Pregenerated sensors for MYMX (Mus musculus)
Ensembl gene IDs: ENSMUSG00000079471Ensembl transcript IDs: ENSMUST00000113529.4, ENSMUST00000169137.3, ENSMUST00000178858.3, ENSMUST00000208801.2
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | CTGCTAGGAGCTAGGGGAGTGGGAACTGTTCAGGTCAGAGCCCTCTaGCACTCAGCCCGGACTGTCTTCGCCCACTGGGCAGTCTGCCGT | + |
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Preference number: 2 (lower is better) Translates to: LLGARGVGTVQVRAL*HSARTVFAHWAVCR Trigger: ACGGCAGACTGCCCAGTGGGCGAAGACAGTCCGGGCTGAGTGCAAGAGGGCTCTGACCTGAACAGTTCCCACTCCCCTAGCTCCTAGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178858.3 |
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| 3UTR GCA 72 bp | CGGACTGTCTTCGCCCACTGGGCAGTCTGCCGTCCATaGCCGTGCGTGCGGACCGACGCCTGGACTAACCGG | + |
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Preference number: 3 (lower is better) Translates to: RTVFAHWAVCRP*PCVRTDAWTNR Trigger: CCGGTTAGTCCAGGCGTCGGTCCGCACGCACGGGCATGGACGGCAGACTGCCCAGTGGGCGAAGACAGTCCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169137.3 ENSMUST00000178858.3 |
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| 3UTR GCA 72 bp | CTAGGGGAGTGGGAACTGTTCAGGTCAGAGCCCTCTTaGACTCAGCCCGGACTGTCTTCGCCCACTGGGCAG | + |
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Preference number: 3 (lower is better) Translates to: LGEWELFRSEPS*TQPGLSSPTGQ Trigger: CTGCCCAGTGGGCGAAGACAGTCCGGGCTGAGTGCAAGAGGGCTCTGACCTGAACAGTTCCCACTCCCCTAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178858.3 |
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| 3UTR CCA 72 bp | GTCTGCCGTCCATGCCCGTGCGTGCGGACCGACGCCTaGACTAACCGGCTCCAAAAGTACTTTGATGGGCGT | + |
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Preference number: 3 (lower is better) Translates to: VCRPCPCVRTDA*TNRLQKYFDGR Trigger: ACGCCCATCAAAGTACTTTTGGAGCCGGTTAGTCCAGGCGTCGGTCCGCACGCACGGGCATGGACGGCAGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169137.3 ENSMUST00000178858.3 |
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| 3UTR GCA 72 bp | AAACATCATCTCTTAACTGACCTTGATACCCGCATTTaGAGGTCCACCCTGGAGGCCAGAGATAAGGCAGAG | + |
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Preference number: 3 (lower is better) Translates to: KHHLLTDLDTRI*RSTLEARDKAE Trigger: CTCTGCCTTATCTCTGGCCTCCAGGGTGGACCTGCAAATGCGGGTATCAAGGTCAGTTAAGAGATGATGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178858.3 |
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| 3UTR CAA 72 bp | GCTAGGGGAGTGGGAACTGTTCAGGTCAGAGCCCTCTaGCACTCAGCCCGGACTGTCTTCGCCCACTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: ARGVGTVQVRAL*HSARTVFAHWA Trigger: TGCCCAGTGGGCGAAGACAGTCCGGGCTGAGTGCAAGAGGGCTCTGACCTGAACAGTTCCCACTCCCCTAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178858.3 |
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| CDS-3UTR CCA 90 bp | CGTGCGTGCGGACCGACGCCTGGACTAACCGGCTCCAAAAGTACTTTGATGGGCGGGAGTGGTCCACTCTaGAGGCCTCTCCAGAATCCG | + |
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Preference number: 4 (lower is better) Translates to: RACGPTPGLTGSKSTLMGGSGPL*RPLQNP Trigger: CGGATTCTGGAGAGGCCTCCAGAGTGGACCACTCCC...GCCCATCAAAGTACTTTTGGAGCCGGTTAGTCCAGGCGTCGGTCCGCACGCACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113529.4 ENSMUST00000169137.3 ENSMUST00000178858.3 |
