Pregenerated sensors for MYLPF (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030672Ensembl transcript IDs: ENSMUST00000032910.13, ENSMUST00000206772.2
Found 23 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | TTGAGGGCCAGGGTGAGAGATGGAGCGGCTACAAGCCTATCTAGGTCTTCTGAGGTTGCCGCCCACGTCTaGGGGGAAGGCTGCCCACAT | + |
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Preference number: 4 (lower is better) Translates to: LRARVRDGAATSLSRSSEVAAHV*GEGCPH Trigger: ATGTGGGCAGCCTTCCCCCCAGACGTGGGCGGCAAC...CTCAGAAGACCTAGATAGGCTTGTAGCCGCTCCATCTCTCACCCTGGCCCTCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032910.13 ENSMUST00000206772.2 |
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| CDS-3UTR CCA 90 bp | TTGAGGGCCAGGGTGAGAGATGGAGCGGCTACAAGCCTATCTAGGTCTTCTGAGGGTGCCCTTCCCTTCTaGGTCCAGGACCTTGAAGGC | + |
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Preference number: 4 (lower is better) Translates to: LRARVRDGAATSLSRSSEGALPF*VQDLEG Trigger: GCCTTCAAGGTCCTGGACCCAGAAGGGAAGGGCACC...CTCAGAAGACCTAGATAGGCTTGTAGCCGCTCCATCTCTCACCCTGGCCCTCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032910.13 ENSMUST00000206772.2 |
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| CDS-3UTR CCA 90 bp | TTGAGGGCCAGGGTGAGAGATGGAGCGGCTACAAGCCTATCTAGGTCTTCTGAGACATGGAGAAGACGTTaGAGCTCCCTTCCGCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: LRARVRDGAATSLSRSSETWRRR*SSLPLL Trigger: CAGGAGCGGAAGGGAGCTCCAACGTCTTCTCCATGT...CTCAGAAGACCTAGATAGGCTTGTAGCCGCTCCATCTCTCACCCTGGCCCTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032910.13 |
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| CDS-3UTR GCA 90 bp | CAGTTGAGTTTTATTGAGGGCCAGGGTGAGAGATGGAGCGGCTACAAGCCTATCGCTCCCTTCCGCTCCTaGCCTTCTCTTGGCCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: QLSFIEGQGERWSGYKPIAPFRS*PSLGLL Trigger: AAGAAGGCCAAGAGAAGGGCAGGAGCGGAAGGGAGC...GATAGGCTTGTAGCCGCTCCATCTCTCACCCTGGCCCTCAATAAAACTCAACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032910.13 |
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| CDS-3UTR GCA 90 bp | AACAAAGACCAGTTGAGTTTTATTGAGGGCCAGGGTGAGAGATGGAGCGGCTACGAGACGGCCCATGGCTaGAAAGGTGTCCCGAAGATC | + |
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Preference number: 4 (lower is better) Translates to: NKDQLSFIEGQGERWSGYETAHG*KGVPKI Trigger: GATCTTCGGGACACCTTTGCAGCCATGGGCCGTCTC...GTAGCCGCTCCATCTCTCACCCTGGCCCTCAATAAAACTCAACTGGTCTTTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032910.13 ENSMUST00000206772.2 |
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| CDS-3UTR GCA 90 bp | TTGAGGGCCAGGGTGAGAGATGGAGCGGCTACAAGCCTATCTAGGTCTTCTGAGAGCTCCTCCAAGAACTaGTTTTTGATGGTGCCCTTC | + |
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Preference number: 4 (lower is better) Translates to: LRARVRDGAATSLSRSSESSSKN*FLMVPF Trigger: GAAGGGCACCATCAAAAAGCAGTTCTTGGAGGAGCT...CTCAGAAGACCTAGATAGGCTTGTAGCCGCTCCATCTCTCACCCTGGCCCTCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032910.13 ENSMUST00000206772.2 |
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| CDS-3UTR GCA 90 bp | AACAAAGACCAGTTGAGTTTTATTGAGGGCCAGGGTGAGAGATGGAGCGGCTACGAAAATCGGTCGCACTaGGTGGTAAGCAGCTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: NKDQLSFIEGQGERWSGYENRSH*VVSSSS Trigger: GGAGGAGCTGCTTACCACGCAGTGCGACCGATTTTC...GTAGCCGCTCCATCTCTCACCCTGGCCCTCAATAAAACTCAACTGGTCTTTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032910.13 ENSMUST00000206772.2 |
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| CDS-3UTR CCA 90 bp | GACCAGTTGAGTTTTATTGAGGGCCAGGGTGAGAGATGGAGCGGCTACAAGCCTGAGTCTGGTCAAACATaGAGAAGACGTTGGAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: DQLSFIEGQGERWSGYKPESGQT*RRRWSS Trigger: GGAGCTCCAACGTCTTCTCCATGTTTGACCAGACTC...AGGCTTGTAGCCGCTCCATCTCTCACCCTGGCCCTCAATAAAACTCAACTGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032910.13 |
