Pregenerated sensors for MYLK4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044951Ensembl transcript IDs: ENSMUST00000057428.13, ENSMUST00000230119.2, ENSMUST00000238977.3
Found 252 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTGCTGCGGCTCCAAGCAGCTTTGGTAGAACTAAGAAGCCTCTTGTaGCCAAAGAGCGTGGAGAAGAAGACAGCACCCCAAATCCCGATG | + |
|
Preference number: 1 (lower is better) Translates to: VLRLQAALVELRSLL*PKSVEKKTAPQIPM Trigger: CATCGGGATTTGGGGTGCTGTCTTCTTCTCCACGCTCTTTGGGCACAAGAGGCTTCTTAGTTCTACCAAAGCTGCTTGGAGCCGCAGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR TCA 90 bp | TTTCCATTTACCCAGAGGCTGGAGTCACTTTCTAGACACTGCCCCTaGACACTGCACATTGTAATTCCCTGGATGCACAGACGCAGCTCC | + |
|
Preference number: 1 (lower is better) Translates to: FPFTQRLESLSRHCP*TLHIVIPWMHRRSS Trigger: GGAGCTGCGTCTGTGCATCCAGGGAATTACAATGTGCAGTGTTCAGGGGCAGTGTCTAGAAAGTGACTCCAGCCTCTGGGTAAATGGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR TCA 90 bp | CATGAGGGTTTGGCAGTTAGTCAAGGGTCTCAAGTCAGCCCCGGGTaGCAGGGCCACTTGGCTATTCTTACCATTACAATTGTGACATCA | + |
|
Preference number: 1 (lower is better) Translates to: HEGLAVSQGSQVSPG*QGHLAILTITIVTS Trigger: TGATGTCACAATTGTAATGGTAAGAATAGCCAAGTGGCCCTGTCACCCGGGGCTGACTTGAGACCCTTGACTAACTGCCAAACCCTCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR TCA 90 bp | CTGCACATTGTAATTCCCTGGATGCACAGACGCAGCTCCTTCTGGTaGCACCTAGGTCTTGAGGGAAGCTCTTATGGCTATCTTTTGAAG | + |
|
Preference number: 1 (lower is better) Translates to: LHIVIPWMHRRSSFW*HLGLEGSSYGYLLK Trigger: CTTCAAAAGATAGCCATAAGAGCTTCCCTCAAGACCTAGGTGTCACCAGAAGGAGCTGCGTCTGTGCATCCAGGGAATTACAATGTGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR GCA 90 bp | AAGAGCCTGAATGTCAGTGGAATTTCAGGGAGTTTTGCAAAGTCTTaGCCCAAGCCATCCTGTTCCCTAAAGGCTACCTACAGTGGTGCT | + |
|
Preference number: 1 (lower is better) Translates to: KSLNVSGISGSFAKS*PKPSCSLKATYSGA Trigger: AGCACCACTGTAGGTAGCCTTTAGGGAACAGGATGGCTTGGGGCAAGACTTTGCAAAACTCCCTGAAATTCCACTGACATTCAGGCTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR GCA 90 bp | CAGGCTCAGGGAGAATCCATGCCCGCAACTGAAAATGCCTTTCTATaGAGCGTTTTCAACCAGACCTTTGTGTCCCATTTAGCATTTGAG | + |
|
Preference number: 1 (lower is better) Translates to: QAQGESMPATENAFL*SVFNQTFVSHLAFE Trigger: CTCAAATGCTAAATGGGACACAAAGGTCTGGTTGAAAACGCTGCATAGAAAGGCATTTTCAGTTGCGGGCATGGATTCTCCCTGAGCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR CCA 90 bp | AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTTCAGAATGCATaGAAGGTACCACATGTGATGGCTGATCTTGCCTTAGAAAGAAGC | + |
|
Preference number: 1 (lower is better) Translates to: RERERERERERVQNA*KVPHVMADLALERS Trigger: GCTTCTTTCTAAGGCAAGATCAGCCATCACATGTGGTACCTTCCATGCATTCTGAACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR CCA 90 bp | CCCTGTAAAATGGTGGGGAATGAATCTGAACATGGAATCAGCTACTaGGTAGAAACTGTTGCACTTGAGAGAGAGAGAGAGAGAGAGAGA | + |
|
Preference number: 1 (lower is better) Translates to: PCKMVGNESEHGISY*VETVALERERERER Trigger: TCTCTCTCTCTCTCTCTCTCTCTCAAGTGCAACAGTTTCTACCCAGTAGCTGATTCCATGTTCAGATTCATTCCCCACCATTTTACAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR GCA 90 bp | GGTGTGAATCTTAAACCCAGTATCACCCATCCACTGAAGGCACTTTaGCATTTGGAAAAGAAATTCTCATCTCAAAAAGGTCACAGTGGT | + |
|
Preference number: 1 (lower is better) Translates to: GVNLKPSITHPLKAL*HLEKKFSSQKGHSG Trigger: ACCACTGTGACCTTTTTGAGATGAGAATTTCTTTTCCAAATGGCAAAGTGCCTTCAGTGGATGGGTGATACTGGGTTTAAGATTCACACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR TCA 90 bp | GCTGGTTGGAACAAGCAGAGTTTTACACATAGCACAACAGTGAAATaGTACTGGCCTTCACTAAATGGTACCTACTTACCCTTTACTTTG | + |
|
Preference number: 1 (lower is better) Translates to: AGWNKQSFTHSTTVK*YWPSLNGTYLPFTL Trigger: CAAAGTAAAGGGTAAGTAGGTACCATTTAGTGAAGGCCAGTATCATTTCACTGTTGTGCTATGTGTAAAACTCTGCTTGTTCCAACCAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR TCA 90 bp | CATGTCCAACTTCTCCACACACGGGTTAGGTATCTGTTGTTCTTTTaGATGTGCTTAAGCCTTCAATATATAAAGATCATTTATAGAAAC | + |
|
Preference number: 1 (lower is better) Translates to: HVQLLHTRVRYLLFF*MCLSLQYIKIIYRN Trigger: GTTTCTATAAATGATCTTTATATATTGAAGGCTTAAGCACATTCAAAAGAACAACAGATACCTAACCCGTGTGTGGAGAAGTTGGACATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR-3UTR GCA 90 bp | CTTTCACTGAGCAGCCTCCCGTGGGTGTGGATCGAGGGGACAGACAAAGCCAGATGCCCATGCTATGGCTaGCAGTCATCCCAGGGGTCA | + |
|
Preference number: 2 (lower is better) Translates to: LSLSSLPWVWIEGTDKARCPCYG*QSSQGS Trigger: TGACCCCTGGGATGACTGGCAGCCATAGCATGGGCA...TCTGGCTTTGTCTGTCCCCTCGATCCACACCCACGGGAGGCTGCTCAGTGAAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR-3UTR CCA 90 bp | ACATGTGCTGCGGCTCCAAGCAGCTTTGGTAGAACTAAGAAGCCTCTTGTGCCCATGTGGGCATCTGCCTaGGCCCCTAGGGAGCAGCCC | + |
|
Preference number: 2 (lower is better) Translates to: TCAAAPSSFGRTKKPLVPMWASA*APREQP Trigger: GGGCTGCTCCCTAGGGGCCCAGGCAGATGCCCACAT...GGGCACAAGAGGCTTCTTAGTTCTACCAAAGCTGCTTGGAGCCGCAGCACATGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR-3UTR GCA 90 bp | CTTTCACTGAGCAGCCTCCCGTGGGTGTGGATCGAGGGGACAGACAAAGCCAGAGTTCAAGGCTGCCCATaGTATGGCTGCCAGTCATCC | + |
|
Preference number: 2 (lower is better) Translates to: LSLSSLPWVWIEGTDKARVQGCP*YGCQSS Trigger: GGATGACTGGCAGCCATAGCATGGGCAGCCTTGAAC...TCTGGCTTTGTCTGTCCCCTCGATCCACACCCACGGGAGGCTGCTCAGTGAAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR-3UTR GCA 90 bp | ACTGAGCAGCCTCCCGTGGGTGTGGATCGAGGGGACAGACAAAGCCAGACTAACTGCATAAAACGATCTTaGTGGAGCGGGGTACCCACC | + |
|
Preference number: 2 (lower is better) Translates to: TEQPPVGVDRGDRQSQTNCIKRS*WSGVPT Trigger: GGTGGGTACCCCGCTCCAGCAAGATCGTTTTATGCA...GTTAGTCTGGCTTTGTCTGTCCCCTCGATCCACACCCACGGGAGGCTGCTCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR-3UTR GCA 90 bp | CTTTCACTGAGCAGCCTCCCGTGGGTGTGGATCGAGGGGACAGACAAAGCCAGATGCATAAAACGATCTTaGTGGAGCGGGGTACCCACC | + |
|
Preference number: 2 (lower is better) Translates to: LSLSSLPWVWIEGTDKARCIKRS*WSGVPT Trigger: GGTGGGTACCCCGCTCCAGCAAGATCGTTTTATGCA...TCTGGCTTTGTCTGTCCCCTCGATCCACACCCACGGGAGGCTGCTCAGTGAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR-3UTR TCA 90 bp | CTTTCACTGAGCAGCCTCCCGTGGGTGTGGATCGAGGGGACAGACAAAGCCAGAGGCATGAAAGGGCAATaGGGAGGTGTTAGCTATTGG | + |
|
Preference number: 2 (lower is better) Translates to: LSLSSLPWVWIEGTDKARGMKGQ*GGVSYW Trigger: CCAATAGCTAACACCTCCTCATTGCCCTTTCATGCC...TCTGGCTTTGTCTGTCCCCTCGATCCACACCCACGGGAGGCTGCTCAGTGAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR CAA 90 bp | GATGACTGGGGCCACAGAGCTGGCATCTGCATTGATTGGCCAGCTTaGCAAAGCCCCTTTCCCATCAGAGCCGACATCATAGGCTTTCAC | + |
|
Preference number: 2 (lower is better) Translates to: DDWGHRAGICIDWPA*QSPFPIRADIIGFH Trigger: GTGAAAGCCTATGATGTCGGCTCTGATGGGAAAGGGGCTTTGCAAAGCTGGCCAATCAATGCAGATGCCAGCTCTGTGGCCCCAGTCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR CAA 90 bp | CATGTGCTGCGGCTCCAAGCAGCTTTGGTAGAACTAAGAAGCCTCTaGTGCCCAAAGAGCGTGGAGAAGAAGACAGCACCCCAAATCCCG | + |
|
Preference number: 2 (lower is better) Translates to: HVLRLQAALVELRSL*CPKSVEKKTAPQIP Trigger: CGGGATTTGGGGTGCTGTCTTCTTCTCCACGCTCTTTGGGCACAAGAGGCTTCTTAGTTCTACCAAAGCTGCTTGGAGCCGCAGCACATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR-3UTR GCA 90 bp | CTTGGAAAAGTAGATGACTGGGGCCACAGAGCTGGCATCTGCATTGATTGGCCATGCCCATGCTATGGCTaGCAGTCATCCCAGGGGTCA | + |
|
Preference number: 2 (lower is better) Translates to: LGKVDDWGHRAGICIDWPCPCYG*QSSQGS Trigger: TGACCCCTGGGATGACTGGCAGCCATAGCATGGGCA...TGGCCAATCAATGCAGATGCCAGCTCTGTGGCCCCAGTCATCTACTTTTCCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR-3UTR CCA 90 bp | CCACATGTGATGGCTGATCTTGCCTTAGAAAGAAGCCTTATGTTCCAGCAAGCTATGTGGGCATCTGCCTaGGCCCCTAGGGAGCAGCCC | + |
|
Preference number: 2 (lower is better) Translates to: PHVMADLALERSLMFQQAMWASA*APREQP Trigger: GGGCTGCTCCCTAGGGGCCCAGGCAGATGCCCACAT...AGCTTGCTGGAACATAAGGCTTCTTTCTAAGGCAAGATCAGCCATCACATGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR-3UTR TCA 90 bp | ACATGTGCTGCGGCTCCAAGCAGCTTTGGTAGAACTAAGAAGCCTCTTGTGCCCTCTTGGAAAAGTAGATaGCTGGGGCCACAGAGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: TCAAAPSSFGRTKKPLVPSWKSR*LGPQSW Trigger: CCAGCTCTGTGGCCCCAGTCATCTACTTTTCCAAGA...GGGCACAAGAGGCTTCTTAGTTCTACCAAAGCTGCTTGGAGCCGCAGCACATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR-3UTR GCA 90 bp | CTTGGAAAAGTAGATGACTGGGGCCACAGAGCTGGCATCTGCATTGATTGGCCAGTTCAAGGCTGCCCATaGTATGGCTGCCAGTCATCC | + |
|
Preference number: 2 (lower is better) Translates to: LGKVDDWGHRAGICIDWPVQGCP*YGCQSS Trigger: GGATGACTGGCAGCCATAGCATGGGCAGCCTTGAAC...TGGCCAATCAATGCAGATGCCAGCTCTGTGGCCCCAGTCATCTACTTTTCCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR-3UTR GCA 90 bp | ACTGAGCAGCCTCCCGTGGGTGTGGATCGAGGGGACAGACAAAGCCAGACTAACAATTTCAGGGAGTTTTaGAAAGTCTTGCCCCAAGCC | + |
|
Preference number: 2 (lower is better) Translates to: TEQPPVGVDRGDRQSQTNNFREF*KVLPQA Trigger: GGCTTGGGGCAAGACTTTGCAAAACTCCCTGAAATT...GTTAGTCTGGCTTTGTCTGTCCCCTCGATCCACACCCACGGGAGGCTGCTCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR-3UTR CCA 90 bp | CTTTCACTGAGCAGCCTCCCGTGGGTGTGGATCGAGGGGACAGACAAAGCCAGACATTTACCCAGAGGCTaGAGTCACTTTCTAGACACT | + |
|
Preference number: 2 (lower is better) Translates to: LSLSSLPWVWIEGTDKARHLPRG*SHFLDT Trigger: AGTGTCTAGAAAGTGACTCCAGCCTCTGGGTAAATG...TCTGGCTTTGTCTGTCCCCTCGATCCACACCCACGGGAGGCTGCTCAGTGAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR-3UTR CCA 90 bp | ACTGAGCAGCCTCCCGTGGGTGTGGATCGAGGGGACAGACAAAGCCAGACTAACTTGTGGAAATTCAGGTaGCCAAGAACTCTTGCCTGT | + |
|
Preference number: 2 (lower is better) Translates to: TEQPPVGVDRGDRQSQTNLWKFR*PRTLAC Trigger: ACAGGCAAGAGTTCTTGGCCACCTGAATTTCCACAA...GTTAGTCTGGCTTTGTCTGTCCCCTCGATCCACACCCACGGGAGGCTGCTCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR-3UTR TCA 90 bp | ACATGTGCTGCGGCTCCAAGCAGCTTTGGTAGAACTAAGAAGCCTCTTGTGCCCACCTGTCCCAGCTTGTaGGTGTGTATGTGTGTGTGT | + |
|
Preference number: 2 (lower is better) Translates to: TCAAAPSSFGRTKKPLVPTCPSL*VCMCVC Trigger: ACACACACACATACACACTCACAAGCTGGGACAGGT...GGGCACAAGAGGCTTCTTAGTTCTACCAAAGCTGCTTGGAGCCGCAGCACATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR-3UTR CCA 90 bp | CTTGGAAAAGTAGATGACTGGGGCCACAGAGCTGGCATCTGCATTGATTGGCCACCTCTGAACACTAAGTaGGATGTGGGCATCTGCCTG | + |
|
Preference number: 2 (lower is better) Translates to: LGKVDDWGHRAGICIDWPPLNTK*DVGICL Trigger: CAGGCAGATGCCCACATCCCACTTAGTGTTCAGAGG...TGGCCAATCAATGCAGATGCCAGCTCTGTGGCCCCAGTCATCTACTTTTCCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR CAA 90 bp | CCTAGAGCCCAAACTAAACAAGAAAATGTATGCACACTGCACCCCTaGCTCAGGGAGGGCGTGACAGGGAGCACTCAGAGAAGAAGGAAT | + |
|
Preference number: 2 (lower is better) Translates to: PRAQTKQENVCTLHP*LREGVTGSTQRRRN Trigger: ATTCCTTCTTCTCTGAGTGCTCCCTGTCACGCCCTCCCTGAGCAAGGGGTGCAGTGTGCATACATTTTCTTGTTTAGTTTGGGCTCTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR-3UTR TCA 90 bp | TGCCCCAAGCCATCCTGTTCCCTAAAGGCTACCTACAGTGGTGCTCATATATCCGTGACACCTAGGTCTTaGGGGAAGCTCTTATGGCTA | + |
|
Preference number: 2 (lower is better) Translates to: CPKPSCSLKATYSGAHISVTPRS*GKLLWL Trigger: TAGCCATAAGAGCTTCCCTCAAGACCTAGGTGTCAC...GGATATATGAGCACCACTGTAGGTAGCCTTTAGGGAACAGGATGGCTTGGGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR-3UTR TCA 90 bp | CTTGGAAAAGTAGATGACTGGGGCCACAGAGCTGGCATCTGCATTGATTGGCCAGTGACACCTAGGTCTTaGGGGAAGCTCTTATGGCTA | + |