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| CDS-3UTR CCA 90 bp | CCGTGCGTGCGGACCGACGCCTGGACTAACCGGCTCCAAAAGTACTTTGATGGGGGGAGTGGTCCACTCTaGAGGCCTCTCCAGAATCCG | + |
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Preference number: 4 (lower is better) Translates to: PCVRTDAWTNRLQKYFDGGSGPL*RPLQNP Trigger: CGGATTCTGGAGAGGCCTCCAGAGTGGACCACTCCC...CCCATCAAAGTACTTTTGGAGCCGGTTAGTCCAGGCGTCGGTCCGCACGCACGG 61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000113529.4 ENSMUST00000169137.3 ENSMUST00000178858.3 |
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| CDS-3UTR GCA 90 bp | CGTGCGTGCGGACCGACGCCTGGACTAACCGGCTCCAAAAGTACTTTGATGGGCGAATCCGGTGGCTGTTaGTGGCTGAGGACAAAGAGC | + |
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Preference number: 4 (lower is better) Translates to: RACGPTPGLTGSKSTLMGESGGC*WLRTKS Trigger: GCTCTTTGTCCTCAGCCAGCAACAGCCACCGGATTC...GCCCATCAAAGTACTTTTGGAGCCGGTTAGTCCAGGCGTCGGTCCGCACGCACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113529.4 ENSMUST00000169137.3 ENSMUST00000178858.3 |
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| CDS-3UTR CCA 90 bp | CTAACCGGCTCCAAAAGTACTTTGATGGGCGTTGCTGTTTCCAGGACCCGTGGCGCCTCTCTCATGTCTTaGGAGCTCAGTCGGCGGGCC | + |
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Preference number: 4 (lower is better) Translates to: LTGSKSTLMGVAVSRTRGASLMS*ELSRRA Trigger: GGCCCGCCGACTGAGCTCCCAAGACATGAGAGAGGC...GCCACGGGTCCTGGAAACAGCAACGCCCATCAAAGTACTTTTGGAGCCGGTTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113529.4 ENSMUST00000169137.3 ENSMUST00000178858.3 ENSMUST00000208801.2 |
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| CDS-3UTR CCA 90 bp | CGGACCGACGCCTGGACTAACCGGCTCCAAAAGTACTTTGATGGGCGTTGCTGTGGGAGTGGTCCACTCTaGAGGCCTCTCCAGAATCCG | + |
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Preference number: 4 (lower is better) Translates to: RTDAWTNRLQKYFDGRCCGSGPL*RPLQNP Trigger: CGGATTCTGGAGAGGCCTCCAGAGTGGACCACTCCC...ACAGCAACGCCCATCAAAGTACTTTTGGAGCCGGTTAGTCCAGGCGTCGGTCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113529.4 ENSMUST00000169137.3 ENSMUST00000178858.3 |
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| CDS-3UTR GCA 90 bp | GTGCGGACCGACGCCTGGACTAACCGGCTCCAAAAGTACTTTGATGGGCGTTGCGAATCCGGTGGCTGTTaGTGGCTGAGGACAAAGAGC | + |
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Preference number: 4 (lower is better) Translates to: VRTDAWTNRLQKYFDGRCESGGC*WLRTKS Trigger: GCTCTTTGTCCTCAGCCAGCAACAGCCACCGGATTC...GCAACGCCCATCAAAGTACTTTTGGAGCCGGTTAGTCCAGGCGTCGGTCCGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113529.4 ENSMUST00000169137.3 ENSMUST00000178858.3 |
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| CDS-3UTR CCA 90 bp | GGACTAACCGGCTCCAAAAGTACTTTGATGGGCGTTGCTGTTTCCAGGACCCGTGCCTCTCTCATGTCTTaGGAGCTCAGTCGGCGGGCC | + |
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Preference number: 4 (lower is better) Translates to: GLTGSKSTLMGVAVSRTRASLMS*ELSRRA Trigger: GGCCCGCCGACTGAGCTCCCAAGACATGAGAGAGGC...ACGGGTCCTGGAAACAGCAACGCCCATCAAAGTACTTTTGGAGCCGGTTAGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113529.4 ENSMUST00000169137.3 ENSMUST00000178858.3 ENSMUST00000208801.2 |