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| CDS-3UTR TCA 90 bp | GACCAGTTGAGTTTTATTGAGGGCCAGGGTGAGAGATGGAGCGGCTACAAGCCTATGCCATCCCTGTTCTaGTCAATTACAGTGAACGCC | + |
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Preference number: 4 (lower is better) Translates to: DQLSFIEGQGERWSGYKPMPSLF*SITVNA Trigger: GGCGTTCACTGTAATTGATCAGAACAGGGATGGCAT...AGGCTTGTAGCCGCTCCATCTCTCACCCTGGCCCTCAATAAAACTCAACTGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032910.13 ENSMUST00000206772.2 |
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| CDS-3UTR GCA 90 bp | GACCAGTTGAGTTTTATTGAGGGCCAGGGTGAGAGATGGAGCGGCTACAAGCCTAGCTCCTCCAAGAACTaGTTTTTGATGGTGCCCTTC | + |
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Preference number: 4 (lower is better) Translates to: DQLSFIEGQGERWSGYKPSSSKN*FLMVPF Trigger: GAAGGGCACCATCAAAAAGCAGTTCTTGGAGGAGCT...AGGCTTGTAGCCGCTCCATCTCTCACCCTGGCCCTCAATAAAACTCAACTGGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032910.13 ENSMUST00000206772.2 |
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| CDS-3UTR TCA 90 bp | CAGTTGAGTTTTATTGAGGGCCAGGGTGAGAGATGGAGCGGCTACAAGCCTATCATGCCATCCCTGTTCTaGTCAATTACAGTGAACGCC | + |
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Preference number: 4 (lower is better) Translates to: QLSFIEGQGERWSGYKPIMPSLF*SITVNA Trigger: GGCGTTCACTGTAATTGATCAGAACAGGGATGGCAT...GATAGGCTTGTAGCCGCTCCATCTCTCACCCTGGCCCTCAATAAAACTCAACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032910.13 ENSMUST00000206772.2 |
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| CDS-3UTR TCA 90 bp | AAAGACCAGTTGAGTTTTATTGAGGGCCAGGGTGAGAGATGGAGCGGCTACAAGCCAAGAACTGCTTTTTaGTGGTGCCCTTCCCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: KDQLSFIEGQGERWSGYKPRTAF*WCPSLL Trigger: CAGAAGGGAAGGGCACCATCAAAAAGCAGTTCTTGG...CTTGTAGCCGCTCCATCTCTCACCCTGGCCCTCAATAAAACTCAACTGGTCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032910.13 ENSMUST00000206772.2 |
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| CDS CCA 90 bp | AAGCAGCTCCTCCAAGAACTGCTTTTTGATGGTGCCCTTCCCTTCTaGGTCCAGGACCTTGAAGGCTCCAGTGATCACATCCTCCGGGTC | + |
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Preference number: 5 (lower is better) Translates to: KQLLQELLFDGALPF*VQDLEGSSDHILRV Trigger: GACCCGGAGGATGTGATCACTGGAGCCTTCAAGGTCCTGGACCCAGAAGGGAAGGGCACCATCAAAAAGCAGTTCTTGGAGGAGCTGCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032910.13 ENSMUST00000206772.2 |
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| CDS GCA 90 bp | GCTGCCCACATGTTCTTGATCTCCTCCTGGGAAAATCGGTCGCACTaGGTGGTAAGCAGCTCCTCCAAGAACTGCTTTTTGATGGTGCCC | + |
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Preference number: 5 (lower is better) Translates to: AAHMFLISSWENRSH*VVSSSSKNCFLMVP Trigger: GGGCACCATCAAAAAGCAGTTCTTGGAGGAGCTGCTTACCACGCAGTGCGACCGATTTTCCCAGGAGGAGATCAAGAACATGTGGGCAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032910.13 ENSMUST00000206772.2 |
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| CDS-3UTR CAA 90 bp | AGGGCCAGGGTGAGAGATGGAGCGGCTACAAGCCTATCTAGGTCTTCTGAGACCGCTGCCCACATGTTCTaGATCTCCTCCTGGGAAAAT | + |
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Preference number: 5 (lower is better) Translates to: RARVRDGAATSLSRSSETAAHMF*ISSWEN Trigger: ATTTTCCCAGGAGGAGATCAAGAACATGTGGGCAGC...GGTCTCAGAAGACCTAGATAGGCTTGTAGCCGCTCCATCTCTCACCCTGGCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032910.13 ENSMUST00000206772.2 |
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| CDS-3UTR CAA 90 bp | CAGTTGAGTTTTATTGAGGGCCAGGGTGAGAGATGGAGCGGCTACAAGCCTATCAACATGGAGAAGACGTaGGAGCTCCCTTCCGCTCCT | + |