|
Preference number: 2 (lower is better) Translates to: LGKVDDWGHRAGICIDWPVTPRS*GKLLWL Trigger: TAGCCATAAGAGCTTCCCTCAAGACCTAGGTGTCAC...TGGCCAATCAATGCAGATGCCAGCTCTGTGGCCCCAGTCATCTACTTTTCCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR-3UTR TCA 90 bp | ACATGTGCTGCGGCTCCAAGCAGCTTTGGTAGAACTAAGAAGCCTCTTGTGCCCACCTTGGATGACACATaGGCCAAAAGAAAGGAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: TCAAAPSSFGRTKKPLVPTLDDT*AKRKEQ Trigger: CTGCTCCTTTCTTTTGGCTCATGTGTCATCCAAGGT...GGGCACAAGAGGCTTCTTAGTTCTACCAAAGCTGCTTGGAGCCGCAGCACATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR-3UTR TCA 90 bp | GCTATGGCTGCCAGTCATCCCAGGGGTCAAGGCACCAGAACTGCTGATTTTTCCCAGCAGTTTTCCTTTTaGATAGGCTCCTTTCATGGA | + |
|
Preference number: 2 (lower is better) Translates to: AMAASHPRGQGTRTADFSQQFSF*IGSFHG Trigger: TCCATGAAAGGAGCCTATTCAAAAGGAAAACTGCTG...GGAAAAATCAGCAGTTCTGGTGCCTTGACCCCTGGGATGACTGGCAGCCATAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR-3UTR TCA 90 bp | GCTATCTTCAGGCTCTTTCTTTCTAAACAGCACATGTGCTGCGGCTCCAAGCAGACCTGTCCCAGCTTGTaGGTGTGTATGTGTGTGTGT | + |
|
Preference number: 2 (lower is better) Translates to: AIFRLFLSKQHMCCGSKQTCPSL*VCMCVC Trigger: ACACACACACATACACACTCACAAGCTGGGACAGGT...CTGCTTGGAGCCGCAGCACATGTGCTGTTTAGAAAGAAAGAGCCTGAAGATAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR-3UTR TCA 90 bp | CTTGGAAAAGTAGATGACTGGGGCCACAGAGCTGGCATCTGCATTGATTGGCCACATTTAGCATTTGAGTaGGTACCAGCCTGCTGTGGT | + |
|
Preference number: 2 (lower is better) Translates to: LGKVDDWGHRAGICIDWPHLAFE*VPACCG Trigger: ACCACAGCAGGCTGGTACTCACTCAAATGCTAAATG...TGGCCAATCAATGCAGATGCCAGCTCTGTGGCCCCAGTCATCTACTTTTCCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR-3UTR GCA 90 bp | GCTATCTTCAGGCTCTTTCTTTCTAAACAGCACATGTGCTGCGGCTCCAAGCAGCTAAGAAGCCTCTTGTaGCCAAAGAGCGTGGAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: AIFRLFLSKQHMCCGSKQLRSLL*PKSVEK Trigger: CTTCTCCACGCTCTTTGGGCACAAGAGGCTTCTTAG...CTGCTTGGAGCCGCAGCACATGTGCTGTTTAGAAAGAAAGAGCCTGAAGATAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR-3UTR CCA 90 bp | GCTATCTTCAGGCTCTTTCTTTCTAAACAGCACATGTGCTGCGGCTCCAAGCAGCACATTGTAATTCCCTaGATGCACAGACGCAGCTCC | + |
|
Preference number: 2 (lower is better) Translates to: AIFRLFLSKQHMCCGSKQHIVIP*MHRRSS Trigger: GGAGCTGCGTCTGTGCATCCAGGGAATTACAATGTG...CTGCTTGGAGCCGCAGCACATGTGCTGTTTAGAAAGAAAGAGCCTGAAGATAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR-3UTR CCA 90 bp | CTTGGAAAAGTAGATGACTGGGGCCACAGAGCTGGCATCTGCATTGATTGGCCAAGTACCAGCCTGCTGTaGTCAAGGAGGATTAATGTG | + |
|
Preference number: 2 (lower is better) Translates to: LGKVDDWGHRAGICIDWPSTSLL*SRRINV Trigger: CACATTAATCCTCCTTGACCACAGCAGGCTGGTACT...TGGCCAATCAATGCAGATGCCAGCTCTGTGGCCCCAGTCATCTACTTTTCCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR-3UTR TCA 90 bp | ACATGTGCTGCGGCTCCAAGCAGCTTTGGTAGAACTAAGAAGCCTCTTGTGCCCTGGGAAATAAGAGCCTaGATGTCAGTGGAATTTCAG | + |
|
Preference number: 2 (lower is better) Translates to: TCAAAPSSFGRTKKPLVPWEIRA*MSVEFQ Trigger: CTGAAATTCCACTGACATTCAGGCTCTTATTTCCCA...GGGCACAAGAGGCTTCTTAGTTCTACCAAAGCTGCTTGGAGCCGCAGCACATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR-3UTR GCA 90 bp | AGAAGCCAAAAAGGCAGAGAAACATCTTCCCCTCTGAACACTAAGTGGGATGTGGTTCAAGTTCAAGGCTaGCCATGCTATGGCTGCCAG | + |
|
Preference number: 2 (lower is better) Translates to: RSQKGRETSSPLNTKWDVVQVQG*PCYGCQ Trigger: CTGGCAGCCATAGCATGGGCAGCCTTGAACTTGAAC...CACATCCCACTTAGTGTTCAGAGGGGAAGATGTTTCTCTGCCTTTTTGGCTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR-3UTR GCA 90 bp | CTTTCACTGAGCAGCCTCCCGTGGGTGTGGATCGAGGGGACAGACAAAGCCAGATGTTGTCAATACAATTaGCCACTTGAGAAACATAGT | + |
|
Preference number: 2 (lower is better) Translates to: LSLSSLPWVWIEGTDKARCCQYN*PLEKHS Trigger: ACTATGTTTCTCAAGTGGGCAATTGTATTGACAACA...TCTGGCTTTGTCTGTCCCCTCGATCCACACCCACGGGAGGCTGCTCAGTGAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR-3UTR GCA 90 bp | ACATGTGCTGCGGCTCCAAGCAGCTTTGGTAGAACTAAGAAGCCTCTTGTGCCCGAAAATGCCTTTCTATaGAGCGTTTTCAACCAGACC | + |
|
Preference number: 2 (lower is better) Translates to: TCAAAPSSFGRTKKPLVPENAFL*SVFNQT Trigger: GGTCTGGTTGAAAACGCTGCATAGAAAGGCATTTTC...GGGCACAAGAGGCTTCTTAGTTCTACCAAAGCTGCTTGGAGCCGCAGCACATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR-3UTR GCA 90 bp | GCTATCTTCAGGCTCTTTCTTTCTAAACAGCACATGTGCTGCGGCTCCAAGCAGTTGATTGGCCAGCTTTaGAAAGCCCCTTTCCCATCA | + |
|
Preference number: 2 (lower is better) Translates to: AIFRLFLSKQHMCCGSKQLIGQL*KAPFPS Trigger: TGATGGGAAAGGGGCTTTGCAAAGCTGGCCAATCAA...CTGCTTGGAGCCGCAGCACATGTGCTGTTTAGAAAGAAAGAGCCTGAAGATAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR-3UTR CCA 90 bp | GCTATCTTCAGGCTCTTTCTTTCTAAACAGCACATGTGCTGCGGCTCCAAGCAGAGTACCAGCCTGCTGTaGTCAAGGAGGATTAATGTG | + |
|
Preference number: 2 (lower is better) Translates to: AIFRLFLSKQHMCCGSKQSTSLL*SRRINV Trigger: CACATTAATCCTCCTTGACCACAGCAGGCTGGTACT...CTGCTTGGAGCCGCAGCACATGTGCTGTTTAGAAAGAAAGAGCCTGAAGATAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR-3UTR TCA 90 bp | CTTGGAAAAGTAGATGACTGGGGCCACAGAGCTGGCATCTGCATTGATTGGCCACAGCAGTTTTCCTTTTaGATAGGCTCCTTTCATGGA | + |
|
Preference number: 2 (lower is better) Translates to: LGKVDDWGHRAGICIDWPQQFSF*IGSFHG Trigger: TCCATGAAAGGAGCCTATTCAAAAGGAAAACTGCTG...TGGCCAATCAATGCAGATGCCAGCTCTGTGGCCCCAGTCATCTACTTTTCCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR-3UTR GCA 90 bp | GCTATCTTCAGGCTCTTTCTTTCTAAACAGCACATGTGCTGCGGCTCCAAGCAGGGCTACCTACAGTGGTaGTCATATATCCCATATCTG | + |
|
Preference number: 2 (lower is better) Translates to: AIFRLFLSKQHMCCGSKQGYLQW*SYIPYL Trigger: CAGATATGGGATATATGAGCACCACTGTAGGTAGCC...CTGCTTGGAGCCGCAGCACATGTGCTGTTTAGAAAGAAAGAGCCTGAAGATAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR-3UTR GCA 90 bp | GCTATCTTCAGGCTCTTTCTTTCTAAACAGCACATGTGCTGCGGCTCCAAGCAGCTTCCTATCCAAATGTaGAAGCTTAACTGCCCATGC | + |
|
Preference number: 2 (lower is better) Translates to: AIFRLFLSKQHMCCGSKQLPIQM*KLNCPC Trigger: GCATGGGCAGTTAAGCTTGCACATTTGGATAGGAAG...CTGCTTGGAGCCGCAGCACATGTGCTGTTTAGAAAGAAAGAGCCTGAAGATAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR-3UTR CCA 90 bp | TGCCCCAAGCCATCCTGTTCCCTAAAGGCTACCTACAGTGGTGCTCATATATCCCATGGAATCAGCTACTaGGTAGAAACTGTTGCACTT | + |
|
Preference number: 2 (lower is better) Translates to: CPKPSCSLKATYSGAHISHGISY*VETVAL Trigger: AAGTGCAACAGTTTCTACCCAGTAGCTGATTCCATG...GGATATATGAGCACCACTGTAGGTAGCCTTTAGGGAACAGGATGGCTTGGGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR-3UTR CCA 90 bp | GCTATCTTCAGGCTCTTTCTTTCTAAACAGCACATGTGCTGCGGCTCCAAGCAGGGGAACCCTGTAAAATaGTGGGGAATGAATCTGAAC | + |
|
Preference number: 2 (lower is better) Translates to: AIFRLFLSKQHMCCGSKQGNPVK*WGMNLN Trigger: GTTCAGATTCATTCCCCACCATTTTACAGGGTTCCC...CTGCTTGGAGCCGCAGCACATGTGCTGTTTAGAAAGAAAGAGCCTGAAGATAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR-3UTR CCA 90 bp | CTTGGAAAAGTAGATGACTGGGGCCACAGAGCTGGCATCTGCATTGATTGGCCAAATTGTGGGGTATTGTaGAAATTCAGGTGGCCAAGA | + |
|
Preference number: 2 (lower is better) Translates to: LGKVDDWGHRAGICIDWPNCGVL*KFRWPR Trigger: TCTTGGCCACCTGAATTTCCACAATACCCCACAATT...TGGCCAATCAATGCAGATGCCAGCTCTGTGGCCCCAGTCATCTACTTTTCCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR-3UTR TCA 90 bp | CTTGGAAAAGTAGATGACTGGGGCCACAGAGCTGGCATCTGCATTGATTGGCCAAAAACCAACCTTGGATaGCACATGAGCCAAAAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: LGKVDDWGHRAGICIDWPKTNLG*HMSQKK Trigger: TTTCTTTTGGCTCATGTGTCATCCAAGGTTGGTTTT...TGGCCAATCAATGCAGATGCCAGCTCTGTGGCCCCAGTCATCTACTTTTCCAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR-3UTR CCA 90 bp | CTTGGAAAAGTAGATGACTGGGGCCACAGAGCTGGCATCTGCATTGATTGGCCATGTGACATCAATTTATaGCTAAAACTGGGGGCATTG | + |
|
Preference number: 2 (lower is better) Translates to: LGKVDDWGHRAGICIDWPCDINL*LKLGAL Trigger: CAATGCCCCCAGTTTTAGCCATAAATTGATGTCACA...TGGCCAATCAATGCAGATGCCAGCTCTGTGGCCCCAGTCATCTACTTTTCCAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR-3UTR GCA 90 bp | CTTGGAAAAGTAGATGACTGGGGCCACAGAGCTGGCATCTGCATTGATTGGCCATGTTGTCAATACAATTaGCCACTTGAGAAACATAGT | + |
|
Preference number: 2 (lower is better) Translates to: LGKVDDWGHRAGICIDWPCCQYN*PLEKHS Trigger: ACTATGTTTCTCAAGTGGGCAATTGTATTGACAACA...TGGCCAATCAATGCAGATGCCAGCTCTGTGGCCCCAGTCATCTACTTTTCCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR-3UTR GCA 90 bp | GCTCTCTCCTCCATGTTCTCTAACATCAACTGTTTCTGGGTAAGTGTTAGCATCGGCTACCTACAGTGGTaGTCATATATCCCATATCTG | + |
|
Preference number: 2 (lower is better) Translates to: ALSSMFSNINCFWVSVSIGYLQW*SYIPYL Trigger: CAGATATGGGATATATGAGCACCACTGTAGGTAGCC...GATGCTAACACTTACCCAGAAACAGTTGATGTTAGAGAACATGGAGGAGAGAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR-3UTR CCA 90 bp | GCTCTCTCCTCCATGTTCTCTAACATCAACTGTTTCTGGGTAAGTGTTAGCATCTTGTGGAAATTCAGGTaGCCAAGAACTCTTGCCTGT | + |
|
Preference number: 2 (lower is better) Translates to: ALSSMFSNINCFWVSVSILWKFR*PRTLAC Trigger: ACAGGCAAGAGTTCTTGGCCACCTGAATTTCCACAA...GATGCTAACACTTACCCAGAAACAGTTGATGTTAGAGAACATGGAGGAGAGAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR-3UTR GCA 90 bp | GCTATCTTCAGGCTCTTTCTTTCTAAACAGCACATGTGCTGCGGCTCCAAGCAGACTCCTATGGGAGTTTaGATAGTTTTGAATTTGTGT | + |
|
Preference number: 2 (lower is better) Translates to: AIFRLFLSKQHMCCGSKQTPMGV*IVLNLC Trigger: ACACAAATTCAAAACTATGCAAACTCCCATAGGAGT...CTGCTTGGAGCCGCAGCACATGTGCTGTTTAGAAAGAAAGAGCCTGAAGATAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR-3UTR GCA 90 bp | GCTCTCTCCTCCATGTTCTCTAACATCAACTGTTTCTGGGTAAGTGTTAGCATCGAAAATGCCTTTCTATaGAGCGTTTTCAACCAGACC | + |
|
Preference number: 2 (lower is better) Translates to: ALSSMFSNINCFWVSVSIENAFL*SVFNQT Trigger: GGTCTGGTTGAAAACGCTGCATAGAAAGGCATTTTC...GATGCTAACACTTACCCAGAAACAGTTGATGTTAGAGAACATGGAGGAGAGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR-3UTR CCA 90 bp | GCTCTCTCCTCCATGTTCTCTAACATCAACTGTTTCTGGGTAAGTGTTAGCATCCATGGAATCAGCTACTaGGTAGAAACTGTTGCACTT | + |
|
Preference number: 2 (lower is better) Translates to: ALSSMFSNINCFWVSVSIHGISY*VETVAL Trigger: AAGTGCAACAGTTTCTACCCAGTAGCTGATTCCATG...GATGCTAACACTTACCCAGAAACAGTTGATGTTAGAGAACATGGAGGAGAGAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR-3UTR CCA 90 bp | GCTCTCTCCTCCATGTTCTCTAACATCAACTGTTTCTGGGTAAGTGTTAGCATCCTGGCCTTCACTAAATaGTACCTACTTACCCTTTAC | + |
|
Preference number: 2 (lower is better) Translates to: ALSSMFSNINCFWVSVSILAFTK*YLLTLY Trigger: GTAAAGGGTAAGTAGGTACCATTTAGTGAAGGCCAG...GATGCTAACACTTACCCAGAAACAGTTGATGTTAGAGAACATGGAGGAGAGAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR-3UTR CCA 90 bp | GCTCTCTCCTCCATGTTCTCTAACATCAACTGTTTCTGGGTAAGTGTTAGCATCAACCCTGTAAAATGGTaGGGAATGAATCTGAACATG | + |
|
Preference number: 2 (lower is better) Translates to: ALSSMFSNINCFWVSVSINPVKW*GMNLNM Trigger: CATGTTCAGATTCATTCCCCACCATTTTACAGGGTT...GATGCTAACACTTACCCAGAAACAGTTGATGTTAGAGAACATGGAGGAGAGAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR CAA 90 bp | AATCTTAAACCCAGTATCACCCATCCACTGAAGGCACTTTGCCATTaGGAAAAGAAATTCTCATCTCAAAAAGGTCACAGTGGTATAACA | + |
|
Preference number: 2 (lower is better) Translates to: NLKPSITHPLKALCH*EKKFSSQKGHSGIT Trigger: TGTTATACCACTGTGACCTTTTTGAGATGAGAATTTCTTTTCCAAATGGCAAAGTGCCTTCAGTGGATGGGTGATACTGGGTTTAAGATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR GCA 72 bp | TTCCAAGTTCAAGTTCAAGGCTGCCCATGCTATGGCTaGCAGTCATCCCAGGGGTCAAGGCACCAGAACTGC | + |