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| CDS-3UTR CCA 90 bp | ACTAACCGGCTCCAAAAGTACTTTGATGGGCGTTGCTGTTTCCAGGACCCGTGGGCCTCTCTCATGTCTTaGGAGCTCAGTCGGCGGGCC | + |
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Preference number: 4 (lower is better) Translates to: TNRLQKYFDGRCCFQDPWASLMS*ELSRRA Trigger: GGCCCGCCGACTGAGCTCCCAAGACATGAGAGAGGC...CCACGGGTCCTGGAAACAGCAACGCCCATCAAAGTACTTTTGGAGCCGGTTAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113529.4 ENSMUST00000169137.3 ENSMUST00000178858.3 ENSMUST00000208801.2 |
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| CDS-3UTR CCA 90 bp | CTAACCGGCTCCAAAAGTACTTTGATGGGCGTTGCTGTTTCCAGGACCCGTGGCGGGAGTGGTCCACTCTaGAGGCCTCTCCAGAATCCG | + |
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Preference number: 4 (lower is better) Translates to: LTGSKSTLMGVAVSRTRGGSGPL*RPLQNP Trigger: CGGATTCTGGAGAGGCCTCCAGAGTGGACCACTCCC...GCCACGGGTCCTGGAAACAGCAACGCCCATCAAAGTACTTTTGGAGCCGGTTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113529.4 ENSMUST00000169137.3 ENSMUST00000178858.3 ENSMUST00000208801.2 |
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| CDS-3UTR GCA 90 bp | TGCGGACCGACGCCTGGACTAACCGGCTCCAAAAGTACTTTGATGGGCGTTGCTGAATCCGGTGGCTGTTaGTGGCTGAGGACAAAGAGC | + |
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Preference number: 4 (lower is better) Translates to: CGPTPGLTGSKSTLMGVAESGGC*WLRTKS Trigger: GCTCTTTGTCCTCAGCCAGCAACAGCCACCGGATTC...AGCAACGCCCATCAAAGTACTTTTGGAGCCGGTTAGTCCAGGCGTCGGTCCGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113529.4 ENSMUST00000169137.3 ENSMUST00000178858.3 |
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| CDS-3UTR GCA 90 bp | GGACTAACCGGCTCCAAAAGTACTTTGATGGGCGTTGCTGTTTCCAGGACCCGTGGGCATGGCAGGACCTaGACCTCTGTACTCCCCAGT | + |
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Preference number: 4 (lower is better) Translates to: GLTGSKSTLMGVAVSRTRGHGRT*TSVLPS Trigger: ACTGGGGAGTACAGAGGTGCAGGTCCTGCCATGCCC...ACGGGTCCTGGAAACAGCAACGCCCATCAAAGTACTTTTGGAGCCGGTTAGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169137.3 |
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| CDS-3UTR CCA 90 bp | GGACCGACGCCTGGACTAACCGGCTCCAAAAGTACTTTGATGGGCGTTGCTGTTTCCTTCCTCTGGGAGTaGTCCACTCTGGAGGCCTCT | + |
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Preference number: 4 (lower is better) Translates to: GPTPGLTGSKSTLMGVAVSFLWE*STLEAS Trigger: AGAGGCCTCCAGAGTGGACCACTCCCAGAGGAAGGA...AACAGCAACGCCCATCAAAGTACTTTTGGAGCCGGTTAGTCCAGGCGTCGGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113529.4 ENSMUST00000169137.3 ENSMUST00000178858.3 |
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| CDS-3UTR CCA 90 bp | CCTGGACTAACCGGCTCCAAAAGTACTTTGATGGGCGTTGCTGTTTCCAGGACCTCCTTCCTCTGGGAGTaGTCCACTCTGGAGGCCTCT | + |
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Preference number: 4 (lower is better) Translates to: PGLTGSKSTLMGVAVSRTSFLWE*STLEAS Trigger: AGAGGCCTCCAGAGTGGACCACTCCCAGAGGAAGGA...GGTCCTGGAAACAGCAACGCCCATCAAAGTACTTTTGGAGCCGGTTAGTCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113529.4 ENSMUST00000169137.3 ENSMUST00000178858.3 ENSMUST00000208801.2 |
