Pregenerated sensors for MYNN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037730Ensembl transcript IDs: ENSMUST00000047502.9, ENSMUST00000192715.6, ENSMUST00000195396.6, ENSMUST00000195751.2
Found 208 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAGTGGCTTGGTGCTGCTGTGTTGTTAGGGGCTGTGCTGCTCGCCTaGGGAATGCGGGAGGAGGATGTGGGGGACAGAGCCACTTTAGGT | + |
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Preference number: 1 (lower is better) Translates to: EWLGAAVLLGAVLLA*GMREEDVGDRATLG Trigger: ACCTAAAGTGGCTCTGTCCCCCACATCCTCCTCCCGCATTCCCCAGGCGAGCAGCACAGCCCCTAACAACACAGCAGCACCAAGCCACTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000192715.6 ENSMUST00000195396.6 |
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| 3UTR TCA 90 bp | CCGTGGACCTCAGCAGCGTGTCTGATGCAGGAGACTGACTGTCCGTaGCAGGCAGGAGCATCTGGTGGTCTTCAGTCCCAAGTGGAAGCG | + |
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Preference number: 1 (lower is better) Translates to: PWTSAACLMQETDCP*QAGASGGLQSQVEA Trigger: CGCTTCCACTTGGGACTGAAGACCACCAGATGCTCCTGCCTGTCACGGACAGTCAGTCTCCTGCATCAGACACGCTGCTGAGGTCCACGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
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| 3UTR TCA 90 bp | CTGCGGTTCCGAGTACCCATTCACCGTGGACCTCAGCAGCGTGTCTaGTGCAGGAGACTGACTGTCCGTGACAGGCAGGAGCATCTGGTG | + |
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Preference number: 1 (lower is better) Translates to: LRFRVPIHRGPQQRV*CRRLTVRDRQEHLV Trigger: CACCAGATGCTCCTGCCTGTCACGGACAGTCAGTCTCCTGCATCAGACACGCTGCTGAGGTCCACGGTGAATGGGTACTCGGAACCGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
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| 3UTR TCA 90 bp | TACCCATTCACCGTGGACCTCAGCAGCGTGTCTGATGCAGGAGACTaGCTGTCCGTGACAGGCAGGAGCATCTGGTGGTCTTCAGTCCCA | + |
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Preference number: 1 (lower is better) Translates to: YPFTVDLSSVSDAGD*LSVTGRSIWWSSVP Trigger: TGGGACTGAAGACCACCAGATGCTCCTGCCTGTCACGGACAGTCAGTCTCCTGCATCAGACACGCTGCTGAGGTCCACGGTGAATGGGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
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| 3UTR TCA 90 bp | CACCAAGCAGTGCTTGGGAGGCAGCTCTCAGTGTTTGGTCCATGCTaGAATCAGCTACGAGGCTTCTCTATCAAATATCTGCCCCAGCAC | + |
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Preference number: 1 (lower is better) Translates to: HQAVLGRQLSVFGPC*NQLRGFSIKYLPQH Trigger: GTGCTGGGGCAGATATTTGATAGAGAAGCCTCGTAGCTGATTTCAGCATGGACCAAACACTGAGAGCTGCCTCCCAAGCACTGCTTGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192715.6 ENSMUST00000195396.6 |
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| 3UTR GCA 90 bp | CAGAACGTCATTTCAAGTGCTTCTCAAAGACAGAGCACCAAGCAGTaGTTGGGAGGCAGCTCTCAGTGTTTGGTCCATGCTGAAATCAGC | + |
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Preference number: 1 (lower is better) Translates to: QNVISSASQRQSTKQ*LGGSSQCLVHAEIS Trigger: GCTGATTTCAGCATGGACCAAACACTGAGAGCTGCCTCCCAAGCACTGCTTGGTGCTCTGTCTTTGAGAAGCACTTGAAATGACGTTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192715.6 ENSMUST00000195396.6 |
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| 3UTR CCA 90 bp | AAAGACAGAGCACCAAGCAGTGCTTGGGAGGCAGCTCTCAGTGTTTaGTCCATGCTGAAATCAGCTACGAGGCTTCTCTATCAAATATCT | + |
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Preference number: 1 (lower is better) Translates to: KDRAPSSAWEAALSV*SMLKSATRLLYQIS Trigger: AGATATTTGATAGAGAAGCCTCGTAGCTGATTTCAGCATGGACCAAACACTGAGAGCTGCCTCCCAAGCACTGCTTGGTGCTCTGTCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192715.6 ENSMUST00000195396.6 |
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| 3UTR GCA 90 bp | CAGGACTTATCAGCAATGGAACTGACTGGGAAACTGAACTTAAAATaGAAAGTGAAATCAACTGATATGCAGACAGTGAGAGGGGAAGAG | + |
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Preference number: 1 (lower is better) Translates to: QDLSAMELTGKLNLK*KVKSTDMQTVRGEE Trigger: CTCTTCCCCTCTCACTGTCTGCATATCAGTTGATTTCACTTTGCATTTTAAGTTCAGTTTCCCAGTCAGTTCCATTGCTGATAAGTCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 ENSMUST00000195396.6 ENSMUST00000195751.2 |
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| 3UTR GCA 90 bp | TTCTCTGTACGGAGTCTTGTTCGCTTACAGCATGGTCATCTACACTaGAATCTGGATTTTTATCAGTACCAGAATGGACCTTTGTTTTAT | + |
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Preference number: 1 (lower is better) Translates to: FSVRSLVRLQHGHLH*NLDFYQYQNGPLFY Trigger: ATAAAACAAAGGTCCATTCTGGTACTGATAAAAATCCAGATTGCAGTGTAGATGACCATGCTGTAAGCGAACAAGACTCCGTACAGAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
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| 3UTR TCA 90 bp | TTCCATACTGGTCCACAGGGCTTACAAACAGAAACACTTCGAAGTTaGTATTACTGTAGATTTTGTTTAAACAGCAAGGAGAGAACAACA | + |
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Preference number: 1 (lower is better) Translates to: FHTGPQGLQTETLRS*YYCRFCLNSKERTT Trigger: TGTTGTTCTCTCCTTGCTGTTTAAACAAAATCTACAGTAATATCAACTTCGAAGTGTTTCTGTTTGTAAGCCCTGTGGACCAGTATGGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 ENSMUST00000195396.6 ENSMUST00000195751.2 |
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| 3UTR-3UTR GCA 90 bp | TTCTCATGTGCCTTCGCAGGCTGCTGGCTTCCGAAAACACCTTCCCGCAAGTGTGGCCTTGGAAAACCTTaGATCCAGCTCTTCCCCGGC | + |
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Preference number: 2 (lower is better) Translates to: FSCAFAGCWLPKTPSRKCGLGKP*IQLFPG Trigger: GCCGGGGAAGAGCTGGATGCAAGGTTTTCCAAGGCC...ACACTTGCGGGAAGGTGTTTTCGGAAGCCAGCAGCCTGCGAAGGCACATGAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
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| 3UTR-3UTR TCA 90 bp | CCAAGCAGTGCTTGGGAGGCAGCTCTCAGTGTTTGGTCCATGCTGAAATCAGCTCTGATATGCAGACAGTaGGAGGGGAAGAGGGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: PSSAWEAALSVWSMLKSALICRQ*EGKREQ Trigger: CTGCTCCCTCTTCCCCTCTCACTGTCTGCATATCAG...AGCTGATTTCAGCATGGACCAAACACTGAGAGCTGCCTCCCAAGCACTGCTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192715.6 ENSMUST00000195396.6 |
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| 3UTR-3UTR TCA 90 bp | AAAATCAACTGCGGTTCCGAGTACCCATTCACCGTGGACCTCAGCAGCGTGTCTGGTTTAGGGTTTGCCTaGACTGAGTCCGTGGAGACT | + |
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Preference number: 2 (lower is better) Translates to: KINCGSEYPFTVDLSSVSGLGFA*TESVET Trigger: AGTCTCCACGGACTCAGTTCAGGCAAACCCTAAACC...AGACACGCTGCTGAGGTCCACGGTGAATGGGTACTCGGAACCGCAGTTGATTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
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| 3UTR-3UTR CCA 90 bp | AGCTTTCAGATGCTAGTTAGCAAGTTGGGGATTGAGTGGCTTGGTGCTGCTGTGGCCTTCGCAGGCTGCTaGCTTCCGAAAACACCTTCC | + |
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Preference number: 2 (lower is better) Translates to: SFQMLVSKLGIEWLGAAVAFAGC*LPKTPS Trigger: GGAAGGTGTTTTCGGAAGCCAGCAGCCTGCGAAGGC...CACAGCAGCACCAAGCCACTCAATCCCCAACTTGCTAACTAGCATCTGAAAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195396.6 |
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| 3UTR-3UTR CCA 90 bp | TGGTCTTCAGTCCCAAGTGGAAGCGCTAAGGGTAGAGTCATATCAGAAGGCTTCGTCAGCGTGCTGGCCTaGGCAAATCTCTGCCCACAT | + |
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Preference number: 2 (lower is better) Translates to: WSSVPSGSAKGRVISEGFVSVLA*ANLCPH Trigger: ATGTGGGCAGAGATTTGCCCAGGCCAGCACGCTGAC...GAAGCCTTCTGATATGACTCTACCCTTAGCGCTTCCACTTGGGACTGAAGACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
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| 3UTR-3UTR CCA 90 bp | TGGTCTTCAGTCCCAAGTGGAAGCGCTAAGGGTAGAGTCATATCAGAAGGCTTCGATAGGTCAGCGTGCTaGCCTGGGCAAATCTCTGCC | + |
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Preference number: 2 (lower is better) Translates to: WSSVPSGSAKGRVISEGFDRSAC*PGQISA Trigger: GGCAGAGATTTGCCCAGGCCAGCACGCTGACCTATC...GAAGCCTTCTGATATGACTCTACCCTTAGCGCTTCCACTTGGGACTGAAGACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
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| 3UTR-3UTR TCA 90 bp | ATGGCAGAGATGAGAAACAGTCACCAGGACTTATCAGCAATGGAACTGACTGGGCAAGCCAGCACTGCCTaGTGCAGGGTCAGGTGCTTT | + |
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Preference number: 2 (lower is better) Translates to: MAEMRNSHQDLSAMELTGQASTA*CRVRCF Trigger: AAAGCACCTGACCCTGCATCAGGCAGTGCTGGCTTG...CCCAGTCAGTTCCATTGCTGATAAGTCCTGGTGACTGTTTCTCATCTCTGCCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 ENSMUST00000195396.6 ENSMUST00000195751.2 |
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| 3UTR-3UTR TCA 90 bp | GTTTACAATAAAAGCCAAAAACCCAAGCCAGCACTGCCTGATGCAGGGTCAGGTCAAGCCAGCACTGCCTaGTGCAGGGTCAGGTGCTTT | + |
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Preference number: 2 (lower is better) Translates to: VYNKSQKPKPALPDAGSGQASTA*CRVRCF Trigger: AAAGCACCTGACCCTGCATCAGGCAGTGCTGGCTTG...ACCTGACCCTGCATCAGGCAGTGCTGGCTTGGGTTTTTGGCTTTTATTGTAAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 ENSMUST00000195396.6 ENSMUST00000195751.2 |
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| 3UTR-3UTR GCA 90 bp | CTTCACAGGCTGGCTGTTTACAATAAAAGCCAAAAACCCAAGCCAGCACTGCCTAACCCAAGCCAGCACTaGCTGATGCAGGGTCAGGTG | + |
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Preference number: 2 (lower is better) Translates to: LHRLAVYNKSQKPKPALPNPSQH*LMQGQV Trigger: CACCTGACCCTGCATCAGGCAGTGCTGGCTTGGGTT...AGGCAGTGCTGGCTTGGGTTTTTGGCTTTTATTGTAAACAGCCAGCCTGTGAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 ENSMUST00000195396.6 ENSMUST00000195751.2 |
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| 3UTR-3UTR GCA 90 bp | CTGAGGGTCCTAGTATGTCTTCTTAGTTCTGTGACTTGGAACCAAAGAGGGAGGGGCCTTGGAAAACCTTaGATCCAGCTCTTCCCCGGC | + |
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Preference number: 2 (lower is better) Translates to: LRVLVCLLSSVTWNQRGRGLGKP*IQLFPG Trigger: GCCGGGGAAGAGCTGGATGCAAGGTTTTCCAAGGCC...CCTCCCTCTTTGGTTCCAAGTCACAGAACTAAGAAGACATACTAGGACCCTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
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| 3UTR-3UTR GCA 90 bp | GCATCTGGTGGTCTTCAGTCCCAAGTGGAAGCGCTAAGGGTAGAGTCATATCAGCATGATAGGTCAGCGTaGTGGCCTGGGCAAATCTCT | + |
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Preference number: 2 (lower is better) Translates to: ASGGLQSQVEALRVESYQHDRSA*WPGQIS Trigger: AGAGATTTGCCCAGGCCAGCACGCTGACCTATCATG...CTGATATGACTCTACCCTTAGCGCTTCCACTTGGGACTGAAGACCACCAGATGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
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| 3UTR-3UTR CCA 90 bp | GACAGAGCACCAAGCAGTGCTTGGGAGGCAGCTCTCAGTGTTTGGTCCATGCTGACATGCGTCTTTAGTTaGTTGCACTGGGTAAATGCC | + |