|
Preference number: 3 (lower is better) Translates to: FQVQVQGCPCYG*QSSQGSRHQNC Trigger: GCAGTTCTGGTGCCTTGACCCCTGGGATGACTGGCAGCCATAGCATGGGCAGCCTTGAACTTGAACTTGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR CCA 72 bp | CATCATAGGCTTTCACTGAGCAGCCTCCCGTGGGTGTaGATCGAGGGGACAGACAAAGCCAGACTAACCATC | + |
|
Preference number: 3 (lower is better) Translates to: HHRLSLSSLPWV*IEGTDKARLTI Trigger: GATGGTTAGTCTGGCTTTGTCTGTCCCCTCGATCCACACCCACGGGAGGCTGCTCAGTGAAAGCCTATGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR-3UTR CAA 90 bp | CTTTCACTGAGCAGCCTCCCGTGGGTGTGGATCGAGGGGACAGACAAAGCCAGAACTAATTGTGGGGTATaGTGGAAATTCAGGTGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: LSLSSLPWVWIEGTDKARTNCGV*WKFRWP Trigger: TGGCCACCTGAATTTCCACAATACCCCACAATTAGT...TCTGGCTTTGTCTGTCCCCTCGATCCACACCCACGGGAGGCTGCTCAGTGAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR GCA 72 bp | AGCTGGCCTAGAGCCCAAACTAAACAAGAAAATGTATaGACACTGCACCCCTTGCTCAGGGAGGGCGTGACA | + |
|
Preference number: 3 (lower is better) Translates to: SWPRAQTKQENV*TLHPLLREGVT Trigger: TGTCACGCCCTCCCTGAGCAAGGGGTGCAGTGTGCATACATTTTCTTGTTTAGTTTGGGCTCTAGGCCAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR-3UTR CAA 90 bp | ACATGTGCTGCGGCTCCAAGCAGCTTTGGTAGAACTAAGAAGCCTCTTGTGCCCAGCTGTCCTTTCCACTaGTGGCAGGTCCAGATGTAT | + |
|
Preference number: 3 (lower is better) Translates to: TCAAAPSSFGRTKKPLVPSCPFH*WQVQMY Trigger: ATACATCTGGACCTGCCACAAGTGGAAAGGACAGCT...GGGCACAAGAGGCTTCTTAGTTCTACCAAAGCTGCTTGGAGCCGCAGCACATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR-3UTR CAA 90 bp | CTTGGAAAAGTAGATGACTGGGGCCACAGAGCTGGCATCTGCATTGATTGGCCAGAGTTTTGCAAAGTCTaGCCCCAAGCCATCCTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: LGKVDDWGHRAGICIDWPEFCKV*PQAILF Trigger: GAACAGGATGGCTTGGGGCAAGACTTTGCAAAACTC...TGGCCAATCAATGCAGATGCCAGCTCTGTGGCCCCAGTCATCTACTTTTCCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR TCA 72 bp | GTAATTCCCTGGATGCACAGACGCAGCTCCTTCTGGTaGCACCTAGGTCTTGAGGGAAGCTCTTATGGCTAT | + |
|
Preference number: 3 (lower is better) Translates to: VIPWMHRRSSFW*HLGLEGSSYGY Trigger: ATAGCCATAAGAGCTTCCCTCAAGACCTAGGTGTCACCAGAAGGAGCTGCGTCTGTGCATCCAGGGAATTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR TCA 72 bp | ACCCAGAGGCTGGAGTCACTTTCTAGACACTGCCCCTaGACACTGCACATTGTAATTCCCTGGATGCACAGA | + |
|
Preference number: 3 (lower is better) Translates to: TQRLESLSRHCP*TLHIVIPWMHR Trigger: TCTGTGCATCCAGGGAATTACAATGTGCAGTGTTCAGGGGCAGTGTCTAGAAAGTGACTCCAGCCTCTGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR TCA 72 bp | TCTTCCCCAGGCTCAGGGAGAATCCATGCCCGCAACTaGAAATGCCTTTCTATGCAGCGTTTTCAACCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: SSPGSGRIHARN*KCLSMQRFQPD Trigger: GTCTGGTTGAAAACGCTGCATAGAAAGGCATTTTCAGTTGCGGGCATGGATTCTCCCTGAGCCTGGGGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR GCA 72 bp | GCTGAAGATCTCTTCCCCAGGCTCAGGGAGAATCCATaGCCGCAACTGAAAATGCCTTTCTATGCAGCGTTT | + |
|
Preference number: 3 (lower is better) Translates to: AEDLFPRLRENP*PQLKMPFYAAF Trigger: AAACGCTGCATAGAAAGGCATTTTCAGTTGCGGGCATGGATTCTCCCTGAGCCTGGGGAAGAGATCTTCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR GCA 72 bp | CTCCAAGCAGCTTTGGTAGAACTAAGAAGCCTCTTGTaGCCAAAGAGCGTGGAGAAGAAGACAGCACCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: LQAALVELRSLL*PKSVEKKTAPQ Trigger: TTGGGGTGCTGTCTTCTTCTCCACGCTCTTTGGGCACAAGAGGCTTCTTAGTTCTACCAAAGCTGCTTGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR-3UTR CAA 90 bp | ACTGAGCAGCCTCCCGTGGGTGTGGATCGAGGGGACAGACAAAGCCAGACTAACCTTGGAAATAATACTTaGCAACCAATTCCAGGCATA | + |
|
Preference number: 3 (lower is better) Translates to: TEQPPVGVDRGDRQSQTNLGNNT*QPIPGI Trigger: TATGCCTGGAATTGGTTGCAAAGTATTATTTCCAAG...GTTAGTCTGGCTTTGTCTGTCCCCTCGATCCACACCCACGGGAGGCTGCTCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR-3UTR CAA 90 bp | CTTGGAAAAGTAGATGACTGGGGCCACAGAGCTGGCATCTGCATTGATTGGCCAGAATTTCAGGGAGTTTaGCAAAGTCTTGCCCCAAGC | + |
|
Preference number: 3 (lower is better) Translates to: LGKVDDWGHRAGICIDWPEFQGV*QSLAPS Trigger: GCTTGGGGCAAGACTTTGCAAAACTCCCTGAAATTC...TGGCCAATCAATGCAGATGCCAGCTCTGTGGCCCCAGTCATCTACTTTTCCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR-3UTR CAA 90 bp | GCTATCTTCAGGCTCTTTCTTTCTAAACAGCACATGTGCTGCGGCTCCAAGCAGAGCTGTCCTTTCCACTaGTGGCAGGTCCAGATGTAT | + |
|
Preference number: 3 (lower is better) Translates to: AIFRLFLSKQHMCCGSKQSCPFH*WQVQMY Trigger: ATACATCTGGACCTGCCACAAGTGGAAAGGACAGCT...CTGCTTGGAGCCGCAGCACATGTGCTGTTTAGAAAGAAAGAGCCTGAAGATAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR TCA 72 bp | GCACAGACGCAGCTCCTTCTGGTGACACCTAGGTCTTaGGGGAAGCTCTTATGGCTATCTTTTGAAGGTTGT | + |
|
Preference number: 3 (lower is better) Translates to: AQTQLLLVTPRS*GKLLWLSFEGC Trigger: ACAACCTTCAAAAGATAGCCATAAGAGCTTCCCTCAAGACCTAGGTGTCACCAGAAGGAGCTGCGTCTGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR TCA 72 bp | TTACCCTTTACTTTGGGGCAGGGCATGAAAGGGCAATaGGGAGGTGTTAGCTATTGGTGGGCATGCTTATGG | + |
|
Preference number: 3 (lower is better) Translates to: LPFTLGQGMKGQ*GGVSYWWACLW Trigger: CCATAAGCATGCCCACCAATAGCTAACACCTCCTCATTGCCCTTTCATGCCCTGCCCCAAAGTAAAGGGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR-3UTR CAA 90 bp | CTTGGAAAAGTAGATGACTGGGGCCACAGAGCTGGCATCTGCATTGATTGGCCAGCAGCAGTTTTCCTTTaGAATAGGCTCCTTTCATGG | + |
|
Preference number: 3 (lower is better) Translates to: LGKVDDWGHRAGICIDWPAAVFL*NRLLSW Trigger: CCATGAAAGGAGCCTATTCAAAAGGAAAACTGCTGC...TGGCCAATCAATGCAGATGCCAGCTCTGTGGCCCCAGTCATCTACTTTTCCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR-3UTR CAA 90 bp | ACATGTGCTGCGGCTCCAAGCAGCTTTGGTAGAACTAAGAAGCCTCTTGTGCCCCACAGTAATAGAACATaGAAGTCAGAGCTTCTCCAC | + |
|
Preference number: 3 (lower is better) Translates to: TCAAAPSSFGRTKKPLVPHSNRT*KSELLH Trigger: GTGGAGAAGCTCTGACTTCAATGTTCTATTACTGTG...GGGCACAAGAGGCTTCTTAGTTCTACCAAAGCTGCTTGGAGCCGCAGCACATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR CCA 72 bp | CCCCAAGCCATCCTGTTCCCTAAAGGCTACCTACAGTaGTGCTCATATATCCCATATCTGACAGCAAATAGC | + |
|
Preference number: 3 (lower is better) Translates to: PQAILFPKGYLQ*CSYIPYLTANS Trigger: GCTATTTGCTGTCAGATATGGGATATATGAGCACCACTGTAGGTAGCCTTTAGGGAACAGGATGGCTTGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR-3UTR CAA 90 bp | GCTATCTTCAGGCTCTTTCTTTCTAAACAGCACATGTGCTGCGGCTCCAAGCAGACTAATTGTGGGGTATaGTGGAAATTCAGGTGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: AIFRLFLSKQHMCCGSKQTNCGV*WKFRWP Trigger: TGGCCACCTGAATTTCCACAATACCCCACAATTAGT...CTGCTTGGAGCCGCAGCACATGTGCTGTTTAGAAAGAAAGAGCCTGAAGATAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR-3UTR CAA 90 bp | GCTATCTTCAGGCTCTTTCTTTCTAAACAGCACATGTGCTGCGGCTCCAAGCAGCACAGTAATAGAACATaGAAGTCAGAGCTTCTCCAC | + |
|
Preference number: 3 (lower is better) Translates to: AIFRLFLSKQHMCCGSKQHSNRT*KSELLH Trigger: GTGGAGAAGCTCTGACTTCAATGTTCTATTACTGTG...CTGCTTGGAGCCGCAGCACATGTGCTGTTTAGAAAGAAAGAGCCTGAAGATAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR TCA 72 bp | CGTTTTCAACCAGACCTTTGTGTCCCATTTAGCATTTaGGTGAGTACCAGCCTGCTGTGGTCAAGGAGGATT | + |
|
Preference number: 3 (lower is better) Translates to: RFQPDLCVPFSI*VSTSLLWSRRI Trigger: AATCCTCCTTGACCACAGCAGGCTGGTACTCACTCAAATGCTAAATGGGACACAAAGGTCTGGTTGAAAACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR GCA 72 bp | CAAGCCATCCTGTTCCCTAAAGGCTACCTACAGTGGTaGTCATATATCCCATATCTGACAGCAAATAGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: QAILFPKGYLQW*SYIPYLTANSP Trigger: TGGGCTATTTGCTGTCAGATATGGGATATATGAGCACCACTGTAGGTAGCCTTTAGGGAACAGGATGGCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR GCA 72 bp | AATGTCAGTGGAATTTCAGGGAGTTTTGCAAAGTCTTaGCCCAAGCCATCCTGTTCCCTAAAGGCTACCTAC | + |
|
Preference number: 3 (lower is better) Translates to: NVSGISGSFAKS*PKPSCSLKATY Trigger: GTAGGTAGCCTTTAGGGAACAGGATGGCTTGGGGCAAGACTTTGCAAAACTCCCTGAAATTCCACTGACATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR-3UTR CAA 90 bp | AGAAGCCAAAAAGGCAGAGAAACATCTTCCCCTCTGAACACTAAGTGGGATGTGGCAGCAGTTTTCCTTTaGAATAGGCTCCTTTCATGG | + |
|
Preference number: 3 (lower is better) Translates to: RSQKGRETSSPLNTKWDVAAVFL*NRLLSW Trigger: CCATGAAAGGAGCCTATTCAAAAGGAAAACTGCTGC...CACATCCCACTTAGTGTTCAGAGGGGAAGATGTTTCTCTGCCTTTTTGGCTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR-3UTR CAA 90 bp | TGCCCCAAGCCATCCTGTTCCCTAAAGGCTACCTACAGTGGTGCTCATATATCCCTTGGAAATAATACTTaGCAACCAATTCCAGGCATA | + |
|
Preference number: 3 (lower is better) Translates to: CPKPSCSLKATYSGAHISLGNNT*QPIPGI Trigger: TATGCCTGGAATTGGTTGCAAAGTATTATTTCCAAG...GGATATATGAGCACCACTGTAGGTAGCCTTTAGGGAACAGGATGGCTTGGGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR TCA 72 bp | ACATGGAATCAGCTACTGGGTAGAAACTGTTGCACTTaGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAT | + |
|
Preference number: 3 (lower is better) Translates to: TWNQLLGRNCCT*ERERERERERD Trigger: ATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAAGTGCAACAGTTTCTACCCAGTAGCTGATTCCATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR CCA 72 bp | ACATTAGATCAGAGCAAGGGGAACCCTGTAAAATGGTaGGGAATGAATCTGAACATGGAATCAGCTACTGGG | + |
|
Preference number: 3 (lower is better) Translates to: TLDQSKGNPVKW*GMNLNMESATG Trigger: CCCAGTAGCTGATTCCATGTTCAGATTCATTCCCCACCATTTTACAGGGTTCCCCTTGCTCTGATCTAATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR TCA 72 bp | AGTTCAGAATGCATGGAAGGTACCACATGTGATGGCTaGTCTTGCCTTAGAAAGAAGCCTTATGTTCCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: SSECMEGTTCDG*SCLRKKPYVPA Trigger: TGCTGGAACATAAGGCTTCTTTCTAAGGCAAGATCAGCCATCACATGTGGTACCTTCCATGCATTCTGAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR TCA 72 bp | TTAGTGTGTACACGTTCCTGGGGTCCATTCCCAGCATaGAAAGAAAGAAGGAAGGAAGGAAAGAAGAAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: LVCTRSWGPFPA*KERRKEGKKKG Trigger: TCCTTTCTTCTTTCCTTCCTTCCTTCTTTCTTTTCATGCTGGGAATGGACCCCAGGAACGTGTACACACTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR GCA 72 bp | ATTCTCATCTCAAAAAGGTCACAGTGGTATAACATGTaGTTAGTGTGTACACGTTCCTGGGGTCCATTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: ILISKRSQWYNM*LVCTRSWGPFP Trigger: TGGGAATGGACCCCAGGAACGTGTACACACTAAGCACATGTTATACCACTGTGACCTTTTTGAGATGAGAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR CCA 72 bp | ACTAAAGCAATCACACCCACTAATTGTGGGGTATTGTaGAAATTCAGGTGGCCAAGAACTCTTGCCTGTATG | + |
|
Preference number: 3 (lower is better) Translates to: TKAITPTNCGVL*KFRWPRTLACM Trigger: CATACAGGCAAGAGTTCTTGGCCACCTGAATTTCCACAATACCCCACAATTAGTGGGTGTGATTGCTTTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR CCA 72 bp | GCTCTCTCCTCCATGTTCTCTAACATCAACTGTTTCTaGGTAAGTGTTAGCATCTTCCAAAGACAAGGACAA | + |
|
Preference number: 3 (lower is better) Translates to: ALSSMFSNINCF*VSVSIFQRQGQ Trigger: TTGTCCTTGTCTTTGGAAGATGCTAACACTTACCCAGAAACAGTTGATGTTAGAGAACATGGAGGAGAGAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR TCA 72 bp | CTTTCCACTTGTGGCAGGTCCAGATGTATAGCAATGTaGGTTAGAATAAAAGGTGCATGTCTTGCTGAAGAT | + |
|