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| CDS-3UTR CCA 90 bp | TGGACTAACCGGCTCCAAAAGTACTTTGATGGGCGTTGCTGTTTCCAGGACCCGTCCTTCCTCTGGGAGTaGTCCACTCTGGAGGCCTCT | + |
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Preference number: 4 (lower is better) Translates to: WTNRLQKYFDGRCCFQDPSFLWE*STLEAS Trigger: AGAGGCCTCCAGAGTGGACCACTCCCAGAGGAAGGA...CGGGTCCTGGAAACAGCAACGCCCATCAAAGTACTTTTGGAGCCGGTTAGTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113529.4 ENSMUST00000169137.3 ENSMUST00000178858.3 ENSMUST00000208801.2 |
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| CDS-3UTR CCA 90 bp | GGACTAACCGGCTCCAAAAGTACTTTGATGGGCGTTGCTGTTTCCAGGACCCGTTCCTTCCTCTGGGAGTaGTCCACTCTGGAGGCCTCT | + |
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Preference number: 4 (lower is better) Translates to: GLTGSKSTLMGVAVSRTRSFLWE*STLEAS Trigger: AGAGGCCTCCAGAGTGGACCACTCCCAGAGGAAGGA...ACGGGTCCTGGAAACAGCAACGCCCATCAAAGTACTTTTGGAGCCGGTTAGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113529.4 ENSMUST00000169137.3 ENSMUST00000178858.3 ENSMUST00000208801.2 |
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| CDS-3UTR CCA 90 bp | ACCGACGCCTGGACTAACCGGCTCCAAAAGTACTTTGATGGGCGTTGCTGTTTCGCAATGGAACGGGCATaGCAGGACCTGCACCTCTGT | + |
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Preference number: 4 (lower is better) Translates to: TDAWTNRLQKYFDGRCCFAMERA*QDLHLC Trigger: ACAGAGGTGCAGGTCCTGCCATGCCCGTTCCATTGC...GAAACAGCAACGCCCATCAAAGTACTTTTGGAGCCGGTTAGTCCAGGCGTCGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169137.3 |
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| CDS-3UTR GCA 90 bp | GCCTGGACTAACCGGCTCCAAAAGTACTTTGATGGGCGTTGCTGTTTCCAGGACGAATCCGGTGGCTGTTaGTGGCTGAGGACAAAGAGC | + |
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Preference number: 4 (lower is better) Translates to: AWTNRLQKYFDGRCCFQDESGGC*WLRTKS Trigger: GCTCTTTGTCCTCAGCCAGCAACAGCCACCGGATTC...GTCCTGGAAACAGCAACGCCCATCAAAGTACTTTTGGAGCCGGTTAGTCCAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113529.4 ENSMUST00000169137.3 ENSMUST00000178858.3 ENSMUST00000208801.2 |
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| CDS-3UTR CCA 90 bp | GCCTGGACTAACCGGCTCCAAAAGTACTTTGATGGGCGTTGCTGTTTCCAGGACTCCGGTGGCTGTTGCTaGCTGAGGACAAAGAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: AWTNRLQKYFDGRCCFQDSGGCC*LRTKSR Trigger: TCTGCTCTTTGTCCTCAGCCAGCAACAGCCACCGGA...GTCCTGGAAACAGCAACGCCCATCAAAGTACTTTTGGAGCCGGTTAGTCCAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113529.4 ENSMUST00000169137.3 ENSMUST00000178858.3 ENSMUST00000208801.2 |
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| CDS-3UTR CCA 90 bp | GGACTAACCGGCTCCAAAAGTACTTTGATGGGCGTTGCTGTTTCCAGGACCCGTTCCGGTGGCTGTTGCTaGCTGAGGACAAAGAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: GLTGSKSTLMGVAVSRTRSGGCC*LRTKSR Trigger: TCTGCTCTTTGTCCTCAGCCAGCAACAGCCACCGGA...ACGGGTCCTGGAAACAGCAACGCCCATCAAAGTACTTTTGGAGCCGGTTAGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113529.4 ENSMUST00000169137.3 ENSMUST00000178858.3 ENSMUST00000208801.2 |
