RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MYLK3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000031698

Ensembl transcript IDs: ENSMUST00000034133.14, ENSMUST00000121972.8, ENSMUST00000122452.8, ENSMUST00000137290.2

Found 263 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR GCA 90 bp AACGATTCTCCCTGCCTCATCAGCCATCAGTTGCCAGTAGCTCCGCCAGTAGGGCATCCTGAGCGTGCCTaGTCTTATTACCAAAAGGAA +
Preference number: 2 (lower is better)
Translates to: NDSPCLISHQLPVAPPVGHPERA*SYYQKE
Trigger: TTCCTTTTGGTAATAAGAGCAGGCACGCTCAGGATG...CCCTACTGGCGGAGCTACTGGCAACTGATGGCTGATGAGGCAGGGAGAATCGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
3UTR-3UTR CCA 90 bp TGCATATTGATCATATCCGTCTACCTGCTTCCAACTGTCCCTAATGTCCTGCCCACTGCCCATGGCACATaGGTATGTAGCATCCACTGG +
Preference number: 2 (lower is better)
Translates to: CILIISVYLLPTVPNVLPTAHGT*VCSIHW
Trigger: CCAGTGGATGCTACATACCCATGTGCCATGGGCAGT...GGGCAGGACATTAGGGACAGTTGGAAGCAGGTAGACGGATATGATCAATATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034133.14
3UTR-3UTR GCA 90 bp AACGATTCTCCCTGCCTCATCAGCCATCAGTTGCCAGTAGCTCCGCCAGTAGGGTCAATTCTGAGTCTTTaGACTATTACCCACTGTAAA +
Preference number: 2 (lower is better)
Translates to: NDSPCLISHQLPVAPPVGSILSL*TITHCK
Trigger: TTTACAGTGGGTAATAGTGCAAAGACTCAGAATTGA...CCCTACTGGCGGAGCTACTGGCAACTGATGGCTGATGAGGCAGGGAGAATCGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
3UTR CAA 90 bp TTTAAGAATTTTATACAATGTTTCCGTCAAATTCATCCCCCACTGTaGGACCTAATTCCTCCCTCTTCCATACCTCACTCCCTACTGGCT +
Preference number: 2 (lower is better)
Translates to: FKNFIQCFRQIHPPL*DLIPPSSIPHSLLA
Trigger: AGCCAGTAGGGAGTGAGGTATGGAAGAGGGAGGAATTAGGTCCAACAGTGGGGGATGAATTTGACGGAAACATTGTATAAAATTCTTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
3UTR-3UTR GCA 90 bp TGGGCCTCAGGAGTTTCCTCCCATTCTCATTGGAATTTTGACCAACTTGATCTTGCTGAGTGCATAGTTTaGATTTTGATCAATTCTGAG +
Preference number: 2 (lower is better)
Translates to: WASGVSSHSHWNFDQLDLAECIV*ILINSE
Trigger: CTCAGAATTGATCAAAATGCAAACTATGCACTCAGC...AAGATCAAGTTGGTCAAAATTCCAATGAGAATGGGAGGAAACTCCTGAGGCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
3UTR-3UTR GCA 90 bp GTCTTAACGACATCTCGTAGGACTCGTCTTCATCTACCAACTCTTACATTCTTTTCACCCAGAGCTGAGTaGATAGTTTGCATTTTGATC +
Preference number: 2 (lower is better)
Translates to: VLTTSRRTRLHLPTLTFFSPRAE*IVCILI
Trigger: GATCAAAATGCAAACTATGCACTCAGCTCTGGGTGA...AAAGAATGTAAGAGTTGGTAGATGAAGACGAGTCCTACGAGATGTCGTTAAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
3UTR-3UTR GCA 90 bp TTCTTTAAGAATTTTATACAATGTTTCCGTCAAATTCATCCCCCACTGTTGGACCATCCTGAGCGTGCCTaGTCTTATTACCAAAAGGAA +
Preference number: 2 (lower is better)
Translates to: FFKNFIQCFRQIHPPLLDHPERA*SYYQKE
Trigger: TTCCTTTTGGTAATAAGAGCAGGCACGCTCAGGATG...GTCCAACAGTGGGGGATGAATTTGACGGAAACATTGTATAAAATTCTTAAAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
