLGCRPVSNTARMCSY*KTSNGL
Trigger: CAAACCGTTAGAAGTCTTCCAGTATGAGCACATCCT...TGCTGTATTACTAACAGGTCTACAGCCCAGAGAGATAACTGTATTTATAAACCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CCA 90 bp CGACATGGTTATATCTGCAATCTAGCCAGAGTGATAACACAAGTTACCCTTCAATTGAACTGCTCAAAGTaGTTAACCTCGAAGTTTTCA +
Preference number: 4 (lower is better)
Translates to: RHGYICNLARVITQVTLQLNCSK*LTSKFS
Trigger: TGAAAACTTCGAGGTTAACCACTTTGAGCAGTTCAA...TTGAAGGGTAACTTGTGTTATCACTCTGGCTAGATTGCAGATATAACCATGTCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS GCA 90 bp CCTTCTGCCGAACCACCGACCCGGTCCGGAAGCTCCGCCGCAGCGTaGCCTCCAGGAAGCTGGTCCGTCTCTTCTCGAGGCGCTCGTACG +
Preference number: 5 (lower is better)
Translates to: PSAEPPTRSGSSAAA*PPGSWSVSSRGART
Trigger: CGTACGAGCGCCTCGAGAAGAGACGGACCAGCTTCCTGGAGGGCACGCTGCGGCGGAGCTTCCGGACCGGGTCGGTGGTTCGGCAGAAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS GCA 90 bp TCGTCGCTCGTCCGGATGCCACTCGTTCGCTGGTCGGAGTGGCCGTaGTCGCTGGGGTTGGGCGAGTCCTTGAAGGCGTCGTCATCCGCC +
Preference number: 5 (lower is better)
Translates to: SSLVRMPLVRWSEWP*SLGLGESLKASSSA
Trigger: GGCGGATGACGACGCCTTCAAGGACTCGCCCAACCCCAGCGAGCACGGCCACTCCGACCAGCGAACGAGTGGCATCCGGACGAGCGACGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS TCA 90 bp TTCGCTGGTCGGAGTGGCCGTGCTCGCTGGGGTTGGGCGAGTCCTTaGAGGCGTCGTCATCCGCCTCGAAGCCCTCGTCCACCTCCTCCT +
Preference number: 5 (lower is better)
Translates to: FAGRSGRARWGWASP*RRRHPPRSPRPPPP
Trigger: AGGAGGAGGTGGACGAGGGCTTCGAGGCGGATGACGACGCCTTCAAGGACTCGCCCAACCCCAGCGAGCACGGCCACTCCGACCAGCGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS GCA 90 bp CAGGCCTCATCCTCCAGCCTGCGCAACTCCTCATCCCGCAGCTGCTaGAGCTTCTGCAGGGAGGCCTCGGTCAACGACAGCTCCTGCCGC +
Preference number: 5 (lower is better)
Translates to: QASSSSLRNSSSRSC*SFCREASVNDSSCR
Trigger: GCGGCAGGAGCTGTCGTTGACCGAGGCCTCCCTGCAGAAGCTGCAGCAGCTGCGGGATGAGGAGTTGCGCAGGCTGGAGGATGAGGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS GCA 90 bp ACTCCAAGAACTCCTGGGCGGCGCGGCAGGCCTCATCCTCCAGCCTaGGCAACTCCTCATCCCGCAGCTGCTGCAGCTTCTGCAGGGAGG +
Preference number: 5 (lower is better)
Translates to: TPRTPGRRGRPHPPA*ATPHPAAAAASAGR
Trigger: CCTCCCTGCAGAAGCTGCAGCAGCTGCGGGATGAGGAGTTGCGCAGGCTGGAGGATGAGGCCTGCCGCGCCGCCCAGGAGTTCTTGGAGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CCA 90 bp GCGGTGGAAGCTCGCCCAGGTGGCACCTGCTGTACTCCTCCATGGTaGCGCGCTCGTACAGGCCAGCGATGGGCTGGTAGGGGTTCACTG +
Preference number: 5 (lower is better)
Translates to: AVEARPGGTCCTPPW*RARTGQRWAGRGSL
Trigger: CAGTGAACCCCTACCAGCCCATCGCTGGCCTGTACGAGCGCGCCACCATGGAGGAGTACAGCAGGTGCCACCTGGGCGAGCTTCCACCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000110457.8
ENSMUST00000137601.8
CDS-3UTR CAA 90 bp GGGTCAGGACCAGGCGCTGGCCCAGGCAAAGAGTGGCACGTTCACATCGGCAAGCCGTGCTCGCTGGGGTaGGGCGAGTCCTTGAAGGCG +
Preference number: 5 (lower is better)
Translates to: GSGPGAGPGKEWHVHIGKPCSLG*GESLKA
Trigger: CGCCTTCAAGGACTCGCCCAACCCCAGCGAGCACGG...CTTGCCGATGTGAACGTGCCACTCTTTGCCTGGGCCAGCGCCTGGTCCTGACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CCA 90 bp GATGAGTCGTCGCTCGTCCGGATGCCACTCGTTCGCTGGTCGGAGTaGCCGTGCTCGCTGGGGTTGGGCGAGTCCTTGAAGGCGTCGTCA +
Preference number: 5 (lower is better)
Translates to: DESSLVRMPLVRWSE*PCSLGLGESLKASS
Trigger: TGACGACGCCTTCAAGGACTCGCCCAACCCCAGCGAGCACGGCCACTCCGACCAGCGAACGAGTGGCATCCGGACGAGCGACGACTCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CCA 90 bp TCCTCCTCGGATGAGTCGTCGCTCGTCCGGATGCCACTCGTTCGCTaGTCGGAGTGGCCGTGCTCGCTGGGGTTGGGCGAGTCCTTGAAG +
Preference number: 5 (lower is better)
Translates to: SSSDESSLVRMPLVR*SEWPCSLGLGESLK
Trigger: CTTCAAGGACTCGCCCAACCCCAGCGAGCACGGCCACTCCGACCAGCGAACGAGTGGCATCCGGACGAGCGACGACTCATCCGAGGAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CCA 90 bp TGTGCGGTGGAAGCTCGCCCAGGTGGCACCTGCTGTACTCCTCCATaGTGGCGCGCTCGTACAGGCCAGCGATGGGCTGGTAGGGGTTCA +
Preference number: 5 (lower is better)
Translates to: CAVEARPGGTCCTPP*WRARTGQRWAGRGS
Trigger: TGAACCCCTACCAGCCCATCGCTGGCCTGTACGAGCGCGCCACCATGGAGGAGTACAGCAGGTGCCACCTGGGCGAGCTTCCACCGCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000110457.8
ENSMUST00000137601.8
CDS TCA 90 bp GGGAGCGCTCGATGTTGCGGACGCACTCGTCGATCTCGTCGAAGTTaGGCGACTCCAAGAACTCCTGGGCGGCGCGGCAGGCCTCATCCT +
Preference number: 5 (lower is better)
Translates to: GSARCCGRTRRSRRS*ATPRTPGRRGRPHP
Trigger: AGGATGAGGCCTGCCGCGCCGCCCAGGAGTTCTTGGAGTCGCTCAACTTCGACGAGATCGACGAGTGCGTCCGCAACATCGAGCGCTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS GCA 90 bp CGGGACAGCGTGGAGGAGCCCCCGCCTTTCTTGTGCAGCCAGCCTTaGTTGAGGGCTTCCTGCTTGGAGCGGAACCACAGGAAGGTCTCG +
Preference number: 5 (lower is better)
Translates to: RDSVEEPPPFLCSQP*LRASCLERNHRKVS
Trigger: CGAGACCTTCCTGTGGTTCCGCTCCAAGCAGGAAGCCCTCAAGCAAGGCTGGCTGCACAAGAAAGGCGGGGGCTCCTCCACGCTGTCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS GCA 90 bp TGGCAATGGCGAAGATGTGCGGTGGAAGCTCGCCCAGGTGGCACCTaGTGTACTCCTCCATGGTGGCGCGCTCGTACAGGCCAGCGATGG +
Preference number: 5 (lower is better)
Translates to: WQWRRCAVEARPGGT*CTPPWWRARTGQRW
Trigger: CCATCGCTGGCCTGTACGAGCGCGCCACCATGGAGGAGTACAGCAGGTGCCACCTGGGCGAGCTTCCACCGCACATCTTCGCCATTGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000110457.8
ENSMUST00000137601.8
CDS TCA 90 bp ACGGTTTGCCCTCTCCACGCTTGTAGACAGACACGGCGTCTGCGCTaGCGCCCAGCCAGAGCTCCTGGGGGAAGCCGCCTTCTTTGCACT +
Preference number: 5 (lower is better)
Translates to: TVCPLHACRQTRRLR*RPARAPGGSRLLCT
Trigger: AGTGCAAAGAAGGCGGCTTCCCCCAGGAGCTCTGGCTGGGCGTCAGCGCAGACGCCGTGTCTGTCTACAAGCGTGGAGAGGGCAAACCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS GCA 90 bp AGTTCATGTAAGGGTCCTCCTCGGATGAGTCGTCGCTCGTCCGGATaGCACTCGTTCGCTGGTCGGAGTGGCCGTGCTCGCTGGGGTTGG +
Preference number: 5 (lower is better)
Translates to: SSCKGPPRMSRRSSG*HSFAGRSGRARWGW
Trigger: CCAACCCCAGCGAGCACGGCCACTCCGACCAGCGAACGAGTGGCATCCGGACGAGCGACGACTCATCCGAGGAGGACCCTTACATGAACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CCA 90 bp ACGCACTCGTCGATCTCGTCGAAGTTGAGCGACTCCAAGAACTCCTaGGCGGCGCGGCAGGCCTCATCCTCCAGCCTGCGCAACTCCTCA +
Preference number: 5 (lower is better)
Translates to: THSSISSKLSDSKNS*AARQASSSSLRNSS
Trigger: TGAGGAGTTGCGCAGGCTGGAGGATGAGGCCTGCCGCGCCGCCCAGGAGTTCTTGGAGTCGCTCAACTTCGACGAGATCGACGAGTGCGT
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp GGGTCAGGACCAGGCGCTGGCCCAGGCAAAGAGTGGCACGTTCACATCGGCAAGTGCAGCCAGCCTTGCTaGAGGGCTTCCTGCTTGGAG +
Preference number: 5 (lower is better)
Translates to: GSGPGAGPGKEWHVHIGKCSQPC*RASCLE
Trigger: CTCCAAGCAGGAAGCCCTCAAGCAAGGCTGGCTGCA...CTTGCCGATGTGAACGTGCCACTCTTTGCCTGGGCCAGCGCCTGGTCCTGACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp GGGTCAGGACCAGGCGCTGGCCCAGGCAAAGAGTGGCACGTTCACATCGGCAAGGTGGGCCGCCGGTGTTaGCTTCCGCATTTCAAGGTG +
Preference number: 5 (lower is better)
Translates to: GSGPGAGPGKEWHVHIGKVGRRC*LPHFKV
Trigger: CACCTTGAAATGCGGAAGCAAACACCGGCGGCCCAC...CTTGCCGATGTGAACGTGCCACTCTTTGCCTGGGCCAGCGCCTGGTCCTGACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS TCA 90 bp GCTGGTGGGCACCACCGTGTAGTTCATGTAAGGGTCCTCCTCGGATaGGTCGTCGCTCGTCCGGATGCCACTCGTTCGCTGGTCGGAGTG +
Preference number: 5 (lower is better)
Translates to: AGGHHRVVHVRVLLG*VVARPDATRSLVGV
Trigger: CACTCCGACCAGCGAACGAGTGGCATCCGGACGAGCGACGACTCATCCGAGGAGGACCCTTACATGAACTACACGGTGGTGCCCACCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS TCA 90 bp ACAGCGTGGAGGAGCCCCCGCCTTTCTTGTGCAGCCAGCCTTGCTTaGGGGCTTCCTGCTTGGAGCGGAACCACAGGAAGGTCTCGTCCT +
Preference number: 5 (lower is better)
Translates to: TAWRSPRLSCAASLA*GLPAWSGTTGRSRP
Trigger: AGGACGAGACCTTCCTGTGGTTCCGCTCCAAGCAGGAAGCCCTCAAGCAAGGCTGGCTGCACAAGAAAGGCGGGGGCTCCTCCACGCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS TCA 90 bp CCCACGCTGCCGGGATGGGGCACCTTGTTGGTCTGTTTGATGAGCTaGCAATACAGTTCATCCCGCAGAGGCCGCAGGTCGTGCCCGGTC +
Preference number: 5 (lower is better)
Translates to: PTLPGWGTLLVCLMS*QYSSSRRGRRSCPV
Trigger: GACCGGGCACGACCTGCGGCCTCTGCGGGATGAACTGTATTGTCAGCTCATCAAACAGACCAACAAGGTGCCCCATCCCGGCAGCGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS GCA 90 bp AGGGAGGCCTCGGTCAACGACAGCTCCTGCCGCTCCTTCATGCGCTaGAGATCCTCGATTTCCTTCTCCAGGCGGAGGATCTCCTCCACC +
Preference number: 5 (lower is better)
Translates to: REASVNDSSCRSFMR*RSSISFSRRRISST
Trigger: GGTGGAGGAGATCCTCCGCCTGGAGAAGGAAATCGAGGATCTGCAGCGCATGAAGGAGCGGCAGGAGCTGTCGTTGACCGAGGCCTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
ENSMUST00000135981.8
CDS GCA 90 bp ACGATGAACTCCTGGCCCTCCACCCTGGTGTCCCCCTTGGATCTCTaGAGCAGGGTTATCCAGTGGTGCATCTCCTCTGGGGTGTCCGCG +
Preference number: 5 (lower is better)
Translates to: TMNSWPSTLVSPLDL*SRVIQWCISSGVSA
Trigger: CGCGGACACCCCAGAGGAGATGCACCACTGGATAACCCTGCTGCAGAGATCCAAGGGGGACACCAGGGTGGAGGGCCAGGAGTTCATCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CCA 90 bp TCCACCCTGGTGTCCCCCTTGGATCTCTGCAGCAGGGTTATCCAGTaGTGCATCTCCTCTGGGGTGTCCGCGTTACAGTGCAGCACCCGG +
Preference number: 5 (lower is better)
Translates to: STLVSPLDLCSRVIQ*CISSGVSALQCSTR
Trigger: CCGGGTGCTGCACTGTAACGCGGACACCCCAGAGGAGATGCACCACTGGATAACCCTGCTGCAGAGATCCAAGGGGGACACCAGGGTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CCA 90 bp TCATCCCGCAGAGGCCGCAGGTCGTGCCCGGTCTGCAGGATGCCCTaGATGATAGGGATGGGGTCGGACATGGACTCCAGTTGTTGGAGA +
Preference number: 5 (lower is better)
Translates to: SSRRGRRSCPVCRMP*MIGMGSDMDSSCWR
Trigger: TCTCCAACAACTGGAGTCCATGTCCGACCCCATCCCTATCATCCAGGGCATCCTGCAGACCGGGCACGACCTGCGGCCTCTGCGGGATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CCA 90 bp CATTCGTTGGCAATGGCGAAGATGTGCGGTGGAAGCTCGCCCAGGTaGCACCTGCTGTACTCCTCCATGGTGGCGCGCTCGTACAGGCCA +
Preference number: 5 (lower is better)
Translates to: HSLAMAKMCGGSSPR*HLLYSSMVARSYRP
Trigger: TGGCCTGTACGAGCGCGCCACCATGGAGGAGTACAGCAGGTGCCACCTGGGCGAGCTTCCACCGCACATCTTCGCCATTGCCAACGAATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000110457.8
ENSMUST00000137601.8
CDS-3UTR CAA 90 bp GGGTCAGGACCAGGCGCTGGCCCAGGCAAAGAGTGGCACGTTCACATCGGCAAGTTGAGGGCTTCCTGCTaGGAGCGGAACCACAGGAAG +
Preference number: 5 (lower is better)
Translates to: GSGPGAGPGKEWHVHIGKLRASC*ERNHRK
Trigger: CTTCCTGTGGTTCCGCTCCAAGCAGGAAGCCCTCAA...CTTGCCGATGTGAACGTGCCACTCTTTGCCTGGGCCAGCGCCTGGTCCTGACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp GGGTCAGGACCAGGCGCTGGCCCAGGCAAAGAGTGGCACGTTCACATCGGCAAGTGGAACTTGAGGTATTaGAGGATCCCGCGGCTCGGC +
Preference number: 5 (lower is better)
Translates to: GSGPGAGPGKEWHVHIGKWNLRY*RIPRLG
Trigger: GCCGAGCCGCGGGATCCTCAAATACCTCAAGTTCCA...CTTGCCGATGTGAACGTGCCACTCTTTGCCTGGGCCAGCGCCTGGTCCTGACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS GCA 90 bp TCTGCAGGGAGGCCTCGGTCAACGACAGCTCCTGCCGCTCCTTCATaGGCTGCAGATCCTCGATTTCCTTCTCCAGGCGGAGGATCTCCT +
Preference number: 5 (lower is better)
Translates to: SAGRPRSTTAPAAPS*AADPRFPSPGGGSP
Trigger: AGGAGATCCTCCGCCTGGAGAAGGAAATCGAGGATCTGCAGCGCATGAAGGAGCGGCAGGAGCTGTCGTTGACCGAGGCCTCCCTGCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
ENSMUST00000135981.8
CDS GCA 90 bp AGCTGCTGCAGCTTCTGCAGGGAGGCCTCGGTCAACGACAGCTCCTaGCGCTCCTTCATGCGCTGCAGATCCTCGATTTCCTTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: SCCSFCREASVNDSS*RSFMRCRSSISFSR
Trigger: CCTGGAGAAGGAAATCGAGGATCTGCAGCGCATGAAGGAGCGGCAGGAGCTGTCGTTGACCGAGGCCTCCCTGCAGAAGCTGCAGCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
ENSMUST00000135981.8
CDS GCA 90 bp GAGCCCCCGCCTTTCTTGTGCAGCCAGCCTTGCTTGAGGGCTTCCTaGTTGGAGCGGAACCACAGGAAGGTCTCGTCCTTCAGGACACAC +
Preference number: 5 (lower is better)
Translates to: EPPPFLCSQPCLRAS*LERNHRKVSSFRTH
Trigger: GTGTGTCCTGAAGGACGAGACCTTCCTGTGGTTCCGCTCCAAGCAGGAAGCCCTCAAGCAAGGCTGGCTGCACAAGAAAGGCGGGGGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS GCA 90 bp ACCCTGGTGTCCCCCTTGGATCTCTGCAGCAGGGTTATCCAGTGGTaGATCTCCTCTGGGGTGTCCGCGTTACAGTGCAGCACCCGGTTG +
Preference number: 5 (lower is better)
Translates to: TLVSPLDLCSRVIQW*ISSGVSALQCSTRL
Trigger: CAACCGGGTGCTGCACTGTAACGCGGACACCCCAGAGGAGATGCACCACTGGATAACCCTGCTGCAGAGATCCAAGGGGGACACCAGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS GCA 90 bp CCATGGAGCTCGGCCAGGGAAGCCATGTCGTCCACGCCCTCCTCGTaGAGGGGGTGCATAGCTGTCACCTTCTGGTTGGTGATTGTACTC +
Preference number: 5 (lower is better)
Translates to: PWSSAREAMSSTPSS*RGCIAVTFWLVIVL
Trigger: GAGTACAATCACCAACCAGAAGGTGACAGCTATGCACCCCCTGCACGAGGAGGGCGTGGACGACATGGCTTCCCTGGCCGAGCTCCATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000110457.8
ENSMUST00000137601.8
CDS CCA 90 bp GTCCACCTCCTCCTCCGCGGGGTAGGGCTGGCTGAAGTTGAAGTTTaGCTTCTCTCCGCTGGCACTCTCGGCAAGCTCACTGAGCTCTTC +
Preference number: 5 (lower is better)
Translates to: VHLLLRGVGLAEVEV*LLSAGTLGKLTELF
Trigger: GAAGAGCTCAGTGAGCTTGCCGAGAGTGCCAGCGGAGAGAAGCCAAACTTCAACTTCAGCCAGCCCTACCCCGCGGAGGAGGAGGTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CCA 90 bp CCTGCATGGACGCAGCAAGAAGCACCGTACTGTCGGCACTGGGGCTaGTGGGCACCACCGTGTAGTTCATGTAAGGGTCCTCCTCGGATG +
Preference number: 5 (lower is better)
Translates to: PAWTQQEAPYCRHWG*WAPPCSSCKGPPRM
Trigger: CATCCGAGGAGGACCCTTACATGAACTACACGGTGGTGCCCACCAGCCCCAGTGCCGACAGTACGGTGCTTCTTGCTGCGTCCATGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CCA 90 bp CGGAGTCCTGCATGGACGCAGCAAGAAGCACCGTACTGTCGGCACTaGGGCTGGTGGGCACCACCGTGTAGTTCATGTAAGGGTCCTCCT +
Preference number: 5 (lower is better)
Translates to: RSPAWTQQEAPYCRH*GWWAPPCSSCKGPP
Trigger: AGGAGGACCCTTACATGAACTACACGGTGGTGCCCACCAGCCCCAGTGCCGACAGTACGGTGCTTCTTGCTGCGTCCATGCAGGACTCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CCA 90 bp GCATGGACGCAGCAAGAAGCACCGTACTGTCGGCACTGGGGCTGGTaGGCACCACCGTGTAGTTCATGTAAGGGTCCTCCTCGGATGAGT +
Preference number: 5 (lower is better)
Translates to: AWTQQEAPYCRHWGW*APPCSSCKGPPRMS
Trigger: ACTCATCCGAGGAGGACCCTTACATGAACTACACGGTGGTGCCCACCAGCCCCAGTGCCGACAGTACGGTGCTTCTTGCTGCGTCCATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CCA 90 bp CCACAAGCAGCGATAGCATTCGTTGGCAATGGCGAAGATGTGCGGTaGAAGCTCGCCCAGGTGGCACCTGCTGTACTCCTCCATGGTGGC +
Preference number: 5 (lower is better)
Translates to: PQAAIAFVGNGEDVR*KLAQVAPAVLLHGG
Trigger: GCCACCATGGAGGAGTACAGCAGGTGCCACCTGGGCGAGCTTCCACCGCACATCTTCGCCATTGCCAACGAATGCTATCGCTGCTTGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000110457.8
ENSMUST00000137601.8
CDS-3UTR CAA 90 bp CTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCTCTGCATGCAGCCAGCCTTGCTaGAGGGCTTCCTGCTTGGAG +
Preference number: 5 (lower is better)
Translates to: LGRLVHNQWIHAPPPSSACSQPC*RASCLE