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Preference number: 2 (lower is better) Translates to: DRAPSSAWEAALSVWSMLTCVFS*LHWVNA Trigger: GGCATTTACCCAGTGCAACCAACTAAAGACGCATGT...CAGCATGGACCAAACACTGAGAGCTGCCTCCCAAGCACTGCTTGGTGCTCTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195396.6 |
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| 3UTR-3UTR TCA 90 bp | CTTCACAGGCTGGCTGTTTACAATAAAAGCCAAAAACCCAAGCCAGCACTGCCTCTGATATGCAGACAGTaGGAGGGGAAGAGGGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: LHRLAVYNKSQKPKPALPLICRQ*EGKREQ Trigger: CTGCTCCCTCTTCCCCTCTCACTGTCTGCATATCAG...AGGCAGTGCTGGCTTGGGTTTTTGGCTTTTATTGTAAACAGCCAGCCTGTGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 ENSMUST00000195396.6 ENSMUST00000195751.2 |
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| 3UTR-3UTR TCA 90 bp | CTGAGGGTCCTAGTATGTCTTCTTAGTTCTGTGACTTGGAACCAAAGAGGGAGGCTGATATGCAGACAGTaGGAGGGGAAGAGGGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: LRVLVCLLSSVTWNQRGRLICRQ*EGKREQ Trigger: CTGCTCCCTCTTCCCCTCTCACTGTCTGCATATCAG...CCTCCCTCTTTGGTTCCAAGTCACAGAACTAAGAAGACATACTAGGACCCTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 ENSMUST00000195396.6 ENSMUST00000195751.2 |
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| 3UTR-3UTR TCA 90 bp | ATGGCAGAGATGAGAAACAGTCACCAGGACTTATCAGCAATGGAACTGACTGGGCTGATATGCAGACAGTaGGAGGGGAAGAGGGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: MAEMRNSHQDLSAMELTGLICRQ*EGKREQ Trigger: CTGCTCCCTCTTCCCCTCTCACTGTCTGCATATCAG...CCCAGTCAGTTCCATTGCTGATAAGTCCTGGTGACTGTTTCTCATCTCTGCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 ENSMUST00000195396.6 ENSMUST00000195751.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGCTCTCAGTGTTTGGTCCATGCTGAAATCAGCTACGAGGCTTCTCTATCAACTGCCCCAGCACATCTaGTTCAGCACAGCAAACTGG | + |
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Preference number: 2 (lower is better) Translates to: AALSVWSMLKSATRLLYQLPQHI*FSTANW Trigger: CCAGTTTGCTGTGCTGAATCAGATGTGCTGGGGCAG...TTGATAGAGAAGCCTCGTAGCTGATTTCAGCATGGACCAAACACTGAGAGCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192715.6 ENSMUST00000195396.6 |
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| 3UTR-3UTR GCA 90 bp | AGGAGCATCTGGTGGTCTTCAGTCCCAAGTGGAAGCGCTAAGGGTAGAGTCATATTGTGTATTCTCATGTaGCTTCGCAGGCTGCTGGCT | + |
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Preference number: 2 (lower is better) Translates to: RSIWWSSVPSGSAKGRVILCILM*LRRLLA Trigger: AGCCAGCAGCCTGCGAAGGCACATGAGAATACACAA...TATGACTCTACCCTTAGCGCTTCCACTTGGGACTGAAGACCACCAGATGCTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
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| 3UTR-3UTR CCA 90 bp | GGAGGATGTGGGGGACAGAGCCACTTTAGGTTACACAGGAGTCCTAGGCCAGTCTGTTCGCTTACAGCATaGTCATCTACACTGCAATCT | + |
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Preference number: 2 (lower is better) Translates to: GGCGGQSHFRLHRSPRPVCSLTA*SSTLQS Trigger: AGATTGCAGTGTAGATGACCATGCTGTAAGCGAACA...GACTGGCCTAGGACTCCTGTGTAACCTAAAGTGGCTCTGTCCCCCACATCCTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000195396.6 |
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| 3UTR-3UTR CCA 90 bp | GCATCTGGTGGTCTTCAGTCCCAAGTGGAAGCGCTAAGGGTAGAGTCATATCAGACATTGGCTTGGCCTTaGAAAACCTTGCATCCAGCT | + |
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Preference number: 2 (lower is better) Translates to: ASGGLQSQVEALRVESYQTLAWP*KTLHPA Trigger: AGCTGGATGCAAGGTTTTCCAAGGCCAAGCCAATGT...CTGATATGACTCTACCCTTAGCGCTTCCACTTGGGACTGAAGACCACCAGATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
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| 3UTR-3UTR CCA 90 bp | CTTCACAGGCTGGCTGTTTACAATAAAAGCCAAAAACCCAAGCCAGCACTGCCTACAGGCAGGAGCATCTaGTGGTCTTCAGTCCCAAGT | + |
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Preference number: 2 (lower is better) Translates to: LHRLAVYNKSQKPKPALPTGRSI*WSSVPS Trigger: ACTTGGGACTGAAGACCACCAGATGCTCCTGCCTGT...AGGCAGTGCTGGCTTGGGTTTTTGGCTTTTATTGTAAACAGCCAGCCTGTGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
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| 3UTR CAA 90 bp | CAAAGACAGAGCACCAAGCAGTGCTTGGGAGGCAGCTCTCAGTGTTaGGTCCATGCTGAAATCAGCTACGAGGCTTCTCTATCAAATATC | + |
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Preference number: 2 (lower is better) Translates to: QRQSTKQCLGGSSQC*VHAEISYEASLSNI Trigger: GATATTTGATAGAGAAGCCTCGTAGCTGATTTCAGCATGGACCAAACACTGAGAGCTGCCTCCCAAGCACTGCTTGGTGCTCTGTCTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192715.6 ENSMUST00000195396.6 |
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| 3UTR CAA 90 bp | AACGTCATTTCAAGTGCTTCTCAAAGACAGAGCACCAAGCAGTGCTaGGGAGGCAGCTCTCAGTGTTTGGTCCATGCTGAAATCAGCTAC | + |
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Preference number: 2 (lower is better) Translates to: NVISSASQRQSTKQC*GGSSQCLVHAEISY Trigger: GTAGCTGATTTCAGCATGGACCAAACACTGAGAGCTGCCTCCCAAGCACTGCTTGGTGCTCTGTCTTTGAGAAGCACTTGAAATGACGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192715.6 ENSMUST00000195396.6 |
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| 3UTR-3UTR TCA 90 bp | AGAAACAGTCACCAGGACTTATCAGCAATGGAACTGACTGGGAAACTGAACTTACAAGCCAGCACTGCCTaGTGCAGGGTCAGGTGCTTT | + |
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Preference number: 2 (lower is better) Translates to: RNSHQDLSAMELTGKLNLQASTA*CRVRCF Trigger: AAAGCACCTGACCCTGCATCAGGCAGTGCTGGCTTG...TAAGTTCAGTTTCCCAGTCAGTTCCATTGCTGATAAGTCCTGGTGACTGTTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 ENSMUST00000195396.6 ENSMUST00000195751.2 |
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| 3UTR-3UTR TCA 90 bp | AGCTTTCAGATGCTAGTTAGCAAGTTGGGGATTGAGTGGCTTGGTGCTGCTGTGGGTTTTTCCTCACCATaGTGCATGCGACTATGGAAG | + |
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Preference number: 2 (lower is better) Translates to: SFQMLVSKLGIEWLGAAVGFSSP*CMRLWK Trigger: CTTCCATAGTCGCATGCATCATGGTGAGGAAAAACC...CACAGCAGCACCAAGCCACTCAATCCCCAACTTGCTAACTAGCATCTGAAAGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000195396.6 |
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| 3UTR-3UTR TCA 90 bp | CAAGAACTGAGGGTCCTAGTATGTCTTCTTAGTTCTGTGACTTGGAACCAAAGATCTGATGCAGGAGACTaGCTGTCCGTGACAGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: QELRVLVCLLSSVTWNQRSDAGD*LSVTGR Trigger: CCTGCCTGTCACGGACAGTCAGTCTCCTGCATCAGA...TCTTTGGTTCCAAGTCACAGAACTAAGAAGACATACTAGGACCCTCAGTTCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
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| 3UTR-3UTR TCA 90 bp | AGGAGCATCTGGTGGTCTTCAGTCCCAAGTGGAAGCGCTAAGGGTAGAGTCATACTGGTTTCTGAGAACTaGAGGCCTTCTTCTTCTTTT | + |
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Preference number: 2 (lower is better) Translates to: RSIWWSSVPSGSAKGRVILVSEN*RPSSSF Trigger: AAAAGAAGAAGAAGGCCTTCAGTTCTCAGAAACCAG...TATGACTCTACCCTTAGCGCTTCCACTTGGGACTGAAGACCACCAGATGCTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
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| 3UTR-3UTR TCA 90 bp | ACCTTCCCGCAAGTGTTGCACATTGGCTTGGCCTTGGAAAACCTTGCATCCAGCGGTCAACTCAAGTTCTaGACTGTCATTTCCTTGAAT | + |
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Preference number: 2 (lower is better) Translates to: TFPQVLHIGLALENLASSGQLKF*TVISLN Trigger: ATTCAAGGAAATGACAGTTCAGAACTTGAGTTGACC...GCTGGATGCAAGGTTTTCCAAGGCCAAGCCAATGTGCAACACTTGCGGGAAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
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| 3UTR-3UTR TCA 90 bp | TGGTCTTCAGTCCCAAGTGGAAGCGCTAAGGGTAGAGTCATATCAGAAGGCTTCACCAGCTGGCATTTCTaGGCAAATCCTTTATCACAC | + |
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Preference number: 2 (lower is better) Translates to: WSSVPSGSAKGRVISEGFTSWHF*ANPLSH Trigger: GTGTGATAAAGGATTTGCTCAGAAATGCCAGCTGGT...GAAGCCTTCTGATATGACTCTACCCTTAGCGCTTCCACTTGGGACTGAAGACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
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| 3UTR-3UTR GCA 90 bp | ACAGTTTCCATACTGGTCCACAGGGCTTACAAACAGAAACACTTCGAAGTTGATCCTTCCCGCAAGTGTTaGACATTGGCTTGGCCTTGG | + |
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Preference number: 2 (lower is better) Translates to: TVSILVHRAYKQKHFEVDPSRKC*TLAWPW Trigger: CCAAGGCCAAGCCAATGTGCAACACTTGCGGGAAGG...ATCAACTTCGAAGTGTTTCTGTTTGTAAGCCCTGTGGACCAGTATGGAAACTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
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| 3UTR-3UTR GCA 90 bp | CAAGAACTGAGGGTCCTAGTATGTCTTCTTAGTTCTGTGACTTGGAACCAAAGACCTTCCCGCAAGTGTTaGACATTGGCTTGGCCTTGG | + |
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Preference number: 2 (lower is better) Translates to: QELRVLVCLLSSVTWNQRPSRKC*TLAWPW Trigger: CCAAGGCCAAGCCAATGTGCAACACTTGCGGGAAGG...TCTTTGGTTCCAAGTCACAGAACTAAGAAGACATACTAGGACCCTCAGTTCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
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| 3UTR-3UTR GCA 90 bp | ATGGCAGAGATGAGAAACAGTCACCAGGACTTATCAGCAATGGAACTGACTGGGGCCTGGGCAAATCTCTaGCCACATCTATCACAAACA | + |
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Preference number: 2 (lower is better) Translates to: MAEMRNSHQDLSAMELTGAWANL*PHLSQT Trigger: TGTTTGTGATAGATGTGGGCAGAGATTTGCCCAGGC...CCCAGTCAGTTCCATTGCTGATAAGTCCTGGTGACTGTTTCTCATCTCTGCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
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| 3UTR-3UTR TCA 90 bp | TCTCCAGTTAAGTTAGTCTCGCTGGTCATAATTTACCGTGAAAATGCTATAGCTCCTCAGCAGCGTGTCTaGTGCAGGAGACTGACTGTC | + |
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Preference number: 2 (lower is better) Translates to: SPVKLVSLVIIYRENAIAPQQRV*CRRLTV Trigger: GACAGTCAGTCTCCTGCATCAGACACGCTGCTGAGG...AGCTATAGCATTTTCACGGTAAATTATGACCAGCGAGACTAACTTAACTGGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
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| 3UTR-3UTR GCA 90 bp | GTCTCGCTGGTCATAATTTACCGTGAAAATGCTATAGCTTTAAGAAATGGGAAGAACCCAAGCCAGCACTaGCTGATGCAGGGTCAGGTG | + |
|
Preference number: 2 (lower is better) Translates to: VSLVIIYRENAIALRNGKNPSQH*LMQGQV Trigger: CACCTGACCCTGCATCAGGCAGTGCTGGCTTGGGTT...CTTCCCATTTCTTAAAGCTATAGCATTTTCACGGTAAATTATGACCAGCGAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 ENSMUST00000195396.6 ENSMUST00000195751.2 |
||
| 3UTR-3UTR GCA 90 bp | TCTCCAGTTAAGTTAGTCTCGCTGGTCATAATTTACCGTGAAAATGCTATAGCTAACCCAAGCCAGCACTaGCTGATGCAGGGTCAGGTG | + |
|
Preference number: 2 (lower is better) Translates to: SPVKLVSLVIIYRENAIANPSQH*LMQGQV Trigger: CACCTGACCCTGCATCAGGCAGTGCTGGCTTGGGTT...AGCTATAGCATTTTCACGGTAAATTATGACCAGCGAGACTAACTTAACTGGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 ENSMUST00000195396.6 ENSMUST00000195751.2 |
||
| 3UTR-3UTR GCA 90 bp | AAAATCAACTGCGGTTCCGAGTACCCATTCACCGTGGACCTCAGCAGCGTGTCTTTGACTGTAACAGTTTaGACAATATCTTGGGTTGGA | + |