Preference number: 3 (lower is better) Translates to: LSTCGRSRCIAM*VRIKGACLAED Trigger: ATCTTCAGCAAGACATGCACCTTTTATTCTAACTCACATTGCTATACATCTGGACCTGCCACAAGTGGAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR TCA 72 bp | AACAAGCAGAGTTTTACACATAGCACAACAGTGAAATaGTACTGGCCTTCACTAAATGGTACCTACTTACCC | + |
|
Preference number: 3 (lower is better) Translates to: NKQSFTHSTTVK*YWPSLNGTYLP Trigger: GGGTAAGTAGGTACCATTTAGTGAAGGCCAGTATCATTTCACTGTTGTGCTATGTGTAAAACTCTGCTTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR CCA 72 bp | TTTGGAAAAGAAATTCTCATCTCAAAAAGGTCACAGTaGTATAACATGTGCTTAGTGTGTACACGTTCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: FGKEILISKRSQ*YNMCLVCTRSW Trigger: CCAGGAACGTGTACACACTAAGCACATGTTATACCACTGTGACCTTTTTGAGATGAGAATTTCTTTTCCAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR TCA 72 bp | CTTCTCCACACACGGGTTAGGTATCTGTTGTTCTTTTaGATGTGCTTAAGCCTTCAATATATAAAGATCATT | + |
|
Preference number: 3 (lower is better) Translates to: LLHTRVRYLLFF*MCLSLQYIKII Trigger: AATGATCTTTATATATTGAAGGCTTAAGCACATTCAAAAGAACAACAGATACCTAACCCGTGTGTGGAGAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS-3UTR GCA 90 bp | ACTGAGCAGCCTCCCGTGGGTGTGGATCGAGGGGACAGACAAAGCCAGACTAACGAGGAAGCACTCCTCTaGCACCCTGCGCTTACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TEQPPVGVDRGDRQSQTNEEALL*HPALTA Trigger: AGCAGTAAGCGCAGGGTGGCAGAGGAGTGCTTCCTC...GTTAGTCTGGCTTTGTCTGTCCCCTCGATCCACACCCACGGGAGGCTGCTCAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238977.3 |
||
| CDS-3UTR CCA 90 bp | ACTGAGCAGCCTCCCGTGGGTGTGGATCGAGGGGACAGACAAAGCCAGACTAACTCTGTGCACTCAGCCTaGAGTGGAGCTTGTGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TEQPPVGVDRGDRQSQTNSVHSA*SGACGL Trigger: CAGACCACAAGCTCCACTCCAGGCTGAGTGCACAGA...GTTAGTCTGGCTTTGTCTGTCCCCTCGATCCACACCCACGGGAGGCTGCTCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS-3UTR TCA 90 bp | ACTGAGCAGCCTCCCGTGGGTGTGGATCGAGGGGACAGACAAAGCCAGACTAACTGCTGTGGCACGAGCTaGTTTCTTCCAGCCTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TEQPPVGVDRGDRQSQTNCCGTS*FLPASS Trigger: TGAAGAGGCTGGAAGAAATCAGCTCGTGCCACAGCA...GTTAGTCTGGCTTTGTCTGTCCCCTCGATCCACACCCACGGGAGGCTGCTCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS-3UTR TCA 90 bp | ACTGAGCAGCCTCCCGTGGGTGTGGATCGAGGGGACAGACAAAGCCAGACTAACGTCATCTGTGAGGGCTaGTGTCCTTCCTCCTTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: TEQPPVGVDRGDRQSQTNVICEG*CPSSFD Trigger: GTCAAAGGAGGAAGGACATCAGCCCTCACAGATGAC...GTTAGTCTGGCTTTGTCTGTCCCCTCGATCCACACCCACGGGAGGCTGCTCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057428.13 |
||
| CDS-3UTR TCA 90 bp | ACTGAGCAGCCTCCCGTGGGTGTGGATCGAGGGGACAGACAAAGCCAGACTAACGGTCAGTTTTCTCTGTaGGGGCTGATGTCCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TEQPPVGVDRGDRQSQTNGQFSL*GLMSFL Trigger: GAGGAAGGACATCAGCCCTCACAGAGAAAACTGACC...GTTAGTCTGGCTTTGTCTGTCCCCTCGATCCACACCCACGGGAGGCTGCTCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000238977.3 |
||
| CDS-3UTR CCA 90 bp | ACTGAGCAGCCTCCCGTGGGTGTGGATCGAGGGGACAGACAAAGCCAGACTAACTTCACGTGGTCCAGCTaGTTCATGACGCTGATCTCG | + |
|
Preference number: 4 (lower is better) Translates to: TEQPPVGVDRGDRQSQTNFTWSS*FMTLIS Trigger: CGAGATCAGCGTCATGAACCAGCTGGACCACGTGAA...GTTAGTCTGGCTTTGTCTGTCCCCTCGATCCACACCCACGGGAGGCTGCTCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS-3UTR TCA 90 bp | ACTGAGCAGCCTCCCGTGGGTGTGGATCGAGGGGACAGACAAAGCCAGACTAACCACAGATCTGCTTCATaGACAGGATGGTGTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TEQPPVGVDRGDRQSQTNHRSAS*TGWCPA Trigger: AGCTGGACACCATCCTGTTCATGAAGCAGATCTGTG...GTTAGTCTGGCTTTGTCTGTCCCCTCGATCCACACCCACGGGAGGCTGCTCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS-3UTR TCA 90 bp | CTTTCACTGAGCAGCCTCCCGTGGGTGTGGATCGAGGGGACAGACAAAGCCAGAGGATGTTCTCAGGCTTaGGATCCAAGTGGAGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: LSLSSLPWVWIEGTDKARGCSQA*DPSGGC Trigger: ACATCCTCCACTTGGATCTCAAGCCTGAGAACATCC...TCTGGCTTTGTCTGTCCCCTCGATCCACACCCACGGGAGGCTGCTCAGTGAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS-3UTR TCA 90 bp | ACTGAGCAGCCTCCCGTGGGTGTGGATCGAGGGGACAGACAAAGCCAGACTAACTTTCTCTGTGAGGGCTaGTGTCCTTCCTCCTTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: TEQPPVGVDRGDRQSQTNFLCEG*CPSSFD Trigger: GTCAAAGGAGGAAGGACATCAGCCCTCACAGAGAAA...GTTAGTCTGGCTTTGTCTGTCCCCTCGATCCACACCCACGGGAGGCTGCTCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238977.3 |
||
| CDS-3UTR GCA 90 bp | ACTGAGCAGCCTCCCGTGGGTGTGGATCGAGGGGACAGACAAAGCCAGACTAACGGAGATGAACTCCTTTaGCTCCTCCGAGATATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TEQPPVGVDRGDRQSQTNGDELL*LLRDIL Trigger: CAGGATATCTCGGAGGAGGCAAAGGAGTTCATCTCC...GTTAGTCTGGCTTTGTCTGTCCCCTCGATCCACACCCACGGGAGGCTGCTCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS-3UTR CCA 90 bp | GCTATGGCTGCCAGTCATCCCAGGGGTCAAGGCACCAGAACTGCTGATTTTTCCGGCACGCCAGGATGTTaGTCAGTGTCTCGGCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: AMAASHPRGQGTRTADFSGTPGC*SVSRHH Trigger: ATGATGCCGAGACACTGACCAACATCCTGGCGTGCC...GGAAAAATCAGCAGTTCTGGTGCCTTGACCCCTGGGATGACTGGCAGCCATAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS-3UTR CCA 90 bp | GCTATGGCTGCCAGTCATCCCAGGGGTCAAGGCACCAGAACTGCTGATTTTTCCCTGGAGTGGAGCTTGTaGTCTGACAACCATGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: AMAASHPRGQGTRTADFSLEWSL*SDNHGC Trigger: GCACCCATGGTTGTCAGACCACAAGCTCCACTCCAG...GGAAAAATCAGCAGTTCTGGTGCCTTGACCCCTGGGATGACTGGCAGCCATAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS-3UTR CCA 90 bp | GCTATGGCTGCCAGTCATCCCAGGGGTCAAGGCACCAGAACTGCTGATTTTTCCCATCCGATGATCAAATaGAGCGGCAGGAGCAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: AMAASHPRGQGTRTADFSHPMIK*SGRSRD Trigger: ATCCCTGCTCCTGCCGCTCCATTTGATCATCGGATG...GGAAAAATCAGCAGTTCTGGTGCCTTGACCCCTGGGATGACTGGCAGCCATAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR CAA 72 bp | GGCCACAGAGCTGGCATCTGCATTGATTGGCCAGCTTaGCAAAGCCCCTTTCCCATCAGAGCCGACATCATA | + |
|
Preference number: 4 (lower is better) Translates to: GHRAGICIDWPA*QSPFPIRADII Trigger: TATGATGTCGGCTCTGATGGGAAAGGGGCTTTGCAAAGCTGGCCAATCAATGCAGATGCCAGCTCTGTGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR CAA 72 bp | CGGCTCCAAGCAGCTTTGGTAGAACTAAGAAGCCTCTaGTGCCCAAAGAGCGTGGAGAAGAAGACAGCACCC | + |
|
Preference number: 4 (lower is better) Translates to: RLQAALVELRSL*CPKSVEKKTAP Trigger: GGGTGCTGTCTTCTTCTCCACGCTCTTTGGGCACAAGAGGCTTCTTAGTTCTACCAAAGCTGCTTGGAGCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS-3UTR TCA 90 bp | GCTATGGCTGCCAGTCATCCCAGGGGTCAAGGCACCAGAACTGCTGATTTTTCCCATCATAGAGCTGAATaGGGTTCACGTGGTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: AMAASHPRGQGTRTADFSHHRAE*GSRGPA Trigger: AGCTGGACCACGTGAACCTCATTCAGCTCTATGATG...GGAAAAATCAGCAGTTCTGGTGCCTTGACCCCTGGGATGACTGGCAGCCATAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS-3UTR TCA 90 bp | TGCCCCAAGCCATCCTGTTCCCTAAAGGCTACCTACAGTGGTGCTCATATATCCTCAGGAGCTTGGAGATaGACTCCTTTGCCTCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: CPKPSCSLKATYSGAHISSGAWR*TPLPPP Trigger: CGGAGGAGGCAAAGGAGTTCATCTCCAAGCTCCTGA...GGATATATGAGCACCACTGTAGGTAGCCTTTAGGGAACAGGATGGCTTGGGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS-3UTR GCA 90 bp | ACTGAGCAGCCTCCCGTGGGTGTGGATCGAGGGGACAGACAAAGCCAGACTAACCAGCTTCAGGCCTGTTaGTTTCTCTTCACACTTATG | + |
|
Preference number: 4 (lower is better) Translates to: TEQPPVGVDRGDRQSQTNQLQAC*FLFTLM Trigger: CATAAGTGTGAAGAGAAAGCAACAGGCCTGAAGCTG...GTTAGTCTGGCTTTGTCTGTCCCCTCGATCCACACCCACGGGAGGCTGCTCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS-3UTR GCA 90 bp | ACATGTGCTGCGGCTCCAAGCAGCTTTGGTAGAACTAAGAAGCCTCTTGTGCCCTCTGACAACCATGGGTaGTTGAGAGCTTCGCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TCAAAPSSFGRTKKPLVPSDNHG*LRASLA Trigger: TGCCAGCGAAGCTCTCAAGCACCCATGGTTGTCAGA...GGGCACAAGAGGCTTCTTAGTTCTACCAAAGCTGCTTGGAGCCGCAGCACATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS-3UTR GCA 90 bp | CTTTCACTGAGCAGCCTCCCGTGGGTGTGGATCGAGGGGACAGACAAAGCCAGATCAGAACACCAGAGTTaGAGTTCTTCTGTGCACTCA | + |
|
Preference number: 4 (lower is better) Translates to: LSLSSLPWVWIEGTDKARSEHQS*SSSVHS Trigger: TGAGTGCACAGAAGAACTGCAACTCTGGTGTTCTGA...TCTGGCTTTGTCTGTCCCCTCGATCCACACCCACGGGAGGCTGCTCAGTGAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS-3UTR GCA 90 bp | TGCCCCAAGCCATCCTGTTCCCTAAAGGCTACCTACAGTGGTGCTCATATATCCCCCAGGCTTCTGGCTTaGCTGGTTTCCTCTGTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: CPKPSCSLKATYSGAHISPRLLA*LVSSVL Trigger: TAGGACAGAGGAAACCAGGCAAGCCAGAAGCCTGGG...GGATATATGAGCACCACTGTAGGTAGCCTTTAGGGAACAGGATGGCTTGGGGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238977.3 |
||
| CDS-3UTR CCA 90 bp | CTTGGAAAAGTAGATGACTGGGGCCACAGAGCTGGCATCTGCATTGATTGGCCATCTGTGCACTCAGCCTaGAGTGGAGCTTGTGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LGKVDDWGHRAGICIDWPSVHSA*SGACGL Trigger: CAGACCACAAGCTCCACTCCAGGCTGAGTGCACAGA...TGGCCAATCAATGCAGATGCCAGCTCTGTGGCCCCAGTCATCTACTTTTCCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS-3UTR CCA 90 bp | ACTGAGCAGCCTCCCGTGGGTGTGGATCGAGGGGACAGACAAAGCCAGACTAACCAGACTTTCTATGCATaGAGCATCTTTTGCACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TEQPPVGVDRGDRQSQTNQTFYA*SIFCTC Trigger: GCAGGTGCAAAAGATGCTCCATGCATAGAAAGTCTG...GTTAGTCTGGCTTTGTCTGTCCCCTCGATCCACACCCACGGGAGGCTGCTCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238977.3 |
||
| CDS-3UTR CCA 90 bp | CTTGGAAAAGTAGATGACTGGGGCCACAGAGCTGGCATCTGCATTGATTGGCCAAGGGATGTCATCCAGTaGGACCTCCAGGTCTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LGKVDDWGHRAGICIDWPRDVIQ*DLQVLL Trigger: GAGCAAGACCTGGAGGTCCCACTGGATGACATCCCT...TGGCCAATCAATGCAGATGCCAGCTCTGTGGCCCCAGTCATCTACTTTTCCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238977.3 |
||
| 3UTR CAA 72 bp | TTAGCTATTGGTGGGCATGCTTATGGACATGAGGGTTaGGCAGTTAGTCAAGGGTCTCAAGTCAGCCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LAIGGHAYGHEG*AVSQGSQVSPG Trigger: CCCGGGGCTGACTTGAGACCCTTGACTAACTGCCAAACCCTCATGTCCATAAGCATGCCCACCAATAGCTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS-3UTR TCA 90 bp | GCTATCTTCAGGCTCTTTCTTTCTAAACAGCACATGTGCTGCGGCTCCAAGCAGGTGGAGCTTGTGGTCTaGCAACCATGGGTGCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: AIFRLFLSKQHMCCGSKQVELVV*QPWVLE Trigger: CTCAAGCACCCATGGTTGTCAGACCACAAGCTCCAC...CTGCTTGGAGCCGCAGCACATGTGCTGTTTAGAAAGAAAGAGCCTGAAGATAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS-3UTR TCA 90 bp | ACATGTGCTGCGGCTCCAAGCAGCTTTGGTAGAACTAAGAAGCCTCTTGTGCCCTTTTGTTGTCCTCACTaGGGAAGCACTCCTCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TCAAAPSSFGRTKKPLVPFCCPH*GSTPLP Trigger: TGGCAGAGGAGTGCTTCCTCAGTGAGGACAACAAAA...GGGCACAAGAGGCTTCTTAGTTCTACCAAAGCTGCTTGGAGCCGCAGCACATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238977.3 |
||