Trigger: CTCCAAGCAGGAAGCCCTCAAGCAAGGCTGGCTGCA...TGCAGAGCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp CTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCTCTGCAACCCTGGTGTCCCCCTaGGATCTCTGCAGCAGGGTT +
Preference number: 5 (lower is better)
Translates to: LGRLVHNQWIHAPPPSSATLVSP*DLCSRV
Trigger: AACCCTGCTGCAGAGATCCAAGGGGGACACCAGGGT...TGCAGAGCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS TCA 90 bp GTCGAAGTCCTCCTCGCTGTCTTCAAAGGAGGACTGCGCCCCTTCTaGGCTGAACCGGTACGCTCCGGAACTGTTGTAGGTTCCCACGGA +
Preference number: 5 (lower is better)
Translates to: VEVLLAVFKGGLRPF*AEPVRSGTVVGSHG
Trigger: TCCGTGGGAACCTACAACAGTTCCGGAGCGTACCGGTTCAGCTCAGAAGGGGCGCAGTCCTCCTTTGAAGACAGCGAGGAGGACTTCGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS GCA 90 bp CTCCAGCTCCCGTTTCTCAGCCAACAGCTGCCTGTAAACCCTGCGTaGCAGCTGTCCTCGCAGTTGCTTCTGGAACACGATGGCTGCCTT +
Preference number: 5 (lower is better)
Translates to: LQLPFLSQQLPVNPA*QLSSQLLLEHDGCL
Trigger: AAGGCAGCCATCGTGTTCCAGAAGCAACTGCGAGGACAGCTGGCACGCAGGGTTTACAGGCAGCTGTTGGCTGAGAAACGGGAGCTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
ENSMUST00000124966.8
ENSMUST00000125667.3
ENSMUST00000135173.8
ENSMUST00000135981.8
ENSMUST00000137601.8
CDS CCA 90 bp CCCCTTGGATCTCTGCAGCAGGGTTATCCAGTGGTGCATCTCCTCTaGGGTGTCCGCGTTACAGTGCAGCACCCGGTTGGCTGTGATGAT +
Preference number: 5 (lower is better)
Translates to: PLGSLQQGYPVVHLL*GVRVTVQHPVGCDD
Trigger: ATCATCACAGCCAACCGGGTGCTGCACTGTAACGCGGACACCCCAGAGGAGATGCACCACTGGATAACCCTGCTGCAGAGATCCAAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CCA 90 bp GTCCGTTGTACTCAAACAAGGCAAACATGTTCCTGCTGTCCTCCATaGCGAGCCCTCGGATCAGCTTCTCCACCACCTCCCCGGCTGTGG +
Preference number: 5 (lower is better)
Translates to: VRCTQTRQTCSCCPP*RALGSASPPPPRLW
Trigger: CCACAGCCGGGGAGGTGGTGGAGAAGCTGATCCGAGGGCTCGCCATGGAGGACAGCAGGAACATGTTTGCCTTGTTTGAGTACAACGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CCA 90 bp GGTTGTCATGGCGCTTCCACAAGCAGCGATAGCATTCGTTGGCAATaGCGAAGATGTGCGGTGGAAGCTCGCCCAGGTGGCACCTGCTGT +
Preference number: 5 (lower is better)
Translates to: GCHGASTSSDSIRWQ*RRCAVEARPGGTCC
Trigger: ACAGCAGGTGCCACCTGGGCGAGCTTCCACCGCACATCTTCGCCATTGCCAACGAATGCTATCGCTGCTTGTGGAAGCGCCATGACAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000110457.8
ENSMUST00000137601.8
CDS-3UTR CAA 90 bp CTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCTCTGCAGTTCTTGCTGCCTCCTaGTCTCTGCCTCCTGATGGG +
Preference number: 5 (lower is better)
Translates to: LGRLVHNQWIHAPPPSSAVLAAS*SLPPDG
Trigger: CCCATCAGGAGGCAGAGACAAGGAGGCAGCAAGAAC...TGCAGAGCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp ATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCTTGAGGGCTTCCTGCTaGGAGCGGAACCACAGGAAG +
Preference number: 5 (lower is better)
Translates to: IRLGRLVHNQWIHAPPPSLRASC*ERNHRK
Trigger: CTTCCTGTGGTTCCGCTCCAAGCAGGAAGCCCTCAA...GCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp CTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCTCTGCACTTGTGCAGCCAGCCTaGCTTGAGGGCTTCCTGCTT +
Preference number: 5 (lower is better)
Translates to: LGRLVHNQWIHAPPPSSALVQPA*LEGFLL
Trigger: AAGCAGGAAGCCCTCAAGCAAGGCTGGCTGCACAAG...TGCAGAGCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp GGGTCAGGACCAGGCGCTGGCCCAGGCAAAGAGTGGCACGTTCACATCGGCAAGCAGCATTCTGGGGGTTaGCCTGCTCATCATGCATTT +
Preference number: 5 (lower is better)
Translates to: GSGPGAGPGKEWHVHIGKQHSGG*PAHHAF
Trigger: AAATGCATGATGAGCAGGCAAACCCCCAGAATGCTG...CTTGCCGATGTGAACGTGCCACTCTTTGCCTGGGCCAGCGCCTGGTCCTGACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp ATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCGAGTTGATGGTGATCTaGCAGGAGCCTCCGCCATGG +
Preference number: 5 (lower is better)
Translates to: IRLGRLVHNQWIHAPPPSELMVI*QEPPPW
Trigger: CCATGGCGGAGGCTCCTGCAAGATCACCATCAACTC...GCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS TCA 90 bp AGTCCTCCTCGCTGTCTTCAAAGGAGGACTGCGCCCCTTCTGAGCTaGACCGGTACGCTCCGGAACTGTTGTAGGTTCCCACGGAATACC +
Preference number: 5 (lower is better)
Translates to: SPPRCLQRRTAPLLS*TGTLRNCCRFPRNT
Trigger: GGTATTCCGTGGGAACCTACAACAGTTCCGGAGCGTACCGGTTCAGCTCAGAAGGGGCGCAGTCCTCCTTTGAAGACAGCGAGGAGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS GCA 90 bp TTTCCTCCAGCTCCCGTTTCTCAGCCAACAGCTGCCTGTAAACCCTaGGTGCCAGCTGTCCTCGCAGTTGCTTCTGGAACACGATGGCTG +
Preference number: 5 (lower is better)
Translates to: FPPAPVSQPTAACKP*VPAVLAVASGTRWL
Trigger: CAGCCATCGTGTTCCAGAAGCAACTGCGAGGACAGCTGGCACGCAGGGTTTACAGGCAGCTGTTGGCTGAGAAACGGGAGCTGGAGGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
ENSMUST00000124966.8
ENSMUST00000125667.3
ENSMUST00000135173.8
ENSMUST00000135981.8
CDS GCA 90 bp TCTCCCCTGAGGATCATGGATCTCTGGGTCAGTGCATCTGTGAGCTaGGTTGGGTCCAGCCCAAGCAAGTCCGCAGACCTACCCAAAGCT +
Preference number: 5 (lower is better)
Translates to: SPLRIMDLWVSASVS*VGSSPSKSADLPKA
Trigger: AGCTTTGGGTAGGTCTGCGGACTTGCTTGGGCTGGACCCAACGCAGCTCACAGATGCACTGACCCAGAGATCCATGATCCTCAGGGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000110457.8
ENSMUST00000137601.8
CDS GCA 90 bp CGTCAGGATCTCTTCTCCCCTGAGGATCATGGATCTCTGGGTCAGTaGATCTGTGAGCTGCGTTGGGTCCAGCCCAAGCAAGTCCGCAGA +
Preference number: 5 (lower is better)
Translates to: RQDLFSPEDHGSLGQ*ICELRWVQPKQVRR
Trigger: TCTGCGGACTTGCTTGGGCTGGACCCAACGCAGCTCACAGATGCACTGACCCAGAGATCCATGATCCTCAGGGGAGAAGAGATCCTGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000110457.8
ENSMUST00000137601.8
CDS CCA 90 bp ACGCTGAACCATTGGCTGGCATCTTCGGGGGACTCCGCGATGAGATaGAAGGTCCTGTCGGCCAGGATGATGTCGATCCCGTTCTCTTTG +
Preference number: 5 (lower is better)
Translates to: TLNHWLASSGDSAMR*KVLSARMMSIPFSL
Trigger: CAAAGAGAACGGGATCGACATCATCCTGGCCGACAGGACCTTCCATCTCATCGCGGAGTCCCCCGAAGATGCCAGCCAATGGTTCAGCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CCA 90 bp TGCTGGGTGGGCGTGTCGATTGGAGCCTTGGTGTCAGTCACATTCTaGATGGCGCTGGACCACCTAGTCGCCTCGTTCAGTAGTTTCGTG +
Preference number: 5 (lower is better)
Translates to: CWVGVSIGALVSVTF*MALDHLVASFSSFV
Trigger: CACGAAACTACTGAACGAGGCGACTAGGTGGTCCAGCGCCATCCAGAATGTGACTGACACCAAGGCTCCAATCGACACGCCCACCCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CCA 90 bp AATGCGAGCTCTGAGTCTCTGCACAGAGTAAACCTCCTCGAGGGGTaGGATGGAGGTGTGCGGGGTATAGTCGCCCTGCAGATACTGCAG +
Preference number: 5 (lower is better)
Translates to: NASSESLHRVNLLEG*DGGVRGIVALQILQ
Trigger: CTGCAGTATCTGCAGGGCGACTATACCCCGCACACCTCCATCCCACCCCTCGAGGAGGTTTACTCTGTGCAGAGACTCAGAGCTCGCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CCA 90 bp CACATTGGTTGTCATGGCGCTTCCACAAGCAGCGATAGCATTCGTTaGCAATGGCGAAGATGTGCGGTGGAAGCTCGCCCAGGTGGCACC +
Preference number: 5 (lower is better)
Translates to: HIGCHGASTSSDSIR*QWRRCAVEARPGGT
Trigger: GGTGCCACCTGGGCGAGCTTCCACCGCACATCTTCGCCATTGCCAACGAATGCTATCGCTGCTTGTGGAAGCGCCATGACAACCAATGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000110457.8
ENSMUST00000137601.8
CDS CCA 90 bp CTGAGAGGCGTCAGGATCTCTTCTCCCCTGAGGATCATGGATCTCTaGGTCAGTGCATCTGTGAGCTGCGTTGGGTCCAGCCCAAGCAAG +
Preference number: 5 (lower is better)
Translates to: LRGVRISSPLRIMDL*VSASVSCVGSSPSK
Trigger: CTTGCTTGGGCTGGACCCAACGCAGCTCACAGATGCACTGACCCAGAGATCCATGATCCTCAGGGGAGAAGAGATCCTGACGCCTCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000110457.8
ENSMUST00000137601.8
CDS-3UTR CAA 90 bp GAGTGTGTGAACACATGCATGCGCGGGCAAGCACAGACAGTTGAAACAAAGCAACCGTGCTCGCTGGGGTaGGGCGAGTCCTTGAAGGCG +
Preference number: 5 (lower is better)
Translates to: ECVNTCMRGQAQTVETKQPCSLG*GESLKA
Trigger: CGCCTTCAAGGACTCGCCCAACCCCAGCGAGCACGG...TTGCTTTGTTTCAACTGTCTGTGCTTGCCCGCGCATGCATGTGTTCACACACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp ATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCGCTGTGGTGTGGGAGTaGATGGTGATCTTGCAGGAG +
Preference number: 5 (lower is better)
Translates to: IRLGRLVHNQWIHAPPPSAVVWE*MVILQE
Trigger: CTCCTGCAAGATCACCATCAACTCCCACACCACAGC...GCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp GGGTCAGGACCAGGCGCTGGCCCAGGCAAAGAGTGGCACGTTCACATCGGCAAGCTTTCCCTGAGCAGGTaGAGAAGGTCATCTCTGAAT +
Preference number: 5 (lower is better)
Translates to: GSGPGAGPGKEWHVHIGKLSLSR*RRSSLN
Trigger: ATTCAGAGATGACCTTCTCAACCTGCTCAGGGAAAG...CTTGCCGATGTGAACGTGCCACTCTTTGCCTGGGCCAGCGCCTGGTCCTGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS TCA 90 bp GGTGGCGCGCTCGTACAGGCCAGCGATGGGCTGGTAGGGGTTCACTaGCGCGATGATGGAGCCGATGTAGGTATAGATTTGGTTCCTTTT +
Preference number: 5 (lower is better)
Translates to: GGALVQASDGLVGVH*RDDGADVGIDLVPF
Trigger: AAAAGGAACCAAATCTATACCTACATCGGCTCCATCATCGCGTCAGTGAACCCCTACCAGCCCATCGCTGGCCTGTACGAGCGCGCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000110457.8
ENSMUST00000137601.8
CDS CCA 90 bp GCTGTGGTGTGGGAGTTGATGGTGATCTTGCAGGAGCCTCCGCCATaGCAATACACTGTGGACGTCATTTCCTGCCGGTGGATCAGAGCT +
Preference number: 5 (lower is better)
Translates to: AVVWELMVILQEPPP*QYTVDVISCRWIRA
Trigger: AGCTCTGATCCACCGGCAGGAAATGACGTCCACAGTGTATTGCCATGGCGGAGGCTCCTGCAAGATCACCATCAACTCCCACACCACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp CCCTCATTTGCAGGAAATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCAAGGGAGCGCTCGATGTaGCGGACGCACTCGTCGATC +
Preference number: 5 (lower is better)
Translates to: PSFAGNQAGEVSAQSVDPRERSM*RTHSSI
Trigger: GATCGACGAGTGCGTCCGCAACATCGAGCGCTCCCT...TGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGATTTCCTGCAAATGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp CCCTCATTTGCAGGAAATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCATCCCCACTCGAGGAGTaGTGCAGGCTAGCGGAGTCC +
Preference number: 5 (lower is better)
Translates to: PSFAGNQAGEVSAQSVDPSPLEE*CRLAES
Trigger: GGACTCCGCTAGCCTGCACAACTCCTCGAGTGGGGA...TGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGATTTCCTGCAAATGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp CCCTCATTTGCAGGAAATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCAGAGCCCCCGCCTTTCTaGTGCAGCCAGCCTTGCTTG +
Preference number: 5 (lower is better)
Translates to: PSFAGNQAGEVSAQSVDPEPPPF*CSQPCL
Trigger: CAAGCAAGGCTGGCTGCACAAGAAAGGCGGGGGCTC...TGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGATTTCCTGCAAATGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp GGGTCAGGACCAGGCGCTGGCCCAGGCAAAGAGTGGCACGTTCACATCGGCAAGTTCTCTTTGCTTGTGTaGTCTATGATCTCCTTGGCG +
Preference number: 5 (lower is better)
Translates to: GSGPGAGPGKEWHVHIGKFSLLV*SMISLA
Trigger: CGCCAAGGAGATCATAGACAACACAAGCAAAGAGAA...CTTGCCGATGTGAACGTGCCACTCTTTGCCTGGGCCAGCGCCTGGTCCTGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp ATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCCAGTGCAGCACCCGGTaGGCTGTGATGATCACAAAT +
Preference number: 5 (lower is better)
Translates to: IRLGRLVHNQWIHAPPPSQCSTR*AVMITN
Trigger: ATTTGTGATCATCACAGCCAACCGGGTGCTGCACTG...GCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp CTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCTCTGCAGTGTCGATTGGAGCCTaGGTGTCAGTCACATTCTGG +
Preference number: 5 (lower is better)
Translates to: LGRLVHNQWIHAPPPSSAVSIGA*VSVTFW
Trigger: CCAGAATGTGACTGACACCAAGGCTCCAATCGACAC...TGCAGAGCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp ATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCATACTTGGCCATGGCTaGTTCCTGGTTCATCCCCTG +
Preference number: 5 (lower is better)
Translates to: IRLGRLVHNQWIHAPPPSILGHG*FLVHPL
Trigger: CAGGGGATGAACCAGGAACAAGCCATGGCCAAGTAT...GCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp ATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCGCTTTGAAGGATGGCTaGCTCGACGCTGGATGTCTT +
Preference number: 5 (lower is better)
Translates to: IRLGRLVHNQWIHAPPPSALKDG*LDAGCL
Trigger: AAGACATCCAGCGTCGAGCAAGCCATCCTTCAAAGC...GCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS TCA 90 bp TCATCATGCATTTCTCTGATCTCCTGGTCTGTGGACGAGTGGACCTaGCTCAGCACGCTGAACCATTGGCTGGCATCTTCGGGGGACTCC +
Preference number: 5 (lower is better)
Translates to: SSCISLISWSVDEWT*LSTLNHWLASSGDS
Trigger: GGAGTCCCCCGAAGATGCCAGCCAATGGTTCAGCGTGCTGAGTCAGGTCCACTCGTCCACAGACCAGGAGATCAGAGAAATGCATGATGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS GCA 90 bp ATCAGCCCGACATCCAGTGTGCCCACAGCATTCTGGGGGTTTGCCTaGTCATCATGCATTTCTCTGATCTCCTGGTCTGTGGACGAGTGG +
Preference number: 5 (lower is better)
Translates to: ISPTSSVPTAFWGFA*SSCISLISWSVDEW
Trigger: CCACTCGTCCACAGACCAGGAGATCAGAGAAATGCATGATGAGCAGGCAAACCCCCAGAATGCTGTGGGCACACTGGATGTCGGGCTGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS GCA 90 bp CCTTGTCCACCTGTCCGTTGTACTCAAACAAGGCAAACATGTTCCTaGTGTCCTCCATGGCGAGCCCTCGGATCAGCTTCTCCACCACCT +
Preference number: 5 (lower is better)
Translates to: PCPPVRCTQTRQTCS*CPPWRALGSASPPP
Trigger: AGGTGGTGGAGAAGCTGATCCGAGGGCTCGCCATGGAGGACAGCAGGAACATGTTTGCCTTGTTTGAGTACAACGGACAGGTGGACAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS GCA 90 bp ATGGCCGCACGGTCAATCTCCTCTTCCCGCCTCTTTTCCAGTTTCTaGTCCAAGGATTCTCGAAGGAAGACCTTGGTCTTCCCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: MAARSISSSRLFSSF*SKDSRRKTLVFPSC
Trigger: GCAGCTGGGGAAGACCAAGGTCTTCCTTCGAGAATCCTTGGAGCAGAAACTGGAAAAGAGGCGGGAAGAGGAGATTGACCGTGCGGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000110457.8
ENSMUST00000125667.3
ENSMUST00000135173.8
ENSMUST00000137601.8
CDS CCA 90 bp TCTCAAAGAGCAGCTCCCGCTCGTCAACTACGATCTTGTACGTGTTaGCCAGCGGTGCCCCGAACGAGAGGATGTGCTCATACTGGAAGA +
Preference number: 5 (lower is better)
Translates to: SQRAAPARQLRSCTC*PAVPRTRGCAHTGR
Trigger: TCTTCCAGTATGAGCACATCCTCTCGTTCGGGGCACCGCTGGCCAACACGTACAAGATCGTAGTTGACGAGCGGGAGCTGCTCTTTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp ATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCATCTCCTCCACCTGCTaGTTCTCCCTTTGCTTTTCC +
Preference number: 5 (lower is better)
Translates to: IRLGRLVHNQWIHAPPPSISSTC*FSLCFS
Trigger: GGAAAAGCAAAGGGAGAACAAGCAGGTGGAGGAGAT...GCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp CCCTCATTTGCAGGAAATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCAGGGTGGGCGTGTCGATaGGAGCCTTGGTGTCAGTCA +
Preference number: 5 (lower is better)
Translates to: PSFAGNQAGEVSAQSVDPGWACR*EPWCQS
Trigger: TGACTGACACCAAGGCTCCAATCGACACGCCCACCC...TGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGATTTCCTGCAAATGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp ATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCGTTCTCCTTAATATCTaGGATCAGCTGCTGGGTGGG +
Preference number: 5 (lower is better)
Translates to: IRLGRLVHNQWIHAPPPSVLLNI*DQLLGG