|
Preference number: 2 (lower is better) Translates to: KINCGSEYPFTVDLSSVSLTVTV*TISWVG Trigger: TCCAACCCAAGATATTGTGCAAACTGTTACAGTCAA...AGACACGCTGCTGAGGTCCACGGTGAATGGGTACTCGGAACCGCAGTTGATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
||
| 3UTR-3UTR GCA 90 bp | TGGTCTTCAGTCCCAAGTGGAAGCGCTAAGGGTAGAGTCATATCAGAAGGCTTCTCCACTGTGTTTCCTTaGATGAATCTTGAGGTTGCT | + |
|
Preference number: 2 (lower is better) Translates to: WSSVPSGSAKGRVISEGFSTVFP*MNLEVA Trigger: AGCAACCTCAAGATTCATGCAAGGAAACACAGTGGA...GAAGCCTTCTGATATGACTCTACCCTTAGCGCTTCCACTTGGGACTGAAGACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
||
| 3UTR-3UTR CCA 90 bp | GTTTACAATAAAAGCCAAAAACCCAAGCCAGCACTGCCTGATGCAGGGTCAGGTGGTCGTTCTCCTGTATaGGATCGAAAGTGTTTGTTG | + |
|
Preference number: 2 (lower is better) Translates to: VYNKSQKPKPALPDAGSGGRSPV*DRKCLL Trigger: CAACAAACACTTTCGATCCCATACAGGAGAACGACC...ACCTGACCCTGCATCAGGCAGTGCTGGCTTGGGTTTTTGGCTTTTATTGTAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000195751.2 |
||
| 3UTR-3UTR TCA 90 bp | GTTTACAATAAAAGCCAAAAACCCAAGCCAGCACTGCCTGATGCAGGGTCAGGTCTGGTTTCTGAGAACTaGAGGCCTTCTTCTTCTTTT | + |
|
Preference number: 2 (lower is better) Translates to: VYNKSQKPKPALPDAGSGLVSEN*RPSSSF Trigger: AAAAGAAGAAGAAGGCCTTCAGTTCTCAGAAACCAG...ACCTGACCCTGCATCAGGCAGTGCTGGCTTGGGTTTTTGGCTTTTATTGTAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
||
| 3UTR-3UTR TCA 90 bp | GTTTGCACAATATCTTGGGTTGGAAAAGTATTTTCCACAACCGAGGTCAACTCACTCTGCCCTGGTTTCTaGGAACTGAAGGCCTTCTTC | + |
|
Preference number: 2 (lower is better) Translates to: VCTISWVGKVFSTTEVNSLCPGF*ELKAFF Trigger: GAAGAAGGCCTTCAGTTCTCAGAAACCAGGGCAGAG...TGAGTTGACCTCGGTTGTGGAAAATACTTTTCCAACCCAAGATATTGTGCAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
||
| 3UTR-3UTR GCA 90 bp | GTCATCTACACTGCAATCTGGATTTTTATCAGTACCAGAATGGACCTTTGTTTTAACCCAAGCCAGCACTaGCTGATGCAGGGTCAGGTG | + |
|
Preference number: 2 (lower is better) Translates to: VIYTAIWIFISTRMDLCFNPSQH*LMQGQV Trigger: CACCTGACCCTGCATCAGGCAGTGCTGGCTTGGGTT...AAAACAAAGGTCCATTCTGGTACTGATAAAAATCCAGATTGCAGTGTAGATGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
||
| 3UTR-3UTR CCA 90 bp | GTCTCGCTGGTCATAATTTACCGTGAAAATGCTATAGCTTTAAGAAATGGGAAGGGCAGGAGCATCTGGTaGTCTTCAGTCCCAAGTGGA | + |
|
Preference number: 2 (lower is better) Translates to: VSLVIIYRENAIALRNGKGRSIW*SSVPSG Trigger: TCCACTTGGGACTGAAGACCACCAGATGCTCCTGCC...CTTCCCATTTCTTAAAGCTATAGCATTTTCACGGTAAATTATGACCAGCGAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
||
| 3UTR-3UTR TCA 90 bp | AGCTTTCAGATGCTAGTTAGCAAGTTGGGGATTGAGTGGCTTGGTGCTGCTGTGTCCAAAACTGTCTTCTaGCCACTTAAAAACACCAAA | + |
|
Preference number: 2 (lower is better) Translates to: SFQMLVSKLGIEWLGAAVSKTVF*PLKNTK Trigger: TTTGGTGTTTTTAAGTGGTCAGAAGACAGTTTTGGA...CACAGCAGCACCAAGCCACTCAATCCCCAACTTGCTAACTAGCATCTGAAAGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000192715.6 ENSMUST00000195396.6 |
||
| 3UTR-3UTR GCA 90 bp | GTCTCGCTGGTCATAATTTACCGTGAAAATGCTATAGCTTTAAGAAATGGGAAGGGTACTGCACTGCTTTaGTCTGCCCTGGTTTCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: VSLVIIYRENAIALRNGKGTALL*SALVSE Trigger: CTCAGAAACCAGGGCAGAGCAAAGCAGTGCAGTACC...CTTCCCATTTCTTAAAGCTATAGCATTTTCACGGTAAATTATGACCAGCGAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
||
| 3UTR-3UTR GCA 90 bp | TCTCCAGTTAAGTTAGTCTCGCTGGTCATAATTTACCGTGAAAATGCTATAGCTGGTACTGCACTGCTTTaGTCTGCCCTGGTTTCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: SPVKLVSLVIIYRENAIAGTALL*SALVSE Trigger: CTCAGAAACCAGGGCAGAGCAAAGCAGTGCAGTACC...AGCTATAGCATTTTCACGGTAAATTATGACCAGCGAGACTAACTTAACTGGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
||
| 3UTR-3UTR GCA 90 bp | ACAGTTTCCATACTGGTCCACAGGGCTTACAAACAGAAACACTTCGAAGTTGATGCCTGGGCAAATCTCTaGCCACATCTATCACAAACA | + |
|
Preference number: 2 (lower is better) Translates to: TVSILVHRAYKQKHFEVDAWANL*PHLSQT Trigger: TGTTTGTGATAGATGTGGGCAGAGATTTGCCCAGGC...ATCAACTTCGAAGTGTTTCTGTTTGTAAGCCCTGTGGACCAGTATGGAAACTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
||
| 3UTR-3UTR CCA 90 bp | AGAAACAGTCACCAGGACTTATCAGCAATGGAACTGACTGGGAAACTGAACTTAACATTGGCTTGGCCTTaGAAAACCTTGCATCCAGCT | + |
|
Preference number: 2 (lower is better) Translates to: RNSHQDLSAMELTGKLNLTLAWP*KTLHPA Trigger: AGCTGGATGCAAGGTTTTCCAAGGCCAAGCCAATGT...TAAGTTCAGTTTCCCAGTCAGTTCCATTGCTGATAAGTCCTGGTGACTGTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
||
| 3UTR-3UTR CCA 90 bp | AAGTTTATTGTACAAAGGTGGTATTTCATACTCTCTCCAGTTAAGTTAGTCTCGGATAGGTCAGCGTGCTaGCCTGGGCAAATCTCTGCC | + |
|
Preference number: 2 (lower is better) Translates to: KFIVQRWYFILSPVKLVSDRSAC*PGQISA Trigger: GGCAGAGATTTGCCCAGGCCAGCACGCTGACCTATC...CGAGACTAACTTAACTGGAGAGAGTATGAAATACCACCTTTGTACAATAAACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTATTGTACAAAGGTGGTATTTCATACTCTCTCCAGTTAAGTTAGTCTCGCTGGGCAGGAGCATCTGGTaGTCTTCAGTCCCAAGTGGA | + |
|
Preference number: 2 (lower is better) Translates to: FIVQRWYFILSPVKLVSLGRSIW*SSVPSG Trigger: TCCACTTGGGACTGAAGACCACCAGATGCTCCTGCC...CAGCGAGACTAACTTAACTGGAGAGAGTATGAAATACCACCTTTGTACAATAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
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| 3UTR-3UTR TCA 90 bp | GTTTACAATAAAAGCCAAAAACCCAAGCCAGCACTGCCTGATGCAGGGTCAGGTTCCAAAACTGTCTTCTaGCCACTTAAAAACACCAAA | + |
|
Preference number: 2 (lower is better) Translates to: VYNKSQKPKPALPDAGSGSKTVF*PLKNTK Trigger: TTTGGTGTTTTTAAGTGGTCAGAAGACAGTTTTGGA...ACCTGACCCTGCATCAGGCAGTGCTGGCTTGGGTTTTTGGCTTTTATTGTAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 ENSMUST00000195396.6 ENSMUST00000195751.2 |
||
| 3UTR-3UTR GCA 90 bp | GTTTACAATAAAAGCCAAAAACCCAAGCCAGCACTGCCTGATGCAGGGTCAGGTCATGGTCATCTACACTaGAATCTGGATTTTTATCAG | + |
|
Preference number: 2 (lower is better) Translates to: VYNKSQKPKPALPDAGSGHGHLH*NLDFYQ Trigger: CTGATAAAAATCCAGATTGCAGTGTAGATGACCATG...ACCTGACCCTGCATCAGGCAGTGCTGGCTTGGGTTTTTGGCTTTTATTGTAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
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| 3UTR-3UTR CCA 90 bp | GTTTACAATAAAAGCCAAAAACCCAAGCCAGCACTGCCTGATGCAGGGTCAGGTTATAGCTTTAAGAAATaGGAAGACACCTGCAGTTTG | + |
|
Preference number: 2 (lower is better) Translates to: VYNKSQKPKPALPDAGSGYSFKK*EDTCSL Trigger: CAAACTGCAGGTGTCTTCCCATTTCTTAAAGCTATA...ACCTGACCCTGCATCAGGCAGTGCTGGCTTGGGTTTTTGGCTTTTATTGTAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 ENSMUST00000195396.6 ENSMUST00000195751.2 |
||
| 3UTR-3UTR CCA 90 bp | TCTCCAGTTAAGTTAGTCTCGCTGGTCATAATTTACCGTGAAAATGCTATAGCTTGCTTTGCTCTGCCCTaGTTTCTGAGAACTGAAGGC | + |
|
Preference number: 2 (lower is better) Translates to: SPVKLVSLVIIYRENAIACFALP*FLRTEG Trigger: GCCTTCAGTTCTCAGAAACCAGGGCAGAGCAAAGCA...AGCTATAGCATTTTCACGGTAAATTATGACCAGCGAGACTAACTTAACTGGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
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| 3UTR-3UTR CCA 90 bp | GGGTTTTTCCTCACCATGATGCATGCGACTATGGAAGACCAGCTGGCATTTCTGCACAATATCTTGGGTTaGAAAAGTATTTTCCACAAC | + |
|
Preference number: 2 (lower is better) Translates to: GFFLTMMHATMEDQLAFLHNILG*KSIFHN Trigger: GTTGTGGAAAATACTTTTCCAACCCAAGATATTGTG...CAGAAATGCCAGCTGGTCTTCCATAGTCGCATGCATCATGGTGAGGAAAAACCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
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| 3UTR-3UTR TCA 90 bp | ATAATTTACCGTGAAAATGCTATAGCTTTAAGAAATGGGAAGACACCTGCAGTTGGTTTAGGGTTTGCCTaGACTGAGTCCGTGGAGACT | + |
|
Preference number: 2 (lower is better) Translates to: IIYRENAIALRNGKTPAVGLGFA*TESVET Trigger: AGTCTCCACGGACTCAGTTCAGGCAAACCCTAAACC...AACTGCAGGTGTCTTCCCATTTCTTAAAGCTATAGCATTTTCACGGTAAATTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
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| 3UTR-3UTR TCA 90 bp | ATAATTTACCGTGAAAATGCTATAGCTTTAAGAAATGGGAAGACACCTGCAGTTCTCTGCCCTGGTTTCTaGGAACTGAAGGCCTTCTTC | + |
|
Preference number: 2 (lower is better) Translates to: IIYRENAIALRNGKTPAVLCPGF*ELKAFF Trigger: GAAGAAGGCCTTCAGTTCTCAGAAACCAGGGCAGAG...AACTGCAGGTGTCTTCCCATTTCTTAAAGCTATAGCATTTTCACGGTAAATTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
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| 3UTR-3UTR GCA 90 bp | TTTATTGTACAAAGGTGGTATTTCATACTCTCTCCAGTTAAGTTAGTCTCGCTGTTGTGTATTCTCATGTaGCTTCGCAGGCTGCTGGCT | + |
|
Preference number: 2 (lower is better) Translates to: FIVQRWYFILSPVKLVSLLCILM*LRRLLA Trigger: AGCCAGCAGCCTGCGAAGGCACATGAGAATACACAA...CAGCGAGACTAACTTAACTGGAGAGAGTATGAAATACCACCTTTGTACAATAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
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| 3UTR-3UTR GCA 90 bp | TTTATTGTACAAAGGTGGTATTTCATACTCTCTCCAGTTAAGTTAGTCTCGCTGCCTCACCATGATGCATaGGACTATGGAAGACCAGCT | + |
|
Preference number: 2 (lower is better) Translates to: FIVQRWYFILSPVKLVSLPHHDA*DYGRPA Trigger: AGCTGGTCTTCCATAGTCGCATGCATCATGGTGAGG...CAGCGAGACTAACTTAACTGGAGAGAGTATGAAATACCACCTTTGTACAATAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
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| 3UTR-3UTR CCA 90 bp | AGAAACAGTCACCAGGACTTATCAGCAATGGAACTGACTGGGAAACTGAACTTAGTTCTCCAGCTCATATaGACTCTTTACACTGGCTAT | + |
|
Preference number: 2 (lower is better) Translates to: RNSHQDLSAMELTGKLNLVLQLI*TLYTGY Trigger: ATAGCCAGTGTAAAGAGTCCATATGAGCTGGAGAAC...TAAGTTCAGTTTCCCAGTCAGTTCCATTGCTGATAAGTCCTGGTGACTGTTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
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| 3UTR-3UTR CCA 90 bp | CTGAGGGTCCTAGTATGTCTTCTTAGTTCTGTGACTTGGAACCAAAGAGGGAGGATCTACACTGCAATCTaGATTTTTATCAGTACCAGA | + |
|
Preference number: 2 (lower is better) Translates to: LRVLVCLLSSVTWNQRGRIYTAI*IFISTR Trigger: TCTGGTACTGATAAAAATCCAGATTGCAGTGTAGAT...CCTCCCTCTTTGGTTCCAAGTCACAGAACTAAGAAGACATACTAGGACCCTCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
||
| 3UTR-3UTR TCA 90 bp | ACAGTTTCCATACTGGTCCACAGGGCTTACAAACAGAAACACTTCGAAGTTGATTGTCATTTCCTTGAATaGTTTGCTCTACTACAGGTG | + |
|
Preference number: 2 (lower is better) Translates to: TVSILVHRAYKQKHFEVDCHFLE*FALLQV Trigger: CACCTGTAGTAGAGCAAATCATTCAAGGAAATGACA...ATCAACTTCGAAGTGTTTCTGTTTGTAAGCCCTGTGGACCAGTATGGAAACTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
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| 3UTR-3UTR TCA 90 bp | AAGTTTATTGTACAAAGGTGGTATTTCATACTCTCTCCAGTTAAGTTAGTCTCGGTGTGTTTCCGAGAATaGGTGATAAGAGAGCTAGAG | + |
|
Preference number: 2 (lower is better) Translates to: KFIVQRWYFILSPVKLVSVCFRE*VIRELE Trigger: CTCTAGCTCTCTTATCACTCATTCTCGGAAACACAC...CGAGACTAACTTAACTGGAGAGAGTATGAAATACCACCTTTGTACAATAAACTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
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| 3UTR-3UTR GCA 90 bp | ATAATTTACCGTGAAAATGCTATAGCTTTAAGAAATGGGAAGACACCTGCAGTTAAATGGGAAGACACCTaGAGTTTGCAAGAACTGAGG | + |