| CDS-3UTR GCA 90 bp | CTTTCACTGAGCAGCCTCCCGTGGGTGTGGATCGAGGGGACAGACAAAGCCAGAACAAGGATGATGTCATaGTTGGACTCAAAGGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: LSLSSLPWVWIEGTDKARTRMMS*LDSKAS Trigger: TGATGCCTTTGAGTCCAAGCATGACATCATCCTTGT...TCTGGCTTTGTCTGTCCCCTCGATCCACACCCACGGGAGGCTGCTCAGTGAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS-3UTR GCA 90 bp | TGCCCCAAGCCATCCTGTTCCCTAAAGGCTACCTACAGTGGTGCTCATATATCCGTTGCAGTTCTTCTGTaGACTCAGCCTGGAGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: CPKPSCSLKATYSGAHISVAVLL*TQPGVE Trigger: CTCCACTCCAGGCTGAGTGCACAGAAGAACTGCAAC...GGATATATGAGCACCACTGTAGGTAGCCTTTAGGGAACAGGATGGCTTGGGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS-3UTR CCA 90 bp | CTTGGAAAAGTAGATGACTGGGGCCACAGAGCTGGCATCTGCATTGATTGGCCACATCCGATGATCAAATaGAGCGGCAGGAGCAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LGKVDDWGHRAGICIDWPHPMIK*SGRSRD Trigger: ATCCCTGCTCCTGCCGCTCCATTTGATCATCGGATG...TGGCCAATCAATGCAGATGCCAGCTCTGTGGCCCCAGTCATCTACTTTTCCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS-3UTR CCA 90 bp | TGCCCCAAGCCATCCTGTTCCCTAAAGGCTACCTACAGTGGTGCTCATATATCCTATCACCCAGGCTTCTaGCTTGCCTGGTTTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: CPKPSCSLKATYSGAHISYHPGF*LAWFPL Trigger: CAGAGGAAACCAGGCAAGCCAGAAGCCTGGGTGATA...GGATATATGAGCACCACTGTAGGTAGCCTTTAGGGAACAGGATGGCTTGGGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238977.3 |
||
| CDS-3UTR TCA 90 bp | GCTATGGCTGCCAGTCATCCCAGGGGTCAAGGCACCAGAACTGCTGATTTTTCCGTACAGATTGTCCACTaGAGCATGTTTGGCCATTAC | + |
|
Preference number: 4 (lower is better) Translates to: AMAASHPRGQGTRTADFSVQIVH*SMFGHY Trigger: GTAATGGCCAAACATGCTTCAGTGGACAATCTGTAC...GGAAAAATCAGCAGTTCTGGTGCCTTGACCCCTGGGATGACTGGCAGCCATAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS-3UTR TCA 90 bp | ACTGAGCAGCCTCCCGTGGGTGTGGATCGAGGGGACAGACAAAGCCAGACTAACTCCTCCGAGATATCCTaGAATTCCTCATCTTCTAAA | + |
|
Preference number: 4 (lower is better) Translates to: TEQPPVGVDRGDRQSQTNSSEIS*NSSSSK Trigger: TTTAGAAGATGAGGAATTTCAGGATATCTCGGAGGA...GTTAGTCTGGCTTTGTCTGTCCCCTCGATCCACACCCACGGGAGGCTGCTCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS-3UTR TCA 90 bp | GCTATCTTCAGGCTCTTTCTTTCTAAACAGCACATGTGCTGCGGCTCCAAGCAGTCCACTTGCAGCTGCTaGAGCTCTGTTCTCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: AIFRLFLSKQHMCCGSKQSTCSC*SSVLSF Trigger: GAAGCTGAGAACAGAGCTTCAGCAGCTGCAAGTGGA...CTGCTTGGAGCCGCAGCACATGTGCTGTTTAGAAAGAAAGAGCCTGAAGATAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238977.3 |
||
| CDS-3UTR TCA 90 bp | GCTATCTTCAGGCTCTTTCTTTCTAAACAGCACATGTGCTGCGGCTCCAAGCAGGGATGTTCTCAGGCTTaGGATCCAAGTGGAGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: AIFRLFLSKQHMCCGSKQGCSQA*DPSGGC Trigger: ACATCCTCCACTTGGATCTCAAGCCTGAGAACATCC...CTGCTTGGAGCCGCAGCACATGTGCTGTTTAGAAAGAAAGAGCCTGAAGATAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS-3UTR TCA 90 bp | ACTGAGCAGCCTCCCGTGGGTGTGGATCGAGGGGACAGACAAAGCCAGACTAACTCTGTGGAATTCCTCTaGACAAATTCTATCTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TEQPPVGVDRGDRQSQTNSVEFL*TNSILS Trigger: AGACAAGATAGAATTTGTTCAGAGGAATTCCACAGA...GTTAGTCTGGCTTTGTCTGTCCCCTCGATCCACACCCACGGGAGGCTGCTCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238977.3 |
||
| CDS-3UTR GCA 90 bp | TGCCCCAAGCCATCCTGTTCCCTAAAGGCTACCTACAGTGGTGCTCATATATCCAGGATGTACATCTGGTaGATGTACCGTATCCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: CPKPSCSLKATYSGAHISRMYIW*MYRIPS Trigger: TGAGGGGATACGGTACATGCACCAGATGTACATCCT...GGATATATGAGCACCACTGTAGGTAGCCTTTAGGGAACAGGATGGCTTGGGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS-3UTR GCA 90 bp | TGCCCCAAGCCATCCTGTTCCCTAAAGGCTACCTACAGTGGTGCTCATATATCCGGACACAATCATGACTaGTCAGCACTCCCTTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: CPKPSCSLKATYSGAHISGHNHD*SALPSL Trigger: AAGAGAAGGGAGTGCTGAGCAGTCATGATTGTGTCC...GGATATATGAGCACCACTGTAGGTAGCCTTTAGGGAACAGGATGGCTTGGGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238977.3 |
||
| CDS-3UTR CCA 90 bp | ACTGAGCAGCCTCCCGTGGGTGTGGATCGAGGGGACAGACAAAGCCAGACTAACGCACTTCTAATGCACTaGTCTTCTCTGAATTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TEQPPVGVDRGDRQSQTNALLMH*SSLNFS Trigger: AGAAAAATTCAGAGAAGACCAGTGCATTAGAAGTGC...GTTAGTCTGGCTTTGTCTGTCCCCTCGATCCACACCCACGGGAGGCTGCTCAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238977.3 |
||
| CDS-3UTR CCA 90 bp | GCTATCTTCAGGCTCTTTCTTTCTAAACAGCACATGTGCTGCGGCTCCAAGCAGGTGGTCATTCCATCCTaGAGTCTATCACCCAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: AIFRLFLSKQHMCCGSKQVVIPS*SLSPRL Trigger: AAGCCTGGGTGATAGACTCCAGGATGGAATGACCAC...CTGCTTGGAGCCGCAGCACATGTGCTGTTTAGAAAGAAAGAGCCTGAAGATAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238977.3 |
||
| CDS-3UTR CCA 90 bp | GCTCTCTCCTCCATGTTCTCTAACATCAACTGTTTCTGGGTAAGTGTTAGCATCGGCTGCTGTCAGGAGTaGGGCTTTCATCTCCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ALSSMFSNINCFWVSVSIGCCQE*GFHLPL Trigger: CAGAGGGAGATGAAAGCCCCACTCCTGACAGCAGCC...GATGCTAACACTTACCCAGAAACAGTTGATGTTAGAGAACATGGAGGAGAGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238977.3 |
||
| CDS-3UTR TCA 90 bp | CCACATGTGATGGCTGATCTTGCCTTAGAAAGAAGCCTTATGTTCCAGCAAGCTTGCTGTGGCACGAGCTaGTTTCTTCCAGCCTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PHVMADLALERSLMFQQACCGTS*FLPASS Trigger: TGAAGAGGCTGGAAGAAATCAGCTCGTGCCACAGCA...AGCTTGCTGGAACATAAGGCTTCTTTCTAAGGCAAGATCAGCCATCACATGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS-3UTR TCA 90 bp | GCTATGGCTGCCAGTCATCCCAGGGGTCAAGGCACCAGAACTGCTGATTTTTCCTCCTCCGAGATATCCTaGAATTCCTCATCTTCTAAA | + |
|
Preference number: 4 (lower is better) Translates to: AMAASHPRGQGTRTADFSSSEIS*NSSSSK Trigger: TTTAGAAGATGAGGAATTTCAGGATATCTCGGAGGA...GGAAAAATCAGCAGTTCTGGTGCCTTGACCCCTGGGATGACTGGCAGCCATAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS-3UTR TCA 90 bp | GCTCTCTCCTCCATGTTCTCTAACATCAACTGTTTCTGGGTAAGTGTTAGCATCTCAGGAGCTTGGAGATaGACTCCTTTGCCTCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: ALSSMFSNINCFWVSVSISGAWR*TPLPPP Trigger: CGGAGGAGGCAAAGGAGTTCATCTCCAAGCTCCTGA...GATGCTAACACTTACCCAGAAACAGTTGATGTTAGAGAACATGGAGGAGAGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS-3UTR TCA 90 bp | GCTCTCTCCTCCATGTTCTCTAACATCAACTGTTTCTGGGTAAGTGTTAGCATCGTGGAGCTTGTGGTCTaGCAACCATGGGTGCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: ALSSMFSNINCFWVSVSIVELVV*QPWVLE Trigger: CTCAAGCACCCATGGTTGTCAGACCACAAGCTCCAC...GATGCTAACACTTACCCAGAAACAGTTGATGTTAGAGAACATGGAGGAGAGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS-3UTR GCA 90 bp | TGCCCCAAGCCATCCTGTTCCCTAAAGGCTACCTACAGTGGTGCTCATATATCCCAGCTTCAGGCCTGTTaGTTTCTCTTCACACTTATG | + |
|
Preference number: 4 (lower is better) Translates to: CPKPSCSLKATYSGAHISQLQAC*FLFTLM Trigger: CATAAGTGTGAAGAGAAAGCAACAGGCCTGAAGCTG...GGATATATGAGCACCACTGTAGGTAGCCTTTAGGGAACAGGATGGCTTGGGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS-3UTR GCA 90 bp | CCACATGTGATGGCTGATCTTGCCTTAGAAAGAAGCCTTATGTTCCAGCAAGCTTCTGACAACCATGGGTaGTTGAGAGCTTCGCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PHVMADLALERSLMFQQASDNHG*LRASLA Trigger: TGCCAGCGAAGCTCTCAAGCACCCATGGTTGTCAGA...AGCTTGCTGGAACATAAGGCTTCTTTCTAAGGCAAGATCAGCCATCACATGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS-3UTR CCA 90 bp | GCTCTCTCCTCCATGTTCTCTAACATCAACTGTTTCTGGGTAAGTGTTAGCATCCTGGAGTGGAGCTTGTaGTCTGACAACCATGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: ALSSMFSNINCFWVSVSILEWSL*SDNHGC Trigger: GCACCCATGGTTGTCAGACCACAAGCTCCACTCCAG...GATGCTAACACTTACCCAGAAACAGTTGATGTTAGAGAACATGGAGGAGAGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS-3UTR TCA 90 bp | AGAAGCCAAAAAGGCAGAGAAACATCTTCCCCTCTGAACACTAAGTGGGATGTGCATCATAGAGCTGAATaGGGTTCACGTGGTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RSQKGRETSSPLNTKWDVHHRAE*GSRGPA Trigger: AGCTGGACCACGTGAACCTCATTCAGCTCTATGATG...CACATCCCACTTAGTGTTCAGAGGGGAAGATGTTTCTCTGCCTTTTTGGCTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS-3UTR TCA 90 bp | AGAAGCCAAAAAGGCAGAGAAACATCTTCCCCTCTGAACACTAAGTGGGATGTGCACAGATCTGCTTCATaGACAGGATGGTGTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RSQKGRETSSPLNTKWDVHRSAS*TGWCPA Trigger: AGCTGGACACCATCCTGTTCATGAAGCAGATCTGTG...CACATCCCACTTAGTGTTCAGAGGGGAAGATGTTTCTCTGCCTTTTTGGCTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS-3UTR GCA 90 bp | GCTCTCTCCTCCATGTTCTCTAACATCAACTGTTTCTGGGTAAGTGTTAGCATCGTTGCAGTTCTTCTGTaGACTCAGCCTGGAGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ALSSMFSNINCFWVSVSIVAVLL*TQPGVE Trigger: CTCCACTCCAGGCTGAGTGCACAGAAGAACTGCAAC...GATGCTAACACTTACCCAGAAACAGTTGATGTTAGAGAACATGGAGGAGAGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS-3UTR CCA 90 bp | GCTCTCTCCTCCATGTTCTCTAACATCAACTGTTTCTGGGTAAGTGTTAGCATCTTCACGTGGTCCAGCTaGTTCATGACGCTGATCTCG | + |
|
Preference number: 4 (lower is better) Translates to: ALSSMFSNINCFWVSVSIFTWSS*FMTLIS Trigger: CGAGATCAGCGTCATGAACCAGCTGGACCACGTGAA...GATGCTAACACTTACCCAGAAACAGTTGATGTTAGAGAACATGGAGGAGAGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS-3UTR CCA 90 bp | GCTATGGCTGCCAGTCATCCCAGGGGTCAAGGCACCAGAACTGCTGATTTTTCCATTTCCAAGGATTCCTaGTGTAGAAGTGGTCTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: AMAASHPRGQGTRTADFSISKDS*CRSGLY Trigger: ATAAAGACCACTTCTACACCAGGAATCCTTGGAAAT...GGAAAAATCAGCAGTTCTGGTGCCTTGACCCCTGGGATGACTGGCAGCCATAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238977.3 |
||
| CDS-3UTR CCA 90 bp | CTTGGAAAAGTAGATGACTGGGGCCACAGAGCTGGCATCTGCATTGATTGGCCACAGCATTCTGGAAAGTaGATCCTGATGCTGAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: LGKVDDWGHRAGICIDWPQHSGK*ILMLNF Trigger: GAAATTCAGCATCAGGATCCACTTTCCAGAATGCTG...TGGCCAATCAATGCAGATGCCAGCTCTGTGGCCCCAGTCATCTACTTTTCCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238977.3 |
||
| CDS-3UTR GCA 90 bp | AGAAGCCAAAAAGGCAGAGAAACATCTTCCCCTCTGAACACTAAGTGGGATGTGATCCCCTCACAGATCTaGTTCATGAACAGGATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RSQKGRETSSPLNTKWDVIPSQI*FMNRMV Trigger: CACCATCCTGTTCATGAAGCAGATCTGTGAGGGGAT...CACATCCCACTTAGTGTTCAGAGGGGAAGATGTTTCTCTGCCTTTTTGGCTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS-3UTR GCA 90 bp | CCACATGTGATGGCTGATCTTGCCTTAGAAAGAAGCCTTATGTTCCAGCAAGCTAGGATGTACATCTGGTaGATGTACCGTATCCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PHVMADLALERSLMFQQARMYIW*MYRIPS Trigger: TGAGGGGATACGGTACATGCACCAGATGTACATCCT...AGCTTGCTGGAACATAAGGCTTCTTTCTAAGGCAAGATCAGCCATCACATGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS-3UTR GCA 90 bp | CTTGGAAAAGTAGATGACTGGGGCCACAGAGCTGGCATCTGCATTGATTGGCCATATCTCTCAGGTTGTTaGTTTCTTGTTTCTCCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LGKVDDWGHRAGICIDWPYLSGC*FLVSPD Trigger: GTCTGGAGAAACAAGAAAGCAACAACCTGAGAGATA...TGGCCAATCAATGCAGATGCCAGCTCTGTGGCCCCAGTCATCTACTTTTCCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238977.3 |
||
| CDS-3UTR CCA 90 bp | CCACATGTGATGGCTGATCTTGCCTTAGAAAGAAGCCTTATGTTCCAGCAAGCTATGTCCTCAGTGTGCTaGCTTTCAGTCGAGTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: PHVMADLALERSLMFQQAMSSVC*LSVECL Trigger: CAAACACTCGACTGAAAGCCAGCACACTGAGGACAT...AGCTTGCTGGAACATAAGGCTTCTTTCTAAGGCAAGATCAGCCATCACATGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238977.3 |
||
| 3UTR CAA 72 bp | TACCTCCTCAAACCACCAGGTTTAGTGGGGATGAACTaGCACATTAGATCAGAGCAAGGGGAACCCTGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: YLLKPPGLVGMN*HIRSEQGEPCK Trigger: TTTACAGGGTTCCCCTTGCTCTGATCTAATGTGCAAGTTCATCCCCACTAAACCTGGTGGTTTGAGGAGGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| 3UTR CAA 72 bp | GAATGTCAGTGGAATTTCAGGGAGTTTTGCAAAGTCTaGCCCCAAGCCATCCTGTTCCCTAAAGGCTACCTA | + |
|