Trigger: CCCACCCAGCAGCTGATCCAAGATATTAAGGAGAAC...GCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp GGGTCAGGACCAGGCGCTGGCCCAGGCAAAGAGTGGCACGTTCACATCGGCAAGGGACATGGACTCCAGTaGTTGGAGAGAATTGAATAT +
Preference number: 5 (lower is better)
Translates to: GSGPGAGPGKEWHVHIGKGHGLQ*LERIEY
Trigger: ATATTCAATTCTCTCCAACAACTGGAGTCCATGTCC...CTTGCCGATGTGAACGTGCCACTCTTTGCCTGGGCCAGCGCCTGGTCCTGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp CTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCTCTGCAATGAGGACACATTGGTaGTCATGGCGCTTCCACAAG +
Preference number: 5 (lower is better)
Translates to: LGRLVHNQWIHAPPPSSAMRTHW*SWRFHK
Trigger: CTTGTGGAAGCGCCATGACAACCAATGTGTCCTCAT...TGCAGAGCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS TCA 90 bp ACTGGCTTCCATAGGAGTTGGAGAAAGTCACGCTGCTGCCTGACGTaGTGGCGCCATCCTCGTAATCGTCCTGGTCATAGTCATAGTCGC +
Preference number: 5 (lower is better)
Translates to: TGFHRSWRKSRCCLT*WRHPRNRPGHSHSR
Trigger: GCGACTATGACTATGACCAGGACGATTACGAGGATGGCGCCATCACGTCAGGCAGCAGCGTGACTTTCTCCAACTCCTATGGAAGCCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS TCA 90 bp GCTCGTACAGGCCAGCGATGGGCTGGTAGGGGTTCACTGACGCGATaGTGGAGCCGATGTAGGTATAGATTTGGTTCCTTTTGTAGCGCT +
Preference number: 5 (lower is better)
Translates to: ARTGQRWAGRGSLTR*WSRCRYRFGSFCSA
Trigger: AGCGCTACAAAAGGAACCAAATCTATACCTACATCGGCTCCATCATCGCGTCAGTGAACCCCTACCAGCCCATCGCTGGCCTGTACGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000110457.8
ENSMUST00000137601.8
CDS TCA 90 bp CTTGATCACCCACTCAAAGCAGCGAGCATAAAGTGCCATGGCCAATaGGTCTCTGCTATCTACGGCCTGCTGGACACTGAGAGGCGTCAG +
Preference number: 5 (lower is better)
Translates to: LDHPLKAASIKCHGQ*VSAIYGLLDTERRQ
Trigger: CTGACGCCTCTCAGTGTCCAGCAGGCCGTAGATAGCAGAGACTCATTGGCCATGGCACTTTATGCTCGCTGCTTTGAGTGGGTGATCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000110457.8
ENSMUST00000137601.8
CDS GCA 90 bp AGGGTTATCCAGTGGTGCATCTCCTCTGGGGTGTCCGCGTTACAGTaGAGCACCCGGTTGGCTGTGATGATCACAAATGAGTTGGGTCTA +
Preference number: 5 (lower is better)
Translates to: RVIQWCISSGVSALQ*STRLAVMITNELGL
Trigger: TAGACCCAACTCATTTGTGATCATCACAGCCAACCGGGTGCTGCACTGTAACGCGGACACCCCAGAGGAGATGCACCACTGGATAACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS GCA 90 bp TTGCAGGAGCCTCCGCCATGGCAATACACTGTGGACGTCATTTCCTaGCGGTGGATCAGAGCTTCGATTTCATCTCGGGAAGGCACAAAC +
Preference number: 5 (lower is better)
Translates to: LQEPPPWQYTVDVIS*RWIRASISSREGTN
Trigger: GTTTGTGCCTTCCCGAGATGAAATCGAAGCTCTGATCCACCGGCAGGAAATGACGTCCACAGTGTATTGCCATGGCGGAGGCTCCTGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CCA 90 bp GTTCTCCTTAATATCTTGGATCAGCTGCTGGGTGGGCGTGTCGATTaGAGCCTTGGTGTCAGTCACATTCTGGATGGCGCTGGACCACCT +
Preference number: 5 (lower is better)
Translates to: VLLNILDQLLGGRVD*SLGVSHILDGAGPP
Trigger: AGGTGGTCCAGCGCCATCCAGAATGTGACTGACACCAAGGCTCCAATCGACACGCCCACCCAGCAGCTGATCCAAGATATTAAGGAGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CCA 90 bp GAGCCTCCGCCATGGCAATACACTGTGGACGTCATTTCCTGCCGGTaGATCAGAGCTTCGATTTCATCTCGGGAAGGCACAAACTCTCTG +
Preference number: 5 (lower is better)
Translates to: EPPPWQYTVDVISCR*IRASISSREGTNSL
Trigger: CAGAGAGTTTGTGCCTTCCCGAGATGAAATCGAAGCTCTGATCCACCGGCAGGAAATGACGTCCACAGTGTATTGCCATGGCGGAGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp CCCTCATTTGCAGGAAATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCACAGCTGTCCTCGCAGTaGCTTCTGGAACACGATGGC +
Preference number: 5 (lower is better)
Translates to: PSFAGNQAGEVSAQSVDPQLSSQ*LLEHDG
Trigger: GCCATCGTGTTCCAGAAGCAACTGCGAGGACAGCTG...TGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGATTTCCTGCAAATGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp TCAGTAGCACAGTTAAGGTCGATTAGGGTCCACTCTGCAAGTTTAAGGCACTTCGGGTTGGGCGAGTCCTaGAAGGCGTCGTCATCCGCC +
Preference number: 5 (lower is better)
Translates to: SVAQLRSIRVHSASLRHFGLGES*KASSSA
Trigger: GGCGGATGACGACGCCTTCAAGGACTCGCCCAACCC...GAAGTGCCTTAAACTTGCAGAGTGGACCCTAATCGACCTTAACTGTGCTACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp CCCTCATTTGCAGGAAATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCACCGGGATGGGGCACCTaGTTGGTCTGTTTGATGAGC +
Preference number: 5 (lower is better)
Translates to: PSFAGNQAGEVSAQSVDPPGWGT*LVCLMS
Trigger: GCTCATCAAACAGACCAACAAGGTGCCCCATCCCGG...TGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGATTTCCTGCAAATGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp CTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCTCTGCACTTTTCAGGTGGAACTaGAGGTATTTGAGGATCCCG +
Preference number: 5 (lower is better)
Translates to: LGRLVHNQWIHAPPPSSALFRWN*RYLRIP
Trigger: CGGGATCCTCAAATACCTCAAGTTCCACCTGAAAAG...TGCAGAGCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp GGGTCAGGACCAGGCGCTGGCCCAGGCAAAGAGTGGCACGTTCACATCGGCAAGACAAACTCTCTGCATTaGGTTTTCTTAAGGGATTCG +
Preference number: 5 (lower is better)
Translates to: GSGPGAGPGKEWHVHIGKTNSLH*VFLRDS
Trigger: CGAATCCCTTAAGAAAACCAAATGCAGAGAGTTTGT...CTTGCCGATGTGAACGTGCCACTCTTTGCCTGGGCCAGCGCCTGGTCCTGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp CCCTCATTTGCAGGAAATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCAGAGTTGATGGTGATCTaGCAGGAGCCTCCGCCATGG +
Preference number: 5 (lower is better)
Translates to: PSFAGNQAGEVSAQSVDPELMVI*QEPPPW
Trigger: CCATGGCGGAGGCTCCTGCAAGATCACCATCAACTC...TGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGATTTCCTGCAAATGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp ATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCAACTTGAGGATCAGCTaGGTGCTTTCCGTTTTCCCA +
Preference number: 5 (lower is better)
Translates to: IRLGRLVHNQWIHAPPPSNLRIS*VLSVFP
Trigger: TGGGAAAACGGAAAGCACCAAGCTGATCCTCAAGTT...GCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp GGGTCAGGACCAGGCGCTGGCCCAGGCAAAGAGTGGCACGTTCACATCGGCAAGTATACTGTCTTCGCATaGCCAAATGCTTCCATGATT +
Preference number: 5 (lower is better)
Translates to: GSGPGAGPGKEWHVHIGKYTVFA*PNASMI
Trigger: AATCATGGAAGCATTTGGCAATGCGAAGACAGTATA...CTTGCCGATGTGAACGTGCCACTCTTTGCCTGGGCCAGCGCCTGGTCCTGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp ATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCCATTGCCGTGATAACTaGTCTGAAGGATTCCTGGTC +
Preference number: 5 (lower is better)
Translates to: IRLGRLVHNQWIHAPPPSHCRDN*SEGFLV
Trigger: GACCAGGAATCCTTCAGACAAGTTATCACGGCAATG...GCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp CTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCTCTGCATTCCTCCTTGCTGAATaGCATGACTTCCATTGCCGT +
Preference number: 5 (lower is better)
Translates to: LGRLVHNQWIHAPPPSSAFLLAE*HDFHCR
Trigger: ACGGCAATGGAAGTCATGCAATTCAGCAAGGAGGAA...TGCAGAGCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp ATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCAAGTCGTCTTTGCCTTaGATCCGGCTGTTGATCTTC +
Preference number: 5 (lower is better)
Translates to: IRLGRLVHNQWIHAPPPSKSSLP*IRLLIF
Trigger: GAAGATCAACAGCCGGATCAAAGGCAAAGACGACTT...GCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp CTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCTCTGCAAGGATGCCGATGGATTaGAAGTCGTCTTTGCCTTTG +
Preference number: 5 (lower is better)
Translates to: LGRLVHNQWIHAPPPSSARMPMD*KSSLPL
Trigger: CAAAGGCAAAGACGACTTCAAATCCATCGGCATCCT...TGCAGAGCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS TCA 90 bp CAGGCTGTTGAGGACCAGAGTGCCCAGTTTCAGAGCGTTCTTCTCTaGGCTCTTGTAGTAGTCCAGGGAATTGTGCGTCAGCACGAACCA +
Preference number: 5 (lower is better)
Translates to: QAVEDQSAQFQSVLL*ALVVVQGIVRQHEP
Trigger: TGGTTCGTGCTGACGCACAATTCCCTGGACTACTACAAGAGCTCAGAGAAGAACGCTCTGAAACTGGGCACTCTGGTCCTCAACAGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS TCA 90 bp CTCCTGGGGGAAGCCGCCTTCTTTGCACTCCACATCAAAGAGTGTTaGTCCATAACCAGGCCACTCCTTGATCAGGGCCATATACTTGGC +
Preference number: 5 (lower is better)
Translates to: LLGEAAFFALHIKEC*SITRPLLDQGHILG
Trigger: GCCAAGTATATGGCCCTGATCAAGGAGTGGCCTGGTTATGGATCAACACTCTTTGATGTGGAGTGCAAAGAAGGCGGCTTCCCCCAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS GCA 90 bp ATCAATCAGCCCGACATCCAGTGTGCCCACAGCATTCTGGGGGTTTaGCTGCTCATCATGCATTTCTCTGATCTCCTGGTCTGTGGACGA +
Preference number: 5 (lower is better)
Translates to: INQPDIQCAHSILGV*LLIMHFSDLLVCGR
Trigger: TCGTCCACAGACCAGGAGATCAGAGAAATGCATGATGAGCAGGCAAACCCCCAGAATGCTGTGGGCACACTGGATGTCGGGCTGATTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS GCA 90 bp ATCAGGGCCATATACTTGGCCATGGCTTGTTCCTGGTTCATCCCCTaGAGTTTCTTCCACTTGTCAATGATGCTGGTGCGAGCCGAGCAG +
Preference number: 5 (lower is better)
Translates to: IRAIYLAMACSWFIP*SFFHLSMMLVRAEQ
Trigger: CTGCTCGGCTCGCACCAGCATCATTGACAAGTGGAAGAAACTGCAGGGGATGAACCAGGAACAAGCCATGGCCAAGTATATGGCCCTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS GCA 90 bp GGAATCTGCGCCCCTCCAGCAGTGATAAACTCTATGTTGCCGAGATaGAGAATTCCCGCCAGCAACCTCAAAACTTCCCGAACTTCCTCC +
Preference number: 5 (lower is better)
Translates to: GICAPPAVINSMLPR*RIPASNLKTSRTSS
Trigger: GGAGGAAGTTCGGGAAGTTTTGAGGTTGCTGGCGGGAATTCTGCATCTCGGCAACATAGAGTTTATCACTGCTGGAGGGGCGCAGATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000110457.8
ENSMUST00000137601.8
CDS GCA 90 bp CTGACAAAGAAAGGATTTGAGGAGCTTAGTGTTGCCATTAAGGAGTaGAGGGAGTCCTTGAACTGCGAGCTGACAGTGGGCCGCCGGTGT +
Preference number: 5 (lower is better)
Translates to: LTKKGFEELSVAIKE*RESLNCELTVGRRC
Trigger: ACACCGGCGGCCCACTGTCAGCTCGCAGTTCAAGGACTCCCTGCACTCCTTAATGGCAACACTAAGCTCCTCAAATCCTTTCTTTGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110457.8
ENSMUST00000135981.8
ENSMUST00000137601.8
CDS CCA 90 bp ACACAGAGTCTCGCCGGTAGGAAAGTTCATCATCTGTATCAAACCTaGAGTCGAAGTCCTCCTCGCTGTCTTCAAAGGAGGACTGCGCCC +
Preference number: 5 (lower is better)
Translates to: TQSLAGRKVHHLYQT*SRSPPRCLQRRTAP
Trigger: GGGCGCAGTCCTCCTTTGAAGACAGCGAGGAGGACTTCGACTCCAGGTTTGATACAGATGATGAACTTTCCTACCGGCGAGACTCTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CCA 90 bp ACGTGGCAGCTAGCTTTTCAAACTTTGCCAGGACGTCAGCTACGATaGTCCGGCTTTCGATGGCCTTGTCCACCTGTCCGTTGTACTCAA +
Preference number: 5 (lower is better)
Translates to: TWQLAFQTLPGRQLR*SGFRWPCPPVRCTQ
Trigger: TTGAGTACAACGGACAGGTGGACAAGGCCATCGAAAGCCGGACCATCGTAGCTGACGTCCTGGCAAAGTTTGAAAAGCTAGCTGCCACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp GAGTGTGTGAACACATGCATGCGCGGGCAAGCACAGACAGTTGAAACAAAGCAACAGCTGTCCTCGCAGTaGCTTCTGGAACACGATGGC +
Preference number: 5 (lower is better)
Translates to: ECVNTCMRGQAQTVETKQQLSSQ*LLEHDG
Trigger: GCCATCGTGTTCCAGAAGCAACTGCGAGGACAGCTG...TTGCTTTGTTTCAACTGTCTGTGCTTGCCCGCGCATGCATGTGTTCACACACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp TCAGTAGCACAGTTAAGGTCGATTAGGGTCCACTCTGCAAGTTTAAGGCACTTCTCCCCACTCGAGGAGTaGTGCAGGCTAGCGGAGTCC +
Preference number: 5 (lower is better)
Translates to: SVAQLRSIRVHSASLRHFSPLEE*CRLAES
Trigger: GGACTCCGCTAGCCTGCACAACTCCTCGAGTGGGGA...GAAGTGCCTTAAACTTGCAGAGTGGACCCTAATCGACCTTAACTGTGCTACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp GAGTGTGTGAACACATGCATGCGCGGGCAAGCACAGACAGTTGAAACAAAGCAACCGGGATGGGGCACCTaGTTGGTCTGTTTGATGAGC +
Preference number: 5 (lower is better)
Translates to: ECVNTCMRGQAQTVETKQPGWGT*LVCLMS
Trigger: GCTCATCAAACAGACCAACAAGGTGCCCCATCCCGG...TTGCTTTGTTTCAACTGTCTGTGCTTGCCCGCGCATGCATGTGTTCACACACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp CCCTCATTTGCAGGAAATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCAGCTGTGGTGTGGGAGTaGATGGTGATCTTGCAGGAG +
Preference number: 5 (lower is better)
Translates to: PSFAGNQAGEVSAQSVDPAVVWE*MVILQE
Trigger: CTCCTGCAAGATCACCATCAACTCCCACACCACAGC...TGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGATTTCCTGCAAATGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp CCCTCATTTGCAGGAAATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCAAAGGTGTCCTGGTTGTaGCGGCTGGAGACGTGTTCA +
Preference number: 5 (lower is better)
Translates to: PSFAGNQAGEVSAQSVDPKVSWL*RLETCS
Trigger: TGAACACGTCTCCAGCCGCAACAACCAGGACACCTT...TGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGATTTCCTGCAAATGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp GAGTGTGTGAACACATGCATGCGCGGGCAAGCACAGACAGTTGAAACAAAGCAAGAGTGCAGGGAGTCCTaGAACTGCGAGCTGACAGTG +
Preference number: 5 (lower is better)
Translates to: ECVNTCMRGQAQTVETKQECRES*NCELTV
Trigger: CACTGTCAGCTCGCAGTTCAAGGACTCCCTGCACTC...TTGCTTTGTTTCAACTGTCTGTGCTTGCCCGCGCATGCATGTGTTCACACACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS GCA 90 bp CCTGCGTGCCAGCTGTCCTCGCAGTTGCTTCTGGAACACGATGGCTaGCTTTTTCAGGTGCAAAAATTTCTTCCTCGCAAGGAAAGCTCT +
Preference number: 5 (lower is better)
Translates to: PACQLSSQLLLEHDG*LFQVQKFLPRKESS
Trigger: AGAGCTTTCCTTGCGAGGAAGAAATTTTTGCACCTGAAAAAGGCAGCCATCGTGTTCCAGAAGCAACTGCGAGGACAGCTGGCACGCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
ENSMUST00000124966.8
ENSMUST00000125667.3
ENSMUST00000135173.8
ENSMUST00000135981.8
ENSMUST00000137601.8
CDS GCA 90 bp CCAAGCAAGTCCGCAGACCTACCCAAAGCTGTTTTGAAGGGAATCTaGGCCCCTCCAGCAGTGATAAACTCTATGTTGCCGAGATGCAGA +
Preference number: 5 (lower is better)
Translates to: PSKSADLPKAVLKGI*APPAVINSMLPRCR
Trigger: TCTGCATCTCGGCAACATAGAGTTTATCACTGCTGGAGGGGCGCAGATTCCCTTCAAAACAGCTTTGGGTAGGTCTGCGGACTTGCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000110457.8
ENSMUST00000137601.8
CDS GCA 90 bp ATGGCCGCACGGTCAATCTCCTCTTCCCGCCTCTTTTCCAGTTTCTaGTCCAAGGATTCTCGAAGGAAGACCTTCTGTGTGTTTGGCTTG +
Preference number: 5 (lower is better)
Translates to: MAARSISSSRLFSSF*SKDSRRKTFCVFGL
Trigger: CAAGCCAAACACACAGAAGGTCTTCCTTCGAGAATCCTTGGAGCAGAAACTGGAAAAGAGGCGGGAAGAGGAGATTGACCGTGCGGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135981.8
CDS CCA 90 bp ACGTCAGAGTTGAGGCAGTTCTCCTTAATATCTTGGATCAGCTGCTaGGTGGGCGTGTCGATTGGAGCCTTGGTGTCAGTCACATTCTGG +
Preference number: 5 (lower is better)
Translates to: TSELRQFSLISWISC*VGVSIGALVSVTFW
Trigger: CCAGAATGTGACTGACACCAAGGCTCCAATCGACACGCCCACCCAGCAGCTGATCCAAGATATTAAGGAGAACTGCCTCAACTCTGACGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CCA 90 bp GGCCACTCCTTGATCAGGGCCATATACTTGGCCATGGCTTGTTCCTaGTTCATCCCCTGCAGTTTCTTCCACTTGTCAATGATGCTGGTG +
Preference number: 5 (lower is better)
Translates to: GHSLIRAIYLAMACS*FIPCSFFHLSMMLV
Trigger: CACCAGCATCATTGACAAGTGGAAGAAACTGCAGGGGATGAACCAGGAACAAGCCATGGCCAAGTATATGGCCCTGATCAAGGAGTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CCA 90 bp ACCACGACGCCTTCTGCACAGGAATTTACAGTACTCGGAAAATGCTaGCCATTTTCTCTTAGCCAGACCCGTGCTCCCTCGGGAAAGAAG +
Preference number: 5 (lower is better)