|
Preference number: 2 (lower is better) Translates to: IIYRENAIALRNGKTPAVKWEDT*SLQELR Trigger: CCTCAGTTCTTGCAAACTGCAGGTGTCTTCCCATTT...AACTGCAGGTGTCTTCCCATTTCTTAAAGCTATAGCATTTTCACGGTAAATTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 ENSMUST00000195396.6 ENSMUST00000195751.2 |
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| 3UTR-3UTR CCA 90 bp | CAAGAACTGAGGGTCCTAGTATGTCTTCTTAGTTCTGTGACTTGGAACCAAAGATTATCAGTACCAGAATaGACCTTTGTTTTATGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: QELRVLVCLLSSVTWNQRLSVPE*TFVLCF Trigger: GAAGCATAAAACAAAGGTCCATTCTGGTACTGATAA...TCTTTGGTTCCAAGTCACAGAACTAAGAAGACATACTAGGACCCTCAGTTCTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTATTGTACAAAGGTGGTATTTCATACTCTCTCCAGTTAAGTTAGTCTCGCTGTGTTCGCTTACAGCATaGTCATCTACACTGCAATCT | + |
|
Preference number: 2 (lower is better) Translates to: FIVQRWYFILSPVKLVSLCSLTA*SSTLQS Trigger: AGATTGCAGTGTAGATGACCATGCTGTAAGCGAACA...CAGCGAGACTAACTTAACTGGAGAGAGTATGAAATACCACCTTTGTACAATAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
||
| 3UTR-3UTR TCA 90 bp | GTCATCTACACTGCAATCTGGATTTTTATCAGTACCAGAATGGACCTTTGTTTTTGTCATTTCCTTGAATaGTTTGCTCTACTACAGGTG | + |
|
Preference number: 2 (lower is better) Translates to: VIYTAIWIFISTRMDLCFCHFLE*FALLQV Trigger: CACCTGTAGTAGAGCAAATCATTCAAGGAAATGACA...AAAACAAAGGTCCATTCTGGTACTGATAAAAATCCAGATTGCAGTGTAGATGAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
||
| 3UTR-3UTR GCA 90 bp | AAGTTTATTGTACAAAGGTGGTATTTCATACTCTCTCCAGTTAAGTTAGTCTCGTCCACTGTGTTTCCTTaGATGAATCTTGAGGTTGCT | + |
|
Preference number: 2 (lower is better) Translates to: KFIVQRWYFILSPVKLVSSTVFP*MNLEVA Trigger: AGCAACCTCAAGATTCATGCAAGGAAACACAGTGGA...CGAGACTAACTTAACTGGAGAGAGTATGAAATACCACCTTTGTACAATAAACTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
||
| 3UTR-3UTR CCA 90 bp | AAGTTTATTGTACAAAGGTGGTATTTCATACTCTCTCCAGTTAAGTTAGTCTCGGTTCTCCAGCTCATATaGACTCTTTACACTGGCTAT | + |
|
Preference number: 2 (lower is better) Translates to: KFIVQRWYFILSPVKLVSVLQLI*TLYTGY Trigger: ATAGCCAGTGTAAAGAGTCCATATGAGCTGGAGAAC...CGAGACTAACTTAACTGGAGAGAGTATGAAATACCACCTTTGTACAATAAACTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
||
| 3UTR-3UTR CCA 90 bp | AAGTTTATTGTACAAAGGTGGTATTTCATACTCTCTCCAGTTAAGTTAGTCTCGTATAGCTTTAAGAAATaGGAAGACACCTGCAGTTTG | + |
|
Preference number: 2 (lower is better) Translates to: KFIVQRWYFILSPVKLVSYSFKK*EDTCSL Trigger: CAAACTGCAGGTGTCTTCCCATTTCTTAAAGCTATA...CGAGACTAACTTAACTGGAGAGAGTATGAAATACCACCTTTGTACAATAAACTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 ENSMUST00000195396.6 ENSMUST00000195751.2 |
||
| 3UTR-3UTR CCA 90 bp | AAGTTTATTGTACAAAGGTGGTATTTCATACTCTCTCCAGTTAAGTTAGTCTCGCACAATATCTTGGGTTaGAAAAGTATTTTCCACAAC | + |
|
Preference number: 2 (lower is better) Translates to: KFIVQRWYFILSPVKLVSHNILG*KSIFHN Trigger: GTTGTGGAAAATACTTTTCCAACCCAAGATATTGTG...CGAGACTAACTTAACTGGAGAGAGTATGAAATACCACCTTTGTACAATAAACTT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
||
| 3UTR CCA 72 bp | GGTGCTGCTGTGTTGTTAGGGGCTGTGCTGCTCGCCTaGGGAATGCGGGAGGAGGATGTGGGGGACAGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: GAAVLLGAVLLA*GMREEDVGDRA Trigger: GGCTCTGTCCCCCACATCCTCCTCCCGCATTCCCCAGGCGAGCAGCACAGCCCCTAACAACACAGCAGCACC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000192715.6 ENSMUST00000195396.6 |
||
| 3UTR TCA 72 bp | AGGGGAAGAGGGAGCAGGCTGGAGGACGGGCGATGCTaGACTCGCTACACCCAGGGGAACGGAAAGGACACT | + |
|
Preference number: 3 (lower is better) Translates to: RGRGSRLEDGRC*TRYTQGNGKDT Trigger: AGTGTCCTTTCCGTTCCCCTGGGTGTAGCGAGTTCAGCATCGCCCGTCCTCCAGCCTGCTCCCTCTTCCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 ENSMUST00000195396.6 ENSMUST00000195751.2 |
||
| 3UTR CCA 72 bp | GATATGCAGACAGTGAGAGGGGAAGAGGGAGCAGGCTaGAGGACGGGCGATGCTGAACTCGCTACACCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: DMQTVRGEEGAG*RTGDAELATPR Trigger: CCTGGGTGTAGCGAGTTCAGCATCGCCCGTCCTCCAGCCTGCTCCCTCTTCCCCTCTCACTGTCTGCATATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 ENSMUST00000195396.6 ENSMUST00000195751.2 |
||
| 3UTR TCA 72 bp | ACCGTGGACCTCAGCAGCGTGTCTGATGCAGGAGACTaGCTGTCCGTGACAGGCAGGAGCATCTGGTGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: TVDLSSVSDAGD*LSVTGRSIWWS Trigger: AGACCACCAGATGCTCCTGCCTGTCACGGACAGTCAGTCTCCTGCATCAGACACGCTGCTGAGGTCCACGGT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
||
| 3UTR TCA 72 bp | CGAGTACCCATTCACCGTGGACCTCAGCAGCGTGTCTaGTGCAGGAGACTGACTGTCCGTGACAGGCAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: RVPIHRGPQQRV*CRRLTVRDRQE Trigger: CTCCTGCCTGTCACGGACAGTCAGTCTCCTGCATCAGACACGCTGCTGAGGTCCACGGTGAATGGGTACTCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
||
| 3UTR CCA 72 bp | ACACCTTCCCGCAAGTGTTGCACATTGGCTTGGCCTTaGAAAACCTTGCATCCAGCTCTTCCCCGGCGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: TPSRKCCTLAWP*KTLHPALPRRS Trigger: AGAACGCCGGGGAAGAGCTGGATGCAAGGTTTTCCAAGGCCAAGCCAATGTGCAACACTTGCGGGAAGGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTGGTGCTGCTGTGTTGTTAGGGGCTGTGCTGCTCGCCTGGGGAATGCGGGAGAAGAAGACAGGCCTGTaGATTCAATTCGATGTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: LGAAVLLGAVLLAWGMREKKTGL*IQFDVS Trigger: GGAAACATCGAATTGAATCAACAGGCCTGTCTTCTT...CTCCCGCATTCCCCAGGCGAGCAGCACAGCCCCTAACAACACAGCAGCACCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195396.6 |
||
| 3UTR CCA 72 bp | CTCCAGTGTGTCTGCGGACATGATAGGTCAGCGTGCTaGCCTGGGCAAATCTCTGCCCACATCTATCACAAA | + |
|
Preference number: 3 (lower is better) Translates to: LQCVCGHDRSAC*PGQISAHIYHK Trigger: TTTGTGATAGATGTGGGCAGAGATTTGCCCAGGCCAGCACGCTGACCTATCATGTCCGCAGACACACTGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
||
| 3UTR CCA 72 bp | GGAATAATTCCACAGACGCGCTCTCTAGAACGTCACTaGGGTACTGCACTGCTTTGCTCTGCCCTGGTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: GIIPQTRSLERH*GTALLCSALVS Trigger: AGAAACCAGGGCAGAGCAAAGCAGTGCAGTACCCCAGTGACGTTCTAGAGAGCGCGTCTGTGGAATTATTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
||
| 3UTR CCA 72 bp | GCACCAAGCAGTGCTTGGGAGGCAGCTCTCAGTGTTTaGTCCATGCTGAAATCAGCTACGAGGCTTCTCTAT | + |
|
Preference number: 3 (lower is better) Translates to: APSSAWEAALSV*SMLKSATRLLY Trigger: ATAGAGAAGCCTCGTAGCTGATTTCAGCATGGACCAAACACTGAGAGCTGCCTCCCAAGCACTGCTTGGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192715.6 ENSMUST00000195396.6 |
||
| 3UTR-3UTR CAA 90 bp | AGGAGCATCTGGTGGTCTTCAGTCCCAAGTGGAAGCGCTAAGGGTAGAGTCATACACATTGGCTTGGCCTaGGAAAACCTTGCATCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: RSIWWSSVPSGSAKGRVIHIGLA*ENLASS Trigger: GCTGGATGCAAGGTTTTCCAAGGCCAAGCCAATGTG...TATGACTCTACCCTTAGCGCTTCCACTTGGGACTGAAGACCACCAGATGCTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
||
| 3UTR TCA 72 bp | CACTGCCTGATGCAGGGTCAGGTGCTTTCACTTCCGTaGACAAAGACTAATGGGCTCACGGCTCAAATGAGT | + |
|
Preference number: 3 (lower is better) Translates to: HCLMQGQVLSLP*TKTNGLTAQMS Trigger: ACTCATTTGAGCCGTGAGCCCATTAGTCTTTGTTCACGGAAGTGAAAGCACCTGACCCTGCATCAGGCAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 ENSMUST00000195396.6 ENSMUST00000195751.2 |
||
| 3UTR CCA 72 bp | AGCTTTCAGATGCTAGTTAGCAAGTTGGGGATTGAGTaGCTTGGTGCTGCTGTGTTGTTAGGGGCTGTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: SFQMLVSKLGIE*LGAAVLLGAVL Trigger: CAGCACAGCCCCTAACAACACAGCAGCACCAAGCCACTCAATCCCCAACTTGCTAACTAGCATCTGAAAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000192715.6 ENSMUST00000195396.6 |
||
| 3UTR-3UTR CAA 90 bp | CTTCACAGGCTGGCTGTTTACAATAAAAGCCAAAAACCCAAGCCAGCACTGCCTGAAGACACCTGCAGTTaGCAAGAACTGAGGGTCCTA | + |
|
Preference number: 3 (lower is better) Translates to: LHRLAVYNKSQKPKPALPEDTCS*QELRVL Trigger: TAGGACCCTCAGTTCTTGCAAACTGCAGGTGTCTTC...AGGCAGTGCTGGCTTGGGTTTTTGGCTTTTATTGTAAACAGCCAGCCTGTGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 ENSMUST00000195396.6 ENSMUST00000195751.2 |
||
| 3UTR GCA 72 bp | CCGAGAATGAGTGATAAGAGAGCTAGAGACAGCAAATaGCTTTCCGCAGGTGTCGCACACATAAGGCTTTTC | + |
|
Preference number: 3 (lower is better) Translates to: PRMSDKRARDSK*LSAGVAHIRLF Trigger: GAAAAGCCTTATGTGTGCGACACCTGCGGAAAGGCATTTGCTGTCTCTAGCTCTCTTATCACTCATTCTCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
||
| 3UTR CCA 72 bp | GCCCCAGCACATCTGATTCAGCACAGCAAACTGGAGTaGGCATGGGTACTCTTATTAAACTCCAATCTGACA | + |
|
Preference number: 3 (lower is better) Translates to: APAHLIQHSKLE*AWVLLLNSNLT Trigger: TGTCAGATTGGAGTTTAATAAGAGTACCCATGCCCACTCCAGTTTGCTGTGCTGAATCAGATGTGCTGGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192715.6 ENSMUST00000195396.6 |
||
| 3UTR-3UTR CAA 90 bp | CAAGAACTGAGGGTCCTAGTATGTCTTCTTAGTTCTGTGACTTGGAACCAAAGAACCTTCCCGCAAGTGTaGCACATTGGCTTGGCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: QELRVLVCLLSSVTWNQRTFPQV*HIGLAL Trigger: CAAGGCCAAGCCAATGTGCAACACTTGCGGGAAGGT...TCTTTGGTTCCAAGTCACAGAACTAAGAAGACATACTAGGACCCTCAGTTCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTCACAGGCTGGCTGTTTACAATAAAAGCCAAAAACCCAAGCCAGCACTGCCTTGGGATCGAAAGTGTTaGTTGAGCTCTCCTGAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: LHRLAVYNKSQKPKPALPWDRKC*LSSPEE Trigger: TTCCTCAGGAGAGCTCAACAAACACTTTCGATCCCA...AGGCAGTGCTGGCTTGGGTTTTTGGCTTTTATTGTAAACAGCCAGCCTGTGAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000195751.2 |
||
| 3UTR-3UTR CAA 90 bp | GGTAAAGAACTTACCGCAGGGATTCTCTGTGTTAGAATGACTCCCAGATTCTCAGAAGACACCTGCAGTTaGCAAGAACTGAGGGTCCTA | + |
|
Preference number: 3 (lower is better) Translates to: GKELTAGILCVRMTPRFSEDTCS*QELRVL Trigger: TAGGACCCTCAGTTCTTGCAAACTGCAGGTGTCTTC...TGAGAATCTGGGAGTCATTCTAACACAGAGAATCCCTGCGGTAAGTTCTTTACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192715.6 ENSMUST00000195396.6 |
||
| 3UTR-3UTR CAA 90 bp | GCATCTGGTGGTCTTCAGTCCCAAGTGGAAGCGCTAAGGGTAGAGTCATATCAGTTTGACTGTAACAGTTaGCACAATATCTTGGGTTGG | + |
|
Preference number: 3 (lower is better) Translates to: ASGGLQSQVEALRVESYQFDCNS*HNILGW Trigger: CCAACCCAAGATATTGTGCAAACTGTTACAGTCAAA...CTGATATGACTCTACCCTTAGCGCTTCCACTTGGGACTGAAGACCACCAGATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTCACAGGCTGGCTGTTTACAATAAAAGCCAAAAACCCAAGCCAGCACTGCCTTGCGTCTTTAGTTGGTaGCACTGGGTAAATGCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: LHRLAVYNKSQKPKPALPCVFSW*HWVNAF Trigger: AAAGGCATTTACCCAGTGCAACCAACTAAAGACGCA...AGGCAGTGCTGGCTTGGGTTTTTGGCTTTTATTGTAAACAGCCAGCCTGTGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
||
| 3UTR GCA 72 bp | GCTGAAATCAGCTACGAGGCTTCTCTATCAAATATCTaGCCCAGCACATCTGATTCAGCACAGCAAACTGGA | + |
|
Preference number: 3 (lower is better) Translates to: AEISYEASLSNI*PSTSDSAQQTG Trigger: TCCAGTTTGCTGTGCTGAATCAGATGTGCTGGGGCAGATATTTGATAGAGAAGCCTCGTAGCTGATTTCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192715.6 ENSMUST00000195396.6 |
||