3UTR-3UTR CAA 90 bp ACTCTTACATTCTTTCTGCCCCTTCCTCTGAGACGCTCCCTGAGCCTTGCACAGTATTACCACTTCGTGTaGCCTCAAGAATTCCCAGGC +
Preference number: 3 (lower is better)
Translates to: TLTFFLPLPLRRSLSLAQYYHFV*PQEFPG
Trigger: GCCTGGGAATTCTTGAGGCAACACGAAGTGGTAATA...CTGTGCAAGGCTCAGGGAGCGTCTCAGAGGAAGGGGCAGAAAGAATGTAAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
3UTR TCA 72 bp CTTGATCTTGTGCAGGTAGCCACAGATGCTGTGAGTTaGCGCCTACAAAAGCCATGTCATGTCTTAACGACA +
Preference number: 3 (lower is better)
Translates to: LDLVQVATDAVS*RLQKPCHVLTT
Trigger: TGTCGTTAAGACATGACATGGCTTTTGTAGGCGTCAACTCACAGCATCTGTGGCTACCTGCACAAGATCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
3UTR-3UTR CAA 90 bp TGGGCCTCAGGAGTTTCCTCCCATTCTCATTGGAATTTTGACCAACTTGATCTTTATTACCACTTCGTGTaGCCTCAAGAATTCCCAGGC +
Preference number: 3 (lower is better)
Translates to: WASGVSSHSHWNFDQLDLYYHFV*PQEFPG
Trigger: GCCTGGGAATTCTTGAGGCAACACGAAGTGGTAATA...AAGATCAAGTTGGTCAAAATTCCAATGAGAATGGGAGGAAACTCCTGAGGCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
3UTR TCA 72 bp ATCAATAATAGCAAAGCGCCAATCTCCGTAAAATCTTaGGTAATCTCTTCATATTACCACTTCGTGTTGCCT +
Preference number: 3 (lower is better)
Translates to: INNSKAPISVKS*VISSYYHFVLP
Trigger: AGGCAACACGAAGTGGTAATATGAAGAGATTACTCAAGATTTTACGGAGATTGGCGCTTTGCTATTATTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR GCA 90 bp AACGATTCTCCCTGCCTCATCAGCCATCAGTTGCCAGTAGCTCCGCCAGTAGGGTCCTGGGCCCTGGGCTaGGTGGTCCTTCCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: NDSPCLISHQLPVAPPVGSWALG*VVLPRL
Trigger: GAGCCTGGGAAGGACCACGCAGCCCAGGGCCCAGGA...CCCTACTGGCGGAGCTACTGGCAACTGATGGCTGATGAGGCAGGGAGAATCGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR CCA 90 bp GCTCCGCCAGTAGGGGTGGGCCTCAGGAGTTTCCTCCCATTCTCATTGGAATTTCCCGCTGCTGGCCTCTaGTGCTGGGCCTGCACAGTG +
Preference number: 4 (lower is better)
Translates to: APPVGVGLRSFLPFSLEFPAAGL*CWACTV
Trigger: CACTGTGCAGGCCCAGCACCAGAGGCCAGCAGCGGG...AAATTCCAATGAGAATGGGAGGAAACTCCTGAGGCCCACCCCTACTGGCGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000122452.8
CDS-3UTR GCA 90 bp ACTCTTACATTCTTTCTGCCCCTTCCTCTGAGACGCTCCCTGAGCCTTGCACAGTCCTGGGCCCTGGGCTaGGTGGTCCTTCCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: TLTFFLPLPLRRSLSLAQSWALG*VVLPRL
Trigger: GAGCCTGGGAAGGACCACGCAGCCCAGGGCCCAGGA...CTGTGCAAGGCTCAGGGAGCGTCTCAGAGGAAGGGGCAGAAAGAATGTAAGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR CCA 90 bp TCCCTGCCCATCCTGAGCGTGCCTGCTCTTATTACCAAAAGGAAGGGTGCGGGGAGCTTCAGTTCTTCCTaGGCCCTGGGCTGCGTGGTC +
Preference number: 4 (lower is better)
Translates to: SLPILSVPALITKRKGAGSFSSS*ALGCVV
Trigger: GACCACGCAGCCCAGGGCCCAGGAAGAACTGAAGCT...CCCCGCACCCTTCCTTTTGGTAATAAGAGCAGGCACGCTCAGGATGGGCAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR TCA 90 bp GCTCCGCCAGTAGGGGTGGGCCTCAGGAGTTTCCTCCCATTCTCATTGGAATTTAGTGGTCCTAGGGGCTaGGGGAGAGGCCCTGAACTC +