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| CDS-3UTR CCA 90 bp | GGACCGACGCCTGGACTAACCGGCTCCAAAAGTACTTTGATGGGCGTTGCTGTTAATCTCTCCTTCCTCTaGGAGTGGTCCACTCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: GPTPGLTGSKSTLMGVAVNLSFL*EWSTLE Trigger: CTCCAGAGTGGACCACTCCCAGAGGAAGGAGAGATT...AACAGCAACGCCCATCAAAGTACTTTTGGAGCCGGTTAGTCCAGGCGTCGGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113529.4 ENSMUST00000169137.3 ENSMUST00000178858.3 |
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| CDS-3UTR CCA 90 bp | CCGACGCCTGGACTAACCGGCTCCAAAAGTACTTTGATGGGCGTTGCTGTTTCCAATCTCTCCTTCCTCTaGGAGTGGTCCACTCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: PTPGLTGSKSTLMGVAVSNLSFL*EWSTLE Trigger: CTCCAGAGTGGACCACTCCCAGAGGAAGGAGAGATT...GGAAACAGCAACGCCCATCAAAGTACTTTTGGAGCCGGTTAGTCCAGGCGTCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113529.4 ENSMUST00000169137.3 ENSMUST00000178858.3 |
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| CDS-3UTR CCA 90 bp | GACGCCTGGACTAACCGGCTCCAAAAGTACTTTGATGGGCGTTGCTGTTTCCAGAATCTCTCCTTCCTCTaGGAGTGGTCCACTCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: DAWTNRLQKYFDGRCCFQNLSFL*EWSTLE Trigger: CTCCAGAGTGGACCACTCCCAGAGGAAGGAGAGATT...CTGGAAACAGCAACGCCCATCAAAGTACTTTTGGAGCCGGTTAGTCCAGGCGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113529.4 ENSMUST00000169137.3 ENSMUST00000178858.3 |
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| CDS-3UTR CCA 90 bp | GCCTGGACTAACCGGCTCCAAAAGTACTTTGATGGGCGTTGCTGTTTCCAGGACAATCTCTCCTTCCTCTaGGAGTGGTCCACTCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: AWTNRLQKYFDGRCCFQDNLSFL*EWSTLE Trigger: CTCCAGAGTGGACCACTCCCAGAGGAAGGAGAGATT...GTCCTGGAAACAGCAACGCCCATCAAAGTACTTTTGGAGCCGGTTAGTCCAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113529.4 ENSMUST00000169137.3 ENSMUST00000178858.3 ENSMUST00000208801.2 |
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| CDS GCA 90 bp | GAGCTCAGTCGGCGGGCCAGCCGGCGCAGCAAGGGCAGGAGGTGCTaGCGGGCCAGGCGGGCAACAGGCAGCAGCAGGCGGGACAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: ELSRRASRRSKGRRC*RARRATGSSRRDSS Trigger: GCTGCTGTCCCGCCTGCTGCTGCCTGTTGCCCGCCTGGCCCGGCAGCACCTCCTGCCCTTGCTGCGCCGGCTGGCCCGCCGACTGAGCTC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000113529.4 ENSMUST00000169137.3 ENSMUST00000178858.3 ENSMUST00000208801.2 |
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| CDS GCA 90 bp | TGGGAGCTCAGTCGGCGGGCCAGCCGGCGCAGCAAGGGCAGGAGGTaGTGCCGGGCCAGGCGGGCAACAGGCAGCAGCAGGCGGGACAGC | + |
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Preference number: 5 (lower is better) Translates to: WELSRRASRRSKGRR*CRARRATGSSRRDS Trigger: GCTGTCCCGCCTGCTGCTGCCTGTTGCCCGCCTGGCCCGGCAGCACCTCCTGCCCTTGCTGCGCCGGCTGGCCCGCCGACTGAGCTCCCA 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000113529.4 ENSMUST00000169137.3 ENSMUST00000178858.3 ENSMUST00000208801.2 |
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| CDS CCA 90 bp | CTGAGGACAAAGAGCAGACAGCTCAGCAGAGCCTCTCTCATGTCTTaGGAGCTCAGTCGGCGGGCCAGCCGGCGCAGCAAGGGCAGGAGG | + |
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Preference number: 5 (lower is better) Translates to: LRTKSRQLSRASLMS*ELSRRASRRSKGRR Trigger: CCTCCTGCCCTTGCTGCGCCGGCTGGCCCGCCGACTGAGCTCCCAAGACATGAGAGAGGCTCTGCTGAGCTGTCTGCTCTTTGTCCTCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000113529.4 ENSMUST00000169137.3 ENSMUST00000178858.3 ENSMUST00000208801.2 |