| 3UTR-3UTR CAA 90 bp | ACAGTTTCCATACTGGTCCACAGGGCTTACAAACAGAAACACTTCGAAGTTGATGTGTTGCACATTGGCTaGGCCTTGGAAAACCTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: TVSILVHRAYKQKHFEVDVLHIG*ALENLA Trigger: TGCAAGGTTTTCCAAGGCCAAGCCAATGTGCAACAC...ATCAACTTCGAAGTGTTTCTGTTTGTAAGCCCTGTGGACCAGTATGGAAACTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
||
| 3UTR-3UTR CAA 90 bp | GGTAAAGAACTTACCGCAGGGATTCTCTGTGTTAGAATGACTCCCAGATTCTCATGCGTCTTTAGTTGGTaGCACTGGGTAAATGCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: GKELTAGILCVRMTPRFSCVFSW*HWVNAF Trigger: AAAGGCATTTACCCAGTGCAACCAACTAAAGACGCA...TGAGAATCTGGGAGTCATTCTAACACAGAGAATCCCTGCGGTAAGTTCTTTACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195396.6 |
||
| 3UTR TCA 72 bp | ACTGCACTGCTTTGCTCTGCCCTGGTTTCTGAGAACTaGAGGCCTTCTTCTTCTTTTTACTTTGAGACGATT | + |
|
Preference number: 3 (lower is better) Translates to: TALLCSALVSEN*RPSSSFYFETI Trigger: AATCGTCTCAAAGTAAAAAGAAGAAGAAGGCCTTCAGTTCTCAGAAACCAGGGCAGAGCAAAGCAGTGCAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
||
| 3UTR GCA 72 bp | CGGAGTCTTGTTCGCTTACAGCATGGTCATCTACACTaGAATCTGGATTTTTATCAGTACCAGAATGGACCT | + |
|
Preference number: 3 (lower is better) Translates to: RSLVRLQHGHLH*NLDFYQYQNGP Trigger: AGGTCCATTCTGGTACTGATAAAAATCCAGATTGCAGTGTAGATGACCATGCTGTAAGCGAACAAGACTCCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCTCGCTGGTCATAATTTACCGTGAAAATGCTATAGCTTTAAGAAATGGGAAGGTGTTGCACATTGGCTaGGCCTTGGAAAACCTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: VSLVIIYRENAIALRNGKVLHIG*ALENLA Trigger: TGCAAGGTTTTCCAAGGCCAAGCCAATGTGCAACAC...CTTCCCATTTCTTAAAGCTATAGCATTTTCACGGTAAATTATGACCAGCGAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
||
| 3UTR CCA 72 bp | GGACTTCTCTGTACGGAGTCTTGTTCGCTTACAGCATaGTCATCTACACTGCAATCTGGATTTTTATCAGTA | + |
|
Preference number: 3 (lower is better) Translates to: GLLCTESCSLTA*SSTLQSGFLSV Trigger: TACTGATAAAAATCCAGATTGCAGTGTAGATGACCATGCTGTAAGCGAACAAGACTCCGTACAGAGAAGTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGTTTATTGTACAAAGGTGGTATTTCATACTCTCTCCAGTTAAGTTAGTCTCGCACATTGGCTTGGCCTaGGAAAACCTTGCATCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: KFIVQRWYFILSPVKLVSHIGLA*ENLASS Trigger: GCTGGATGCAAGGTTTTCCAAGGCCAAGCCAATGTG...CGAGACTAACTTAACTGGAGAGAGTATGAAATACCACCTTTGTACAATAAACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
||
| 3UTR-3UTR CAA 90 bp | CAAGAACTGAGGGTCCTAGTATGTCTTCTTAGTTCTGTGACTTGGAACCAAAGATTTGACTGTAACAGTTaGCACAATATCTTGGGTTGG | + |
|
Preference number: 3 (lower is better) Translates to: QELRVLVCLLSSVTWNQRFDCNS*HNILGW Trigger: CCAACCCAAGATATTGTGCAAACTGTTACAGTCAAA...TCTTTGGTTCCAAGTCACAGAACTAAGAAGACATACTAGGACCCTCAGTTCTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
||
| 3UTR CCA 72 bp | TTGTTCGCTTACAGCATGGTCATCTACACTGCAATCTaGATTTTTATCAGTACCAGAATGGACCTTTGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: LFAYSMVIYTAI*IFISTRMDLCF Trigger: AAAACAAAGGTCCATTCTGGTACTGATAAAAATCCAGATTGCAGTGTAGATGACCATGCTGTAAGCGAACAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
||
| 3UTR TCA 72 bp | AAAACTGTTCATTATATGCTTGGATTAATGCAGCTGTaGTTTAAACATAGCCCCTCCACTTTGGCAAACTTG | + |
|
Preference number: 3 (lower is better) Translates to: KTVHYMLGLMQL*FKHSPSTLANL Trigger: CAAGTTTGCCAAAGTGGAGGGGCTATGTTTAAATCACAGCTGCATTAATCCAAGCATATAATGAACAGTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000192715.6 ENSMUST00000195396.6 |
||
| 3UTR GCA 72 bp | AATATATATATATATATTCCAGAACGTCATTTCAAGTaGTTCTCAAAGACAGAGCACCAAGCAGTGCTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: NIYIYIPERHFK*FSKTEHQAVLG Trigger: CCCAAGCACTGCTTGGTGCTCTGTCTTTGAGAAGCACTTGAAATGACGTTCTGGAATATATATATATATATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192715.6 ENSMUST00000195396.6 |
||
| CDS-3UTR TCA 90 bp | CTTGGTGCTGCTGTGTTGTTAGGGGCTGTGCTGCTCGCCTGGGGAATGCGGGAGGTGTGTTTCCGAGAATaGGTGATAAGAGAGCTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LGAAVLLGAVLLAWGMREVCFRE*VIRELE Trigger: CTCTAGCTCTCTTATCACTCATTCTCGGAAACACAC...CTCCCGCATTCCCCAGGCGAGCAGCACAGCCCCTAACAACACAGCAGCACCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192715.6 |
||
| CDS-3UTR GCA 90 bp | GACAGAGCACCAAGCAGTGCTTGGGAGGCAGCTCTCAGTGTTTGGTCCATGCTGCATGATAGGTCAGCGTaGTGGCCTGGGCAAATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: DRAPSSAWEAALSVWSMLHDRSA*WPGQIS Trigger: AGAGATTTGCCCAGGCCAGCACGCTGACCTATCATG...CAGCATGGACCAAACACTGAGAGCTGCCTCCCAAGCACTGCTTGGTGCTCTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192715.6 |
||
| CDS-3UTR GCA 90 bp | CTTGGTGCTGCTGTGTTGTTAGGGGCTGTGCTGCTCGCCTGGGGAATGCGGGAGAGTCTCTCTAAAAGGTaGTCACAGTGGTGTGAATAC | + |
|
Preference number: 4 (lower is better) Translates to: LGAAVLLGAVLLAWGMRESLSKR*SQWCEY Trigger: GTATTCACACCACTGTGAGCACCTTTTAGAGAGACT...CTCCCGCATTCCCCAGGCGAGCAGCACAGCCCCTAACAACACAGCAGCACCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000192715.6 ENSMUST00000195396.6 |
||
| CDS-3UTR TCA 90 bp | TCCCTCCGACAGTTTCCATACTGGTCCACAGGGCTTACAAACAGAAACACTTCGTCTGATGCAGGAGACTaGCTGTCCGTGACAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLRQFPYWSTGLTNRNTSSDAGD*LSVTGR Trigger: CCTGCCTGTCACGGACAGTCAGTCTCCTGCATCAGA...CGAAGTGTTTCTGTTTGTAAGCCCTGTGGACCAGTATGGAAACTGTCGGAGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 |
||
| CDS-3UTR TCA 90 bp | AGCTTTCAGATGCTAGTTAGCAAGTTGGGGATTGAGTGGCTTGGTGCTGCTGTGCCTCAGCAGCGTGTCTaGTGCAGGAGACTGACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SFQMLVSKLGIEWLGAAVPQQRV*CRRLTV Trigger: GACAGTCAGTCTCCTGCATCAGACACGCTGCTGAGG...CACAGCAGCACCAAGCCACTCAATCCCCAACTTGCTAACTAGCATCTGAAAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192715.6 |
||
| CDS-3UTR CCA 90 bp | ACAATAAAAGCCAAAAACCCAAGCCAGCACTGCCTGATGCAGGGTCAGGTGCTTGCCTTCGCAGGCTGCTaGCTTCCGAAAACACCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TIKAKNPSQHCLMQGQVLAFAGC*LPKTPS Trigger: GGAAGGTGTTTTCGGAAGCCAGCAGCCTGCGAAGGC...AAGCACCTGACCCTGCATCAGGCAGTGCTGGCTTGGGTTTTTGGCTTTTATTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 |
||
| 3UTR CAA 72 bp | AGCACCAAGCAGTGCTTGGGAGGCAGCTCTCAGTGTTaGGTCCATGCTGAAATCAGCTACGAGGCTTCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: STKQCLGGSSQC*VHAEISYEASL Trigger: TAGAGAAGCCTCGTAGCTGATTTCAGCATGGACCAAACACTGAGAGCTGCCTCCCAAGCACTGCTTGGTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192715.6 ENSMUST00000195396.6 |
||
| CDS-3UTR TCA 90 bp | GACAGAGCACCAAGCAGTGCTTGGGAGGCAGCTCTCAGTGTTTGGTCCATGCTGACCAGCTGGCATTTCTaGGCAAATCCTTTATCACAC | + |
|
Preference number: 4 (lower is better) Translates to: DRAPSSAWEAALSVWSMLTSWHF*ANPLSH Trigger: GTGTGATAAAGGATTTGCTCAGAAATGCCAGCTGGT...CAGCATGGACCAAACACTGAGAGCTGCCTCCCAAGCACTGCTTGGTGCTCTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192715.6 |
||
| CDS-3UTR TCA 90 bp | CTTCACAGGCTGGCTGTTTACAATAAAAGCCAAAAACCCAAGCCAGCACTGCCTTCTGATGCAGGAGACTaGCTGTCCGTGACAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LHRLAVYNKSQKPKPALPSDAGD*LSVTGR Trigger: CCTGCCTGTCACGGACAGTCAGTCTCCTGCATCAGA...AGGCAGTGCTGGCTTGGGTTTTTGGCTTTTATTGTAAACAGCCAGCCTGTGAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 |
||
| CDS-3UTR CCA 90 bp | GTTTACAATAAAAGCCAAAAACCCAAGCCAGCACTGCCTGATGCAGGGTCAGGTGATAGGTCAGCGTGCTaGCCTGGGCAAATCTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: VYNKSQKPKPALPDAGSGDRSAC*PGQISA Trigger: GGCAGAGATTTGCCCAGGCCAGCACGCTGACCTATC...ACCTGACCCTGCATCAGGCAGTGCTGGCTTGGGTTTTTGGCTTTTATTGTAAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 |
||
| CDS-3UTR CCA 90 bp | GGAGGATGTGGGGGACAGAGCCACTTTAGGTTACACAGGAGTCCTAGGCCAGTCGGTCGTTCTCCTGTATaGGATCGAAAGTGTTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: GGCGGQSHFRLHRSPRPVGRSPV*DRKCLL Trigger: CAACAAACACTTTCGATCCCATACAGGAGAACGACC...GACTGGCCTAGGACTCCTGTGTAACCTAAAGTGGCTCTGTCCCCCACATCCTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192715.6 |
||
| CDS-3UTR TCA 90 bp | ACAATAAAAGCCAAAAACCCAAGCCAGCACTGCCTGATGCAGGGTCAGGTGCTTCTCTGCCCTGGTTTCTaGGAACTGAAGGCCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TIKAKNPSQHCLMQGQVLLCPGF*ELKAFF Trigger: GAAGAAGGCCTTCAGTTCTCAGAAACCAGGGCAGAG...AAGCACCTGACCCTGCATCAGGCAGTGCTGGCTTGGGTTTTTGGCTTTTATTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 |
||
| CDS-3UTR TCA 90 bp | CCAAGCAGTGCTTGGGAGGCAGCTCTCAGTGTTTGGTCCATGCTGAAATCAGCTGGTTTTTCCTCACCATaGTGCATGCGACTATGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PSSAWEAALSVWSMLKSAGFSSP*CMRLWK Trigger: CTTCCATAGTCGCATGCATCATGGTGAGGAAAAACC...AGCTGATTTCAGCATGGACCAAACACTGAGAGCTGCCTCCCAAGCACTGCTTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192715.6 |
||
| CDS-3UTR GCA 90 bp | GACAGAGCACCAAGCAGTGCTTGGGAGGCAGCTCTCAGTGTTTGGTCCATGCTGAGTCTCTCTAAAAGGTaGTCACAGTGGTGTGAATAC | + |
|
Preference number: 4 (lower is better) Translates to: DRAPSSAWEAALSVWSMLSLSKR*SQWCEY Trigger: GTATTCACACCACTGTGAGCACCTTTTAGAGAGACT...CAGCATGGACCAAACACTGAGAGCTGCCTCCCAAGCACTGCTTGGTGCTCTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192715.6 ENSMUST00000195396.6 |
||
| CDS-3UTR GCA 90 bp | GCAGCTCTCAGTGTTTGGTCCATGCTGAAATCAGCTACGAGGCTTCTCTATCAACCTTCCCGCAAGTGTTaGACATTGGCTTGGCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: AALSVWSMLKSATRLLYQPSRKC*TLAWPW Trigger: CCAAGGCCAAGCCAATGTGCAACACTTGCGGGAAGG...TTGATAGAGAAGCCTCGTAGCTGATTTCAGCATGGACCAAACACTGAGAGCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192715.6 |
||
| CDS-3UTR GCA 90 bp | TCCCTCCGACAGTTTCCATACTGGTCCACAGGGCTTACAAACAGAAACACTTCGCATGATAGGTCAGCGTaGTGGCCTGGGCAAATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLRQFPYWSTGLTNRNTSHDRSA*WPGQIS Trigger: AGAGATTTGCCCAGGCCAGCACGCTGACCTATCATG...CGAAGTGTTTCTGTTTGTAAGCCCTGTGGACCAGTATGGAAACTGTCGGAGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 |
||
| CDS-3UTR GCA 90 bp | ACAATAAAAGCCAAAAACCCAAGCCAGCACTGCCTGATGCAGGGTCAGGTGCTTGCTAGAGACAGCAAATaGCTTTCCGCAGGTGTCGCA | + |
|
Preference number: 4 (lower is better) Translates to: TIKAKNPSQHCLMQGQVLARDSK*LSAGVA Trigger: TGCGACACCTGCGGAAAGGCATTTGCTGTCTCTAGC...AAGCACCTGACCCTGCATCAGGCAGTGCTGGCTTGGGTTTTTGGCTTTTATTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 |
||
| CDS-3UTR CCA 90 bp | CTTGGTGCTGCTGTGTTGTTAGGGGCTGTGCTGCTCGCCTGGGGAATGCGGGAGATCTACACTGCAATCTaGATTTTTATCAGTACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LGAAVLLGAVLLAWGMREIYTAI*IFISTR Trigger: TCTGGTACTGATAAAAATCCAGATTGCAGTGTAGAT...CTCCCGCATTCCCCAGGCGAGCAGCACAGCCCCTAACAACACAGCAGCACCAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000192715.6 |
||
| CDS-3UTR CCA 90 bp | CTGAGGGTCCTAGTATGTCTTCTTAGTTCTGTGACTTGGAACCAAAGAGGGAGGGGCAGGAGCATCTGGTaGTCTTCAGTCCCAAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LRVLVCLLSSVTWNQRGRGRSIW*SSVPSG Trigger: TCCACTTGGGACTGAAGACCACCAGATGCTCCTGCC...CCTCCCTCTTTGGTTCCAAGTCACAGAACTAAGAAGACATACTAGGACCCTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 |