Translates to: TTTPSAQEFTVLGKC*PFSLSQTRAPSGKK
Trigger: CTTCTTTCCCGAGGGAGCACGGGTCTGGCTAAGAGAAAATGGCCAGCATTTTCCGAGTACTGTAAATTCCTGTGCAGAAGGCGTCGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS CCA 90 bp ATTGCTTTCGTGCCAAGTAGCCTAAGATGTGAGCTCGGATCACCATaGCCGCACGGTCAATCTCCTCTTCCCGCCTCTTTTCCAGTTTCT +
Preference number: 5 (lower is better)
Translates to: IAFVPSSLRCELGSP*PHGQSPLPASFPVS
Trigger: AGAAACTGGAAAAGAGGCGGGAAGAGGAGATTGACCGTGCGGCCATGGTGATCCGAGCTCACATCTTAGGCTACTTGGCACGAAAGCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000110457.8
ENSMUST00000125667.3
ENSMUST00000135173.8
ENSMUST00000135981.8
ENSMUST00000137601.8
CDS-3UTR CAA 90 bp CCCTCATTTGCAGGAAATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCACTGCTTGTTCTCCCTTaGCTTTTCCAGCTCCCTGGT +
Preference number: 5 (lower is better)
Translates to: PSFAGNQAGEVSAQSVDPLLVLP*LFQLPG
Trigger: ACCAGGGAGCTGGAAAAGCAAAGGGAGAACAAGCAG...TGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGATTTCCTGCAAATGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp CCCTCATTTGCAGGAAATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCATCGATCTCGTCGAAGTaGAGCGACTCCAAGAACTCC +
Preference number: 5 (lower is better)
Translates to: PSFAGNQAGEVSAQSVDPSISSK*SDSKNS
Trigger: GGAGTTCTTGGAGTCGCTCAACTTCGACGAGATCGA...TGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGATTTCCTGCAAATGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp TCAGTAGCACAGTTAAGGTCGATTAGGGTCCACTCTGCAAGTTTAAGGCACTTCACCCTGGTGTCCCCCTaGGATCTCTGCAGCAGGGTT +
Preference number: 5 (lower is better)
Translates to: SVAQLRSIRVHSASLRHFTLVSP*DLCSRV
Trigger: AACCCTGCTGCAGAGATCCAAGGGGGACACCAGGGT...GAAGTGCCTTAAACTTGCAGAGTGGACCCTAATCGACCTTAACTGTGCTACTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp CCCTCATTTGCAGGAAATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCAGGGAAGCCGCCTTCTTaGCACTCCACATCAAAGAGT +
Preference number: 5 (lower is better)
Translates to: PSFAGNQAGEVSAQSVDPGKPPS*HSTSKS
Trigger: ACTCTTTGATGTGGAGTGCAAAGAAGGCGGCTTCCC...TGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGATTTCCTGCAAATGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp CCCTCATTTGCAGGAAATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCATACGCTTTCATGAGCTaGGCCACATCCACCACCTCA +
Preference number: 5 (lower is better)
Translates to: PSFAGNQAGEVSAQSVDPYAFMS*ATSTTS
Trigger: TGAGGTGGTGGATGTGGCCAAGCTCATGAAAGCGTA...TGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGATTTCCTGCAAATGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp CCCTCATTTGCAGGAAATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCACATGATTGGGCTGCTTaGAAGGATGGCTTGCTCGAC +
Preference number: 5 (lower is better)
Translates to: PSFAGNQAGEVSAQSVDPHDWAA*KDGLLD
Trigger: GTCGAGCAAGCCATCCTTCAAAGCAGCCCAATCATG...TGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGATTTCCTGCAAATGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS CCA 90 bp AAACCCTGCGTGCCAGCTGTCCTCGCAGTTGCTTCTGGAACACGATaGCTGCCTTTTTCAGGTGCAAAAATTTCTTCCTCGCAAGGAAAG +
Preference number: 5 (lower is better)
Translates to: KPCVPAVLAVASGTR*LPFSGAKISSSQGK
Trigger: CTTTCCTTGCGAGGAAGAAATTTTTGCACCTGAAAAAGGCAGCCATCGTGTTCCAGAAGCAACTGCGAGGACAGCTGGCACGCAGGGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
ENSMUST00000124966.8
ENSMUST00000125667.3
ENSMUST00000135173.8
ENSMUST00000135981.8
ENSMUST00000137601.8
CDS-3UTR CAA 90 bp CCCTCATTTGCAGGAAATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCAATCTCCTCCACCTGCTaGTTCTCCCTTTGCTTTTCC +
Preference number: 5 (lower is better)
Translates to: PSFAGNQAGEVSAQSVDPISSTC*FSLCFS
Trigger: GGAAAAGCAAAGGGAGAACAAGCAGGTGGAGGAGAT...TGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGATTTCCTGCAAATGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp TCAGTAGCACAGTTAAGGTCGATTAGGGTCCACTCTGCAAGTTTAAGGCACTTCACTTCCACGGTGCCCTaGAGCTTCTCCTCGCTATCG +
Preference number: 5 (lower is better)
Translates to: SVAQLRSIRVHSASLRHFTSTVP*SFSSLS
Trigger: CGATAGCGAGGAGAAGCTCAAGGGCACCGTGGAAGT...GAAGTGCCTTAAACTTGCAGAGTGGACCCTAATCGACCTTAACTGTGCTACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp CCCTCATTTGCAGGAAATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCACAGCATTCTGGGGGTTaGCCTGCTCATCATGCATTT +
Preference number: 5 (lower is better)
Translates to: PSFAGNQAGEVSAQSVDPQHSGG*PAHHAF
Trigger: AAATGCATGATGAGCAGGCAAACCCCCAGAATGCTG...TGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGATTTCCTGCAAATGAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp ATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCATGCCCCGCCTCCAAGCAGTTGTTGGAGAGAATaGAATATCTTGATGGCTTCG +
Preference number: 5 (lower is better)
Translates to: IRLGRLVHNQWIHAPPPSSCWRE*NILMAS
Trigger: CGAAGCCATCAAGATATTCAATTCTCTCCAACAACT...GCTTGGAGGCGGGGCATGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp GAGTGTGTGAACACATGCATGCGCGGGCAAGCACAGACAGTTGAAACAAAGCAAGCTGATGAGGACACATaGGTTGTCATGGCGCTTCCA +
Preference number: 5 (lower is better)
Translates to: ECVNTCMRGQAQTVETKQADEDT*VVMALP
Trigger: TGGAAGCGCCATGACAACCAATGTGTCCTCATCAGC...TTGCTTTGTTTCAACTGTCTGTGCTTGCCCGCGCATGCATGTGTTCACACACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp TCAGTAGCACAGTTAAGGTCGATTAGGGTCCACTCTGCAAGTTTAAGGCACTTCTCTCGAAGGAAGACCTaGGTCTTCCCCAGCTGCCAC +
Preference number: 5 (lower is better)
Translates to: SVAQLRSIRVHSASLRHFSRRKT*VFPSCH
Trigger: GTGGCAGCTGGGGAAGACCAAGGTCTTCCTTCGAGA...GAAGTGCCTTAAACTTGCAGAGTGGACCCTAATCGACCTTAACTGTGCTACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS TCA 90 bp TGCACTCCACATCAAAGAGTGTTGATCCATAACCAGGCCACTCCTTaGTCAGGGCCATATACTTGGCCATGGCTTGTTCCTGGTTCATCC +
Preference number: 5 (lower is better)
Translates to: CTPHQRVLIHNQATP*SGPYTWPWLVPGSS
Trigger: GGATGAACCAGGAACAAGCCATGGCCAAGTATATGGCCCTGATCAAGGAGTGGCCTGGTTATGGATCAACACTCTTTGATGTGGAGTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS GCA 90 bp GGTGAACACCTGCCCATAGTCTGTCTGGAAGACCACGACGCCTTCTaGACAGGAATTTACAGTACTCGGAAAATGCTGGCCATTTTCTCT +
Preference number: 5 (lower is better)
Translates to: GEHLPIVCLEDHDAF*TGIYSTRKMLAIFS
Trigger: AGAGAAAATGGCCAGCATTTTCCGAGTACTGTAAATTCCTGTGCAGAAGGCGTCGTGGTCTTCCAGACAGACTATGGGCAGGTGTTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp GAGTGTGTGAACACATGCATGCGCGGGCAAGCACAGACAGTTGAAACAAAGCAAGTTCTCCTTAATATCTaGGATCAGCTGCTGGGTGGG +
Preference number: 5 (lower is better)
Translates to: ECVNTCMRGQAQTVETKQVLLNI*DQLLGG
Trigger: CCCACCCAGCAGCTGATCCAAGATATTAAGGAGAAC...TTGCTTTGTTTCAACTGTCTGTGCTTGCCCGCGCATGCATGTGTTCACACACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp GAGTGTGTGAACACATGCATGCGCGGGCAAGCACAGACAGTTGAAACAAAGCAAGCTGTCACCTTCTGGTaGGTGATTGTACTCTGCTTG +
Preference number: 5 (lower is better)
Translates to: ECVNTCMRGQAQTVETKQAVTFW*VIVLCL
Trigger: CAAGCAGAGTACAATCACCAACCAGAAGGTGACAGC...TTGCTTTGTTTCAACTGTCTGTGCTTGCCCGCGCATGCATGTGTTCACACACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp GAGTGTGTGAACACATGCATGCGCGGGCAAGCACAGACAGTTGAAACAAAGCAAAAATGGCTCTCTTCATaGATCAAGGCGAGGAGGCCA +
Preference number: 5 (lower is better)
Translates to: ECVNTCMRGQAQTVETKQKWLSS*IKARRP
Trigger: TGGCCTCCTCGCCTTGATCAATGAAGAGAGCCATTT...TTGCTTTGTTTCAACTGTCTGTGCTTGCCCGCGCATGCATGTGTTCACACACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp GAGTGTGTGAACACATGCATGCGCGGGCAAGCACAGACAGTTGAAACAAAGCAATTGAGGAGCTTAGTGTaGCCATTAAGGAGTGCAGGG +
Preference number: 5 (lower is better)
Translates to: ECVNTCMRGQAQTVETKQLRSLV*PLRSAG
Trigger: CCCTGCACTCCTTAATGGCAACACTAAGCTCCTCAA...TTGCTTTGTTTCAACTGTCTGTGCTTGCCCGCGCATGCATGTGTTCACACACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS TCA 90 bp CCAACAAAGTGCTGTCTGTGGCTTGAGGAAAATGGCTCTCTTCATTaGTCAAGGCGAGGAGGCCAAGTTTCTTCTCGATCAGGTCTAGAC +
Preference number: 5 (lower is better)
Translates to: PTKCCLWLEENGSLH*SRRGGQVSSRSGLD
Trigger: GTCTAGACCTGATCGAGAAGAAACTTGGCCTCCTCGCCTTGATCAATGAAGAGAGCCATTTTCCTCAAGCCACAGACAGCACTTTGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000110457.8
ENSMUST00000137601.8
CDS-3UTR CAA 90 bp TCAGTAGCACAGTTAAGGTCGATTAGGGTCCACTCTGCAAGTTTAAGGCACTTCTCGATCTCGTCGAAGTaGAGCGACTCCAAGAACTCC +
Preference number: 5 (lower is better)
Translates to: SVAQLRSIRVHSASLRHFSISSK*SDSKNS
Trigger: GGAGTTCTTGGAGTCGCTCAACTTCGACGAGATCGA...GAAGTGCCTTAAACTTGCAGAGTGGACCCTAATCGACCTTAACTGTGCTACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp TGGTTTATAAATACAGTTATCTCTCTGGGCTGTAGACCTGTTAGTAATACAGCAGGGTTGGGCGAGTCCTaGAAGGCGTCGTCATCCGCC +
Preference number: 5 (lower is better)
Translates to: WFINTVISLGCRPVSNTAGLGES*KASSSA
Trigger: GGCGGATGACGACGCCTTCAAGGACTCGCCCAACCC...TGCTGTATTACTAACAGGTCTACAGCCCAGAGAGATAACTGTATTTATAAACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp GAGTGTGTGAACACATGCATGCGCGGGCAAGCACAGACAGTTGAAACAAAGCAATGCAGTTTCTTCCACTaGTCAATGATGCTGGTGCGA +
Preference number: 5 (lower is better)
Translates to: ECVNTCMRGQAQTVETKQCSFFH*SMMLVR
Trigger: TCGCACCAGCATCATTGACAAGTGGAAGAAACTGCA...TTGCTTTGTTTCAACTGTCTGTGCTTGCCCGCGCATGCATGTGTTCACACACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp TCAGTAGCACAGTTAAGGTCGATTAGGGTCCACTCTGCAAGTTTAAGGCACTTCTACGCTTTCATGAGCTaGGCCACATCCACCACCTCA +
Preference number: 5 (lower is better)
Translates to: SVAQLRSIRVHSASLRHFYAFMS*ATSTTS
Trigger: TGAGGTGGTGGATGTGGCCAAGCTCATGAAAGCGTA...GAAGTGCCTTAAACTTGCAGAGTGGACCCTAATCGACCTTAACTGTGCTACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp CCCTCATTTGCAGGAAATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCAAAGCGACTGGAGTTGTaGTTGTATACTGTCTTCGCA +
Preference number: 5 (lower is better)
Translates to: PSFAGNQAGEVSAQSVDPKRLEL*LYTVFA
Trigger: TGCGAAGACAGTATACAACAACAACTCCAGTCGCTT...TGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGATTTCCTGCAAATGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp GAGTGTGTGAACACATGCATGCGCGGGCAAGCACAGACAGTTGAAACAAAGCAAGATTTGAAGTCGTCTTaGCCTTTGATCCGGCTGTTG +
Preference number: 5 (lower is better)
Translates to: ECVNTCMRGQAQTVETKQDLKSS*PLIRLL
Trigger: CAACAGCCGGATCAAAGGCAAAGACGACTTCAAATC...TTGCTTTGTTTCAACTGTCTGTGCTTGCCCGCGCATGCATGTGTTCACACACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp TGGTTTATAAATACAGTTATCTCTCTGGGCTGTAGACCTGTTAGTAATACAGCAAGGGAGCGCTCGATGTaGCGGACGCACTCGTCGATC +
Preference number: 5 (lower is better)
Translates to: WFINTVISLGCRPVSNTARERSM*RTHSSI
Trigger: GATCGACGAGTGCGTCCGCAACATCGAGCGCTCCCT...TGCTGTATTACTAACAGGTCTACAGCCCAGAGAGATAACTGTATTTATAAACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp CGACATGGTTATATCTGCAATCTAGCCAGAGTGATAACACAAGTTACCCTTCAACTTGTGCAGCCAGCCTaGCTTGAGGGCTTCCTGCTT +
Preference number: 5 (lower is better)
Translates to: RHGYICNLARVITQVTLQLVQPA*LEGFLL
Trigger: AAGCAGGAAGCCCTCAAGCAAGGCTGGCTGCACAAG...TTGAAGGGTAACTTGTGTTATCACTCTGGCTAGATTGCAGATATAACCATGTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp TGGTTTATAAATACAGTTATCTCTCTGGGCTGTAGACCTGTTAGTAATACAGCAGAGCCCCCGCCTTTCTaGTGCAGCCAGCCTTGCTTG +
Preference number: 5 (lower is better)
Translates to: WFINTVISLGCRPVSNTAEPPPF*CSQPCL
Trigger: CAAGCAAGGCTGGCTGCACAAGAAAGGCGGGGGCTC...TGCTGTATTACTAACAGGTCTACAGCCCAGAGAGATAACTGTATTTATAAACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp CGACATGGTTATATCTGCAATCTAGCCAGAGTGATAACACAAGTTACCCTTCAATGGAACTTGAGGTATTaGAGGATCCCGCGGCTCGGC +
Preference number: 5 (lower is better)
Translates to: RHGYICNLARVITQVTLQWNLRY*RIPRLG
Trigger: GCCGAGCCGCGGGATCCTCAAATACCTCAAGTTCCA...TTGAAGGGTAACTTGTGTTATCACTCTGGCTAGATTGCAGATATAACCATGTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp TGGTTTATAAATACAGTTATCTCTCTGGGCTGTAGACCTGTTAGTAATACAGCAGGGTGGGCGTGTCGATaGGAGCCTTGGTGTCAGTCA +
Preference number: 5 (lower is better)
Translates to: WFINTVISLGCRPVSNTAGWACR*EPWCQS
Trigger: TGACTGACACCAAGGCTCCAATCGACACGCCCACCC...TGCTGTATTACTAACAGGTCTACAGCCCAGAGAGATAACTGTATTTATAAACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp TCAGTAGCACAGTTAAGGTCGATTAGGGTCCACTCTGCAAGTTTAAGGCACTTCTCCACCACGTCAGAGTaGAGGCAGTTCTCCTTAATA +
Preference number: 5 (lower is better)
Translates to: SVAQLRSIRVHSASLRHFSTTSE*RQFSLI
Trigger: TATTAAGGAGAACTGCCTCAACTCTGACGTGGTGGA...GAAGTGCCTTAAACTTGCAGAGTGGACCCTAATCGACCTTAACTGTGCTACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp CCCTCATTTGCAGGAAATCAGGCTGGGGAGGTTAGTGCACAATCAGTGGATCCACATGGACTCCAGTTGTaGGAGAGAATTGAATATCTT +
Preference number: 5 (lower is better)
Translates to: PSFAGNQAGEVSAQSVDPHGLQL*ERIEYL
Trigger: AAGATATTCAATTCTCTCCAACAACTGGAGTCCATG...TGGATCCACTGATTGTGCACTAACCTCCCCAGCCTGATTTCCTGCAAATGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp GAGTGTGTGAACACATGCATGCGCGGGCAAGCACAGACAGTTGAAACAAAGCAAGGACATGGACTCCAGTaGTTGGAGAGAATTGAATAT +
Preference number: 5 (lower is better)
Translates to: ECVNTCMRGQAQTVETKQGHGLQ*LERIEY
Trigger: ATATTCAATTCTCTCCAACAACTGGAGTCCATGTCC...TTGCTTTGTTTCAACTGTCTGTGCTTGCCCGCGCATGCATGTGTTCACACACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CCA 90 bp TTCGTGGGCCTGTTCAAACATAAACGCAAACTCCACGCTGTCTTTTaGCATGCTGTCGGTGTCCAGGAAGCAATAAAGTTTGAAGTAGAA +
Preference number: 5 (lower is better)
Translates to: FVGLFKHKRKLHAVF*HAVGVQEAIKFEVE
Trigger: TTCTACTTCAAACTTTATTGCTTCCTGGACACCGACAGCATGCCAAAAGACAGCGTGGAGTTTGCGTTTATGTTTGAACAGGCCCACGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp TGGTTTATAAATACAGTTATCTCTCTGGGCTGTAGACCTGTTAGTAATACAGCAGTTCTTGCTGCCTCCTaGTCTCTGCCTCCTGATGGG +
Preference number: 5 (lower is better)
Translates to: WFINTVISLGCRPVSNTAVLAAS*SLPPDG
Trigger: CCCATCAGGAGGCAGAGACAAGGAGGCAGCAAGAAC...TGCTGTATTACTAACAGGTCTACAGCCCAGAGAGATAACTGTATTTATAAACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp TGGTTTATAAATACAGTTATCTCTCTGGGCTGTAGACCTGTTAGTAATACAGCAACTTCCACGGTGCCCTaGAGCTTCTCCTCGCTATCG +
Preference number: 5 (lower is better)
Translates to: WFINTVISLGCRPVSNTATSTVP*SFSSLS
Trigger: CGATAGCGAGGAGAAGCTCAAGGGCACCGTGGAAGT...TGCTGTATTACTAACAGGTCTACAGCCCAGAGAGATAACTGTATTTATAAACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp CGACATGGTTATATCTGCAATCTAGCCAGAGTGATAACACAAGTTACCCTTCAACAGTGCAGCACCCGGTaGGCTGTGATGATCACAAAT +
Preference number: 5 (lower is better)
Translates to: RHGYICNLARVITQVTLQQCSTR*AVMITN
Trigger: ATTTGTGATCATCACAGCCAACCGGGTGCTGCACTG...TTGAAGGGTAACTTGTGTTATCACTCTGGCTAGATTGCAGATATAACCATGTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp CGACATGGTTATATCTGCAATCTAGCCAGAGTGATAACACAAGTTACCCTTCAAATACTTGGCCATGGCTaGTTCCTGGTTCATCCCCTG +