Preference number: 4 (lower is better) Translates to: ECQWNFREFCKV*PQAILFPKGYL Trigger: TAGGTAGCCTTTAGGGAACAGGATGGCTTGGGGCAAGACTTTGCAAAACTCCCTGAAATTCCACTGACATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS-3UTR TCA 90 bp | CCACATGTGATGGCTGATCTTGCCTTAGAAAGAAGCCTTATGTTCCAGCAAGCTGTACAGATTGTCCACTaGAGCATGTTTGGCCATTAC | + |
|
Preference number: 4 (lower is better) Translates to: PHVMADLALERSLMFQQAVQIVH*SMFGHY Trigger: GTAATGGCCAAACATGCTTCAGTGGACAATCTGTAC...AGCTTGCTGGAACATAAGGCTTCTTTCTAAGGCAAGATCAGCCATCACATGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS-3UTR GCA 90 bp | AGAAGCCAAAAAGGCAGAGAAACATCTTCCCCTCTGAACACTAAGTGGGATGTGTCAGAACACCAGAGTTaGAGTTCTTCTGTGCACTCA | + |
|
Preference number: 4 (lower is better) Translates to: RSQKGRETSSPLNTKWDVSEHQS*SSSVHS Trigger: TGAGTGCACAGAAGAACTGCAACTCTGGTGTTCTGA...CACATCCCACTTAGTGTTCAGAGGGGAAGATGTTTCTCTGCCTTTTTGGCTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS-3UTR GCA 90 bp | CTTGGAAAAGTAGATGACTGGGGCCACAGAGCTGGCATCTGCATTGATTGGCCATCACTACATCTATTCTaGTCTTTTTGTTGTCCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LGKVDDWGHRAGICIDWPSLHLF*SFCCPH Trigger: GTGAGGACAACAAAAAGAGCAGAATAGATGTAGTGA...TGGCCAATCAATGCAGATGCCAGCTCTGTGGCCCCAGTCATCTACTTTTCCAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000238977.3 |
||
| CDS-3UTR CCA 90 bp | CTTGGAAAAGTAGATGACTGGGGCCACAGAGCTGGCATCTGCATTGATTGGCCATCTCTCTTAGCTCTGTaGAATTCCTCTGAACAAATT | + |
|
Preference number: 4 (lower is better) Translates to: LGKVDDWGHRAGICIDWPSLLAL*NSSEQI Trigger: AATTTGTTCAGAGGAATTCCACAGAGCTAAGAGAGA...TGGCCAATCAATGCAGATGCCAGCTCTGTGGCCCCAGTCATCTACTTTTCCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238977.3 |
||
| CDS-3UTR CCA 90 bp | CCACATGTGATGGCTGATCTTGCCTTAGAAAGAAGCCTTATGTTCCAGCAAGCTGAGAATTGGTCATTCTaGTCAGTTTTCTCTGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PHVMADLALERSLMFQQAENWSF*SVFSVR Trigger: CCTCACAGAGAAAACTGACCAGAATGACCAATTCTC...AGCTTGCTGGAACATAAGGCTTCTTTCTAAGGCAAGATCAGCCATCACATGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238977.3 |
||
| CDS-3UTR GCA 90 bp | GCTCTCTCCTCCATGTTCTCTAACATCAACTGTTTCTGGGTAAGTGTTAGCATCACAAGGATGATGTCATaGTTGGACTCAAAGGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: ALSSMFSNINCFWVSVSITRMMS*LDSKAS Trigger: TGATGCCTTTGAGTCCAAGCATGACATCATCCTTGT...GATGCTAACACTTACCCAGAAACAGTTGATGTTAGAGAACATGGAGGAGAGAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS-3UTR CCA 90 bp | AGAAGCCAAAAAGGCAGAGAAACATCTTCCCCTCTGAACACTAAGTGGGATGTGTTCTCGGAAGAGAATTaGTCATTCTGGTCAGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: RSQKGRETSSPLNTKWDVFSEEN*SFWSVF Trigger: GAAAACTGACCAGAATGACCAATTCTCTTCCGAGAA...CACATCCCACTTAGTGTTCAGAGGGGAAGATGTTTCTCTGCCTTTTTGGCTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000238977.3 |
||
| 3UTR CAA 72 bp | CCCAGTATCACCCATCCACTGAAGGCACTTTGCCATTaGGAAAAGAAATTCTCATCTCAAAAAGGTCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: PSITHPLKALCH*EKKFSSQKGHS Trigger: ACTGTGACCTTTTTGAGATGAGAATTTCTTTTCCAAATGGCAAAGTGCCTTCAGTGGATGGGTGATACTGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS TCA 90 bp | ATTCTCAAGTGCAGGTTCCTGCTTGGGGCCTCCCCATGCCGCCACTaGCCGAAACAGGCGCCAGAAGACCGAAGACGACAGAAGGCACAC | + |
|
Preference number: 5 (lower is better) Translates to: ILKCRFLLGASPCRH*PKQAPEDRRRQKAH Trigger: GTGTGCCTTCTGTCGTCTTCGGTCTTCTGGCGCCTGTTTCGGTCAGTGGCGGCATGGGGAGGCCCCAAGCAGGAACCTGCACTTGAGAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230119.2 |
||
| CDS-3UTR CAA 90 bp | CTTTCACTGAGCAGCCTCCCGTGGGTGTGGATCGAGGGGACAGACAAAGCCAGAGACAACCATGGGTGCTaGAGAGCTTCGCTGGCACTT | + |
|
Preference number: 5 (lower is better) Translates to: LSLSSLPWVWIEGTDKARDNHGC*RASLAL Trigger: AAGTGCCAGCGAAGCTCTCAAGCACCCATGGTTGTC...TCTGGCTTTGTCTGTCCCCTCGATCCACACCCACGGGAGGCTGCTCAGTGAAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS GCA 90 bp | GAGGTGGTCATTCCATCCTGGAGTCTATCACCCAGGCTTCTGGCTTaGCTGGTTTCCTCTGTCCTAGCTGTGGGCTCTTCCCCTCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: EVVIPSWSLSPRLLA*LVSSVLAVGSSPLL Trigger: GAGAAGAGGGGAAGAGCCCACAGCTAGGACAGAGGAAACCAGGCAAGCCAGAAGCCTGGGTGATAGACTCCAGGATGGAATGACCACCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000230119.2 ENSMUST00000238977.3 |
||
| CDS CCA 90 bp | ATACATTTTCCTCAGCCTGTGCATTCTCAAGTGCAGGTTCCTGCTTaGGGCCTCCCCATGCCGCCACTGACCGAAACAGGCGCCAGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: IHFPQPVHSQVQVPA*GLPMPPLTETGARR Trigger: TCTTCTGGCGCCTGTTTCGGTCAGTGGCGGCATGGGGAGGCCCCAAGCAGGAACCTGCACTTGAGAATGCACAGGCTGAGGAAAATGTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230119.2 |
||
| CDS-3UTR CAA 90 bp | CTTTCACTGAGCAGCCTCCCGTGGGTGTGGATCGAGGGGACAGACAAAGCCAGAAGGATGTTCTCAGGCTaGAGATCCAAGTGGAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: LSLSSLPWVWIEGTDKARRMFSG*RSKWRM Trigger: CATCCTCCACTTGGATCTCAAGCCTGAGAACATCCT...TCTGGCTTTGTCTGTCCCCTCGATCCACACCCACGGGAGGCTGCTCAGTGAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS-3UTR CAA 90 bp | ACTGAGCAGCCTCCCGTGGGTGTGGATCGAGGGGACAGACAAAGCCAGACTAACCTCACGGTGTACAGATaGTCCACTGAAGCATGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: TEQPPVGVDRGDRQSQTNLTVYR*STEACL Trigger: CAAACATGCTTCAGTGGACAATCTGTACACCGTGAG...GTTAGTCTGGCTTTGTCTGTCCCCTCGATCCACACCCACGGGAGGCTGCTCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS-3UTR CAA 90 bp | ACATGTGCTGCGGCTCCAAGCAGCTTTGGTAGAACTAAGAAGCCTCTTGTGCCCGACAACCATGGGTGCTaGAGAGCTTCGCTGGCACTT | + |
|
Preference number: 5 (lower is better) Translates to: TCAAAPSSFGRTKKPLVPDNHGC*RASLAL Trigger: AAGTGCCAGCGAAGCTCTCAAGCACCCATGGTTGTC...GGGCACAAGAGGCTTCTTAGTTCTACCAAAGCTGCTTGGAGCCGCAGCACATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS TCA 90 bp | GTTGCAGTTCTTCTGTGCACTCAGCCTGGAGTGGAGCTTGTGGTCTaGCAACCATGGGTGCTTGAGAGCTTCGCTGGCACTTATTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: VAVLLCTQPGVELVV*QPWVLESFAGTYSP Trigger: TGGAGAATAAGTGCCAGCGAAGCTCTCAAGCACCCATGGTTGTCAGACCACAAGCTCCACTCCAGGCTGAGTGCACAGAAGAACTGCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS CCA 90 bp | CCAGAGTTGCAGTTCTTCTGTGCACTCAGCCTGGAGTGGAGCTTGTaGTCTGACAACCATGGGTGCTTGAGAGCTTCGCTGGCACTTATT | + |
|
Preference number: 5 (lower is better) Translates to: PELQFFCALSLEWSL*SDNHGCLRASLALI Trigger: AATAAGTGCCAGCGAAGCTCTCAAGCACCCATGGTTGTCAGACCACAAGCTCCACTCCAGGCTGAGTGCACAGAAGAACTGCAACTCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS CCA 90 bp | TTCAGAACACCAGAGTTGCAGTTCTTCTGTGCACTCAGCCTGGAGTaGAGCTTGTGGTCTGACAACCATGGGTGCTTGAGAGCTTCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: FRTPELQFFCALSLE*SLWSDNHGCLRASL Trigger: CAGCGAAGCTCTCAAGCACCCATGGTTGTCAGACCACAAGCTCCACTCCAGGCTGAGTGCACAGAAGAACTGCAACTCTGGTGTTCTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS-3UTR CAA 90 bp | GCTATGGCTGCCAGTCATCCCAGGGGTCAAGGCACCAGAACTGCTGATTTTTCCAGCTTCTCTCTGGGCTaGTATCTTCTGGCCAATCCA | + |
|
Preference number: 5 (lower is better) Translates to: AMAASHPRGQGTRTADFSSFSLG*YLLANP Trigger: TGGATTGGCCAGAAGATACAAGCCCAGAGAGAAGCT...GGAAAAATCAGCAGTTCTGGTGCCTTGACCCCTGGGATGACTGGCAGCCATAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS-3UTR CAA 90 bp | TGCCCCAAGCCATCCTGTTCCCTAAAGGCTACCTACAGTGGTGCTCATATATCCTGGGACCTCCAGGTCTaGCTCTCTAGAGGTGGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: CPKPSCSLKATYSGAHISWDLQV*LSRGGH Trigger: ATGACCACCTCTAGAGAGCAAGACCTGGAGGTCCCA...GGATATATGAGCACCACTGTAGGTAGCCTTTAGGGAACAGGATGGCTTGGGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238977.3 |
||
| CDS-3UTR CAA 90 bp | GCTATGGCTGCCAGTCATCCCAGGGGTCAAGGCACCAGAACTGCTGATTTTTCCCAGCACTCCCTTCTCTaGACATCTGTAGGAGGACAT | + |
|
Preference number: 5 (lower is better) Translates to: AMAASHPRGQGTRTADFSQHSLL*TSVGGH Trigger: ATGTCCTCCTACAGATGTCAAGAGAAGGGAGTGCTG...GGAAAAATCAGCAGTTCTGGTGCCTTGACCCCTGGGATGACTGGCAGCCATAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238977.3 |
||
| CDS TCA 90 bp | GTGTACAGATTGTCCACTGAAGCATGTTTGGCCATTACCATCCGATaGTCAAATGGAGCGGCAGGAGCAGGGATGTCATCCAGTGGGACC | + |
|
Preference number: 5 (lower is better) Translates to: VYRLSTEACLAITIR*SNGAAGAGMSSSGT Trigger: GGTCCCACTGGATGACATCCCTGCTCCTGCCGCTCCATTTGATCATCGGATGGTAATGGCCAAACATGCTTCAGTGGACAATCTGTACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000230119.2 ENSMUST00000238977.3 |
||
| CDS GCA 90 bp | TGTGCACTCAGCCTGGAGTGGAGCTTGTGGTCTGACAACCATGGGTaGTTGAGAGCTTCGCTGGCACTTATTCTCCAACTCTTCTCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: CALSLEWSLWSDNHG*LRASLALILQLFSL Trigger: TAAGGAGAAGAGTTGGAGAATAAGTGCCAGCGAAGCTCTCAAGCACCCATGGTTGTCAGACCACAAGCTCCACTCCAGGCTGAGTGCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS CCA 90 bp | CCTGAAATTCCTCATCTTCTAAATCCCACCGGCACGCCAGGATGTTaGTCAGTGTCTCGGCATCATTGTCTCCCAAAAAGGGGGACAAGC | + |
|
Preference number: 5 (lower is better) Translates to: PEIPHLLNPTGTPGC*SVSRHHCLPKRGTS Trigger: GCTTGTCCCCCTTTTTGGGAGACAATGATGCCGAGACACTGACCAACATCCTGGCGTGCCGGTGGGATTTAGAAGATGAGGAATTTCAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS TCA 90 bp | GTGTACAGATTGTCCACTGAAGCATGTTTGGCCATTACCATCCGATaGTCAAATGGAGCGGCAGGAGCAGGGATGTCATCTGTGAGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: VYRLSTEACLAITIR*SNGAAGAGMSSVRA Trigger: AGCCCTCACAGATGACATCCCTGCTCCTGCCGCTCCATTTGATCATCGGATGGTAATGGCCAAACATGCTTCAGTGGACAATCTGTACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057428.13 |
||
| CDS GCA 90 bp | ATCTATTCTGCTCTTTTTGTTGTCCTCACTGAGGAAGCACTCCTCTaGCACCCTGCGCTTACTGCTGCCAGTAGACTCTGTCTGTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: IYSALFVVLTEEALL*HPALTAASRLCLFS Trigger: GCTGAACAGACAGAGTCTACTGGCAGCAGTAAGCGCAGGGTGGCAGAGGAGTGCTTCCTCAGTGAGGACAACAAAAAGAGCAGAATAGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000230119.2 ENSMUST00000238977.3 |
||
| CDS-3UTR CAA 90 bp | CTTGGAAAAGTAGATGACTGGGGCCACAGAGCTGGCATCTGCATTGATTGGCCAAGGATGTTCTCAGGCTaGAGATCCAAGTGGAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: LGKVDDWGHRAGICIDWPRMFSG*RSKWRM Trigger: CATCCTCCACTTGGATCTCAAGCCTGAGAACATCCT...TGGCCAATCAATGCAGATGCCAGCTCTGTGGCCCCAGTCATCTACTTTTCCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS TCA 90 bp | ATCAGGAGCTTGGAGATGAACTCCTTTGCCTCCTCCGAGATATCCTaGAATTCCTCATCTTCTAAATCCCACCGGCACGCCAGGATGTTG | + |
|
Preference number: 5 (lower is better) Translates to: IRSLEMNSFASSEIS*NSSSSKSHRHARML Trigger: CAACATCCTGGCGTGCCGGTGGGATTTAGAAGATGAGGAATTTCAGGATATCTCGGAGGAGGCAAAGGAGTTCATCTCCAAGCTCCTGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS CCA 90 bp | TCTCAGATTTGCTCACGGTGTACAGATTGTCCACTGAAGCATGTTTaGCCATTACCATCCGATGATCAAATGGAGCGGCAGGAGCAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: SQICSRCTDCPLKHV*PLPSDDQMERQEQG Trigger: TCCCTGCTCCTGCCGCTCCATTTGATCATCGGATGGTAATGGCCAAACATGCTTCAGTGGACAATCTGTACACCGTGAGCAAATCTGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057428.13 ENSMUST00000230119.2 ENSMUST00000238977.3 |
||
| CDS-3UTR CAA 90 bp | AGAAGCCAAAAAGGCAGAGAAACATCTTCCCCTCTGAACACTAAGTGGGATGTGCTAGCACTGCTCCACTaGCAGCTGCTGAAGCTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: RSQKGRETSSPLNTKWDVLALLH*QLLKLC Trigger: ACAGAGCTTCAGCAGCTGCAAGTGGAGCAGTGCTAG...CACATCCCACTTAGTGTTCAGAGGGGAAGATGTTTCTCTGCCTTTTTGGCTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238977.3 |
||