||
| CDS-3UTR TCA 90 bp | CCAAGCAGTGCTTGGGAGGCAGCTCTCAGTGTTTGGTCCATGCTGAAATCAGCTCTACCTCTTCTACTTTaGGATAGTCAGCAGCCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: PSSAWEAALSVWSMLKSALPLLL*DSQQPD Trigger: ATCAGGCTGCTGACTATCTCAAAGTAGAAGAGGTAG...AGCTGATTTCAGCATGGACCAAACACTGAGAGCTGCCTCCCAAGCACTGCTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192715.6 |
||
| CDS-3UTR TCA 90 bp | GTTTACAATAAAAGCCAAAAACCCAAGCCAGCACTGCCTGATGCAGGGTCAGGTGGTTTAGGGTTTGCCTaGACTGAGTCCGTGGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: VYNKSQKPKPALPDAGSGGLGFA*TESVET Trigger: AGTCTCCACGGACTCAGTTCAGGCAAACCCTAAACC...ACCTGACCCTGCATCAGGCAGTGCTGGCTTGGGTTTTTGGCTTTTATTGTAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 |
||
| CDS-3UTR GCA 90 bp | CCAAGCAGTGCTTGGGAGGCAGCTCTCAGTGTTTGGTCCATGCTGAAATCAGCTCATTGTTCTCAGAAGTaGTTCTGTAGATCGCCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: PSSAWEAALSVWSMLKSAHCSQK*FCRSPQ Trigger: TTGGGGCGATCTACAGAAGCACTTCTGAGAACAATG...AGCTGATTTCAGCATGGACCAAACACTGAGAGCTGCCTCCCAAGCACTGCTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192715.6 |
||
| CDS-3UTR GCA 90 bp | GCAGCTCTCAGTGTTTGGTCCATGCTGAAATCAGCTACGAGGCTTCTCTATCAAGGTACTGCACTGCTTTaGTCTGCCCTGGTTTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: AALSVWSMLKSATRLLYQGTALL*SALVSE Trigger: CTCAGAAACCAGGGCAGAGCAAAGCAGTGCAGTACC...TTGATAGAGAAGCCTCGTAGCTGATTTCAGCATGGACCAAACACTGAGAGCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192715.6 |
||
| CDS-3UTR GCA 90 bp | TCCCTCCGACAGTTTCCATACTGGTCCACAGGGCTTACAAACAGAAACACTTCGCCTCACCATGATGCATaGGACTATGGAAGACCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SLRQFPYWSTGLTNRNTSPHHDA*DYGRPA Trigger: AGCTGGTCTTCCATAGTCGCATGCATCATGGTGAGG...CGAAGTGTTTCTGTTTGTAAGCCCTGTGGACCAGTATGGAAACTGTCGGAGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 |
||
| CDS-3UTR CCA 90 bp | GGTAAAGAACTTACCGCAGGGATTCTCTGTGTTAGAATGACTCCCAGATTCTCAGTCAGCGTGCTGGCCTaGGCAAATCTCTGCCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: GKELTAGILCVRMTPRFSVSVLA*ANLCPH Trigger: ATGTGGGCAGAGATTTGCCCAGGCCAGCACGCTGAC...TGAGAATCTGGGAGTCATTCTAACACAGAGAATCCCTGCGGTAAGTTCTTTACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192715.6 |
||
| CDS-3UTR GCA 90 bp | CAAGAACTGAGGGTCCTAGTATGTCTTCTTAGTTCTGTGACTTGGAACCAAAGAGGCCTTGGAAAACCTTaGATCCAGCTCTTCCCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: QELRVLVCLLSSVTWNQRGLGKP*IQLFPG Trigger: GCCGGGGAAGAGCTGGATGCAAGGTTTTCCAAGGCC...TCTTTGGTTCCAAGTCACAGAACTAAGAAGACATACTAGGACCCTCAGTTCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 |
||
| CDS-3UTR GCA 90 bp | CTTCACAGGCTGGCTGTTTACAATAAAAGCCAAAAACCCAAGCCAGCACTGCCTCCTCACCATGATGCATaGGACTATGGAAGACCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LHRLAVYNKSQKPKPALPPHHDA*DYGRPA Trigger: AGCTGGTCTTCCATAGTCGCATGCATCATGGTGAGG...AGGCAGTGCTGGCTTGGGTTTTTGGCTTTTATTGTAAACAGCCAGCCTGTGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 |
||
| CDS-3UTR GCA 90 bp | TCCCTCCGACAGTTTCCATACTGGTCCACAGGGCTTACAAACAGAAACACTTCGGCCTGGGCAAATCTCTaGCCACATCTATCACAAACA | + |
|
Preference number: 4 (lower is better) Translates to: SLRQFPYWSTGLTNRNTSAWANL*PHLSQT Trigger: TGTTTGTGATAGATGTGGGCAGAGATTTGCCCAGGC...CGAAGTGTTTCTGTTTGTAAGCCCTGTGGACCAGTATGGAAACTGTCGGAGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 |
||
| CDS-3UTR CCA 90 bp | CAAGAACTGAGGGTCCTAGTATGTCTTCTTAGTTCTGTGACTTGGAACCAAAGAGCCTTCGCAGGCTGCTaGCTTCCGAAAACACCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QELRVLVCLLSSVTWNQRAFAGC*LPKTPS Trigger: GGAAGGTGTTTTCGGAAGCCAGCAGCCTGCGAAGGC...TCTTTGGTTCCAAGTCACAGAACTAAGAAGACATACTAGGACCCTCAGTTCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 |
||
| CDS-3UTR TCA 90 bp | GTTTACAATAAAAGCCAAAAACCCAAGCCAGCACTGCCTGATGCAGGGTCAGGTGGTTTTTCCTCACCATaGTGCATGCGACTATGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VYNKSQKPKPALPDAGSGGFSSP*CMRLWK Trigger: CTTCCATAGTCGCATGCATCATGGTGAGGAAAAACC...ACCTGACCCTGCATCAGGCAGTGCTGGCTTGGGTTTTTGGCTTTTATTGTAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 |
||
| CDS-3UTR CCA 90 bp | GACAGAGCACCAAGCAGTGCTTGGGAGGCAGCTCTCAGTGTTTGGTCCATGCTGCACAATATCTTGGGTTaGAAAAGTATTTTCCACAAC | + |
|
Preference number: 4 (lower is better) Translates to: DRAPSSAWEAALSVWSMLHNILG*KSIFHN Trigger: GTTGTGGAAAATACTTTTCCAACCCAAGATATTGTG...CAGCATGGACCAAACACTGAGAGCTGCCTCCCAAGCACTGCTTGGTGCTCTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192715.6 |
||
| CDS-3UTR CCA 90 bp | ATGGCAGAGATGAGAAACAGTCACCAGGACTTATCAGCAATGGAACTGACTGGGACATTGGCTTGGCCTTaGAAAACCTTGCATCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: MAEMRNSHQDLSAMELTGTLAWP*KTLHPA Trigger: AGCTGGATGCAAGGTTTTCCAAGGCCAAGCCAATGT...CCCAGTCAGTTCCATTGCTGATAAGTCCTGGTGACTGTTTCTCATCTCTGCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 |
||
| CDS-3UTR CCA 90 bp | ACAATAAAAGCCAAAAACCCAAGCCAGCACTGCCTGATGCAGGGTCAGGTGCTTACATGCGTCTTTAGTTaGTTGCACTGGGTAAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: TIKAKNPSQHCLMQGQVLTCVFS*LHWVNA Trigger: GGCATTTACCCAGTGCAACCAACTAAAGACGCATGT...AAGCACCTGACCCTGCATCAGGCAGTGCTGGCTTGGGTTTTTGGCTTTTATTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 |
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| CDS-3UTR TCA 90 bp | CTTCACAGGCTGGCTGTTTACAATAAAAGCCAAAAACCCAAGCCAGCACTGCCTACCAGCTGGCATTTCTaGGCAAATCCTTTATCACAC | + |
|
Preference number: 4 (lower is better) Translates to: LHRLAVYNKSQKPKPALPTSWHF*ANPLSH Trigger: GTGTGATAAAGGATTTGCTCAGAAATGCCAGCTGGT...AGGCAGTGCTGGCTTGGGTTTTTGGCTTTTATTGTAAACAGCCAGCCTGTGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 |
||
| CDS-3UTR GCA 90 bp | CTTCACAGGCTGGCTGTTTACAATAAAAGCCAAAAACCCAAGCCAGCACTGCCTCATTGTTCTCAGAAGTaGTTCTGTAGATCGCCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LHRLAVYNKSQKPKPALPHCSQK*FCRSPQ Trigger: TTGGGGCGATCTACAGAAGCACTTCTGAGAACAATG...AGGCAGTGCTGGCTTGGGTTTTTGGCTTTTATTGTAAACAGCCAGCCTGTGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 |
||
| CDS-3UTR GCA 90 bp | AGAAACAGTCACCAGGACTTATCAGCAATGGAACTGACTGGGAAACTGAACTTAGGTACTGCACTGCTTTaGTCTGCCCTGGTTTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: RNSHQDLSAMELTGKLNLGTALL*SALVSE Trigger: CTCAGAAACCAGGGCAGAGCAAAGCAGTGCAGTACC...TAAGTTCAGTTTCCCAGTCAGTTCCATTGCTGATAAGTCCTGGTGACTGTTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 |
||
| CDS-3UTR GCA 90 bp | TCCCTCCGACAGTTTCCATACTGGTCCACAGGGCTTACAAACAGAAACACTTCGTCCACTGTGTTTCCTTaGATGAATCTTGAGGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SLRQFPYWSTGLTNRNTSSTVFP*MNLEVA Trigger: AGCAACCTCAAGATTCATGCAAGGAAACACAGTGGA...CGAAGTGTTTCTGTTTGTAAGCCCTGTGGACCAGTATGGAAACTGTCGGAGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 |
||
| CDS-3UTR CCA 90 bp | TCCCTCCGACAGTTTCCATACTGGTCCACAGGGCTTACAAACAGAAACACTTCGGTTCTCCAGCTCATATaGACTCTTTACACTGGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: SLRQFPYWSTGLTNRNTSVLQLI*TLYTGY Trigger: ATAGCCAGTGTAAAGAGTCCATATGAGCTGGAGAAC...CGAAGTGTTTCTGTTTGTAAGCCCTGTGGACCAGTATGGAAACTGTCGGAGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 |
||
| CDS-3UTR CCA 90 bp | ACAATAAAAGCCAAAAACCCAAGCCAGCACTGCCTGATGCAGGGTCAGGTGCTTTGTTCGCTTACAGCATaGTCATCTACACTGCAATCT | + |
|
Preference number: 4 (lower is better) Translates to: TIKAKNPSQHCLMQGQVLCSLTA*SSTLQS Trigger: AGATTGCAGTGTAGATGACCATGCTGTAAGCGAACA...AAGCACCTGACCCTGCATCAGGCAGTGCTGGCTTGGGTTTTTGGCTTTTATTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 |
||
| CDS-3UTR TCA 90 bp | ATGGCAGAGATGAGAAACAGTCACCAGGACTTATCAGCAATGGAACTGACTGGGCTGGTTTCTGAGAACTaGAGGCCTTCTTCTTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: MAEMRNSHQDLSAMELTGLVSEN*RPSSSF Trigger: AAAAGAAGAAGAAGGCCTTCAGTTCTCAGAAACCAG...CCCAGTCAGTTCCATTGCTGATAAGTCCTGGTGACTGTTTCTCATCTCTGCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 |
||
| CDS-3UTR TCA 90 bp | AGCTTTCAGATGCTAGTTAGCAAGTTGGGGATTGAGTGGCTTGGTGCTGCTGTGTGTCATTTCCTTGAATaGTTTGCTCTACTACAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SFQMLVSKLGIEWLGAAVCHFLE*FALLQV Trigger: CACCTGTAGTAGAGCAAATCATTCAAGGAAATGACA...CACAGCAGCACCAAGCCACTCAATCCCCAACTTGCTAACTAGCATCTGAAAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192715.6 |
||
| CDS-3UTR TCA 90 bp | TTTATTGTACAAAGGTGGTATTTCATACTCTCTCCAGTTAAGTTAGTCTCGCTGCCTCAGCAGCGTGTCTaGTGCAGGAGACTGACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: FIVQRWYFILSPVKLVSLPQQRV*CRRLTV Trigger: GACAGTCAGTCTCCTGCATCAGACACGCTGCTGAGG...CAGCGAGACTAACTTAACTGGAGAGAGTATGAAATACCACCTTTGTACAATAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 |
||
| CDS-3UTR GCA 90 bp | CCTCCGACAGTTTCCATACTGGTCCACAGGGCTTACAAACAGAAACACTTCGAAGCAAGCACATTCCTATaGGCCTTAAACTGGAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: PPTVSILVHRAYKQKHFEASTFL*ALNWNS Trigger: AGAATTCCAGTTTAAGGCGCATAGGAATGTGCTTGC...TTCGAAGTGTTTCTGTTTGTAAGCCCTGTGGACCAGTATGGAAACTGTCGGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 ENSMUST00000195396.6 ENSMUST00000195751.2 |
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| CDS-3UTR GCA 90 bp | AGAAACAGTCACCAGGACTTATCAGCAATGGAACTGACTGGGAAACTGAACTTATTGTGTATTCTCATGTaGCTTCGCAGGCTGCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RNSHQDLSAMELTGKLNLLCILM*LRRLLA Trigger: AGCCAGCAGCCTGCGAAGGCACATGAGAATACACAA...TAAGTTCAGTTTCCCAGTCAGTTCCATTGCTGATAAGTCCTGGTGACTGTTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 |
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| CDS-3UTR GCA 90 bp | CAAGAACTGAGGGTCCTAGTATGTCTTCTTAGTTCTGTGACTTGGAACCAAAGATTGTGTATTCTCATGTaGCTTCGCAGGCTGCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QELRVLVCLLSSVTWNQRLCILM*LRRLLA Trigger: AGCCAGCAGCCTGCGAAGGCACATGAGAATACACAA...TCTTTGGTTCCAAGTCACAGAACTAAGAAGACATACTAGGACCCTCAGTTCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 |
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| CDS-3UTR GCA 90 bp | ATGGCAGAGATGAGAAACAGTCACCAGGACTTATCAGCAATGGAACTGACTGGGTCCACTGTGTTTCCTTaGATGAATCTTGAGGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: MAEMRNSHQDLSAMELTGSTVFP*MNLEVA Trigger: AGCAACCTCAAGATTCATGCAAGGAAACACAGTGGA...CCCAGTCAGTTCCATTGCTGATAAGTCCTGGTGACTGTTTCTCATCTCTGCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 |
||
| CDS-3UTR CCA 90 bp | ACAGTTTCCATACTGGTCCACAGGGCTTACAAACAGAAACACTTCGAAGTTGATTGCTTTGCTCTGCCCTaGTTTCTGAGAACTGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TVSILVHRAYKQKHFEVDCFALP*FLRTEG Trigger: GCCTTCAGTTCTCAGAAACCAGGGCAGAGCAAAGCA...ATCAACTTCGAAGTGTTTCTGTTTGTAAGCCCTGTGGACCAGTATGGAAACTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 |
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| CDS-3UTR CCA 90 bp | CTGAGGGTCCTAGTATGTCTTCTTAGTTCTGTGACTTGGAACCAAAGAGGGAGGTTTAGTTGGTTGCACTaGGTAAATGCCTTTCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: LRVLVCLLSSVTWNQRGRFSWLH*VNAFPH Trigger: GTGTGGAAAGGCATTTACCCAGTGCAACCAACTAAA...CCTCCCTCTTTGGTTCCAAGTCACAGAACTAAGAAGACATACTAGGACCCTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 |