Preference number: 4 (lower is better)
Translates to: APPVGVGLRSFLPFSLEFSGPRG*GRGPEL
Trigger: GAGTTCAGGGCCTCTCCCTCAGCCCCTAGGACCACT...AAATTCCAATGAGAATGGGAGGAAACTCCTGAGGCCCACCCCTACTGGCGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR GCA 90 bp ACTCTTACATTCTTTCTGCCCCTTCCTCTGAGACGCTCCCTGAGCCTTGCACAGCTCTGGTGCTGGGCCTaGACAGTGCTGGGACAGGGC +
Preference number: 4 (lower is better)
Translates to: TLTFFLPLPLRRSLSLAQLWCWA*TVLGQG
Trigger: GCCCTGTCCCAGCACTGTGCAGGCCCAGCACCAGAG...CTGTGCAAGGCTCAGGGAGCGTCTCAGAGGAAGGGGCAGAAAGAATGTAAGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000122452.8
CDS-3UTR GCA 90 bp AACGATTCTCCCTGCCTCATCAGCCATCAGTTGCCAGTAGCTCCGCCAGTAGGGCTGCTCCTGGGTCTATaGCTTGCTGCAGGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: NDSPCLISHQLPVAPPVGLLLGL*LAAGLW
Trigger: CCACAGACCTGCAGCAAGGCATAGACCCAGGAGCAG...CCCTACTGGCGGAGCTACTGGCAACTGATGGCTGATGAGGCAGGGAGAATCGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR CCA 90 bp TCCCTGCCCATCCTGAGCGTGCCTGCTCTTATTACCAAAAGGAAGGGTGCGGGGCTCCAGTGTTCTCACTaGCTGTCTCAGGAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: SLPILSVPALITKRKGAGLQCSH*LSQEAW
Trigger: CCAGGCTTCCTGAGACAGCCAGTGAGAACACTGGAG...CCCCGCACCCTTCCTTTTGGTAATAAGAGCAGGCACGCTCAGGATGGGCAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR CCA 90 bp TCCCTGCCCATCCTGAGCGTGCCTGCTCTTATTACCAAAAGGAAGGGTGCGGGGCACAGTCCCAAGGCCTaGAGCTTCTGCAGAGCCAAT +
Preference number: 4 (lower is better)
Translates to: SLPILSVPALITKRKGAGHSPKA*SFCRAN
Trigger: ATTGGCTCTGCAGAAGCTCCAGGCCTTGGGACTGTG...CCCCGCACCCTTCCTTTTGGTAATAAGAGCAGGCACGCTCAGGATGGGCAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR CCA 90 bp AACGATTCTCCCTGCCTCATCAGCCATCAGTTGCCAGTAGCTCCGCCAGTAGGGAGGGCTCACTGCTCCTaGGTCTATGCCTTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: NDSPCLISHQLPVAPPVGRAHCS*VYALLQ
Trigger: CTGCAGCAAGGCATAGACCCAGGAGCAGTGAGCCCT...CCCTACTGGCGGAGCTACTGGCAACTGATGGCTGATGAGGCAGGGAGAATCGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
3UTR CAA 72 bp AAGGAAAACGATTCTCCCTGCCTCATCAGCCATCAGTaGCCAGTAGCTCCGCCAGTAGGGGTGGGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: KENDSPCLISHQ*PVAPPVGVGLR
Trigger: CCTGAGGCCCACCCCTACTGGCGGAGCTACTGGCAACTGATGGCTGATGAGGCAGGGAGAATCGTTTTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR GCA 90 bp AACGATTCTCCCTGCCTCATCAGCCATCAGTTGCCAGTAGCTCCGCCAGTAGGGAGAACTTCAACTCCCTaGCTCAGTGAGGCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: NDSPCLISHQLPVAPPVGRTSTP*LSEAPA
Trigger: GGCAGGAGCCTCACTGAGGCAGGGAGTTGAAGTTCT...CCCTACTGGCGGAGCTACTGGCAACTGATGGCTGATGAGGCAGGGAGAATCGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR CCA 90 bp GCTCCGCCAGTAGGGGTGGGCCTCAGGAGTTTCCTCCCATTCTCATTGGAATTTAGTGAGGCTCCTGCCTaGGTTAGGTCAGCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: APPVGVGLRSFLPFSLEFSEAPA*VRSAPF