Preference number: 5 (lower is better)
Translates to: RHGYICNLARVITQVTLQILGHG*FLVHPL
Trigger: CAGGGGATGAACCAGGAACAAGCCATGGCCAAGTAT...TTGAAGGGTAACTTGTGTTATCACTCTGGCTAGATTGCAGATATAACCATGTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp CGACATGGTTATATCTGCAATCTAGCCAGAGTGATAACACAAGTTACCCTTCAATCCCGAACTTCCTCCTaGCTGAATTGCATGACTTCC +
Preference number: 5 (lower is better)
Translates to: RHGYICNLARVITQVTLQSRTSS*LNCMTS
Trigger: GGAAGTCATGCAATTCAGCAAGGAGGAAGTTCGGGA...TTGAAGGGTAACTTGTGTTATCACTCTGGCTAGATTGCAGATATAACCATGTCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp CGACATGGTTATATCTGCAATCTAGCCAGAGTGATAACACAAGTTACCCTTCAACCTTTGATCCGGCTGTaGATCTTCTTGATCACCCAC +
Preference number: 5 (lower is better)
Translates to: RHGYICNLARVITQVTLQPLIRL*IFLITH
Trigger: GTGGGTGATCAAGAAGATCAACAGCCGGATCAAAGG...TTGAAGGGTAACTTGTGTTATCACTCTGGCTAGATTGCAGATATAACCATGTCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS CCA 90 bp GCAAAAATTTCTTCCTCGCAAGGAAAGCTCTGTAATTCTTCTGTATaGTCACCACACCACAGAGGACCTTTCTATATTGCTTTCGTGCCA +
Preference number: 5 (lower is better)
Translates to: AKISSSQGKLCNSSV*SPHHRGPFYIAFVP
Trigger: TGGCACGAAAGCAATATAGAAAGGTCCTCTGTGGTGTGGTGACCATACAGAAGAATTACAGAGCTTTCCTTGCGAGGAAGAAATTTTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
ENSMUST00000124966.8
ENSMUST00000125667.3
ENSMUST00000135173.8
ENSMUST00000135981.8
ENSMUST00000137601.8
CDS-3UTR CAA 90 bp TGGTTTATAAATACAGTTATCTCTCTGGGCTGTAGACCTGTTAGTAATACAGCAGTGTCGATTGGAGCCTaGGTGTCAGTCACATTCTGG +
Preference number: 5 (lower is better)
Translates to: WFINTVISLGCRPVSNTAVSIGA*VSVTFW
Trigger: CCAGAATGTGACTGACACCAAGGCTCCAATCGACAC...TGCTGTATTACTAACAGGTCTACAGCCCAGAGAGATAACTGTATTTATAAACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp CGACATGGTTATATCTGCAATCTAGCCAGAGTGATAACACAAGTTACCCTTCAATCCACCACGTCAGAGTaGAGGCAGTTCTCCTTAATA +
Preference number: 5 (lower is better)
Translates to: RHGYICNLARVITQVTLQSTTSE*RQFSLI
Trigger: TATTAAGGAGAACTGCCTCAACTCTGACGTGGTGGA...TTGAAGGGTAACTTGTGTTATCACTCTGGCTAGATTGCAGATATAACCATGTCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp TCAGTAGCACAGTTAAGGTCGATTAGGGTCCACTCTGCAAGTTTAAGGCACTTCACAAACTCTCTGCATTaGGTTTTCTTAAGGGATTCG +
Preference number: 5 (lower is better)
Translates to: SVAQLRSIRVHSASLRHFTNSLH*VFLRDS
Trigger: CGAATCCCTTAAGAAAACCAAATGCAGAGAGTTTGT...GAAGTGCCTTAAACTTGCAGAGTGGACCCTAATCGACCTTAACTGTGCTACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp CGACATGGTTATATCTGCAATCTAGCCAGAGTGATAACACAAGTTACCCTTCAATGCAGTTTCTTCCACTaGTCAATGATGCTGGTGCGA +
Preference number: 5 (lower is better)
Translates to: RHGYICNLARVITQVTLQCSFFH*SMMLVR
Trigger: TCGCACCAGCATCATTGACAAGTGGAAGAAACTGCA...TTGAAGGGTAACTTGTGTTATCACTCTGGCTAGATTGCAGATATAACCATGTCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp TGGTTTATAAATACAGTTATCTCTCTGGGCTGTAGACCTGTTAGTAATACAGCAGGGAAGCCGCCTTCTTaGCACTCCACATCAAAGAGT +
Preference number: 5 (lower is better)
Translates to: WFINTVISLGCRPVSNTAGKPPS*HSTSKS
Trigger: ACTCTTTGATGTGGAGTGCAAAGAAGGCGGCTTCCC...TGCTGTATTACTAACAGGTCTACAGCCCAGAGAGATAACTGTATTTATAAACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp TGGTTTATAAATACAGTTATCTCTCTGGGCTGTAGACCTGTTAGTAATACAGCAATGACGGACAGGAACTaGAGGATCAGCTTGGTGCTT +
Preference number: 5 (lower is better)
Translates to: WFINTVISLGCRPVSNTAMTDRN*RISLVL
Trigger: AAGCACCAAGCTGATCCTCAAGTTCCTGTCCGTCAT...TGCTGTATTACTAACAGGTCTACAGCCCAGAGAGATAACTGTATTTATAAACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp TGGTTTATAAATACAGTTATCTCTCTGGGCTGTAGACCTGTTAGTAATACAGCACTTTTCAGGTGGAACTaGAGGTATTTGAGGATCCCG +
Preference number: 5 (lower is better)
Translates to: WFINTVISLGCRPVSNTALFRWN*RYLRIP
Trigger: CGGGATCCTCAAATACCTCAAGTTCCACCTGAAAAG...TGCTGTATTACTAACAGGTCTACAGCCCAGAGAGATAACTGTATTTATAAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp TGGTTTATAAATACAGTTATCTCTCTGGGCTGTAGACCTGTTAGTAATACAGCATTCTCTTTGCTTGTGTaGTCTATGATCTCCTTGGCG +
Preference number: 5 (lower is better)
Translates to: WFINTVISLGCRPVSNTAFSLLV*SMISLA
Trigger: CGCCAAGGAGATCATAGACAACACAAGCAAAGAGAA...TGCTGTATTACTAACAGGTCTACAGCCCAGAGAGATAACTGTATTTATAAACCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp CGACATGGTTATATCTGCAATCTAGCCAGAGTGATAACACAAGTTACCCTTCAATTCTGTGTGTTTGGCTaGATGCATCTGACAAAGAAA +
Preference number: 5 (lower is better)
Translates to: RHGYICNLARVITQVTLQFCVFG*MHLTKK
Trigger: TTTCTTTGTCAGATGCATCAAGCCAAACACACAGAA...TTGAAGGGTAACTTGTGTTATCACTCTGGCTAGATTGCAGATATAACCATGTCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp TGGTTTATAAATACAGTTATCTCTCTGGGCTGTAGACCTGTTAGTAATACAGCAGATGTAGGTATAGATTaGGTTCCTTTTGTAGCGCTG +
Preference number: 5 (lower is better)
Translates to: WFINTVISLGCRPVSNTADVGID*VPFVAL
Trigger: CAGCGCTACAAAAGGAACCAAATCTATACCTACATC...TGCTGTATTACTAACAGGTCTACAGCCCAGAGAGATAACTGTATTTATAAACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp TGGTTTATAAATACAGTTATCTCTCTGGGCTGTAGACCTGTTAGTAATACAGCAAGTTGTTGGAGAGAATaGAATATCTTGATGGCTTCG +
Preference number: 5 (lower is better)
Translates to: WFINTVISLGCRPVSNTASCWRE*NILMAS
Trigger: CGAAGCCATCAAGATATTCAATTCTCTCCAACAACT...TGCTGTATTACTAACAGGTCTACAGCCCAGAGAGATAACTGTATTTATAAACCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS-3UTR CAA 90 bp TGGTTTATAAATACAGTTATCTCTCTGGGCTGTAGACCTGTTAGTAATACAGCACATGGACTCCAGTTGTaGGAGAGAATTGAATATCTT +
Preference number: 5 (lower is better)
Translates to: WFINTVISLGCRPVSNTAHGLQL*ERIEYL
Trigger: AAGATATTCAATTCTCTCCAACAACTGGAGTCCATG...TGCTGTATTACTAACAGGTCTACAGCCCAGAGAGATAACTGTATTTATAAACCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS GCA 72 bp GAACCACCGACCCGGTCCGGAAGCTCCGCCGCAGCGTaGCCTCCAGGAAGCTGGTCCGTCTCTTCTCGAGGC +
Preference number: 6 (lower is better)
Translates to: EPPTRSGSSAAA*PPGSWSVSSRG
Trigger: GCCTCGAGAAGAGACGGACCAGCTTCCTGGAGGGCACGCTGCGGCGGAGCTTCCGGACCGGGTCGGTGGTTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CAA 90 bp GTTCGCTGGTCGGAGTGGCCGTGCTCGCTGGGGTTGGGCGAGTCCTaGAAGGCGTCGTCATCCGCCTCGAAGCCCTCGTCCACCTCCTCC +
Preference number: 6 (lower is better)
Translates to: VRWSEWPCSLGLGES*KASSSASKPSSTSS
Trigger: GGAGGAGGTGGACGAGGGCTTCGAGGCGGATGACGACGCCTTCAAGGACTCGCCCAACCCCAGCGAGCACGGCCACTCCGACCAGCGAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CAA 90 bp CGGATGCCACTCGTTCGCTGGTCGGAGTGGCCGTGCTCGCTGGGGTaGGGCGAGTCCTTGAAGGCGTCGTCATCCGCCTCGAAGCCCTCG +
Preference number: 6 (lower is better)
Translates to: RMPLVRWSEWPCSLG*GESLKASSSASKPS
Trigger: CGAGGGCTTCGAGGCGGATGACGACGCCTTCAAGGACTCGCCCAACCCCAGCGAGCACGGCCACTCCGACCAGCGAACGAGTGGCATCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS GCA 72 bp GTCCGGATGCCACTCGTTCGCTGGTCGGAGTGGCCGTaGTCGCTGGGGTTGGGCGAGTCCTTGAAGGCGTCG +
Preference number: 6 (lower is better)
Translates to: VRMPLVRWSEWP*SLGLGESLKAS
Trigger: CGACGCCTTCAAGGACTCGCCCAACCCCAGCGAGCACGGCCACTCCGACCAGCGAACGAGTGGCATCCGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CCA 72 bp GATGAGTCGTCGCTCGTCCGGATGCCACTCGTTCGCTaGTCGGAGTGGCCGTGCTCGCTGGGGTTGGGCGAG +
Preference number: 6 (lower is better)
Translates to: DESSLVRMPLVR*SEWPCSLGLGE
Trigger: CTCGCCCAACCCCAGCGAGCACGGCCACTCCGACCAGCGAACGAGTGGCATCCGGACGAGCGACGACTCATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CCA 72 bp GCTCGCCCAGGTGGCACCTGCTGTACTCCTCCATGGTaGCGCGCTCGTACAGGCCAGCGATGGGCTGGTAGG +
Preference number: 6 (lower is better)
Translates to: ARPGGTCCTPPW*RARTGQRWAGR
Trigger: CCTACCAGCCCATCGCTGGCCTGTACGAGCGCGCCACCATGGAGGAGTACAGCAGGTGCCACCTGGGCGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000110457.8
ENSMUST00000137601.8
CDS CAA 72 bp TCGGAGTGGCCGTGCTCGCTGGGGTTGGGCGAGTCCTaGAAGGCGTCGTCATCCGCCTCGAAGCCCTCGTCC +
Preference number: 6 (lower is better)
Translates to: SEWPCSLGLGES*KASSSASKPSS
Trigger: GGACGAGGGCTTCGAGGCGGATGACGACGCCTTCAAGGACTCGCCCAACCCCAGCGAGCACGGCCACTCCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CAA 72 bp CTCGTTCGCTGGTCGGAGTGGCCGTGCTCGCTGGGGTaGGGCGAGTCCTTGAAGGCGTCGTCATCCGCCTCG +
Preference number: 6 (lower is better)
Translates to: LVRWSEWPCSLG*GESLKASSSAS
Trigger: CGAGGCGGATGACGACGCCTTCAAGGACTCGCCCAACCCCAGCGAGCACGGCCACTCCGACCAGCGAACGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS TCA 72 bp CCTCTCCACGCTTGTAGACAGACACGGCGTCTGCGCTaGCGCCCAGCCAGAGCTCCTGGGGGAAGCCGCCTT +
Preference number: 6 (lower is better)
Translates to: PLHACRQTRRLR*RPARAPGGSRL
Trigger: AAGGCGGCTTCCCCCAGGAGCTCTGGCTGGGCGTCAGCGCAGACGCCGTGTCTGTCTACAAGCGTGGAGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS GCA 72 bp AAGGGTCCTCCTCGGATGAGTCGTCGCTCGTCCGGATaGCACTCGTTCGCTGGTCGGAGTGGCCGTGCTCGC +
Preference number: 6 (lower is better)
Translates to: KGPPRMSRRSSG*HSFAGRSGRAR
Trigger: GCGAGCACGGCCACTCCGACCAGCGAACGAGTGGCATCCGGACGAGCGACGACTCATCCGAGGAGGACCCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CCA 72 bp CAGGGCAGCCAGCACTTGGAGGCTTTCCTCAGGGGCTaGGTGGTGGCCATGGATGACGGCTTCGTGGGCCTG +
Preference number: 6 (lower is better)
Translates to: QGSQHLEAFLRG*VVAMDDGFVGL
Trigger: CAGGCCCACGAAGCCGTCATCCATGGCCACCACCCAGCCCCTGAGGAAAGCCTCCAAGTGCTGGCTGCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CCA 72 bp GAAGCTCGCCCAGGTGGCACCTGCTGTACTCCTCCATaGTGGCGCGCTCGTACAGGCCAGCGATGGGCTGGT +
Preference number: 6 (lower is better)
Translates to: EARPGGTCCTPP*WRARTGQRWAG
Trigger: ACCAGCCCATCGCTGGCCTGTACGAGCGCGCCACCATGGAGGAGTACAGCAGGTGCCACCTGGGCGAGCTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000110457.8
ENSMUST00000137601.8
CDS GCA 72 bp CGTCGGGGGAGGGCAGGTCGCCGTTGTTCTGCGGCATaGAGTAGGTGGACTCCCCACTCGAGGAGTTGTGCA +
Preference number: 6 (lower is better)
Translates to: RRGRAGRRCSAA*SRWTPHSRSCA
Trigger: TGCACAACTCCTCGAGTGGGGAGTCCACCTACTGCATGCCGCAGAACAACGGCGACCTGCCCTCCCCCGACG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS GCA 72 bp AGTTCATCCCGCAGAGGCCGCAGGTCGTGCCCGGTCTaGAGGATGCCCTGGATGATAGGGATGGGGTCGGAC +
Preference number: 6 (lower is better)
Translates to: SSSRRGRRSCPV*RMPWMIGMGSD
Trigger: GTCCGACCCCATCCCTATCATCCAGGGCATCCTGCAGACCGGGCACGACCTGCGGCCTCTGCGGGATGAACT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS GCA 72 bp TTTGCCCTCTCCACGCTTGTAGACAGACACGGCGTCTaGGCTGACGCCCAGCCAGAGCTCCTGGGGGAAGCC +
Preference number: 6 (lower is better)
Translates to: FALSTLVDRHGV*ADAQPELLGEA
Trigger: GGCTTCCCCCAGGAGCTCTGGCTGGGCGTCAGCGCAGACGCCGTGTCTGTCTACAAGCGTGGAGAGGGCAAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS GCA 72 bp CGAAGATGTGCGGTGGAAGCTCGCCCAGGTGGCACCTaGTGTACTCCTCCATGGTGGCGCGCTCGTACAGGC +
Preference number: 6 (lower is better)
Translates to: RRCAVEARPGGT*CTPPWWRARTG
Trigger: GCCTGTACGAGCGCGCCACCATGGAGGAGTACAGCAGGTGCCACCTGGGCGAGCTTCCACCGCACATCTTCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000110457.8
ENSMUST00000137601.8
CDS CCA 72 bp TCGATCTCGTCGAAGTTGAGCGACTCCAAGAACTCCTaGGCGGCGCGGCAGGCCTCATCCTCCAGCCTGCGC +
Preference number: 6 (lower is better)
Translates to: SISSKLSDSKNS*AARQASSSSLR
Trigger: GCGCAGGCTGGAGGATGAGGCCTGCCGCGCCGCCCAGGAGTTCTTGGAGTCGCTCAACTTCGACGAGATCGA
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CCA 72 bp GCAATGGCGAAGATGTGCGGTGGAAGCTCGCCCAGGTaGCACCTGCTGTACTCCTCCATGGTGGCGCGCTCG +
Preference number: 6 (lower is better)
Translates to: AMAKMCGGSSPR*HLLYSSMVARS
Trigger: CGAGCGCGCCACCATGGAGGAGTACAGCAGGTGCCACCTGGGCGAGCTTCCACCGCACATCTTCGCCATTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000110457.8
ENSMUST00000137601.8
CDS CAA 90 bp AGGGAGCGCTCGATGTTGCGGACGCACTCGTCGATCTCGTCGAAGTaGAGCGACTCCAAGAACTCCTGGGCGGCGCGGCAGGCCTCATCC +
Preference number: 6 (lower is better)
Translates to: RERSMLRTHSSISSK*SDSKNSWAARQASS
Trigger: GGATGAGGCCTGCCGCGCCGCCCAGGAGTTCTTGGAGTCGCTCAACTTCGACGAGATCGACGAGTGCGTCCGCAACATCGAGCGCTCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CAA 90 bp CCGGGACAGCGTGGAGGAGCCCCCGCCTTTCTTGTGCAGCCAGCCTaGCTTGAGGGCTTCCTGCTTGGAGCGGAACCACAGGAAGGTCTC +
Preference number: 6 (lower is better)
Translates to: PGQRGGAPAFLVQPA*LEGFLLGAEPQEGL
Trigger: GAGACCTTCCTGTGGTTCCGCTCCAAGCAGGAAGCCCTCAAGCAAGGCTGGCTGCACAAGAAAGGCGGGGGCTCCTCCACGCTGTCCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS TCA 72 bp CGATGTTGCGGACGCACTCGTCGATCTCGTCGAAGTTaGGCGACTCCAAGAACTCCTGGGCGGCGCGGCAGG +
Preference number: 6 (lower is better)
Translates to: RCCGRTRRSRRS*ATPRTPGRRGR
Trigger: CCTGCCGCGCCGCCCAGGAGTTCTTGGAGTCGCTCAACTTCGACGAGATCGACGAGTGCGTCCGCAACATCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS GCA 72 bp TCGGCCAGGGAAGCCATGTCGTCCACGCCCTCCTCGTaGAGGGGGTGCATAGCTGTCACCTTCTGGTTGGTG +
Preference number: 6 (lower is better)
Translates to: SAREAMSSTPSS*RGCIAVTFWLV
Trigger: CACCAACCAGAAGGTGACAGCTATGCACCCCCTGCACGAGGAGGGCGTGGACGACATGGCTTCCCTGGCCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000110457.8
ENSMUST00000137601.8
CDS CCA 72 bp GACACGGCGTCTGCGCTGACGCCCAGCCAGAGCTCCTaGGGGAAGCCGCCTTCTTTGCACTCCACATCAAAG +
Preference number: 6 (lower is better)
Translates to: DTASALTPSQSS*GKPPSLHSTSK
Trigger: CTTTGATGTGGAGTGCAAAGAAGGCGGCTTCCCCCAGGAGCTCTGGCTGGGCGTCAGCGCAGACGCCGTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CAA 72 bp CGTGGAGGAGCCCCCGCCTTTCTTGTGCAGCCAGCCTaGCTTGAGGGCTTCCTGCTTGGAGCGGAACCACAG +
Preference number: 6 (lower is better)
Translates to: RGGAPAFLVQPA*LEGFLLGAEPQ
Trigger: CTGTGGTTCCGCTCCAAGCAGGAAGCCCTCAAGCAAGGCTGGCTGCACAAGAAAGGCGGGGGCTCCTCCACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CAA 90 bp GACAGCGTGGAGGAGCCCCCGCCTTTCTTGTGCAGCCAGCCTTGCTaGAGGGCTTCCTGCTTGGAGCGGAACCACAGGAAGGTCTCGTCC +
Preference number: 6 (lower is better)
Translates to: DSVEEPPPFLCSQPC*RASCLERNHRKVSS
Trigger: GGACGAGACCTTCCTGTGGTTCCGCTCCAAGCAGGAAGCCCTCAAGCAAGGCTGGCTGCACAAGAAAGGCGGGGGCTCCTCCACGCTGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS TCA 72 bp AGGAGCCCCCGCCTTTCTTGTGCAGCCAGCCTTGCTTaGGGGCTTCCTGCTTGGAGCGGAACCACAGGAAGG +
Preference number: 6 (lower is better)
Translates to: RSPRLSCAASLA*GLPAWSGTTGR
Trigger: CCTTCCTGTGGTTCCGCTCCAAGCAGGAAGCCCTCAAGCAAGGCTGGCTGCACAAGAAAGGCGGGGGCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS TCA 72 bp CCTGGTCTGTGGACGAGTGGACCTGACTCAGCACGCTaGACCATTGGCTGGCATCTTCGGGGGACTCCGCGA +
Preference number: 6 (lower is better)
Translates to: PGLWTSGPDSAR*TIGWHLRGTPR
Trigger: TCGCGGAGTCCCCCGAAGATGCCAGCCAATGGTTCAGCGTGCTGAGTCAGGTCCACTCGTCCACAGACCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CCA 72 bp CGGATCAGCTTCTCCACCACCTCCCCGGCTGTGGTGTaGGAGTTGATGGTGATCTTGCAGGAGCCTCCGCCA +
Preference number: 6 (lower is better)