||
| CDS-3UTR CCA 90 bp | ATAATTTACCGTGAAAATGCTATAGCTTTAAGAAATGGGAAGACACCTGCAGTTGTCAGCGTGCTGGCCTaGGCAAATCTCTGCCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: IIYRENAIALRNGKTPAVVSVLA*ANLCPH Trigger: ATGTGGGCAGAGATTTGCCCAGGCCAGCACGCTGAC...AACTGCAGGTGTCTTCCCATTTCTTAAAGCTATAGCATTTTCACGGTAAATTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 |
||
| CDS-3UTR TCA 90 bp | ACAGTTTCCATACTGGTCCACAGGGCTTACAAACAGAAACACTTCGAAGTTGATCTACCTCTTCTACTTTaGGATAGTCAGCAGCCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: TVSILVHRAYKQKHFEVDLPLLL*DSQQPD Trigger: ATCAGGCTGCTGACTATCTCAAAGTAGAAGAGGTAG...ATCAACTTCGAAGTGTTTCTGTTTGTAAGCCCTGTGGACCAGTATGGAAACTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 |
||
| CDS-3UTR TCA 90 bp | TTTATTGTACAAAGGTGGTATTTCATACTCTCTCCAGTTAAGTTAGTCTCGCTGCTCTGCCCTGGTTTCTaGGAACTGAAGGCCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FIVQRWYFILSPVKLVSLLCPGF*ELKAFF Trigger: GAAGAAGGCCTTCAGTTCTCAGAAACCAGGGCAGAG...CAGCGAGACTAACTTAACTGGAGAGAGTATGAAATACCACCTTTGTACAATAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 |
||
| CDS-3UTR GCA 90 bp | TTTATTGTACAAAGGTGGTATTTCATACTCTCTCCAGTTAAGTTAGTCTCGCTGGCTAGAGACAGCAAATaGCTTTCCGCAGGTGTCGCA | + |
|
Preference number: 4 (lower is better) Translates to: FIVQRWYFILSPVKLVSLARDSK*LSAGVA Trigger: TGCGACACCTGCGGAAAGGCATTTGCTGTCTCTAGC...CAGCGAGACTAACTTAACTGGAGAGAGTATGAAATACCACCTTTGTACAATAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 |
||
| CDS-3UTR CCA 90 bp | ACAGTTTCCATACTGGTCCACAGGGCTTACAAACAGAAACACTTCGAAGTTGATACATGCGTCTTTAGTTaGTTGCACTGGGTAAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: TVSILVHRAYKQKHFEVDTCVFS*LHWVNA Trigger: GGCATTTACCCAGTGCAACCAACTAAAGACGCATGT...ATCAACTTCGAAGTGTTTCTGTTTGTAAGCCCTGTGGACCAGTATGGAAACTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 |
||
| CDS-3UTR CCA 90 bp | AAGTTTATTGTACAAAGGTGGTATTTCATACTCTCTCCAGTTAAGTTAGTCTCGGGCAGGAGCATCTGGTaGTCTTCAGTCCCAAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: KFIVQRWYFILSPVKLVSGRSIW*SSVPSG Trigger: TCCACTTGGGACTGAAGACCACCAGATGCTCCTGCC...CGAGACTAACTTAACTGGAGAGAGTATGAAATACCACCTTTGTACAATAAACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 |
||
| CDS-3UTR CCA 90 bp | TTTATTGTACAAAGGTGGTATTTCATACTCTCTCCAGTTAAGTTAGTCTCGCTGACAGGCAGGAGCATCTaGTGGTCTTCAGTCCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: FIVQRWYFILSPVKLVSLTGRSI*WSSVPS Trigger: ACTTGGGACTGAAGACCACCAGATGCTCCTGCCTGT...CAGCGAGACTAACTTAACTGGAGAGAGTATGAAATACCACCTTTGTACAATAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 |
||
| CDS-3UTR TCA 90 bp | GTCTCGCTGGTCATAATTTACCGTGAAAATGCTATAGCTTTAAGAAATGGGAAGAACTCCAACAGTTTCTaGAATCCGTCAGCCTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: VSLVIIYRENAIALRNGKNSNSF*NPSAFT Trigger: GGTGAAGGCTGACGGATTTCAGAAACTGTTGGAGTT...CTTCCCATTTCTTAAAGCTATAGCATTTTCACGGTAAATTATGACCAGCGAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 |
||
| CDS-3UTR GCA 90 bp | ACAGTTTCCATACTGGTCCACAGGGCTTACAAACAGAAACACTTCGAAGTTGATAGTCTCTCTAAAAGGTaGTCACAGTGGTGTGAATAC | + |
|
Preference number: 4 (lower is better) Translates to: TVSILVHRAYKQKHFEVDSLSKR*SQWCEY Trigger: GTATTCACACCACTGTGAGCACCTTTTAGAGAGACT...ATCAACTTCGAAGTGTTTCTGTTTGTAAGCCCTGTGGACCAGTATGGAAACTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 ENSMUST00000195396.6 ENSMUST00000195751.2 |
||
| CDS-3UTR GCA 90 bp | CAAGAACTGAGGGTCCTAGTATGTCTTCTTAGTTCTGTGACTTGGAACCAAAGAAGTCTCTCTAAAAGGTaGTCACAGTGGTGTGAATAC | + |
|
Preference number: 4 (lower is better) Translates to: QELRVLVCLLSSVTWNQRSLSKR*SQWCEY Trigger: GTATTCACACCACTGTGAGCACCTTTTAGAGAGACT...TCTTTGGTTCCAAGTCACAGAACTAAGAAGACATACTAGGACCCTCAGTTCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 ENSMUST00000195396.6 ENSMUST00000195751.2 |
||
| CDS-3UTR GCA 90 bp | AGAAACAGTCACCAGGACTTATCAGCAATGGAACTGACTGGGAAACTGAACTTAGCAAGCACATTCCTATaGGCCTTAAACTGGAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: RNSHQDLSAMELTGKLNLASTFL*ALNWNS Trigger: AGAATTCCAGTTTAAGGCGCATAGGAATGTGCTTGC...TAAGTTCAGTTTCCCAGTCAGTTCCATTGCTGATAAGTCCTGGTGACTGTTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 ENSMUST00000195396.6 ENSMUST00000195751.2 |
||
| CDS-3UTR CCA 90 bp | CTGAGGGTCCTAGTATGTCTTCTTAGTTCTGTGACTTGGAACCAAAGAGGGAGGTTATCAGTACCAGAATaGACCTTTGTTTTATGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LRVLVCLLSSVTWNQRGRLSVPE*TFVLCF Trigger: GAAGCATAAAACAAAGGTCCATTCTGGTACTGATAA...CCTCCCTCTTTGGTTCCAAGTCACAGAACTAAGAAGACATACTAGGACCCTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 |
||
| CDS-3UTR CCA 90 bp | GTTTACAATAAAAGCCAAAAACCCAAGCCAGCACTGCCTGATGCAGGGTCAGGTATCTACACTGCAATCTaGATTTTTATCAGTACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VYNKSQKPKPALPDAGSGIYTAI*IFISTR Trigger: TCTGGTACTGATAAAAATCCAGATTGCAGTGTAGAT...ACCTGACCCTGCATCAGGCAGTGCTGGCTTGGGTTTTTGGCTTTTATTGTAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 |
||
| CDS-3UTR CCA 90 bp | ATAATTTACCGTGAAAATGCTATAGCTTTAAGAAATGGGAAGACACCTGCAGTTACAGGCAGGAGCATCTaGTGGTCTTCAGTCCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: IIYRENAIALRNGKTPAVTGRSI*WSSVPS Trigger: ACTTGGGACTGAAGACCACCAGATGCTCCTGCCTGT...AACTGCAGGTGTCTTCCCATTTCTTAAAGCTATAGCATTTTCACGGTAAATTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 |
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| 3UTR CAA 72 bp | TGCTATAGCTTTAAGAAATGGGAAGACACCTGCAGTTaGCAAGAACTGAGGGTCCTAGTATGTCTTCTTAGT | + |
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Preference number: 4 (lower is better) Translates to: CYSFKKWEDTCS*QELRVLVCLLS Trigger: ACTAAGAAGACATACTAGGACCCTCAGTTCTTGCAAACTGCAGGTGTCTTCCCATTTCTTAAAGCTATAGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 ENSMUST00000195396.6 ENSMUST00000195751.2 |
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| CDS-3UTR GCA 90 bp | GTTTGCACAATATCTTGGGTTGGAAAAGTATTTTCCACAACCGAGGTCAACTCAGCAAGCACATTCCTATaGGCCTTAAACTGGAATTCT | + |
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Preference number: 4 (lower is better) Translates to: VCTISWVGKVFSTTEVNSASTFL*ALNWNS Trigger: AGAATTCCAGTTTAAGGCGCATAGGAATGTGCTTGC...TGAGTTGACCTCGGTTGTGGAAAATACTTTTCCAACCCAAGATATTGTGCAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
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| CDS-3UTR CCA 90 bp | AAGTTTATTGTACAAAGGTGGTATTTCATACTCTCTCCAGTTAAGTTAGTCTCGTGCTTTGCTCTGCCCTaGTTTCTGAGAACTGAAGGC | + |
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Preference number: 4 (lower is better) Translates to: KFIVQRWYFILSPVKLVSCFALP*FLRTEG Trigger: GCCTTCAGTTCTCAGAAACCAGGGCAGAGCAAAGCA...CGAGACTAACTTAACTGGAGAGAGTATGAAATACCACCTTTGTACAATAAACTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 |
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| CDS-3UTR CCA 90 bp | TTTATTGTACAAAGGTGGTATTTCATACTCTCTCCAGTTAAGTTAGTCTCGCTGACATTGGCTTGGCCTTaGAAAACCTTGCATCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: FIVQRWYFILSPVKLVSLTLAWP*KTLHPA Trigger: AGCTGGATGCAAGGTTTTCCAAGGCCAAGCCAATGT...CAGCGAGACTAACTTAACTGGAGAGAGTATGAAATACCACCTTTGTACAATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 |
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| CDS-3UTR TCA 90 bp | ATAATTTACCGTGAAAATGCTATAGCTTTAAGAAATGGGAAGACACCTGCAGTTAACTCCAACAGTTTCTaGAATCCGTCAGCCTTCACC | + |
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Preference number: 4 (lower is better) Translates to: IIYRENAIALRNGKTPAVNSNSF*NPSAFT Trigger: GGTGAAGGCTGACGGATTTCAGAAACTGTTGGAGTT...AACTGCAGGTGTCTTCCCATTTCTTAAAGCTATAGCATTTTCACGGTAAATTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 |
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| CDS-3UTR GCA 90 bp | GTCTCGCTGGTCATAATTTACCGTGAAAATGCTATAGCTTTAAGAAATGGGAAGAATCCCGCTTCCCGTTaGTTATTCAGTCTCTCTAAA | + |
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Preference number: 4 (lower is better) Translates to: VSLVIIYRENAIALRNGKNPASR*LFSLSK Trigger: TTTAGAGAGACTGAATAAGCAACGGGAAGCGGGATT...CTTCCCATTTCTTAAAGCTATAGCATTTTCACGGTAAATTATGACCAGCGAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 ENSMUST00000195396.6 ENSMUST00000195751.2 |
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| CDS-3UTR GCA 90 bp | ATAATTTACCGTGAAAATGCTATAGCTTTAAGAAATGGGAAGACACCTGCAGTTGCCTGGGCAAATCTCTaGCCACATCTATCACAAACA | + |
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Preference number: 4 (lower is better) Translates to: IIYRENAIALRNGKTPAVAWANL*PHLSQT Trigger: TGTTTGTGATAGATGTGGGCAGAGATTTGCCCAGGC...AACTGCAGGTGTCTTCCCATTTCTTAAAGCTATAGCATTTTCACGGTAAATTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 |
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| CDS-3UTR TCA 90 bp | GTCTCGCTGGTCATAATTTACCGTGAAAATGCTATAGCTTTAAGAAATGGGAAGGGTCAACTCAAGTTCTaGACTGTCATTTCCTTGAAT | + |
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Preference number: 4 (lower is better) Translates to: VSLVIIYRENAIALRNGKGQLKF*TVISLN Trigger: ATTCAAGGAAATGACAGTTCAGAACTTGAGTTGACC...CTTCCCATTTCTTAAAGCTATAGCATTTTCACGGTAAATTATGACCAGCGAGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 |
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| CDS-3UTR GCA 90 bp | TTTATTGTACAAAGGTGGTATTTCATACTCTCTCCAGTTAAGTTAGTCTCGCTGGCAAGCACATTCCTATaGGCCTTAAACTGGAATTCT | + |
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Preference number: 4 (lower is better) Translates to: FIVQRWYFILSPVKLVSLASTFL*ALNWNS Trigger: AGAATTCCAGTTTAAGGCGCATAGGAATGTGCTTGC...CAGCGAGACTAACTTAACTGGAGAGAGTATGAAATACCACCTTTGTACAATAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 ENSMUST00000195396.6 ENSMUST00000195751.2 |
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| CDS-3UTR CCA 90 bp | ACAGTTTCCATACTGGTCCACAGGGCTTACAAACAGAAACACTTCGAAGTTGATTTATCAGTACCAGAATaGACCTTTGTTTTATGCTTC | + |
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Preference number: 4 (lower is better) Translates to: TVSILVHRAYKQKHFEVDLSVPE*TFVLCF Trigger: GAAGCATAAAACAAAGGTCCATTCTGGTACTGATAA...ATCAACTTCGAAGTGTTTCTGTTTGTAAGCCCTGTGGACCAGTATGGAAACTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 |
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| CDS-3UTR TCA 90 bp | ATAATTTACCGTGAAAATGCTATAGCTTTAAGAAATGGGAAGACACCTGCAGTTCTGGTTTCTGAGAACTaGAGGCCTTCTTCTTCTTTT | + |
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Preference number: 4 (lower is better) Translates to: IIYRENAIALRNGKTPAVLVSEN*RPSSSF Trigger: AAAAGAAGAAGAAGGCCTTCAGTTCTCAGAAACCAG...AACTGCAGGTGTCTTCCCATTTCTTAAAGCTATAGCATTTTCACGGTAAATTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 |