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| CDS-3UTR CAA 90 bp | TGCGTGCGGACCGACGCCTGGACTAACCGGCTCCAAAAGTACTTTGATGGGCGTAGCCTCTCTCATGTCTaGGGAGCTCAGTCGGCGGGC | + |
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Preference number: 5 (lower is better) Translates to: CVRTDAWTNRLQKYFDGRSLSHV*GAQSAG Trigger: GCCCGCCGACTGAGCTCCCAAGACATGAGAGAGGCT...ACGCCCATCAAAGTACTTTTGGAGCCGGTTAGTCCAGGCGTCGGTCCGCACGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113529.4 ENSMUST00000169137.3 ENSMUST00000178858.3 |
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| CDS GCA 90 bp | TGGGAGTGGTCCACTCTGGAGGCCTCTCCAGAATCCGGTGGCTGTTaGTGGCTGAGGACAAAGAGCAGACAGCTCAGCAGAGCCTCTCTC | + |
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Preference number: 5 (lower is better) Translates to: WEWSTLEASPESGGC*WLRTKSRQLSRASL Trigger: GAGAGAGGCTCTGCTGAGCTGTCTGCTCTTTGTCCTCAGCCAGCAACAGCCACCGGATTCTGGAGAGGCCTCCAGAGTGGACCACTCCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000113529.4 ENSMUST00000169137.3 ENSMUST00000178858.3 ENSMUST00000208801.2 |
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| CDS CCA 90 bp | CTTCCTCTGGGAGTGGTCCACTCTGGAGGCCTCTCCAGAATCCGGTaGCTGTTGCTGGCTGAGGACAAAGAGCAGACAGCTCAGCAGAGC | + |
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Preference number: 5 (lower is better) Translates to: LPLGVVHSGGLSRIR*LLLAEDKEQTAQQS Trigger: GCTCTGCTGAGCTGTCTGCTCTTTGTCCTCAGCCAGCAACAGCCACCGGATTCTGGAGAGGCCTCCAGAGTGGACCACTCCCAGAGGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000113529.4 ENSMUST00000169137.3 ENSMUST00000178858.3 ENSMUST00000208801.2 |
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| CDS-3UTR CAA 90 bp | CGGACCGACGCCTGGACTAACCGGCTCCAAAAGTACTTTGATGGGCGTTGCTGTAGCCTCTCTCATGTCTaGGGAGCTCAGTCGGCGGGC | + |
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Preference number: 5 (lower is better) Translates to: RTDAWTNRLQKYFDGRCCSLSHV*GAQSAG Trigger: GCCCGCCGACTGAGCTCCCAAGACATGAGAGAGGCT...ACAGCAACGCCCATCAAAGTACTTTTGGAGCCGGTTAGTCCAGGCGTCGGTCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113529.4 ENSMUST00000169137.3 ENSMUST00000178858.3 |
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| CDS CCA 90 bp | GAGTGGTCCACTCTGGAGGCCTCTCCAGAATCCGGTGGCTGTTGCTaGCTGAGGACAAAGAGCAGACAGCTCAGCAGAGCCTCTCTCATG | + |
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Preference number: 5 (lower is better) Translates to: EWSTLEASPESGGCC*LRTKSRQLSRASLM Trigger: CATGAGAGAGGCTCTGCTGAGCTGTCTGCTCTTTGTCCTCAGCCAGCAACAGCCACCGGATTCTGGAGAGGCCTCCAGAGTGGACCACTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000113529.4 ENSMUST00000169137.3 ENSMUST00000178858.3 ENSMUST00000208801.2 |
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| CDS-3UTR CAA 90 bp | CCGACGCCTGGACTAACCGGCTCCAAAAGTACTTTGATGGGCGTTGCTGTTTCCAGCCTCTCTCATGTCTaGGGAGCTCAGTCGGCGGGC | + |
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Preference number: 5 (lower is better) Translates to: PTPGLTGSKSTLMGVAVSSLSHV*GAQSAG Trigger: GCCCGCCGACTGAGCTCCCAAGACATGAGAGAGGCT...GGAAACAGCAACGCCCATCAAAGTACTTTTGGAGCCGGTTAGTCCAGGCGTCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113529.4 ENSMUST00000169137.3 ENSMUST00000178858.3 |
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| CDS TCA 90 bp | GGTCCACTCTGGAGGCCTCTCCAGAATCCGGTGGCTGTTGCTGGCTaGGGACAAAGAGCAGACAGCTCAGCAGAGCCTCTCTCATGTCTT | + |