| CDS GCA 90 bp | TGGAGGATGTACATCTGGTGCATGTACCGTATCCCCTCACAGATCTaGTTCATGAACAGGATGGTGTCCAGCTCTGTCAAGTTGCAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: WRMYIWCMYRIPSQI*FMNRMVSSSVKLQF Trigger: AAACTGCAACTTGACAGAGCTGGACACCATCCTGTTCATGAAGCAGATCTGTGAGGGGATACGGTACATGCACCAGATGTACATCCTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057428.13 ENSMUST00000230119.2 ENSMUST00000238977.3 |
||
| CDS-3UTR CAA 90 bp | GCTATCTTCAGGCTCTTTCTTTCTAAACAGCACATGTGCTGCGGCTCCAAGCAGCCAGCTTCAGGCCTGTaGCTTTCTCTTCACACTTAT | + |
|
Preference number: 5 (lower is better) Translates to: AIFRLFLSKQHMCCGSKQPASGL*LSLHTY Trigger: ATAAGTGTGAAGAGAAAGCAACAGGCCTGAAGCTGG...CTGCTTGGAGCCGCAGCACATGTGCTGTTTAGAAAGAAAGAGCCTGAAGATAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS-3UTR CAA 90 bp | ACATGTGCTGCGGCTCCAAGCAGCTTTGGTAGAACTAAGAAGCCTCTTGTGCCCTCCAGCTCTGTCAAGTaGCAGTTTTCATCAATGATG | + |
|
Preference number: 5 (lower is better) Translates to: TCAAAPSSFGRTKKPLVPSSSVK*QFSSMM Trigger: CATCATTGATGAAAACTGCAACTTGACAGAGCTGGA...GGGCACAAGAGGCTTCTTAGTTCTACCAAAGCTGCTTGGAGCCGCAGCACATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS-3UTR CAA 90 bp | GCTATGGCTGCCAGTCATCCCAGGGGTCAAGGCACCAGAACTGCTGATTTTTCCCCATTTTCTCCTCCATaGTTATCTTCAGTGTCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: AMAASHPRGQGTRTADFSPFSPP*LSSVSC Trigger: ACAAGACACTGAAGATAACAATGGAGGAGAAAATGG...GGAAAAATCAGCAGTTCTGGTGCCTTGACCCCTGGGATGACTGGCAGCCATAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000238977.3 |
||
| CDS TCA 90 bp | TGTCAGGAGTGGGGCTTTCATCTCCCTCTGTCTCAGATTTGTAAATaGGGACACAATCATGACTGCTCAGCACTCCCTTCTCTTGACATC | + |
|
Preference number: 5 (lower is better) Translates to: CQEWGFHLPLSQICK*GHNHDCSALPSLDI Trigger: GATGTCAAGAGAAGGGAGTGCTGAGCAGTCATGATTGTGTCCTCATTTACAAATCTGAGACAGAGGGAGATGAAAGCCCCACTCCTGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238977.3 |
||
| CDS-3UTR CAA 90 bp | CTTGGAAAAGTAGATGACTGGGGCCACAGAGCTGGCATCTGCATTGATTGGCCATCCAGCTCTGTCAAGTaGCAGTTTTCATCAATGATG | + |
|
Preference number: 5 (lower is better) Translates to: LGKVDDWGHRAGICIDWPSSSVK*QFSSMM Trigger: CATCATTGATGAAAACTGCAACTTGACAGAGCTGGA...TGGCCAATCAATGCAGATGCCAGCTCTGTGGCCCCAGTCATCTACTTTTCCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS-3UTR CAA 90 bp | TGCCCCAAGCCATCCTGTTCCCTAAAGGCTACCTACAGTGGTGCTCATATATCCGATGTCCTTCCTCCTTaGACAATTATCCTTTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: CPKPSCSLKATYSGAHISDVLPP*TIILSS Trigger: AGATGAAAGGATAATTGTCAAAGGAGGAAGGACATC...GGATATATGAGCACCACTGTAGGTAGCCTTTAGGGAACAGGATGGCTTGGGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS-3UTR CAA 90 bp | CTTGGAAAAGTAGATGACTGGGGCCACAGAGCTGGCATCTGCATTGATTGGCCATTATCTCTCAGGTTGTaGCTTTCTTGTTTCTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LGKVDDWGHRAGICIDWPLSLRL*LSCFSR Trigger: TCTGGAGAAACAAGAAAGCAACAACCTGAGAGATAA...TGGCCAATCAATGCAGATGCCAGCTCTGTGGCCCCAGTCATCTACTTTTCCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238977.3 |
||
| CDS-3UTR CAA 90 bp | GCTCTCTCCTCCATGTTCTCTAACATCAACTGTTTCTGGGTAAGTGTTAGCATCCTCACGGTGTACAGATaGTCCACTGAAGCATGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: ALSSMFSNINCFWVSVSILTVYR*STEACL Trigger: CAAACATGCTTCAGTGGACAATCTGTACACCGTGAG...GATGCTAACACTTACCCAGAAACAGTTGATGTTAGAGAACATGGAGGAGAGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS-3UTR CAA 90 bp | AGAAGCCAAAAAGGCAGAGAAACATCTTCCCCTCTGAACACTAAGTGGGATGTGATTCTGCTCTTTTTGTaGTCCTCACTGAGGAAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: RSQKGRETSSPLNTKWDVILLFL*SSLRKH Trigger: GTGCTTCCTCAGTGAGGACAACAAAAAGAGCAGAAT...CACATCCCACTTAGTGTTCAGAGGGGAAGATGTTTCTCTGCCTTTTTGGCTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000238977.3 |
||
| CDS-3UTR CAA 90 bp | CCACATGTGATGGCTGATCTTGCCTTAGAAAGAAGCCTTATGTTCCAGCAAGCTGATGTCCTTCCTCCTTaGACAATTATCCTTTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: PHVMADLALERSLMFQQADVLPP*TIILSS Trigger: AGATGAAAGGATAATTGTCAAAGGAGGAAGGACATC...AGCTTGCTGGAACATAAGGCTTCTTTCTAAGGCAAGATCAGCCATCACATGTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS-3UTR CAA 90 bp | AGAAGCCAAAAAGGCAGAGAAACATCTTCCCCTCTGAACACTAAGTGGGATGTGTTTCTCGGAAGAGAATaGGTCATTCTGGTCAGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: RSQKGRETSSPLNTKWDVFLGRE*VILVSF Trigger: AAAACTGACCAGAATGACCAATTCTCTTCCGAGAAA...CACATCCCACTTAGTGTTCAGAGGGGAAGATGTTTCTCTGCCTTTTTGGCTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238977.3 |
||
| CDS-3UTR CAA 90 bp | CCACATGTGATGGCTGATCTTGCCTTAGAAAGAAGCCTTATGTTCCAGCAAGCTCAGGTTGTTGCTTTCTaGTTTCTCCAGACTTTCTAT | + |
|
Preference number: 5 (lower is better) Translates to: PHVMADLALERSLMFQQAQVVAF*FLQTFY Trigger: ATAGAAAGTCTGGAGAAACAAGAAAGCAACAACCTG...AGCTTGCTGGAACATAAGGCTTCTTTCTAAGGCAAGATCAGCCATCACATGTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238977.3 |
||
| CDS-3UTR CAA 90 bp | GCTCTCTCCTCCATGTTCTCTAACATCAACTGTTTCTGGGTAAGTGTTAGCATCTCTATTCTGCTCTTTTaGTTGTCCTCACTGAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: ALSSMFSNINCFWVSVSISILLF*LSSLRK Trigger: CTTCCTCAGTGAGGACAACAAAAAGAGCAGAATAGA...GATGCTAACACTTACCCAGAAACAGTTGATGTTAGAGAACATGGAGGAGAGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238977.3 |
||
| CDS CCA 90 bp | CTATGCATGGAGCATCTTTTGCACCTGCATTCTCTCTTAGCTCTGTaGAATTCCTCTGAACAAATTCTATCTTGTCTTGTCTTTCCACGT | + |
|
Preference number: 5 (lower is better) Translates to: LCMEHLLHLHSLLAL*NSSEQILSCLVFPR Trigger: ACGTGGAAAGACAAGACAAGATAGAATTTGTTCAGAGGAATTCCACAGAGCTAAGAGAGAATGCAGGTGCAAAAGATGCTCCATGCATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000230119.2 ENSMUST00000238977.3 |
||
| CDS-3UTR CAA 90 bp | GCTCTCTCCTCCATGTTCTCTAACATCAACTGTTTCTGGGTAAGTGTTAGCATCTGTTTATCTCTCAGGTaGTTGCTTTCTTGTTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ALSSMFSNINCFWVSVSICLSLR*LLSCFS Trigger: GGAGAAACAAGAAAGCAACAACCTGAGAGATAAACA...GATGCTAACACTTACCCAGAAACAGTTGATGTTAGAGAACATGGAGGAGAGAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238977.3 |
||
| CDS TCA 90 bp | TCCTCTGAACAAATTCTATCTTGTCTTGTCTTTCCACGTGACATATaGCACAACTCCTCTGCACTTCTAATGCACTGGTCTTCTCTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: SSEQILSCLVFPRDI*HNSSALLMHWSSLN Trigger: ATTCAGAGAAGACCAGTGCATTAGAAGTGCAGAGGAGTTGTGTCATATGTCACGTGGAAAGACAAGACAAGATAGAATTTGTTCAGAGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000230119.2 ENSMUST00000238977.3 |
||
| CDS CCA 90 bp | TTAAGTTTGGTAATCTTTTCTTTCTCGGAAGAGAATTGGTCATTCTaGTCAGTTTTCTCTGTGAGGGCTGATGTCCTTCCTCCTTTGACA | + |
|
Preference number: 5 (lower is better) Translates to: LSLVIFSFSEENWSF*SVFSVRADVLPPLT Trigger: TGTCAAAGGAGGAAGGACATCAGCCCTCACAGAGAAAACTGACCAGAATGACCAATTCTCTTCCGAGAAAGAAAAGATTACCAAACTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000230119.2 ENSMUST00000238977.3 |
||
| CDS CCA 72 bp | CCTCAGCCTGTGCATTCTCAAGTGCAGGTTCCTGCTTaGGGCCTCCCCATGCCGCCACTGACCGAAACAGGC | + |
|
Preference number: 6 (lower is better) Translates to: PQPVHSQVQVPA*GLPMPPLTETG Trigger: GCCTGTTTCGGTCAGTGGCGGCATGGGGAGGCCCCAAGCAGGAACCTGCACTTGAGAATGCACAGGCTGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230119.2 |
||
| CDS CAA 90 bp | TGGAGCGGCAGGAGCAGGGATGTCATCCAGTGGGACCTCCAGGTCTaGCTCTCTAGAGGTGGTCATTCCATCCTGGAGTCTATCACCCAG | + |
|
Preference number: 6 (lower is better) Translates to: WSGRSRDVIQWDLQV*LSRGGHSILESITQ Trigger: CTGGGTGATAGACTCCAGGATGGAATGACCACCTCTAGAGAGCAAGACCTGGAGGTCCCACTGGATGACATCCCTGCTCCTGCCGCTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000230119.2 ENSMUST00000238977.3 |
||
| CDS CAA 90 bp | TCCACCTCCTCCATGCACTGGAAAAACGCCACCTTCTCCAGCGGGTaGCTGCTGTGGCACGAGCTGATTTCTTCCAGCCTCTTCACCTTC | + |
|
Preference number: 6 (lower is better) Translates to: STSSMHWKNATFSSG*LLWHELISSSLFTF Trigger: GAAGGTGAAGAGGCTGGAAGAAATCAGCTCGTGCCACAGCAGCAACCCGCTGGAGAAGGTGGCGTTTTTCCAGTGCATGGAGGAGGTGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS TCA 72 bp | CTTCTGTGCACTCAGCCTGGAGTGGAGCTTGTGGTCTaGCAACCATGGGTGCTTGAGAGCTTCGCTGGCACT | + |
|
Preference number: 6 (lower is better) Translates to: LLCTQPGVELVV*QPWVLESFAGT Trigger: AGTGCCAGCGAAGCTCTCAAGCACCCATGGTTGTCAGACCACAAGCTCCACTCCAGGCTGAGTGCACAGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS CAA 72 bp | TCCATGCACTGGAAAAACGCCACCTTCTCCAGCGGGTaGCTGCTGTGGCACGAGCTGATTTCTTCCAGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: SMHWKNATFSSG*LLWHELISSSL Trigger: GAGGCTGGAAGAAATCAGCTCGTGCCACAGCAGCAACCCGCTGGAGAAGGTGGCGTTTTTCCAGTGCATGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS TCA 72 bp | CCACCTTCTCCAGCGGGTTGCTGCTGTGGCACGAGCTaGTTTCTTCCAGCCTCTTCACCTTCAACATACTGG | + |
|
Preference number: 6 (lower is better) Translates to: PPSPAGCCCGTS*FLPASSPSTYW Trigger: CCAGTATGTTGAAGGTGAAGAGGCTGGAAGAAATCAGCTCGTGCCACAGCAGCAACCCGCTGGAGAAGGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238977.3 |
||
| CDS GCA 72 bp | ATTCCATCCTGGAGTCTATCACCCAGGCTTCTGGCTTaGCTGGTTTCCTCTGTCCTAGCTGTGGGCTCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: IPSWSLSPRLLA*LVSSVLAVGSS Trigger: GGAAGAGCCCACAGCTAGGACAGAGGAAACCAGGCAAGCCAGAAGCCTGGGTGATAGACTCCAGGATGGAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000230119.2 ENSMUST00000238977.3 |
||
| CDS GCA 72 bp | GGAGCAGGGATGTCATCCAGTGGGACCTCCAGGTCTTaGTCTCTAGAGGTGGTCATTCCATCCTGGAGTCTA | + |
|
Preference number: 6 (lower is better) Translates to: GAGMSSSGTSRS*SLEVVIPSWSL Trigger: TAGACTCCAGGATGGAATGACCACCTCTAGAGAGCAAGACCTGGAGGTCCCACTGGATGACATCCCTGCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000230119.2 ENSMUST00000238977.3 |
||
| CDS CCA 72 bp | CAGTTCTTCTGTGCACTCAGCCTGGAGTGGAGCTTGTaGTCTGACAACCATGGGTGCTTGAGAGCTTCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: QFFCALSLEWSL*SDNHGCLRASL Trigger: CAGCGAAGCTCTCAAGCACCCATGGTTGTCAGACCACAAGCTCCACTCCAGGCTGAGTGCACAGAAGAACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS CAA 72 bp | CATTCCATCCTGGAGTCTATCACCCAGGCTTCTGGCTaGCCTGGTTTCCTCTGTCCTAGCTGTGGGCTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: HSILESITQASG*PGFLCPSCGLF Trigger: GAAGAGCCCACAGCTAGGACAGAGGAAACCAGGCAAGCCAGAAGCCTGGGTGATAGACTCCAGGATGGAATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000230119.2 ENSMUST00000238977.3 |
||
| CDS CAA 72 bp | AGGAGCAGGGATGTCATCCAGTGGGACCTCCAGGTCTaGCTCTCTAGAGGTGGTCATTCCATCCTGGAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: RSRDVIQWDLQV*LSRGGHSILES Trigger: AGACTCCAGGATGGAATGACCACCTCTAGAGAGCAAGACCTGGAGGTCCCACTGGATGACATCCCTGCTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000230119.2 ENSMUST00000238977.3 |
||
| CDS CAA 90 bp | ACACCAGAGTTGCAGTTCTTCTGTGCACTCAGCCTGGAGTGGAGCTaGTGGTCTGACAACCATGGGTGCTTGAGAGCTTCGCTGGCACTT | + |
|
Preference number: 6 (lower is better) Translates to: TPELQFFCALSLEWS*WSDNHGCLRASLAL Trigger: AAGTGCCAGCGAAGCTCTCAAGCACCCATGGTTGTCAGACCACAAGCTCCACTCCAGGCTGAGTGCACAGAAGAACTGCAACTCTGGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS GCA 72 bp | AGCCTGGAGTGGAGCTTGTGGTCTGACAACCATGGGTaGTTGAGAGCTTCGCTGGCACTTATTCTCCAACTC | + |
|