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| CDS-3UTR TCA 90 bp | TTTATTGTACAAAGGTGGTATTTCATACTCTCTCCAGTTAAGTTAGTCTCGCTGGGTCAACTCAAGTTCTaGACTGTCATTTCCTTGAAT | + |
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Preference number: 4 (lower is better) Translates to: FIVQRWYFILSPVKLVSLGQLKF*TVISLN Trigger: ATTCAAGGAAATGACAGTTCAGAACTTGAGTTGACC...CAGCGAGACTAACTTAACTGGAGAGAGTATGAAATACCACCTTTGTACAATAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 |
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| CDS-3UTR GCA 90 bp | TCTCCAGTTAAGTTAGTCTCGCTGGTCATAATTTACCGTGAAAATGCTATAGCTTTGACTGTAACAGTTTaGACAATATCTTGGGTTGGA | + |
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Preference number: 4 (lower is better) Translates to: SPVKLVSLVIIYRENAIALTVTV*TISWVG Trigger: TCCAACCCAAGATATTGTGCAAACTGTTACAGTCAA...AGCTATAGCATTTTCACGGTAAATTATGACCAGCGAGACTAACTTAACTGGAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 |
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| CDS-3UTR GCA 90 bp | GTCTCGCTGGTCATAATTTACCGTGAAAATGCTATAGCTTTAAGAAATGGGAAGCATGGTCATCTACACTaGAATCTGGATTTTTATCAG | + |
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Preference number: 4 (lower is better) Translates to: VSLVIIYRENAIALRNGKHGHLH*NLDFYQ Trigger: CTGATAAAAATCCAGATTGCAGTGTAGATGACCATG...CTTCCCATTTCTTAAAGCTATAGCATTTTCACGGTAAATTATGACCAGCGAGAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 |
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| CDS-3UTR CCA 90 bp | ATAATTTACCGTGAAAATGCTATAGCTTTAAGAAATGGGAAGACACCTGCAGTTTTTAGTTGGTTGCACTaGGTAAATGCCTTTCCACAC | + |
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Preference number: 4 (lower is better) Translates to: IIYRENAIALRNGKTPAVFSWLH*VNAFPH Trigger: GTGTGGAAAGGCATTTACCCAGTGCAACCAACTAAA...AACTGCAGGTGTCTTCCCATTTCTTAAAGCTATAGCATTTTCACGGTAAATTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 |
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| CDS-3UTR CCA 90 bp | TTTATTGTACAAAGGTGGTATTTCATACTCTCTCCAGTTAAGTTAGTCTCGCTGCACAATATCTTGGGTTaGAAAAGTATTTTCCACAAC | + |
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Preference number: 4 (lower is better) Translates to: FIVQRWYFILSPVKLVSLHNILG*KSIFHN Trigger: GTTGTGGAAAATACTTTTCCAACCCAAGATATTGTG...CAGCGAGACTAACTTAACTGGAGAGAGTATGAAATACCACCTTTGTACAATAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 |
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| CDS-3UTR CAA 90 bp | GGAGGATGTGGGGGACAGAGCCACTTTAGGTTACACAGGAGTCCTAGGCCAGTCTGGGATCGAAAGTGTTaGTTGAGCTCTCCTGAGGAA | + |
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Preference number: 5 (lower is better) Translates to: GGCGGQSHFRLHRSPRPVWDRKC*LSSPEE Trigger: TTCCTCAGGAGAGCTCAACAAACACTTTCGATCCCA...GACTGGCCTAGGACTCCTGTGTAACCTAAAGTGGCTCTGTCCCCCACATCCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192715.6 |
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| CDS-3UTR CAA 90 bp | CCTCCGACAGTTTCCATACTGGTCCACAGGGCTTACAAACAGAAACACTTCGAAACCTTCCCGCAAGTGTaGCACATTGGCTTGGCCTTG | + |
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Preference number: 5 (lower is better) Translates to: PPTVSILVHRAYKQKHFETFPQV*HIGLAL Trigger: CAAGGCCAAGCCAATGTGCAACACTTGCGGGAAGGT...TTCGAAGTGTTTCTGTTTGTAAGCCCTGTGGACCAGTATGGAAACTGTCGGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 |
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| CDS-3UTR CAA 90 bp | GCAGCTCTCAGTGTTTGGTCCATGCTGAAATCAGCTACGAGGCTTCTCTATCAAACCTTCCCGCAAGTGTaGCACATTGGCTTGGCCTTG | + |
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Preference number: 5 (lower is better) Translates to: AALSVWSMLKSATRLLYQTFPQV*HIGLAL Trigger: CAAGGCCAAGCCAATGTGCAACACTTGCGGGAAGGT...TTGATAGAGAAGCCTCGTAGCTGATTTCAGCATGGACCAAACACTGAGAGCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192715.6 |
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| CDS-3UTR CAA 90 bp | GGAGGATGTGGGGGACAGAGCCACTTTAGGTTACACAGGAGTCCTAGGCCAGTCTTTGACTGTAACAGTTaGCACAATATCTTGGGTTGG | + |
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Preference number: 5 (lower is better) Translates to: GGCGGQSHFRLHRSPRPVFDCNS*HNILGW Trigger: CCAACCCAAGATATTGTGCAAACTGTTACAGTCAAA...GACTGGCCTAGGACTCCTGTGTAACCTAAAGTGGCTCTGTCCCCCACATCCTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192715.6 |
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| CDS-3UTR CAA 90 bp | GTTTACAATAAAAGCCAAAAACCCAAGCCAGCACTGCCTGATGCAGGGTCAGGTGTGTTGCACATTGGCTaGGCCTTGGAAAACCTTGCA | + |
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Preference number: 5 (lower is better) Translates to: VYNKSQKPKPALPDAGSGVLHIG*ALENLA Trigger: TGCAAGGTTTTCCAAGGCCAAGCCAATGTGCAACAC...ACCTGACCCTGCATCAGGCAGTGCTGGCTTGGGTTTTTGGCTTTTATTGTAAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 |
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| CDS-3UTR CAA 90 bp | ATGGCAGAGATGAGAAACAGTCACCAGGACTTATCAGCAATGGAACTGACTGGGGTGTTGCACATTGGCTaGGCCTTGGAAAACCTTGCA | + |
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Preference number: 5 (lower is better) Translates to: MAEMRNSHQDLSAMELTGVLHIG*ALENLA Trigger: TGCAAGGTTTTCCAAGGCCAAGCCAATGTGCAACAC...CCCAGTCAGTTCCATTGCTGATAAGTCCTGGTGACTGTTTCTCATCTCTGCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 |
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| CDS GCA 90 bp | TCTCCAATCACTACGGTACAGTCGCAAAGAAATCCCGCTTCCCGTTaGTTATTCAGTCTCTCTAAAAGGTGCTCACAGTGGTGTGAATAC | + |
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Preference number: 5 (lower is better) Translates to: SPITTVQSQRNPASR*LFSLSKRCSQWCEY Trigger: GTATTCACACCACTGTGAGCACCTTTTAGAGAGACTGAATAAGCAACGGGAAGCGGGATTTCTTTGCGACTGTACCGTAGTGATTGGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 ENSMUST00000195396.6 ENSMUST00000195751.2 |
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| CDS-3UTR CAA 90 bp | GCAGCTCTCAGTGTTTGGTCCATGCTGAAATCAGCTACGAGGCTTCTCTATCAATGCGTCTTTAGTTGGTaGCACTGGGTAAATGCCTTT | + |
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Preference number: 5 (lower is better) Translates to: AALSVWSMLKSATRLLYQCVFSW*HWVNAF Trigger: AAAGGCATTTACCCAGTGCAACCAACTAAAGACGCA...TTGATAGAGAAGCCTCGTAGCTGATTTCAGCATGGACCAAACACTGAGAGCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192715.6 |
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| CDS-3UTR CAA 90 bp | CTGAGGGTCCTAGTATGTCTTCTTAGTTCTGTGACTTGGAACCAAAGAGGGAGGGATCGAAAGTGTTTGTaGAGCTCTCCTGAGGAAATA | + |
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Preference number: 5 (lower is better) Translates to: LRVLVCLLSSVTWNQRGRDRKCL*SSPEEI Trigger: TATTTCCTCAGGAGAGCTCAACAAACACTTTCGATC...CCTCCCTCTTTGGTTCCAAGTCACAGAACTAAGAAGACATACTAGGACCCTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192715.6 |
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| CDS CCA 90 bp | AACATTCCAATAAAGGAGGCAAGCACATTCCTATGCGCCTTAAACTaGAATTCTCCAATCACTACGGTACAGTCGCAAAGAAATCCCGCT | + |
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Preference number: 5 (lower is better) Translates to: NIPIKEASTFLCALN*NSPITTVQSQRNPA Trigger: AGCGGGATTTCTTTGCGACTGTACCGTAGTGATTGGAGAATTCCAGTTTAAGGCGCATAGGAATGTGCTTGCCTCCTTTATTGGAATGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
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| CDS-3UTR CAA 90 bp | GTCTCGCTGGTCATAATTTACCGTGAAAATGCTATAGCTTTAAGAAATGGGAAGCACATTGGCTTGGCCTaGGAAAACCTTGCATCCAGC | + |
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Preference number: 5 (lower is better) Translates to: VSLVIIYRENAIALRNGKHIGLA*ENLASS Trigger: GCTGGATGCAAGGTTTTCCAAGGCCAAGCCAATGTG...CTTCCCATTTCTTAAAGCTATAGCATTTTCACGGTAAATTATGACCAGCGAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 |
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| CDS-3UTR CAA 90 bp | ACAGTTTCCATACTGGTCCACAGGGCTTACAAACAGAAACACTTCGAAGTTGATAAGAAGACAGGCCTGTaGATTCAATTCGATGTTTCC | + |
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Preference number: 5 (lower is better) Translates to: TVSILVHRAYKQKHFEVDKKTGL*IQFDVS Trigger: GGAAACATCGAATTGAATCAACAGGCCTGTCTTCTT...ATCAACTTCGAAGTGTTTCTGTTTGTAAGCCCTGTGGACCAGTATGGAAACTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 |
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| CDS GCA 90 bp | ATGGATTTCTTTAACATTCCAATAAAGGAGGCAAGCACATTCCTATaGGCCTTAAACTGGAATTCTCCAATCACTACGGTACAGTCGCAA | + |
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Preference number: 5 (lower is better) Translates to: MDFFNIPIKEASTFL*ALNWNSPITTVQSQ Trigger: TTGCGACTGTACCGTAGTGATTGGAGAATTCCAGTTTAAGGCGCATAGGAATGTGCTTGCCTCCTTTATTGGAATGTTAAAGAAATCCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
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| CDS-3UTR CAA 90 bp | GTCTCGCTGGTCATAATTTACCGTGAAAATGCTATAGCTTTAAGAAATGGGAAGAAGAAGACAGGCCTGTaGATTCAATTCGATGTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: VSLVIIYRENAIALRNGKKKTGL*IQFDVS Trigger: GGAAACATCGAATTGAATCAACAGGCCTGTCTTCTT...CTTCCCATTTCTTAAAGCTATAGCATTTTCACGGTAAATTATGACCAGCGAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 |
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| CDS-3UTR CAA 90 bp | TTTATTGTACAAAGGTGGTATTTCATACTCTCTCCAGTTAAGTTAGTCTCGCTGTTTGACTGTAACAGTTaGCACAATATCTTGGGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: FIVQRWYFILSPVKLVSLFDCNS*HNILGW Trigger: CCAACCCAAGATATTGTGCAAACTGTTACAGTCAAA...CAGCGAGACTAACTTAACTGGAGAGAGTATGAAATACCACCTTTGTACAATAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 |
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| CDS CCA 72 bp | CTAAAGGAGGCAAGCACATTCCTATGCGCCTTAAACTaGAATTCTCCAATCACTACGGTACAGTCGCAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: LKEASTFLCALN*NSPITTVQSQR Trigger: TCTTTGCGACTGTACCGTAGTGATTGGAGAATTCCAGTTTAAGGCGCATAGGAATGTGCTTGCCTCCTTTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047502.9 ENSMUST00000192715.6 |
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| CDS CCA 72 bp | ATAAAGGAGGCAAGCACATTCCTATGCGCCTTAAACTaGAATTCTCCAATCACTACGGTACAGTCGCAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: IKEASTFLCALN*NSPITTVQSQR Trigger: TCTTTGCGACTGTACCGTAGTGATTGGAGAATTCCAGTTTAAGGCGCATAGGAATGTGCTTGCCTCCTTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
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| CDS GCA 72 bp | TTTAACATTCCAATAAAGGAGGCAAGCACATTCCTATaGGCCTTAAACTGGAATTCTCCAATCACTACGGTA | + |
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Preference number: 6 (lower is better) Translates to: FNIPIKEASTFL*ALNWNSPITTV Trigger: TACCGTAGTGATTGGAGAATTCCAGTTTAAGGCGCATAGGAATGTGCTTGCCTCCTTTATTGGAATGTTAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000195396.6 ENSMUST00000195751.2 |
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