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Preference number: 5 (lower is better) Translates to: GPLWRPLQNPVAVAG*GQRADSSAEPLSCL Trigger: AAGACATGAGAGAGGCTCTGCTGAGCTGTCTGCTCTTTGTCCTCAGCCAGCAACAGCCACCGGATTCTGGAGAGGCCTCCAGAGTGGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000113529.4 ENSMUST00000169137.3 ENSMUST00000178858.3 ENSMUST00000208801.2 |
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| CDS-3UTR CAA 90 bp | TGGACTAACCGGCTCCAAAAGTACTTTGATGGGCGTTGCTGTTTCCAGGACCCGAGCCTCTCTCATGTCTaGGGAGCTCAGTCGGCGGGC | + |
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Preference number: 5 (lower is better) Translates to: WTNRLQKYFDGRCCFQDPSLSHV*GAQSAG Trigger: GCCCGCCGACTGAGCTCCCAAGACATGAGAGAGGCT...CGGGTCCTGGAAACAGCAACGCCCATCAAAGTACTTTTGGAGCCGGTTAGTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113529.4 ENSMUST00000169137.3 ENSMUST00000178858.3 ENSMUST00000208801.2 |
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| CDS CCA 90 bp | GGGACAGCAGCGATCGAAGCACCATCGGGAGCAATGGAACGGGCATaGCAGGACCTGCACCTCTGTACTCCCCAGTTTTCAACTGGATTA | + |
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Preference number: 5 (lower is better) Translates to: GTAAIEAPSGAMERA*QDLHLCTPQFSTGL Trigger: TAATCCAGTTGAAAACTGGGGAGTACAGAGGTGCAGGTCCTGCCATGCCCGTTCCATTGCTCCCGATGGTGCTTCGATCGCTGCTGTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169137.3 |
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| CDS-3UTR CAA 90 bp | ACTAACCGGCTCCAAAAGTACTTTGATGGGCGTTGCTGTTTCCAGGACCCGTGGAGAATCCGGTGGCTGTaGCTGGCTGAGGACAAAGAG | + |
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Preference number: 5 (lower is better) Translates to: TNRLQKYFDGRCCFQDPWRIRWL*LAEDKE Trigger: CTCTTTGTCCTCAGCCAGCAACAGCCACCGGATTCT...CCACGGGTCCTGGAAACAGCAACGCCCATCAAAGTACTTTTGGAGCCGGTTAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113529.4 ENSMUST00000169137.3 ENSMUST00000178858.3 ENSMUST00000208801.2 |
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| CDS CAA 90 bp | GCTGAGGACAAAGAGCAGACAGCTCAGCAGAGCCTCTCTCATGTCTaGGGAGCTCAGTCGGCGGGCCAGCCGGCGCAGCAAGGGCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: AEDKEQTAQQSLSHV*GAQSAGQPAQQGQE Trigger: CTCCTGCCCTTGCTGCGCCGGCTGGCCCGCCGACTGAGCTCCCAAGACATGAGAGAGGCTCTGCTGAGCTGTCTGCTCTTTGTCCTCAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000113529.4 ENSMUST00000169137.3 ENSMUST00000178858.3 ENSMUST00000208801.2 |
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| CDS CCA 72 bp | AAGAGCAGACAGCTCAGCAGAGCCTCTCTCATGTCTTaGGAGCTCAGTCGGCGGGCCAGCCGGCGCAGCAAG | + |
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Preference number: 6 (lower is better) Translates to: KSRQLSRASLMS*ELSRRASRRSK Trigger: CTTGCTGCGCCGGCTGGCCCGCCGACTGAGCTCCCAAGACATGAGAGAGGCTCTGCTGAGCTGTCTGCTCTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000113529.4 ENSMUST00000169137.3 ENSMUST00000178858.3 ENSMUST00000208801.2 |
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| CDS CCA 72 bp | GGCCCAATCTCTCCTTCCTCTGGGAGTGGTCCACTCTaGAGGCCTCTCCAGAATCCGGTGGCTGTTGCTGGC | + |