Preference number: 6 (lower is better) Translates to: SLEWSLWSDNHG*LRASLALILQL Trigger: GAGTTGGAGAATAAGTGCCAGCGAAGCTCTCAAGCACCCATGGTTGTCAGACCACAAGCTCCACTCCAGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS CCA 72 bp | CCAGAGTTGCAGTTCTTCTGTGCACTCAGCCTGGAGTaGAGCTTGTGGTCTGACAACCATGGGTGCTTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: PELQFFCALSLE*SLWSDNHGCLR Trigger: TCTCAAGCACCCATGGTTGTCAGACCACAAGCTCCACTCCAGGCTGAGTGCACAGAAGAACTGCAACTCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS CCA 72 bp | GAACACCAGAGTTGCAGTTCTTCTGTGCACTCAGCCTaGAGTGGAGCTTGTGGTCTGACAACCATGGGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: EHQSCSSSVHSA*SGACGLTTMGA Trigger: AGCACCCATGGTTGTCAGACCACAAGCTCCACTCCAGGCTGAGTGCACAGAAGAACTGCAACTCTGGTGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS CCA 72 bp | TCCAGGTCTTGCTCTCTAGAGGTGGTCATTCCATCCTaGAGTCTATCACCCAGGCTTCTGGCTTGCCTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: SRSCSLEVVIPS*SLSPRLLACLV Trigger: AACCAGGCAAGCCAGAAGCCTGGGTGATAGACTCCAGGATGGAATGACCACCTCTAGAGAGCAAGACCTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000230119.2 ENSMUST00000238977.3 |
||
| CDS CAA 72 bp | TTGCAGTTCTTCTGTGCACTCAGCCTGGAGTGGAGCTaGTGGTCTGACAACCATGGGTGCTTGAGAGCTTCG | + |
|
Preference number: 6 (lower is better) Translates to: LQFFCALSLEWS*WSDNHGCLRAS Trigger: CGAAGCTCTCAAGCACCCATGGTTGTCAGACCACAAGCTCCACTCCAGGCTGAGTGCACAGAAGAACTGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS CCA 72 bp | CCTCATCTTCTAAATCCCACCGGCACGCCAGGATGTTaGTCAGTGTCTCGGCATCATTGTCTCCCAAAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: PHLLNPTGTPGC*SVSRHHCLPKR Trigger: CCTTTTTGGGAGACAATGATGCCGAGACACTGACCAACATCCTGGCGTGCCGGTGGGATTTAGAAGATGAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS CCA 72 bp | TCATGGGACGGGTCACCATTCATGTCCTCAGTGTGCTaGCTTTCAGTCGAGTGTTTGTCTAGCACTGCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: SWDGSPFMSSVC*LSVECLSSTAP Trigger: TGGAGCAGTGCTAGACAAACACTCGACTGAAAGCCAGCACACTGAGGACATGAATGGTGACCCGTCCCATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000230119.2 ENSMUST00000238977.3 |
||
| CDS CAA 72 bp | CTGGAGTGGAGCTTGTGGTCTGACAACCATGGGTGCTaGAGAGCTTCGCTGGCACTTATTCTCCAACTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LEWSLWSDNHGC*RASLALILQLF Trigger: GAAGAGTTGGAGAATAAGTGCCAGCGAAGCTCTCAAGCACCCATGGTTGTCAGACCACAAGCTCCACTCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS CAA 90 bp | GCACTCAGCCTGGAGTGGAGCTTGTGGTCTGACAACCATGGGTGCTaGAGAGCTTCGCTGGCACTTATTCTCCAACTCTTCTCCTTAATC | + |
|
Preference number: 6 (lower is better) Translates to: ALSLEWSLWSDNHGC*RASLALILQLFSLI Trigger: GATTAAGGAGAAGAGTTGGAGAATAAGTGCCAGCGAAGCTCTCAAGCACCCATGGTTGTCAGACCACAAGCTCCACTCCAGGCTGAGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS TCA 72 bp | TGGAGTGGAGCTTGTGGTCTGACAACCATGGGTGCTTaGGAGCTTCGCTGGCACTTATTCTCCAACTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: WSGACGLTTMGA*ELRWHLFSNSS Trigger: AGAAGAGTTGGAGAATAAGTGCCAGCGAAGCTCTCAAGCACCCATGGTTGTCAGACCACAAGCTCCACTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS TCA 72 bp | TTGTCCACTGAAGCATGTTTGGCCATTACCATCCGATaGTCAAATGGAGCGGCAGGAGCAGGGATGTCATCC | + |
|
Preference number: 6 (lower is better) Translates to: LSTEACLAITIR*SNGAAGAGMSS Trigger: GGATGACATCCCTGCTCCTGCCGCTCCATTTGATCATCGGATGGTAATGGCCAAACATGCTTCAGTGGACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000230119.2 ENSMUST00000238977.3 |
||
| CDS GCA 72 bp | CTTTCATGGGACGGGTCACCATTCATGTCCTCAGTGTaGTGGCTTTCAGTCGAGTGTTTGTCTAGCACTGCT | + |
|
Preference number: 6 (lower is better) Translates to: LSWDGSPFMSSV*WLSVECLSSTA Trigger: AGCAGTGCTAGACAAACACTCGACTGAAAGCCAGCACACTGAGGACATGAATGGTGACCCGTCCCATGAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000230119.2 ENSMUST00000238977.3 |
||
| CDS CAA 72 bp | TCCTCATCTTCTAAATCCCACCGGCACGCCAGGATGTaGGTCAGTGTCTCGGCATCATTGTCTCCCAAAAAG | + |
|
Preference number: 6 (lower is better) Translates to: SSSSKSHRHARM*VSVSASLSPKK Trigger: CTTTTTGGGAGACAATGATGCCGAGACACTGACCAACATCCTGGCGTGCCGGTGGGATTTAGAAGATGAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS CAA 72 bp | GGCTTTCAGTCGAGTGTTTGTCTAGCACTGCTCCACTaGCAGCTGCTGAAGCTCTGTTCTCAGCTTCTACTC | + |
|
Preference number: 6 (lower is better) Translates to: GFQSSVCLALLH*QLLKLCSQLLL Trigger: GAGTAGAAGCTGAGAACAGAGCTTCAGCAGCTGCAAGTGGAGCAGTGCTAGACAAACACTCGACTGAAAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000230119.2 ENSMUST00000238977.3 |
||
| CDS CAA 72 bp | TTCATGTCCTCAGTGTGCTGGCTTTCAGTCGAGTGTTaGTCTAGCACTGCTCCACTTGCAGCTGCTGAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: FMSSVCWLSVEC*SSTAPLAAAEA Trigger: AGCTTCAGCAGCTGCAAGTGGAGCAGTGCTAGACAAACACTCGACTGAAAGCCAGCACACTGAGGACATGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000230119.2 ENSMUST00000238977.3 |
||
| CDS TCA 72 bp | TTGTCCACTGAAGCATGTTTGGCCATTACCATCCGATaGTCAAATGGAGCGGCAGGAGCAGGGATGTCATCT | + |
|
Preference number: 6 (lower is better) Translates to: LSTEACLAITIR*SNGAAGAGMSS Trigger: AGATGACATCCCTGCTCCTGCCGCTCCATTTGATCATCGGATGGTAATGGCCAAACATGCTTCAGTGGACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057428.13 |
||
| CDS TCA 72 bp | TTGGAGATGAACTCCTTTGCCTCCTCCGAGATATCCTaGAATTCCTCATCTTCTAAATCCCACCGGCACGCC | + |
|
Preference number: 6 (lower is better) Translates to: LEMNSFASSEIS*NSSSSKSHRHA Trigger: GGCGTGCCGGTGGGATTTAGAAGATGAGGAATTTCAGGATATCTCGGAGGAGGCAAAGGAGTTCATCTCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS TCA 72 bp | TCACTACATCTATTCTGCTCTTTTTGTTGTCCTCACTaGGGAAGCACTCCTCTGCCACCCTGCGCTTACTGC | + |
|
Preference number: 6 (lower is better) Translates to: SLHLFCSFCCPH*GSTPLPPCAYC Trigger: GCAGTAAGCGCAGGGTGGCAGAGGAGTGCTTCCTCAGTGAGGACAACAAAAAGAGCAGAATAGATGTAGTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000230119.2 ENSMUST00000238977.3 |
||
| CDS GCA 72 bp | TACATCTGGTGCATGTACCGTATCCCCTCACAGATCTaGTTCATGAACAGGATGGTGTCCAGCTCTGTCAAG | + |
|
Preference number: 6 (lower is better) Translates to: YIWCMYRIPSQI*FMNRMVSSSVK Trigger: CTTGACAGAGCTGGACACCATCCTGTTCATGAAGCAGATCTGTGAGGGGATACGGTACATGCACCAGATGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057428.13 ENSMUST00000230119.2 ENSMUST00000238977.3 |
||
| CDS GCA 72 bp | TCAGGCTTGAGATCCAAGTGGAGGATGTACATCTGGTaGATGTACCGTATCCCCTCACAGATCTGCTTCATG | + |
|
Preference number: 6 (lower is better) Translates to: SGLRSKWRMYIW*MYRIPSQICFM Trigger: CATGAAGCAGATCTGTGAGGGGATACGGTACATGCACCAGATGTACATCCTCCACTTGGATCTCAAGCCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057428.13 ENSMUST00000230119.2 ENSMUST00000238977.3 |
||
| CDS CAA 72 bp | CCTCCTAGGATCTCAGATTTGCTCACGGTGTACAGATaGTCCACTGAAGCATGTTTGGCCATTACCATCCGA | + |
|
Preference number: 6 (lower is better) Translates to: PPRISDLLTVYR*STEACLAITIR Trigger: TCGGATGGTAATGGCCAAACATGCTTCAGTGGACAATCTGTACACCGTGAGCAAATCTGAGATCCTAGGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057428.13 ENSMUST00000230119.2 ENSMUST00000238977.3 |
||
| CDS TCA 72 bp | TGGGGCTTTCATCTCCCTCTGTCTCAGATTTGTAAATaGGGACACAATCATGACTGCTCAGCACTCCCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: WGFHLPLSQICK*GHNHDCSALPS Trigger: AGAAGGGAGTGCTGAGCAGTCATGATTGTGTCCTCATTTACAAATCTGAGACAGAGGGAGATGAAAGCCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238977.3 |
||
| CDS GCA 72 bp | CTTCTCCTTAATCAGGAGCTTGGAGATGAACTCCTTTaGCTCCTCCGAGATATCCTGAAATTCCTCATCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LLLNQELGDELL*LLRDILKFLIF Trigger: GAAGATGAGGAATTTCAGGATATCTCGGAGGAGGCAAAGGAGTTCATCTCCAAGCTCCTGATTAAGGAGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS TCA 72 bp | GATCTCAGATTTGCTCACGGTGTACAGATTGTCCACTaGAGCATGTTTGGCCATTACCATCCGATGATCAAA | + |
|
Preference number: 6 (lower is better) Translates to: DLRFAHGVQIVH*SMFGHYHPMIK Trigger: TTTGATCATCGGATGGTAATGGCCAAACATGCTTCAGTGGACAATCTGTACACCGTGAGCAAATCTGAGATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057428.13 ENSMUST00000230119.2 ENSMUST00000238977.3 |
||
| CDS CCA 72 bp | TTACTGCTGCCAGTAGACTCTGTCTGTTCAGCATTCTaGAAAGTGGATCCTGATGCTGAATTTCCAAGGATT | + |
|
Preference number: 6 (lower is better) Translates to: LLLPVDSVCSAF*KVDPDAEFPRI Trigger: AATCCTTGGAAATTCAGCATCAGGATCCACTTTCCAGAATGCTGAACAGACAGAGTCTACTGGCAGCAGTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000230119.2 ENSMUST00000238977.3 |
||
| CDS CAA 72 bp | CCTCCTTTGACAATTATCCTTTCATCTAGTGCACGGTaGGACCATACATTTTCCTCAGCCTCATTGTCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: PPLTIILSSSAR*DHTFSSASLSP Trigger: TGGAGACAATGAGGCTGAGGAAAATGTATGGTCCAACCGTGCACTAGATGAAAGGATAATTGTCAAAGGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057428.13 ENSMUST00000238977.3 |
||
| CDS TCA 72 bp | GAATTGGTCATTCTGGTCAGTTTTCTCTGTGAGGGCTaGTGTCCTTCCTCCTTTGACAATTATCCTTTCATC | + |
|
Preference number: 6 (lower is better) Translates to: ELVILVSFLCEG*CPSSFDNYPFI Trigger: GATGAAAGGATAATTGTCAAAGGAGGAAGGACATCAGCCCTCACAGAGAAAACTGACCAGAATGACCAATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000230119.2 ENSMUST00000238977.3 |
||
| CDS GCA 72 bp | AGTCTTAATGATTTTAGCAGCCAGCTTCAGGCCTGTTaGTTTCTCTTCACACTTATGTACCTGACCAAAACG | + |
|
Preference number: 6 (lower is better) Translates to: SLNDFSSQLQAC*FLFTLMYLTKT Trigger: CGTTTTGGTCAGGTACATAAGTGTGAAGAGAAAGCAACAGGCCTGAAGCTGGCTGCTAAAATCATTAAGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057428.13 ENSMUST00000230119.2 ENSMUST00000238977.3 |
||
| CDS TCA 72 bp | CAAATTCTATCTTGTCTTGTCTTTCCACGTGACATATaGCACAACTCCTCTGCACTTCTAATGCACTGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: QILSCLVFPRDI*HNSSALLMHWS Trigger: AGACCAGTGCATTAGAAGTGCAGAGGAGTTGTGTCATATGTCACGTGGAAAGACAAGACAAGATAGAATTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000230119.2 ENSMUST00000238977.3 |
||
| CDS CCA 72 bp | GAGCATCTTTTGCACCTGCATTCTCTCTTAGCTCTGTaGAATTCCTCTGAACAAATTCTATCTTGTCTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: EHLLHLHSLLAL*NSSEQILSCLV Trigger: GACAAGACAAGATAGAATTTGTTCAGAGGAATTCCACAGAGCTAAGAGAGAATGCAGGTGCAAAAGATGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000230119.2 ENSMUST00000238977.3 |
||
| CDS CAA 72 bp | CTCTGTGGAATTCCTCTGAACAAATTCTATCTTGTCTaGTCTTTCCACGTGACATATGACACAACTCCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: LCGIPLNKFYLV*SFHVTYDTTPL Trigger: CAGAGGAGTTGTGTCATATGTCACGTGGAAAGACAAGACAAGATAGAATTTGTTCAGAGGAATTCCACAGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000230119.2 ENSMUST00000238977.3 |
||
| CDS CAA 90 bp | TTTTCTCCTCCATTGTTATCTTCAGTGTCTTGTTTATCTCTCAGGTaGTTGCTTTCTTGTTTCTCCAGACTTTCTATGCATGGAGCATCT | + |
|
Preference number: 6 (lower is better) Translates to: FSPPLLSSVSCLSLR*LLSCFSRLSMHGAS Trigger: AGATGCTCCATGCATAGAAAGTCTGGAGAAACAAGAAAGCAACAACCTGAGAGATAAACAAGACACTGAAGATAACAATGGAGGAGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000230119.2 ENSMUST00000238977.3 |
||
| CDS CAA 72 bp | TTCAGTGTCTTGTTTATCTCTCAGGTTGTTGCTTTCTaGTTTCTCCAGACTTTCTATGCATGGAGCATCTTT | + |
|
Preference number: 6 (lower is better) Translates to: FSVLFISQVVAF*FLQTFYAWSIF Trigger: AAAGATGCTCCATGCATAGAAAGTCTGGAGAAACAAGAAAGCAACAACCTGAGAGATAAACAAGACACTGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000230119.2 ENSMUST00000238977.3 |
||
| CDS CAA 72 bp | GAATCGTCCTTAGAAGAAATCCCATTTTCTCCTCCATaGTTATCTTCAGTGTCTTGTTTATCTCTCAGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: ESSLEEIPFSPP*LSSVSCLSLRL Trigger: CAACCTGAGAGATAAACAAGACACTGAAGATAACAATGGAGGAGAAAATGGGATTTCTTCTAAGGACGATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000230119.2 ENSMUST00000238977.3 |
||