Translates to: RISFSTTSPAVV*ELMVILQEPPP
Trigger: TGGCGGAGGCTCCTGCAAGATCACCATCAACTCCCACACCACAGCCGGGGAGGTGGTGGAGAAGCTGATCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CAA 72 bp TCGATGTTGCGGACGCACTCGTCGATCTCGTCGAAGTaGAGCGACTCCAAGAACTCCTGGGCGGCGCGGCAG +
Preference number: 6 (lower is better)
Translates to: SMLRTHSSISSK*SDSKNSWAARQ
Trigger: CTGCCGCGCCGCCCAGGAGTTCTTGGAGTCGCTCAACTTCGACGAGATCGACGAGTGCGTCCGCAACATCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CAA 72 bp GAGGAGCCCCCGCCTTTCTTGTGCAGCCAGCCTTGCTaGAGGGCTTCCTGCTTGGAGCGGAACCACAGGAAG +
Preference number: 6 (lower is better)
Translates to: EEPPPFLCSQPC*RASCLERNHRK
Trigger: CTTCCTGTGGTTCCGCTCCAAGCAGGAAGCCCTCAAGCAAGGCTGGCTGCACAAGAAAGGCGGGGGCTCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CAA 90 bp CACCCTCTGACGATGAACTCCTGGCCCTCCACCCTGGTGTCCCCCTaGGATCTCTGCAGCAGGGTTATCCAGTGGTGCATCTCCTCTGGG +
Preference number: 6 (lower is better)
Translates to: HPLTMNSWPSTLVSP*DLCSRVIQWCISSG
Trigger: CCCAGAGGAGATGCACCACTGGATAACCCTGCTGCAGAGATCCAAGGGGGACACCAGGGTGGAGGGCCAGGAGTTCATCGTCAGAGGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS GCA 72 bp AGCTTCTGCAGGGAGGCCTCGGTCAACGACAGCTCCTaGCGCTCCTTCATGCGCTGCAGATCCTCGATTTCC +
Preference number: 6 (lower is better)
Translates to: SFCREASVNDSS*RSFMRCRSSIS
Trigger: GGAAATCGAGGATCTGCAGCGCATGAAGGAGCGGCAGGAGCTGTCGTTGACCGAGGCCTCCCTGCAGAAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
ENSMUST00000135981.8
CDS GCA 72 bp TCCCCACTCGAGGAGTTGTGCAGGCTAGCGGAGTCCTaGATGGACGCAGCAAGAAGCACCGTACTGTCGGCA +
Preference number: 6 (lower is better)
Translates to: SPLEELCRLAES*MDAARSTVLSA
Trigger: TGCCGACAGTACGGTGCTTCTTGCTGCGTCCATGCAGGACTCCGCTAGCCTGCACAACTCCTCGAGTGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CCA 72 bp CTCCTCCGCGGGGTAGGGCTGGCTGAAGTTGAAGTTTaGCTTCTCTCCGCTGGCACTCTCGGCAAGCTCACT +
Preference number: 6 (lower is better)
Translates to: LLRGVGLAEVEV*LLSAGTLGKLT
Trigger: AGTGAGCTTGCCGAGAGTGCCAGCGGAGAGAAGCCAAACTTCAACTTCAGCCAGCCCTACCCCGCGGAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CCA 72 bp CATTGGCTGGCATCTTCGGGGGACTCCGCGATGAGATaGAAGGTCCTGTCGGCCAGGATGATGTCGATCCCG +
Preference number: 6 (lower is better)
Translates to: HWLASSGDSAMR*KVLSARMMSIP
Trigger: CGGGATCGACATCATCCTGGCCGACAGGACCTTCCATCTCATCGCGGAGTCCCCCGAAGATGCCAGCCAATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CCA 72 bp TCTCTGCAGCAGGGTTATCCAGTGGTGCATCTCCTCTaGGGTGTCCGCGTTACAGTGCAGCACCCGGTTGGC +
Preference number: 6 (lower is better)
Translates to: SLQQGYPVVHLL*GVRVTVQHPVG
Trigger: GCCAACCGGGTGCTGCACTGTAACGCGGACACCCCAGAGGAGATGCACCACTGGATAACCCTGCTGCAGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CCA 72 bp GGATCAGCTGCTGGGTGGGCGTGTCGATTGGAGCCTTaGTGTCAGTCACATTCTGGATGGCGCTGGACCACC +
Preference number: 6 (lower is better)
Translates to: GSAAGWACRLEP*CQSHSGWRWTT
Trigger: GGTGGTCCAGCGCCATCCAGAATGTGACTGACACCAAGGCTCCAATCGACACGCCCACCCAGCAGCTGATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CCA 72 bp GGCGCTTCCACAAGCAGCGATAGCATTCGTTGGCAATaGCGAAGATGTGCGGTGGAAGCTCGCCCAGGTGGC +
Preference number: 6 (lower is better)
Translates to: GASTSSDSIRWQ*RRCAVEARPGG
Trigger: GCCACCTGGGCGAGCTTCCACCGCACATCTTCGCCATTGCCAACGAATGCTATCGCTGCTTGTGGAAGCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000110457.8
ENSMUST00000137601.8
CDS CAA 90 bp TCTTCGCCCGAAATCTCGCTCCCTACCGACAGGGAGCGCTCGATGTaGCGGACGCACTCGTCGATCTCGTCGAAGTTGAGCGACTCCAAG +
Preference number: 6 (lower is better)
Translates to: SSPEISLPTDRERSM*RTHSSISSKLSDSK
Trigger: CTTGGAGTCGCTCAACTTCGACGAGATCGACGAGTGCGTCCGCAACATCGAGCGCTCCCTGTCGGTAGGGAGCGAGATTTCGGGCGAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CAA 90 bp TGCAGGGAGTCCTTGAACTGCGAGCTGACAGTGGGCCGCCGGTGTTaGCTTCCGCATTTCAAGGTGTCCTGGTTGTTGCGGCTGGAGACG +
Preference number: 6 (lower is better)
Translates to: CRESLNCELTVGRRC*LPHFKVSWLLRLET
Trigger: CGTCTCCAGCCGCAACAACCAGGACACCTTGAAATGCGGAAGCAAACACCGGCGGCCCACTGTCAGCTCGCAGTTCAAGGACTCCCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000110457.8
ENSMUST00000137601.8
CDS TCA 72 bp TTGGCTTCTCTCCGCTGGCACTCTCGGCAAGCTCACTaGGCTCTTCGCCCGAAATCTCGCTCCCTACCGACA +
Preference number: 6 (lower is better)
Translates to: LASLRWHSRQAH*ALRPKSRSLPT
Trigger: TGTCGGTAGGGAGCGAGATTTCGGGCGAAGAGCTCAGTGAGCTTGCCGAGAGTGCCAGCGGAGAGAAGCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS TCA 72 bp CACCACCGTGTAGTTCATGTAAGGGTCCTCCTCGGATaGGTCGTCGCTCGTCCGGATGCCACTCGTTCGCTG +
Preference number: 6 (lower is better)
Translates to: HHRVVHVRVLLG*VVARPDATRSL
Trigger: CAGCGAACGAGTGGCATCCGGACGAGCGACGACTCATCCGAGGAGGACCCTTACATGAACTACACGGTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS GCA 72 bp TCGGTCAACGACAGCTCCTGCCGCTCCTTCATGCGCTaGAGATCCTCGATTTCCTTCTCCAGGCGGAGGATC +
Preference number: 6 (lower is better)
Translates to: SVNDSSCRSFMR*RSSISFSRRRI
Trigger: GATCCTCCGCCTGGAGAAGGAAATCGAGGATCTGCAGCGCATGAAGGAGCGGCAGGAGCTGTCGTTGACCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
ENSMUST00000135981.8
CDS GCA 72 bp TCCCCCTTGGATCTCTGCAGCAGGGTTATCCAGTGGTaGATCTCCTCTGGGGTGTCCGCGTTACAGTGCAGC +
Preference number: 6 (lower is better)
Translates to: SPLDLCSRVIQW*ISSGVSALQCS
Trigger: GCTGCACTGTAACGCGGACACCCCAGAGGAGATGCACCACTGGATAACCCTGCTGCAGAGATCCAAGGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CCA 72 bp CAGCAAGAAGCACCGTACTGTCGGCACTGGGGCTGGTaGGCACCACCGTGTAGTTCATGTAAGGGTCCTCCT +
Preference number: 6 (lower is better)
Translates to: QQEAPYCRHWGW*APPCSSCKGPP
Trigger: AGGAGGACCCTTACATGAACTACACGGTGGTGCCCACCAGCCCCAGTGCCGACAGTACGGTGCTTCTTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CCA 72 bp ACGCAGCAAGAAGCACCGTACTGTCGGCACTGGGGCTaGTGGGCACCACCGTGTAGTTCATGTAAGGGTCCT +
Preference number: 6 (lower is better)
Translates to: TQQEAPYCRHWG*WAPPCSSCKGP
Trigger: AGGACCCTTACATGAACTACACGGTGGTGCCCACCAGCCCCAGTGCCGACAGTACGGTGCTTCTTGCTGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CCA 72 bp GCATGGACGCAGCAAGAAGCACCGTACTGTCGGCACTaGGGCTGGTGGGCACCACCGTGTAGTTCATGTAAG +
Preference number: 6 (lower is better)
Translates to: AWTQQEAPYCRH*GWWAPPCSSCK
Trigger: CTTACATGAACTACACGGTGGTGCCCACCAGCCCCAGTGCCGACAGTACGGTGCTTCTTGCTGCGTCCATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CCA 72 bp GTGTCCCCCTTGGATCTCTGCAGCAGGGTTATCCAGTaGTGCATCTCCTCTGGGGTGTCCGCGTTACAGTGC +
Preference number: 6 (lower is better)
Translates to: VSPLDLCSRVIQ*CISSGVSALQC
Trigger: GCACTGTAACGCGGACACCCCAGAGGAGATGCACCACTGGATAACCCTGCTGCAGAGATCCAAGGGGGACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CCA 72 bp GCAGCTCCCGCTCGTCAACTACGATCTTGTACGTGTTaGCCAGCGGTGCCCCGAACGAGAGGATGTGCTCAT +
Preference number: 6 (lower is better)
Translates to: AAPARQLRSCTC*PAVPRTRGCAH
Trigger: ATGAGCACATCCTCTCGTTCGGGGCACCGCTGGCCAACACGTACAAGATCGTAGTTGACGAGCGGGAGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CCA 72 bp GCGATAGCATTCGTTGGCAATGGCGAAGATGTGCGGTaGAAGCTCGCCCAGGTGGCACCTGCTGTACTCCTC +
Preference number: 6 (lower is better)
Translates to: AIAFVGNGEDVR*KLAQVAPAVLL
Trigger: GAGGAGTACAGCAGGTGCCACCTGGGCGAGCTTCCACCGCACATCTTCGCCATTGCCAACGAATGCTATCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000110457.8
ENSMUST00000137601.8
CDS CAA 72 bp GAAATCTCGCTCCCTACCGACAGGGAGCGCTCGATGTaGCGGACGCACTCGTCGATCTCGTCGAAGTTGAGC +
Preference number: 6 (lower is better)
Translates to: EISLPTDRERSM*RTHSSISSKLS
Trigger: GCTCAACTTCGACGAGATCGACGAGTGCGTCCGCAACATCGAGCGCTCCCTGTCGGTAGGGAGCGAGATTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CAA 72 bp TGTGGACGAGTGGACCTGACTCAGCACGCTGAACCATaGGCTGGCATCTTCGGGGGACTCCGCGATGAGATG +
Preference number: 6 (lower is better)
Translates to: CGRVDLTQHAEP*AGIFGGLRDEM
Trigger: CATCTCATCGCGGAGTCCCCCGAAGATGCCAGCCAATGGTTCAGCGTGCTGAGTCAGGTCCACTCGTCCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CAA 72 bp ACGATGAACTCCTGGCCCTCCACCCTGGTGTCCCCCTaGGATCTCTGCAGCAGGGTTATCCAGTGGTGCATC +
Preference number: 6 (lower is better)
Translates to: TMNSWPSTLVSP*DLCSRVIQWCI
Trigger: GATGCACCACTGGATAACCCTGCTGCAGAGATCCAAGGGGGACACCAGGGTGGAGGGCCAGGAGTTCATCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CAA 72 bp TGGATCAGCTGCTGGGTGGGCGTGTCGATTGGAGCCTaGGTGTCAGTCACATTCTGGATGGCGCTGGACCAC +
Preference number: 6 (lower is better)
Translates to: WISCWVGVSIGA*VSVTFWMALDH
Trigger: GTGGTCCAGCGCCATCCAGAATGTGACTGACACCAAGGCTCCAATCGACACGCCCACCCAGCAGCTGATCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CAA 72 bp AGCAGCTCCCGCTCGTCAACTACGATCTTGTACGTGTaGGCCAGCGGTGCCCCGAACGAGAGGATGTGCTCA +
Preference number: 6 (lower is better)
Translates to: SSSRSSTTILYV*ASGAPNERMCS
Trigger: TGAGCACATCCTCTCGTTCGGGGCACCGCTGGCCAACACGTACAAGATCGTAGTTGACGAGCGGGAGCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CAA 72 bp GTCTCAAAGAGCAGCTCCCGCTCGTCAACTACGATCTaGTACGTGTTGGCCAGCGGTGCCCCGAACGAGAGG +
Preference number: 6 (lower is better)
Translates to: VSKSSSRSSTTI*YVLASGAPNER
Trigger: CCTCTCGTTCGGGGCACCGCTGGCCAACACGTACAAGATCGTAGTTGACGAGCGGGAGCTGCTCTTTGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CAA 90 bp ATGGCGCGTCCCCGGCTTCTGACGTGGCAGCTAGCTTTTCAAACTTaGCCAGGACGTCAGCTACGATGGTCCGGCTTTCGATGGCCTTGT +
Preference number: 6 (lower is better)
Translates to: MARPRLLTWQLAFQT*PGRQLRWSGFRWPC
Trigger: ACAAGGCCATCGAAAGCCGGACCATCGTAGCTGACGTCCTGGCAAAGTTTGAAAAGCTAGCTGCCACGTCAGAAGCCGGGGACGCGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CAA 90 bp ACCTCACTCGTCTCAAAGAGCAGCTCCCGCTCGTCAACTACGATCTaGTACGTGTTGGCCAGCGGTGCCCCGAACGAGAGGATGTGCTCA +
Preference number: 6 (lower is better)
Translates to: TSLVSKSSSRSSTTI*YVLASGAPNERMCS
Trigger: TGAGCACATCCTCTCGTTCGGGGCACCGCTGGCCAACACGTACAAGATCGTAGTTGACGAGCGGGAGCTGCTCTTTGAGACGAGTGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS TCA 72 bp CGCTGTCTTCAAAGGAGGACTGCGCCCCTTCTGAGCTaGACCGGTACGCTCCGGAACTGTTGTAGGTTCCCA +
Preference number: 6 (lower is better)
Translates to: RCLQRRTAPLLS*TGTLRNCCRFP
Trigger: TGGGAACCTACAACAGTTCCGGAGCGTACCGGTTCAGCTCAGAAGGGGCGCAGTCCTCCTTTGAAGACAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS TCA 72 bp CTCCTCGCTGTCTTCAAAGGAGGACTGCGCCCCTTCTaGGCTGAACCGGTACGCTCCGGAACTGTTGTAGGT +
Preference number: 6 (lower is better)
Translates to: LLAVFKGGLRPF*AEPVRSGTVVG
Trigger: ACCTACAACAGTTCCGGAGCGTACCGGTTCAGCTCAGAAGGGGCGCAGTCCTCCTTTGAAGACAGCGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS GCA 72 bp GAAGCCATGTCGTCCACGCCCTCCTCGTGCAGGGGGTaGATAGCTGTCACCTTCTGGTTGGTGATTGTACTC +
Preference number: 6 (lower is better)
Translates to: EAMSSTPSSCRG*IAVTFWLVIVL
Trigger: GAGTACAATCACCAACCAGAAGGTGACAGCTATGCACCCCCTGCACGAGGAGGGCGTGGACGACATGGCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000110457.8
ENSMUST00000137601.8
CDS CCA 72 bp GGCGTGTCGATTGGAGCCTTGGTGTCAGTCACATTCTaGATGGCGCTGGACCACCTAGTCGCCTCGTTCAGT +
Preference number: 6 (lower is better)
Translates to: GVSIGALVSVTF*MALDHLVASFS
Trigger: ACTGAACGAGGCGACTAGGTGGTCCAGCGCCATCCAGAATGTGACTGACACCAAGGCTCCAATCGACACGCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CCA 72 bp GTCTCTGCACAGAGTAAACCTCCTCGAGGGGTGGGATaGAGGTGTGCGGGGTATAGTCGCCCTGCAGATACT +
Preference number: 6 (lower is better)
Translates to: VSAQSKPPRGVG*RCAGYSRPADT
Trigger: AGTATCTGCAGGGCGACTATACCCCGCACACCTCCATCCCACCCCTCGAGGAGGTTTACTCTGTGCAGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CCA 72 bp GCCAGCGGTGCCCCGAACGAGAGGATGTGCTCATACTaGAAGACTTCTAACGGTTTGCCCTCTCCACGCTTG +
Preference number: 6 (lower is better)
Translates to: ASGAPNERMCSY*KTSNGLPSPRL
Trigger: CAAGCGTGGAGAGGGCAAACCGTTAGAAGTCTTCCAGTATGAGCACATCCTCTCGTTCGGGGCACCGCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CCA 72 bp GCCATGGCCAATGAGTCTCTGCTATCTACGGCCTGCTaGACACTGAGAGGCGTCAGGATCTCTTCTCCCCTG +
Preference number: 6 (lower is better)
Translates to: AMANESLLSTAC*TLRGVRISSPL
Trigger: CAGGGGAGAAGAGATCCTGACGCCTCTCAGTGTCCAGCAGGCCGTAGATAGCAGAGACTCATTGGCCATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000110457.8
ENSMUST00000137601.8
CDS CAA 72 bp TCCTTGAACTGCGAGCTGACAGTGGGCCGCCGGTGTTaGCTTCCGCATTTCAAGGTGTCCTGGTTGTTGCGG +
Preference number: 6 (lower is better)
Translates to: SLNCELTVGRRC*LPHFKVSWLLR
Trigger: CCGCAACAACCAGGACACCTTGAAATGCGGAAGCAAACACCGGCGGCCCACTGTCAGCTCGCAGTTCAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000110457.8
ENSMUST00000137601.8
CDS CAA 90 bp TTCCACTTGTCAATGATGCTGGTGCGAGCCGAGCAGACTTCCTCCTaGATCCACATGTCCAGCATCTGCTCCTCCTCCGCCTTCTGCCGA +
Preference number: 6 (lower is better)
Translates to: FHLSMMLVRAEQTSS*IHMSSICSSSAFCR
Trigger: TCGGCAGAAGGCGGAGGAGGAGCAGATGCTGGACATGTGGATCAAGGAGGAAGTCTGCTCGGCTCGCACCAGCATCATTGACAAGTGGAA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CAA 90 bp GTCTCAAAGAGCAGCTCCCGCTCGTCAACTACGATCTTGTACGTGTaGGCCAGCGGTGCCCCGAACGAGAGGATGTGCTCATACTGGAAG +
Preference number: 6 (lower is better)
Translates to: VSKSSSRSSTTILYV*ASGAPNERMCSYWK
Trigger: CTTCCAGTATGAGCACATCCTCTCGTTCGGGGCACCGCTGGCCAACACGTACAAGATCGTAGTTGACGAGCGGGAGCTGCTCTTTGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS TCA 72 bp GCTTCCATAGGAGTTGGAGAAAGTCACGCTGCTGCCTaGCGTGATGGCGCCATCCTCGTAATCGTCCTGGTC +
Preference number: 6 (lower is better)
Translates to: ASIGVGESHAAA*RDGAILVIVLV
Trigger: GACCAGGACGATTACGAGGATGGCGCCATCACGTCAGGCAGCAGCGTGACTTTCTCCAACTCCTATGGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS TCA 72 bp TCTTCTCGTCTGGGGGCACAACGGAGCACAGGCTGTTaGGGACCAGAGTGCCCAGTTTCAGAGCGTTCTTCT +
Preference number: 6 (lower is better)
Translates to: SSRLGAQRSTGC*GPECPVSERSS
Trigger: AGAAGAACGCTCTGAAACTGGGCACTCTGGTCCTCAACAGCCTGTGCTCCGTTGTGCCCCCAGACGAGAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS GCA 72 bp CCGTTTCTCAGCCAACAGCTGCCTGTAAACCCTGCGTaGCAGCTGTCCTCGCAGTTGCTTCTGGAACACGAT +
Preference number: 6 (lower is better)
Translates to: PFLSQQLPVNPA*QLSSQLLLEHD
Trigger: ATCGTGTTCCAGAAGCAACTGCGAGGACAGCTGGCACGCAGGGTTTACAGGCAGCTGTTGGCTGAGAAACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
ENSMUST00000124966.8
ENSMUST00000125667.3
ENSMUST00000135173.8
ENSMUST00000135981.8
ENSMUST00000137601.8
CDS GCA 72 bp CAGTGGTGCATCTCCTCTGGGGTGTCCGCGTTACAGTaGAGCACCCGGTTGGCTGTGATGATCACAAATGAG +
Preference number: 6 (lower is better)
Translates to: QWCISSGVSALQ*STRLAVMITNE
Trigger: CTCATTTGTGATCATCACAGCCAACCGGGTGCTGCACTGTAACGCGGACACCCCAGAGGAGATGCACCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS GCA 72 bp CGCCCAGCCAGAGCTCCTGGGGGAAGCCGCCTTCTTTaGACTCCACATCAAAGAGTGTTGATCCATAACCAG +