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Preference number: 5 (lower is better) Translates to: QLSFIEGQGERWSGYKPINMEKT*ELPSAP Trigger: AGGAGCGGAAGGGAGCTCCAACGTCTTCTCCATGTT...GATAGGCTTGTAGCCGCTCCATCTCTCACCCTGGCCCTCAATAAAACTCAACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032910.13 |
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| CDS-3UTR CAA 90 bp | GTTTTATTGAGGGCCAGGGTGAGAGATGGAGCGGCTACAAGCCTATCTAGGTCTTCTGGGTCCAGGACCTaGAAGGCTCCAGTGATCACA | + |
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Preference number: 5 (lower is better) Translates to: VLLRARVRDGAATSLSRSSGSRT*KAPVIT Trigger: TGTGATCACTGGAGCCTTCAAGGTCCTGGACCCAGA...AGACCTAGATAGGCTTGTAGCCGCTCCATCTCTCACCCTGGCCCTCAATAAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032910.13 ENSMUST00000206772.2 |
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| CDS-3UTR CAA 90 bp | CAGTTGAGTTTTATTGAGGGCCAGGGTGAGAGATGGAGCGGCTACAAGCCTATCTCTGGGTCCAGGACCTaGAAGGCTCCAGTGATCACA | + |
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Preference number: 5 (lower is better) Translates to: QLSFIEGQGERWSGYKPISGSRT*KAPVIT Trigger: TGTGATCACTGGAGCCTTCAAGGTCCTGGACCCAGA...GATAGGCTTGTAGCCGCTCCATCTCTCACCCTGGCCCTCAATAAAACTCAACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032910.13 ENSMUST00000206772.2 |
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| CDS-3UTR CAA 90 bp | GTTTTATTGAGGGCCAGGGTGAGAGATGGAGCGGCTACAAGCCTATCTAGGTCTTCCTCATTCTTCACATaGAGACGGCCCATGGCTGCA | + |
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Preference number: 5 (lower is better) Translates to: VLLRARVRDGAATSLSRSSSFFT*RRPMAA Trigger: TGCAGCCATGGGCCGTCTCAATGTGAAGAATGAGGA...AGACCTAGATAGGCTTGTAGCCGCTCCATCTCTCACCCTGGCCCTCAATAAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032910.13 ENSMUST00000206772.2 |
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| CDS-3UTR CAA 90 bp | AACAAAGACCAGTTGAGTTTTATTGAGGGCCAGGGTGAGAGATGGAGCGGCTACTCCTCATTCTTCACATaGAGACGGCCCATGGCTGCA | + |
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Preference number: 5 (lower is better) Translates to: NKDQLSFIEGQGERWSGYSSFFT*RRPMAA Trigger: TGCAGCCATGGGCCGTCTCAATGTGAAGAATGAGGA...GTAGCCGCTCCATCTCTCACCCTGGCCCTCAATAAAACTCAACTGGTCTTTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032910.13 ENSMUST00000206772.2 |
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| CDS-3UTR CAA 90 bp | TTATTGAGGGCCAGGGTGAGAGATGGAGCGGCTACAAGCCTATCTAGGTCTTCTTCCAAGAACTGCTTTTaGATGGTGCCCTTCCCTTCT | + |
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Preference number: 5 (lower is better) Translates to: LLRARVRDGAATSLSRSSSKNCF*MVPFPS Trigger: AGAAGGGAAGGGCACCATCAAAAAGCAGTTCTTGGA...AGAAGACCTAGATAGGCTTGTAGCCGCTCCATCTCTCACCCTGGCCCTCAATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032910.13 ENSMUST00000206772.2 |
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| CDS-3UTR CAA 90 bp | AAAGACCAGTTGAGTTTTATTGAGGGCCAGGGTGAGAGATGGAGCGGCTACAAGGCTGCCCACATGTTCTaGATCTCCTCCTGGGAAAAT | + |
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Preference number: 5 (lower is better) Translates to: KDQLSFIEGQGERWSGYKAAHMF*ISSWEN Trigger: ATTTTCCCAGGAGGAGATCAAGAACATGTGGGCAGC...CTTGTAGCCGCTCCATCTCTCACCCTGGCCCTCAATAAAACTCAACTGGTCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032910.13 ENSMUST00000206772.2 |
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| CDS-3UTR CAA 90 bp | AACAAAGACCAGTTGAGTTTTATTGAGGGCCAGGGTGAGAGATGGAGCGGCTACTCCAAGAACTGCTTTTaGATGGTGCCCTTCCCTTCT | + |
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Preference number: 5 (lower is better) Translates to: NKDQLSFIEGQGERWSGYSKNCF*MVPFPS Trigger: AGAAGGGAAGGGCACCATCAAAAAGCAGTTCTTGGA...GTAGCCGCTCCATCTCTCACCCTGGCCCTCAATAAAACTCAACTGGTCTTTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032910.13 ENSMUST00000206772.2 |
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