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Preference number: 6 (lower is better) Translates to: GPISPSSGSGPL*RPLQNPVAVAG Trigger: GCCAGCAACAGCCACCGGATTCTGGAGAGGCCTCCAGAGTGGACCACTCCCAGAGGAAGGAGAGATTGGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000113529.4 ENSMUST00000169137.3 ENSMUST00000178858.3 ENSMUST00000208801.2 |
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| CDS CCA 72 bp | CACTTCTGGGGGCCCAATCTCTCCTTCCTCTGGGAGTaGTCCACTCTGGAGGCCTCTCCAGAATCCGGTGGC | + |
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Preference number: 6 (lower is better) Translates to: HFWGPNLSFLWE*STLEASPESGG Trigger: GCCACCGGATTCTGGAGAGGCCTCCAGAGTGGACCACTCCCAGAGGAAGGAGAGATTGGGCCCCCAGAAGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000113529.4 ENSMUST00000169137.3 ENSMUST00000178858.3 ENSMUST00000208801.2 |
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| CDS CAA 72 bp | AAAGAGCAGACAGCTCAGCAGAGCCTCTCTCATGTCTaGGGAGCTCAGTCGGCGGGCCAGCCGGCGCAGCAA | + |
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Preference number: 6 (lower is better) Translates to: KEQTAQQSLSHV*GAQSAGQPAQQ Trigger: TTGCTGCGCCGGCTGGCCCGCCGACTGAGCTCCCAAGACATGAGAGAGGCTCTGCTGAGCTGTCTGCTCTTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000113529.4 ENSMUST00000169137.3 ENSMUST00000178858.3 ENSMUST00000208801.2 |
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| CDS CAA 90 bp | CTGGGAGTGGTCCACTCTGGAGGCCTCTCCAGAATCCGGTGGCTGTaGCTGGCTGAGGACAAAGAGCAGACAGCTCAGCAGAGCCTCTCT | + |
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Preference number: 6 (lower is better) Translates to: LGVVHSGGLSRIRWL*LAEDKEQTAQQSLS Trigger: AGAGAGGCTCTGCTGAGCTGTCTGCTCTTTGTCCTCAGCCAGCAACAGCCACCGGATTCTGGAGAGGCCTCCAGAGTGGACCACTCCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000113529.4 ENSMUST00000169137.3 ENSMUST00000178858.3 ENSMUST00000208801.2 |
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| CDS CCA 72 bp | ACTCTGGAGGCCTCTCCAGAATCCGGTGGCTGTTGCTaGCTGAGGACAAAGAGCAGACAGCTCAGCAGAGCC | + |
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Preference number: 6 (lower is better) Translates to: TLEASPESGGCC*LRTKSRQLSRA Trigger: GGCTCTGCTGAGCTGTCTGCTCTTTGTCCTCAGCCAGCAACAGCCACCGGATTCTGGAGAGGCCTCCAGAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000113529.4 ENSMUST00000169137.3 ENSMUST00000178858.3 ENSMUST00000208801.2 |
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| CDS CCA 72 bp | GGAGTGGTCCACTCTGGAGGCCTCTCCAGAATCCGGTaGCTGTTGCTGGCTGAGGACAAAGAGCAGACAGCT | + |
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Preference number: 6 (lower is better) Translates to: GVVHSGGLSRIR*LLLAEDKEQTA Trigger: AGCTGTCTGCTCTTTGTCCTCAGCCAGCAACAGCCACCGGATTCTGGAGAGGCCTCCAGAGTGGACCACTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000113529.4 ENSMUST00000169137.3 ENSMUST00000178858.3 ENSMUST00000208801.2 |
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| CDS CCA 72 bp | GCGATCGAAGCACCATCGGGAGCAATGGAACGGGCATaGCAGGACCTGCACCTCTGTACTCCCCAGTTTTCA | + |
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Preference number: 6 (lower is better) Translates to: AIEAPSGAMERA*QDLHLCTPQFS Trigger: TGAAAACTGGGGAGTACAGAGGTGCAGGTCCTGCCATGCCCGTTCCATTGCTCCCGATGGTGCTTCGATCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169137.3 |
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