Preference number: 6 (lower is better)
Translates to: RPARAPGGSRLL*TPHQRVLIHNQ
Trigger: CTGGTTATGGATCAACACTCTTTGATGTGGAGTGCAAAGAAGGCGGCTTCCCCCAGGAGCTCTGGCTGGGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS GCA 72 bp CTGGATGTCTTCTCCTGCAGGCCCAGGTCCAAAGTCTaGTGGCTGATGACGGACAGGAACTTGAGGATCAGC +
Preference number: 6 (lower is better)
Translates to: LDVFSCRPRSKV*WLMTDRNLRIS
Trigger: GCTGATCCTCAAGTTCCTGTCCGTCATCAGCCAGCAGACTTTGGACCTGGGCCTGCAGGAGAAGACATCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000110457.8
ENSMUST00000137601.8
CDS GCA 72 bp AGGATCATGGATCTCTGGGTCAGTGCATCTGTGAGCTaGGTTGGGTCCAGCCCAAGCAAGTCCGCAGACCTA +
Preference number: 6 (lower is better)
Translates to: RIMDLWVSASVS*VGSSPSKSADL
Trigger: TAGGTCTGCGGACTTGCTTGGGCTGGACCCAACGCAGCTCACAGATGCACTGACCCAGAGATCCATGATCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000110457.8
ENSMUST00000137601.8
CDS GCA 72 bp CTCTTCTCCCCTGAGGATCATGGATCTCTGGGTCAGTaGATCTGTGAGCTGCGTTGGGTCCAGCCCAAGCAA +
Preference number: 6 (lower is better)
Translates to: LFSPEDHGSLGQ*ICELRWVQPKQ
Trigger: TTGCTTGGGCTGGACCCAACGCAGCTCACAGATGCACTGACCCAGAGATCCATGATCCTCAGGGGAGAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000110457.8
ENSMUST00000137601.8
CDS CCA 72 bp TGGGAGTTGATGGTGATCTTGCAGGAGCCTCCGCCATaGCAATACACTGTGGACGTCATTTCCTGCCGGTGG +
Preference number: 6 (lower is better)
Translates to: WELMVILQEPPP*QYTVDVISCRW
Trigger: CCACCGGCAGGAAATGACGTCCACAGTGTATTGCCATGGCGGAGGCTCCTGCAAGATCACCATCAACTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CCA 72 bp ACTCAAACAAGGCAAACATGTTCCTGCTGTCCTCCATaGCGAGCCCTCGGATCAGCTTCTCCACCACCTCCC +
Preference number: 6 (lower is better)
Translates to: TQTRQTCSCCPP*RALGSASPPPP
Trigger: GGGAGGTGGTGGAGAAGCTGATCCGAGGGCTCGCCATGGAGGACAGCAGGAACATGTTTGCCTTGTTTGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CCA 72 bp TGTCATGGCGCTTCCACAAGCAGCGATAGCATTCGTTaGCAATGGCGAAGATGTGCGGTGGAAGCTCGCCCA +
Preference number: 6 (lower is better)
Translates to: CHGASTSSDSIR*QWRRCAVEARP
Trigger: TGGGCGAGCTTCCACCGCACATCTTCGCCATTGCCAACGAATGCTATCGCTGCTTGTGGAAGCGCCATGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000110457.8
ENSMUST00000137601.8
CDS CCA 72 bp GTCAGGATCTCTTCTCCCCTGAGGATCATGGATCTCTaGGTCAGTGCATCTGTGAGCTGCGTTGGGTCCAGC +
Preference number: 6 (lower is better)
Translates to: VRISSPLRIMDL*VSASVSCVGSS
Trigger: GCTGGACCCAACGCAGCTCACAGATGCACTGACCCAGAGATCCATGATCCTCAGGGGAGAAGAGATCCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000110457.8
ENSMUST00000137601.8
CDS CCA 72 bp GGCCGCCGGTGTTTGCTTCCGCATTTCAAGGTGTCCTaGTTGTTGCGGCTGGAGACGTGTTCAAAGAGGTCA +
Preference number: 6 (lower is better)
Translates to: GRRCLLPHFKVS*LLRLETCSKRS
Trigger: TGACCTCTTTGAACACGTCTCCAGCCGCAACAACCAGGACACCTTGAAATGCGGAAGCAAACACCGGCGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000110457.8
ENSMUST00000137601.8
CDS CAA 72 bp CTGCCTGTAAACCCTGCGTGCCAGCTGTCCTCGCAGTaGCTTCTGGAACACGATGGCTGCCTTTTTCAGGTG +
Preference number: 6 (lower is better)
Translates to: LPVNPACQLSSQ*LLEHDGCLFQV
Trigger: CACCTGAAAAAGGCAGCCATCGTGTTCCAGAAGCAACTGCGAGGACAGCTGGCACGCAGGGTTTACAGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
ENSMUST00000124966.8
ENSMUST00000125667.3
ENSMUST00000135173.8
ENSMUST00000135981.8
ENSMUST00000137601.8
CDS CAA 72 bp ATCTTCTCGTCTGGGGGCACAACGGAGCACAGGCTGTaGAGGACCAGAGTGCCCAGTTTCAGAGCGTTCTTC +
Preference number: 6 (lower is better)
Translates to: IFSSGGTTEHRL*RTRVPSFRAFF
Trigger: GAAGAACGCTCTGAAACTGGGCACTCTGGTCCTCAACAGCCTGTGCTCCGTTGTGCCCCCAGACGAGAAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CAA 72 bp GAGCTTAGTGTTGCCATTAAGGAGTGCAGGGAGTCCTaGAACTGCGAGCTGACAGTGGGCCGCCGGTGTTTG +
Preference number: 6 (lower is better)
Translates to: ELSVAIKECRES*NCELTVGRRCL
Trigger: CAAACACCGGCGGCCCACTGTCAGCTCGCAGTTCAAGGACTCCCTGCACTCCTTAATGGCAACACTAAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110457.8
ENSMUST00000135981.8
ENSMUST00000137601.8
CDS CAA 90 bp TGGTGCATCTCCTCTGGGGTGTCCGCGTTACAGTGCAGCACCCGGTaGGCTGTGATGATCACAAATGAGTTGGGTCTATCAGGGCTGTCA +
Preference number: 6 (lower is better)
Translates to: WCISSGVSALQCSTR*AVMITNELGLSGLS
Trigger: TGACAGCCCTGATAGACCCAACTCATTTGTGATCATCACAGCCAACCGGGTGCTGCACTGTAACGCGGACACCCCAGAGGAGATGCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CAA 90 bp TTAATATCTTGGATCAGCTGCTGGGTGGGCGTGTCGATTGGAGCCTaGGTGTCAGTCACATTCTGGATGGCGCTGGACCACCTAGTCGCC +
Preference number: 6 (lower is better)
Translates to: LISWISCWVGVSIGA*VSVTFWMALDHLVA
Trigger: GGCGACTAGGTGGTCCAGCGCCATCCAGAATGTGACTGACACCAAGGCTCCAATCGACACGCCCACCCAGCAGCTGATCCAAGATATTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CAA 90 bp GCTTTCCGTTTTCCCAGCTCCGCTTTCCCCGCTGATGAGGACACATaGGTTGTCATGGCGCTTCCACAAGCAGCGATAGCATTCGTTGGC +
Preference number: 6 (lower is better)
Translates to: AFRFPSSAFPADEDT*VVMALPQAAIAFVG
Trigger: GCCAACGAATGCTATCGCTGCTTGTGGAAGCGCCATGACAACCAATGTGTCCTCATCAGCGGGGAAAGCGGAGCTGGGAAAACGGAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000110457.8
ENSMUST00000137601.8
CDS TCA 72 bp CTCGTACAGGCCAGCGATGGGCTGGTAGGGGTTCACTaGCGCGATGATGGAGCCGATGTAGGTATAGATTTG +
Preference number: 6 (lower is better)
Translates to: LVQASDGLVGVH*RDDGADVGIDL
Trigger: CAAATCTATACCTACATCGGCTCCATCATCGCGTCAGTGAACCCCTACCAGCCCATCGCTGGCCTGTACGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000110457.8
ENSMUST00000137601.8
CDS GCA 72 bp GTGCCCACAGCATTCTGGGGGTTTGCCTGCTCATCATaGATTTCTCTGATCTCCTGGTCTGTGGACGAGTGG +
Preference number: 6 (lower is better)
Translates to: VPTAFWGFACSS*ISLISWSVDEW
Trigger: CCACTCGTCCACAGACCAGGAGATCAGAGAAATGCATGATGAGCAGGCAAACCCCCAGAATGCTGTGGGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS GCA 72 bp CCCGACATCCAGTGTGCCCACAGCATTCTGGGGGTTTaGCTGCTCATCATGCATTTCTCTGATCTCCTGGTC +
Preference number: 6 (lower is better)
Translates to: PDIQCAHSILGV*LLIMHFSDLLV
Trigger: GACCAGGAGATCAGAGAAATGCATGATGAGCAGGCAAACCCCCAGAATGCTGTGGGCACACTGGATGTCGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS GCA 72 bp CTCGTCAACTACGATCTTGTACGTGTTGGCCAGCGGTaGCCCGAACGAGAGGATGTGCTCATACTGGAAGAC +
Preference number: 6 (lower is better)
Translates to: LVNYDLVRVGQR*PEREDVLILED
Trigger: GTCTTCCAGTATGAGCACATCCTCTCGTTCGGGGCACCGCTGGCCAACACGTACAAGATCGTAGTTGACGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CCA 72 bp GATGTCTTCTCCTGCAGGCCCAGGTCCAAAGTCTGCTaGCTGATGACGGACAGGAACTTGAGGATCAGCTTG +
Preference number: 6 (lower is better)
Translates to: DVFSCRPRSKVC*LMTDRNLRISL
Trigger: CAAGCTGATCCTCAAGTTCCTGTCCGTCATCAGCCAGCAGACTTTGGACCTGGGCCTGCAGGAGAAGACATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000110457.8
ENSMUST00000137601.8
CDS CCA 72 bp GTGCCAAGTAGCCTAAGATGTGAGCTCGGATCACCATaGCCGCACGGTCAATCTCCTCTTCCCGCCTCTTTT +
Preference number: 6 (lower is better)
Translates to: VPSSLRCELGSP*PHGQSPLPASF
Trigger: AAAAGAGGCGGGAAGAGGAGATTGACCGTGCGGCCATGGTGATCCGAGCTCACATCTTAGGCTACTTGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000110457.8
ENSMUST00000125667.3
ENSMUST00000135173.8
ENSMUST00000135981.8
ENSMUST00000137601.8
CDS CAA 72 bp CCTGGGAACTGTTCCCGTATCCTTTTCAGGTGGAACTaGAGGTATTTGAGGATCCCGCGGCTCGGCAGGAAG +
Preference number: 6 (lower is better)
Translates to: PGNCSRILFRWN*RYLRIPRLGRK
Trigger: CTTCCTGCCGAGCCGCGGGATCCTCAAATACCTCAAGTTCCACCTGAAAAGGATACGGGAACAGTTCCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CAA 72 bp TTTCCCAGCTCCGCTTTCCCCGCTGATGAGGACACATaGGTTGTCATGGCGCTTCCACAAGCAGCGATAGCA +
Preference number: 6 (lower is better)
Translates to: FPSSAFPADEDT*VVMALPQAAIA
Trigger: TGCTATCGCTGCTTGTGGAAGCGCCATGACAACCAATGTGTCCTCATCAGCGGGGAAAGCGGAGCTGGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000110457.8
ENSMUST00000137601.8
CDS CAA 90 bp CCTTGTCTCTGCCTCCTGATGGGCACGGAGGAGGTCAGCTTCTCTTaGCGCTCGCTCTCTTTCTCTTTCCTCTTCCTCTCTCTTCTTCTC +
Preference number: 6 (lower is better)
Translates to: PCLCLLMGTEEVSFS*RSLSFSFLFLSLLL
Trigger: GAGAAGAAGAGAGAGGAAGAGGAAAGAGAAAGAGAGCGAGCGCAAAGAGAAGCTGACCTCCTCCGTGCCCATCAGGAGGCAGAGACAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
ENSMUST00000125667.3
ENSMUST00000135981.8
CDS CAA 90 bp TCAGCTACGATGGTCCGGCTTTCGATGGCCTTGTCCACCTGTCCGTaGTACTCAAACAAGGCAAACATGTTCCTGCTGTCCTCCATGGCG +
Preference number: 6 (lower is better)
Translates to: SATMVRLSMALSTCP*YSNKANMFLLSSMA
Trigger: CGCCATGGAGGACAGCAGGAACATGTTTGCCTTGTTTGAGTACAACGGACAGGTGGACAAGGCCATCGAAAGCCGGACCATCGTAGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS TCA 72 bp CATAGGAGTTGGAGAAAGTCACGCTGCTGCCTGACGTaGTGGCGCCATCCTCGTAATCGTCCTGGTCATAGT +
Preference number: 6 (lower is better)
Translates to: HRSWRKSRCCLT*WRHPRNRPGHS
Trigger: ACTATGACCAGGACGATTACGAGGATGGCGCCATCACGTCAGGCAGCAGCGTGACTTTCTCCAACTCCTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS TCA 72 bp ATTTCTCTGATCTCCTGGTCTGTGGACGAGTGGACCTaGCTCAGCACGCTGAACCATTGGCTGGCATCTTCG +
Preference number: 6 (lower is better)
Translates to: ISLISWSVDEWT*LSTLNHWLASS
Trigger: CGAAGATGCCAGCCAATGGTTCAGCGTGCTGAGTCAGGTCCACTCGTCCACAGACCAGGAGATCAGAGAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS TCA 72 bp ACAGTGCAGCACCCGGTTGGCTGTGATGATCACAAATaGGTTGGGTCTATCAGGGCTGTCAGAGGCGCATAC +
Preference number: 6 (lower is better)
Translates to: TVQHPVGCDDHK*VGSIRAVRGAY
Trigger: GTATGCGCCTCTGACAGCCCTGATAGACCCAACTCATTTGTGATCATCACAGCCAACCGGGTGCTGCACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS TCA 72 bp GGCCAGCGATGGGCTGGTAGGGGTTCACTGACGCGATaGTGGAGCCGATGTAGGTATAGATTTGGTTCCTTT +
Preference number: 6 (lower is better)
Translates to: GQRWAGRGSLTR*WSRCRYRFGSF
Trigger: AAAGGAACCAAATCTATACCTACATCGGCTCCATCATCGCGTCAGTGAACCCCTACCAGCCCATCGCTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000110457.8
ENSMUST00000137601.8
CDS TCA 72 bp CCACTCAAAGCAGCGAGCATAAAGTGCCATGGCCAATaGGTCTCTGCTATCTACGGCCTGCTGGACACTGAG +
Preference number: 6 (lower is better)
Translates to: PLKAASIKCHGQ*VSAIYGLLDTE
Trigger: CTCAGTGTCCAGCAGGCCGTAGATAGCAGAGACTCATTGGCCATGGCACTTTATGCTCGCTGCTTTGAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000110457.8
ENSMUST00000137601.8
CDS GCA 72 bp CCTCCGCCATGGCAATACACTGTGGACGTCATTTCCTaGCGGTGGATCAGAGCTTCGATTTCATCTCGGGAA +
Preference number: 6 (lower is better)
Translates to: PPPWQYTVDVIS*RWIRASISSRE
Trigger: TTCCCGAGATGAAATCGAAGCTCTGATCCACCGGCAGGAAATGACGTCCACAGTGTATTGCCATGGCGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS GCA 72 bp CCTGTCCGTTGTACTCAAACAAGGCAAACATGTTCCTaGTGTCCTCCATGGCGAGCCCTCGGATCAGCTTCT +
Preference number: 6 (lower is better)
Translates to: PVRCTQTRQTCS*CPPWRALGSAS
Trigger: AGAAGCTGATCCGAGGGCTCGCCATGGAGGACAGCAGGAACATGTTTGCCTTGTTTGAGTACAACGGACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS GCA 72 bp GTAAAAGTCCTGAAAGGGTCTTCTGACGGCATACCCTaGTTTCCGAATCCTCACCGTCTCCAGCATCCCCGA +
Preference number: 6 (lower is better)
Translates to: VKVLKGSSDGIP*FPNPHRLQHPR
Trigger: TCGGGGATGCTGGAGACGGTGAGGATTCGGAAAGCAGGGTATGCCGTCAGAAGACCCTTTCAGGACTTTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000110457.8
ENSMUST00000125667.3
ENSMUST00000135173.8
ENSMUST00000137601.8
ENSMUST00000151360.7
CDS CCA 72 bp AATATCTTGGATCAGCTGCTGGGTGGGCGTGTCGATTaGAGCCTTGGTGTCAGTCACATTCTGGATGGCGCT +
Preference number: 6 (lower is better)
Translates to: NILDQLLGGRVD*SLGVSHILDGA
Trigger: AGCGCCATCCAGAATGTGACTGACACCAAGGCTCCAATCGACACGCCCACCCAGCAGCTGATCCAAGATATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CCA 72 bp AGTAGAATTTCCATGGCGCGTCCCCGGCTTCTGACGTaGCAGCTAGCTTTTCAAACTTTGCCAGGACGTCAG +
Preference number: 6 (lower is better)
Translates to: SRISMARPRLLT*QLAFQTLPGRQ
Trigger: CTGACGTCCTGGCAAAGTTTGAAAAGCTAGCTGCCACGTCAGAAGCCGGGGACGCGCCATGGAAATTCTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CAA 72 bp GCTTGTTCCTGGTTCATCCCCTGCAGTTTCTTCCACTaGTCAATGATGCTGGTGCGAGCCGAGCAGACTTCC +
Preference number: 6 (lower is better)
Translates to: ACSWFIPCSFFH*SMMLVRAEQTS
Trigger: GGAAGTCTGCTCGGCTCGCACCAGCATCATTGACAAGTGGAAGAAACTGCAGGGGATGAACCAGGAACAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CAA 72 bp AAATGCTTCCATGATTGGGCTGCTTTGAAGGATGGCTaGCTCGACGCTGGATGTCTTCTCCTGCAGGCCCAG +
Preference number: 6 (lower is better)
Translates to: KCFHDWAALKDG*LDAGCLLLQAQ
Trigger: CTGGGCCTGCAGGAGAAGACATCCAGCGTCGAGCAAGCCATCCTTCAAAGCAGCCCAATCATGGAAGCATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000110457.8
ENSMUST00000137601.8
CDS CAA 72 bp AGCCCAAGCAAGTCCGCAGACCTACCCAAAGCTGTTTaGAAGGGAATCTGCGCCCCTCCAGCAGTGATAAAC +
Preference number: 6 (lower is better)
Translates to: SPSKSADLPKAV*KGICAPPAVIN
Trigger: GTTTATCACTGCTGGAGGGGCGCAGATTCCCTTCAAAACAGCTTTGGGTAGGTCTGCGGACTTGCTTGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000110457.8
ENSMUST00000137601.8
CDS CAA 90 bp TCTTTGAATATCTTCTCGTCTGGGGGCACAACGGAGCACAGGCTGTaGAGGACCAGAGTGCCCAGTTTCAGAGCGTTCTTCTCTGAGCTC +
Preference number: 6 (lower is better)
Translates to: SLNIFSSGGTTEHRL*RTRVPSFRAFFSEL
Trigger: GAGCTCAGAGAAGAACGCTCTGAAACTGGGCACTCTGGTCCTCAACAGCCTGTGCTCCGTTGTGCCCCCAGACGAGAAGATATTCAAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CAA 90 bp TTGGCCATGGCTTGTTCCTGGTTCATCCCCTGCAGTTTCTTCCACTaGTCAATGATGCTGGTGCGAGCCGAGCAGACTTCCTCCTTGATC +
Preference number: 6 (lower is better)
Translates to: LAMACSWFIPCSFFH*SMMLVRAEQTSSLI
Trigger: GATCAAGGAGGAAGTCTGCTCGGCTCGCACCAGCATCATTGACAAGTGGAAGAAACTGCAGGGGATGAACCAGGAACAAGCCATGGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS TCA 72 bp GAGGACCAGAGTGCCCAGTTTCAGAGCGTTCTTCTCTaGGCTCTTGTAGTAGTCCAGGGAATTGTGCGTCAG +
Preference number: 6 (lower is better)
Translates to: EDQSAQFQSVLL*ALVVVQGIVRQ
Trigger: CTGACGCACAATTCCCTGGACTACTACAAGAGCTCAGAGAAGAACGCTCTGAAACTGGGCACTCTGGTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS GCA 72 bp ACATCCAGTGTGCCCACAGCATTCTGGGGGTTTGCCTaGTCATCATGCATTTCTCTGATCTCCTGGTCTGTG +
Preference number: 6 (lower is better)
Translates to: TSSVPTAFWGFA*SSCISLISWSV
Trigger: CACAGACCAGGAGATCAGAGAAATGCATGATGAGCAGGCAAACCCCCAGAATGCTGTGGGCACACTGGATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS GCA 72 bp GAGTTGAGGCAGTTCTCCTTAATATCTTGGATCAGCTaGTGGGTGGGCGTGTCGATTGGAGCCTTGGTGTCA +
Preference number: 6 (lower is better)
Translates to: ELRQFSLISWIS*WVGVSIGALVS
Trigger: TGACACCAAGGCTCCAATCGACACGCCCACCCAGCAGCTGATCCAAGATATTAAGGAGAACTGCCTCAACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS GCA 72 bp AGAGGATGTGCTCATACTGGAAGACTTCTAACGGTTTaGCCTCTCCACGCTTGTAGACAGACACGGCGTCTG +
Preference number: 6 (lower is better)
Translates to: RGCAHTGRLLTV*PLHACRQTRRL
Trigger: CAGACGCCGTGTCTGTCTACAAGCGTGGAGAGGGCAAACCGTTAGAAGTCTTCCAGTATGAGCACATCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS GCA 72 bp CTGCCCATAGTCTGTCTGGAAGACCACGACGCCTTCTaGACAGGAATTTACAGTACTCGGAAAATGCTGGCC +
Preference number: 6 (lower is better)
Translates to: LPIVCLEDHDAF*TGIYSTRKMLA
Trigger: GGCCAGCATTTTCCGAGTACTGTAAATTCCTGTGCAGAAGGCGTCGTGGTCTTCCAGACAGACTATGGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS GCA 72 bp GCCCCTCCAGCAGTGATAAACTCTATGTTGCCGAGATaGAGAATTCCCGCCAGCAACCTCAAAACTTCCCGA +
Preference number: 6 (lower is better)
Translates to: APPAVINSMLPR*RIPASNLKTSR
Trigger: TCGGGAAGTTTTGAGGTTGCTGGCGGGAATTCTGCATCTCGGCAACATAGAGTTTATCACTGCTGGAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000110457.8
ENSMUST00000137601.8
CDS GCA 72 bp TCCGCAGACCTACCCAAAGCTGTTTTGAAGGGAATCTaGGCCCCTCCAGCAGTGATAAACTCTATGTTGCCG +
Preference number: 6 (lower is better)
Translates to: SADLPKAVLKGI*APPAVINSMLP
Trigger: CGGCAACATAGAGTTTATCACTGCTGGAGGGGCGCAGATTCCCTTCAAAACAGCTTTGGGTAGGTCTGCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000110457.8
ENSMUST00000137601.8
CDS CCA 72 bp TCAATCAGCCCGACATCCAGTGTGCCCACAGCATTCTaGGGGTTTGCCTGCTCATCATGCATTTCTCTGATC +
Preference number: 6 (lower is better)
Translates to: SISPTSSVPTAF*GFACSSCISLI
Trigger: GATCAGAGAAATGCATGATGAGCAGGCAAACCCCCAGAATGCTGTGGGCACACTGGATGTCGGGCTGATTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CCA 72 bp CCATGGCAATACACTGTGGACGTCATTTCCTGCCGGTaGATCAGAGCTTCGATTTCATCTCGGGAAGGCACA +
Preference number: 6 (lower is better)
Translates to: PWQYTVDVISCR*IRASISSREGT
Trigger: TGTGCCTTCCCGAGATGAAATCGAAGCTCTGATCCACCGGCAGGAAATGACGTCCACAGTGTATTGCCATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CAA 72 bp ATGATCTCCTTGGCGGTGCGGACTTCCACGGTGCCCTaGAGCTTCTCCTCGCTATCGTTTTCAAAGTACATC +
Preference number: 6 (lower is better)
Translates to: MISLAVRTSTVP*SFSSLSFSKYI
Trigger: GATGTACTTTGAAAACGATAGCGAGGAGAAGCTCAAGGGCACCGTGGAAGTCCGCACCGCCAAGGAGATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CAA 72 bp ATGGTCCGGCTTTCGATGGCCTTGTCCACCTGTCCGTaGTACTCAAACAAGGCAAACATGTTCCTGCTGTCC +
Preference number: 6 (lower is better)
Translates to: MVRLSMALSTCP*YSNKANMFLLS
Trigger: GGACAGCAGGAACATGTTTGCCTTGTTTGAGTACAACGGACAGGTGGACAAGGCCATCGAAAGCCGGACCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CAA 72 bp AGGTCCAAAGTCTGCTGGCTGATGACGGACAGGAACTaGAGGATCAGCTTGGTGCTTTCCGTTTTCCCAGCT +
Preference number: 6 (lower is better)
Translates to: RSKVCWLMTDRN*RISLVLSVFPA
Trigger: AGCTGGGAAAACGGAAAGCACCAAGCTGATCCTCAAGTTCCTGTCCGTCATCAGCCAGCAGACTTTGGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000110457.8
ENSMUST00000137601.8
CDS CAA 72 bp GGAATCTGCGCCCCTCCAGCAGTGATAAACTCTATGTaGCCGAGATGCAGAATTCCCGCCAGCAACCTCAAA +
Preference number: 6 (lower is better)
Translates to: GICAPPAVINSM*PRCRIPASNLK
Trigger: TTTGAGGTTGCTGGCGGGAATTCTGCATCTCGGCAACATAGAGTTTATCACTGCTGGAGGGGCGCAGATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000110457.8
ENSMUST00000137601.8
CDS CAA 90 bp AGCCAACAGCTGCCTGTAAACCCTGCGTGCCAGCTGTCCTCGCAGTaGCTTCTGGAACACGATGGCTGCCTTTTTCAGGTGCAAAAATTT +
Preference number: 6 (lower is better)
Translates to: SQQLPVNPACQLSSQ*LLEHDGCLFQVQKF
Trigger: AAATTTTTGCACCTGAAAAAGGCAGCCATCGTGTTCCAGAAGCAACTGCGAGGACAGCTGGCACGCAGGGTTTACAGGCAGCTGTTGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
ENSMUST00000124966.8
ENSMUST00000125667.3
ENSMUST00000135173.8
ENSMUST00000135981.8
ENSMUST00000137601.8
CDS CAA 90 bp GTGTTGTCTATGATCTCCTTGGCGGTGCGGACTTCCACGGTGCCCTaGAGCTTCTCCTCGCTATCGTTTTCAAAGTACATCAGCTTCGAC +
Preference number: 6 (lower is better)
Translates to: VLSMISLAVRTSTVP*SFSSLSFSKYISFD
Trigger: GTCGAAGCTGATGTACTTTGAAAACGATAGCGAGGAGAAGCTCAAGGGCACCGTGGAAGTCCGCACCGCCAAGGAGATCATAGACAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CAA 90 bp AACTTTGCCAGGACGTCAGCTACGATGGTCCGGCTTTCGATGGCCTaGTCCACCTGTCCGTTGTACTCAAACAAGGCAAACATGTTCCTG +
Preference number: 6 (lower is better)
Translates to: NFARTSATMVRLSMA*STCPLYSNKANMFL
Trigger: CAGGAACATGTTTGCCTTGTTTGAGTACAACGGACAGGTGGACAAGGCCATCGAAAGCCGGACCATCGTAGCTGACGTCCTGGCAAAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CAA 90 bp CAGGATGCCCTGGATGATAGGGATGGGGTCGGACATGGACTCCAGTaGTTGGAGAGAATTGAATATCTTGATGGCTTCGTCCTGAAGGGT +
Preference number: 6 (lower is better)
Translates to: QDALDDRDGVGHGLQ*LERIEYLDGFVLKG
Trigger: ACCCTTCAGGACGAAGCCATCAAGATATTCAATTCTCTCCAACAACTGGAGTCCATGTCCGACCCCATCCCTATCATCCAGGGCATCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS TCA 72 bp GAAGCCGCCTTCTTTGCACTCCACATCAAAGAGTGTTaGTCCATAACCAGGCCACTCCTTGATCAGGGCCAT +
Preference number: 6 (lower is better)
Translates to: EAAFFALHIKEC*SITRPLLDQGH
Trigger: ATGGCCCTGATCAAGGAGTGGCCTGGTTATGGATCAACACTCTTTGATGTGGAGTGCAAAGAAGGCGGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS TCA 72 bp TTCGCATTGCCAAATGCTTCCATGATTGGGCTGCTTTaGAGGATGGCTTGCTCGACGCTGGATGTCTTCTCC +
Preference number: 6 (lower is better)
Translates to: FALPNASMIGLL*RMACSTLDVFS
Trigger: GGAGAAGACATCCAGCGTCGAGCAAGCCATCCTTCAAAGCAGCCCAATCATGGAAGCATTTGGCAATGCGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000110457.8
ENSMUST00000137601.8
CDS GCA 72 bp AAAGGATTTGAGGAGCTTAGTGTTGCCATTAAGGAGTaGAGGGAGTCCTTGAACTGCGAGCTGACAGTGGGC +
Preference number: 6 (lower is better)
Translates to: KGFEELSVAIKE*RESLNCELTVG
Trigger: GCCCACTGTCAGCTCGCAGTTCAAGGACTCCCTGCACTCCTTAATGGCAACACTAAGCTCCTCAAATCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110457.8
ENSMUST00000135981.8
ENSMUST00000137601.8
CDS GCA 72 bp CGGTCAATCTCCTCTTCCCGCCTCTTTTCCAGTTTCTaGTCCAAGGATTCTCGAAGGAAGACCTTGGTCTTC +
Preference number: 6 (lower is better)
Translates to: RSISSSRLFSSF*SKDSRRKTLVF
Trigger: GAAGACCAAGGTCTTCCTTCGAGAATCCTTGGAGCAGAAACTGGAAAAGAGGCGGGAAGAGGAGATTGACCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000110457.8
ENSMUST00000125667.3
ENSMUST00000135173.8
ENSMUST00000137601.8
CDS GCA 72 bp CGGTCAATCTCCTCTTCCCGCCTCTTTTCCAGTTTCTaGTCCAAGGATTCTCGAAGGAAGACCTTCTGTGTG +
Preference number: 6 (lower is better)
Translates to: RSISSSRLFSSF*SKDSRRKTFCV
Trigger: CACACAGAAGGTCTTCCTTCGAGAATCCTTGGAGCAGAAACTGGAAAAGAGGCGGGAAGAGGAGATTGACCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135981.8
CDS CCA 72 bp GTGCCAGCTGTCCTCGCAGTTGCTTCTGGAACACGATaGCTGCCTTTTTCAGGTGCAAAAATTTCTTCCTCG +
Preference number: 6 (lower is better)
Translates to: VPAVLAVASGTR*LPFSGAKISSS
Trigger: CGAGGAAGAAATTTTTGCACCTGAAAAAGGCAGCCATCGTGTTCCAGAAGCAACTGCGAGGACAGCTGGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
ENSMUST00000124966.8
ENSMUST00000125667.3
ENSMUST00000135173.8
ENSMUST00000135981.8
ENSMUST00000137601.8
CDS CCA 72 bp CTCGCCGGTAGGAAAGTTCATCATCTGTATCAAACCTaGAGTCGAAGTCCTCCTCGCTGTCTTCAAAGGAGG +
Preference number: 6 (lower is better)
Translates to: LAGRKVHHLYQT*SRSPPRCLQRR
Trigger: CCTCCTTTGAAGACAGCGAGGAGGACTTCGACTCCAGGTTTGATACAGATGATGAACTTTCCTACCGGCGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CCA 72 bp CCTTCTGCACAGGAATTTACAGTACTCGGAAAATGCTaGCCATTTTCTCTTAGCCAGACCCGTGCTCCCTCG +
Preference number: 6 (lower is better)
Translates to: PSAQEFTVLGKC*PFSLSQTRAPS
Trigger: CGAGGGAGCACGGGTCTGGCTAAGAGAAAATGGCCAGCATTTTCCGAGTACTGTAAATTCCTGTGCAGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110457.8
CDS CAA 72 bp CCACTCCTTGATCAGGGCCATATACTTGGCCATGGCTaGTTCCTGGTTCATCCCCTGCAGTTTCTTCCACTT +
Preference number: 6 (lower is better)
Translates to: PLLDQGHILGHG*FLVHPLQFLPL
Trigger: AAGTGGAAGAAACTGCAGGGGATGAACCAGGAACAAGCCATGGCCAAGTATATGGCCCTGATCAAGGAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CAA 72 bp CTTCGCATTGCCAAATGCTTCCATGATTGGGCTGCTTaGAAGGATGGCTTGCTCGACGCTGGATGTCTTCTC +
Preference number: 6 (lower is better)
Translates to: LRIAKCFHDWAA*KDGLLDAGCLL
Trigger: GAGAAGACATCCAGCGTCGAGCAAGCCATCCTTCAAAGCAGCCCAATCATGGAAGCATTTGGCAATGCGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000110457.8
ENSMUST00000137601.8
CDS CCA 72 bp ACTTCCATTGCCGTGATAACTTGTCTGAAGGATTCCTaGTCGCTGATCGTCTTGTCTTCCGTACACCCAGAC +
Preference number: 6 (lower is better)
Translates to: TSIAVITCLKDS*SLIVLSSVHPD
Trigger: GTCTGGGTGTACGGAAGACAAGACGATCAGCGACCAGGAATCCTTCAGACAAGTTATCACGGCAATGGAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000110457.8
ENSMUST00000137601.8
CDS CCA 72 bp CAGCTGGTTGAGCACTACCACCTGATCAAACTGGTCTaGCATCTTCTGTGTGTTTGGCTTGATGCATCTGAC +
Preference number: 6 (lower is better)
Translates to: QLVEHYHLIKLV*HLLCVWLDASD
Trigger: GTCAGATGCATCAAGCCAAACACACAGAAGATGCCAGACCAGTTTGATCAGGTGGTAGTGCTCAACCAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000110457.8
ENSMUST00000137601.8
CDS CAA 72 bp CCCGCCAGCAACCTCAAAACTTCCCGAACTTCCTCCTaGCTGAATTGCATGACTTCCATTGCCGTGATAACT +
Preference number: 6 (lower is better)
Translates to: PASNLKTSRTSS*LNCMTSIAVIT
Trigger: AGTTATCACGGCAATGGAAGTCATGCAATTCAGCAAGGAGGAAGTTCGGGAAGTTTTGAGGTTGCTGGCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000110457.8
ENSMUST00000137601.8
CDS CAA 90 bp CCGAAGATGTCAAGGATGCCGATGGATTTGAAGTCGTCTTTGCCTTaGATCCGGCTGTTGATCTTCTTGATCACCCACTCAAAGCAGCGA +
Preference number: 6 (lower is better)
Translates to: PKMSRMPMDLKSSLP*IRLLIFLITHSKQR
Trigger: TCGCTGCTTTGAGTGGGTGATCAAGAAGATCAACAGCCGGATCAAAGGCAAAGACGACTTCAAATCCATCGGCATCCTTGACATCTTCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000110457.8
ENSMUST00000137601.8
CDS TCA 72 bp CATCAAAGAGTGTTGATCCATAACCAGGCCACTCCTTaGTCAGGGCCATATACTTGGCCATGGCTTGTTCCT +
Preference number: 6 (lower is better)
Translates to: HQRVLIHNQATP*SGPYTWPWLVP
Trigger: AGGAACAAGCCATGGCCAAGTATATGGCCCTGATCAAGGAGTGGCCTGGTTATGGATCAACACTCTTTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS GCA 72 bp CCGAACTTCCTCCTTGCTGAATTGCATGACTTCCATTaGCGTGATAACTTGTCTGAAGGATTCCTGGTCGCT +
Preference number: 6 (lower is better)
Translates to: PNFLLAELHDFH*RDNLSEGFLVA
Trigger: AGCGACCAGGAATCCTTCAGACAAGTTATCACGGCAATGGAAGTCATGCAATTCAGCAAGGAGGAAGTTCGG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000110457.8
ENSMUST00000137601.8
CDS CCA 72 bp GTAGATAAAGAGGGCGTACTTCTCCATCTCGGTTCCTaGGAACTGTTCCCGTATCCTTTTCAGGTGGAACTT +
Preference number: 6 (lower is better)
Translates to: VDKEGVLLHLGS*ELFPYPFQVEL
Trigger: AAGTTCCACCTGAAAAGGATACGGGAACAGTTCCCAGGAACCGAGATGGAGAAGTACGCCCTCTTTATCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CCA 72 bp TTGATCAGGGCCATATACTTGGCCATGGCTTGTTCCTaGTTCATCCCCTGCAGTTTCTTCCACTTGTCAATG +
Preference number: 6 (lower is better)
Translates to: LIRAIYLAMACS*FIPCSFFHLSM
Trigger: CATTGACAAGTGGAAGAAACTGCAGGGGATGAACCAGGAACAAGCCATGGCCAAGTATATGGCCCTGATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CAA 72 bp CTGGATGATAGGGATGGGGTCGGACATGGACTCCAGTaGTTGGAGAGAATTGAATATCTTGATGGCTTCGTC +
Preference number: 6 (lower is better)
Translates to: LDDRDGVGHGLQ*LERIEYLDGFV
Trigger: GACGAAGCCATCAAGATATTCAATTCTCTCCAACAACTGGAGTCCATGTCCGACCCCATCCCTATCATCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CAA 90 bp TGCAGAATTCCCGCCAGCAACCTCAAAACTTCCCGAACTTCCTCCTaGCTGAATTGCATGACTTCCATTGCCGTGATAACTTGTCTGAAG +
Preference number: 6 (lower is better)
Translates to: CRIPASNLKTSRTSS*LNCMTSIAVITCLK
Trigger: CTTCAGACAAGTTATCACGGCAATGGAAGTCATGCAATTCAGCAAGGAGGAAGTTCGGGAAGTTTTGAGGTTGCTGGCGGGAATTCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000110457.8
ENSMUST00000137601.8
CDS CAA 72 bp TTCTTCACAATCATGCTGATATACGCTTTCATGAGCTaGGCCACATCCACCACCTCACTCGTCTCAAAGAGC +
Preference number: 6 (lower is better)
Translates to: FFTIMLIYAFMS*ATSTTSLVSKS
Trigger: GCTCTTTGAGACGAGTGAGGTGGTGGATGTGGCCAAGCTCATGAAAGCGTATATCAGCATGATTGTGAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
CDS CAA 72 bp ATGGATTTGAAGTCGTCTTTGCCTTTGATCCGGCTGTaGATCTTCTTGATCACCCACTCAAAGCAGCGAGCA +
Preference number: 6 (lower is better)
Translates to: MDLKSSLPLIRL*IFLITHSKQRA
Trigger: TGCTCGCTGCTTTGAGTGGGTGATCAAGAAGATCAACAGCCGGATCAAAGGCAAAGACGACTTCAAATCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000110457.8
ENSMUST00000137601.8
CDS CAA 72 bp TCAAGGATGCCGATGGATTTGAAGTCGTCTTTGCCTTaGATCCGGCTGTTGATCTTCTTGATCACCCACTCA +
Preference number: 6 (lower is better)
Translates to: SRMPMDLKSSLP*IRLLIFLITHS
Trigger: TGAGTGGGTGATCAAGAAGATCAACAGCCGGATCAAAGGCAAAGACGACTTCAAATCCATCGGCATCCTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000110457.8
ENSMUST00000137601.8
CDS CAA 90 bp TCAAATCCGAAGATGTCAAGGATGCCGATGGATTTGAAGTCGTCTTaGCCTTTGATCCGGCTGTTGATCTTCTTGATCACCCACTCAAAG +
Preference number: 6 (lower is better)
Translates to: SNPKMSRMPMDLKSS*PLIRLLIFLITHSK
Trigger: CTTTGAGTGGGTGATCAAGAAGATCAACAGCCGGATCAAAGGCAAAGACGACTTCAAATCCATCGGCATCCTTGACATCTTCGGATTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000110457.8
ENSMUST00000137601.8
CDS CAA 72 bp AAGATGTCAAGGATGCCGATGGATTTGAAGTCGTCTTaGCCTTTGATCCGGCTGTTGATCTTCTTGATCACC +
Preference number: 6 (lower is better)
Translates to: KMSRMPMDLKSS*PLIRLLIFLIT
Trigger: GGTGATCAAGAAGATCAACAGCCGGATCAAAGGCAAAGACGACTTCAAATCCATCGGCATCCTTGACATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000110457.8
ENSMUST00000137601.8
CDS GCA 72 bp AACCTCAAAACTTCCCGAACTTCCTCCTTGCTGAATTaGATGACTTCCATTGCCGTGATAACTTGTCTGAAG +
Preference number: 6 (lower is better)
Translates to: NLKTSRTSSLLN*MTSIAVITCLK
Trigger: CTTCAGACAAGTTATCACGGCAATGGAAGTCATGCAATTCAGCAAGGAGGAAGTTCGGGAAGTTTTGAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000110457.8
ENSMUST00000137601.8
CDS CCA 72 bp TCTTCCTCGCAAGGAAAGCTCTGTAATTCTTCTGTATaGTCACCACACCACAGAGGACCTTTCTATATTGCT +
Preference number: 6 (lower is better)
Translates to: SSSQGKLCNSSV*SPHHRGPFYIA
Trigger: AGCAATATAGAAAGGTCCTCTGTGGTGTGGTGACCATACAGAAGAATTACAGAGCTTTCCTTGCGAGGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8
ENSMUST00000124966.8
ENSMUST00000125667.3
ENSMUST00000135173.8
ENSMUST00000135981.8
ENSMUST00000137601.8
CDS CCA 72 bp CTGTTCAAACATAAACGCAAACTCCACGCTGTCTTTTaGCATGCTGTCGGTGTCCAGGAAGCAATAAAGTTT +
Preference number: 6 (lower is better)
Translates to: LFKHKRKLHAVF*HAVGVQEAIKF
Trigger: AAACTTTATTGCTTCCTGGACACCGACAGCATGCCAAAAGACAGCGTGGAGTTTGCGTTTATGTTTGAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022882.12
ENSMUST00000110457.8