Trigger: GAAGGGAGCTGACCTAACCCAGGCAGGAGCCTCACT...AAATTCCAATGAGAATGGGAGGAAACTCCTGAGGCCCACCCCTACTGGCGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR CCA 90 bp ACTCTTACATTCTTTCTGCCCCTTCCTCTGAGACGCTCCCTGAGCCTTGCACAGGTACACCTGTGCACCTaGCCAAACCGACCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: TLTFFLPLPLRRSLSLAQVHLCT*PNRPPP
Trigger: AGGAGGGGGTCGGTTTGGCCAGGTGCACAGGTGTAC...CTGTGCAAGGCTCAGGGAGCGTCTCAGAGGAAGGGGCAGAAAGAATGTAAGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR TCA 90 bp TCCCTGCCCATCCTGAGCGTGCCTGCTCTTATTACCAAAAGGAAGGGTGCGGGGGATGCCCTGTCTGGCTaGCACACAATATGTTCTCAG +
Preference number: 4 (lower is better)
Translates to: SLPILSVPALITKRKGAGDALSG*HTICSQ
Trigger: CTGAGAACATATTGTGTGTCAGCCAGACAGGGCATC...CCCCGCACCCTTCCTTTTGGTAATAAGAGCAGGCACGCTCAGGATGGGCAGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR GCA 90 bp TGCATATTGATCATATCCGTCTACCTGCTTCCAACTGTCCCTAATGTCCTGCCCCCGTGGTTGGGGGAGTaGTGCCAGACCCTGCCAGAC +
Preference number: 4 (lower is better)
Translates to: CILIISVYLLPTVPNVLPPWLGE*CQTLPD
Trigger: GTCTGGCAGGGTCTGGCAGCACTCCCCCAACCACGG...GGGCAGGACATTAGGGACAGTTGGAAGCAGGTAGACGGATATGATCAATATGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000034133.14
CDS-3UTR GCA 90 bp TGCATATTGATCATATCCGTCTACCTGCTTCCAACTGTCCCTAATGTCCTGCCCCAGGACCTCAGGCCATaGGGCCTGAGCCGTGGTTGG +
Preference number: 4 (lower is better)
Translates to: CILIISVYLLPTVPNVLPQDLRP*GLSRGW
Trigger: CCAACCACGGCTCAGGCCGCATGGCCTGAGGTCCTG...GGGCAGGACATTAGGGACAGTTGGAAGCAGGTAGACGGATATGATCAATATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034133.14
CDS-3UTR GCA 90 bp GCTCCGCCAGTAGGGGTGGGCCTCAGGAGTTTCCTCCCATTCTCATTGGAATTTCCGGGCACGGTTCCTTaGATGATGAAATCAGCCACC +
Preference number: 4 (lower is better)
Translates to: APPVGVGLRSFLPFSLEFPGTVP*MMKSAT
Trigger: GGTGGCTGATTTCATCATGCAAGGAACCGTGCCCGG...AAATTCCAATGAGAATGGGAGGAAACTCCTGAGGCCCACCCCTACTGGCGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034133.14
CDS-3UTR GCA 90 bp ACTCTTACATTCTTTCTGCCCCTTCCTCTGAGACGCTCCCTGAGCCTTGCACAGAGGCTCAGGGCTCACTaGTCCTGGGTCTATGCCTTG +
Preference number: 4 (lower is better)
Translates to: TLTFFLPLPLRRSLSLAQRLRAH*SWVYAL
Trigger: CAAGGCATAGACCCAGGAGCAGTGAGCCCTGAGCCT...CTGTGCAAGGCTCAGGGAGCGTCTCAGAGGAAGGGGCAGAAAGAATGTAAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR GCA 90 bp CTCTTCATATTACCACTTCGTGTTGCCTCAAGAATTCCCAGGCCCAGTGGAACAGCTGCTGGCCTCTGGTaGTGGGCCTGCACAGTGCTG +
Preference number: 4 (lower is better)
Translates to: LFILPLRVASRIPRPSGTAAGLW*WACTVL
Trigger: CAGCACTGTGCAGGCCCAGCACCAGAGGCCAGCAGC...TGTTCCACTGGGCCTGGGAATTCTTGAGGCAACACGAAGTGGTAATATGAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000122452.8
CDS-3UTR CCA 90 bp TCCCTGCCCATCCTGAGCGTGCCTGCTCTTATTACCAAAAGGAAGGGTGCGGGGCTGAACTCAGCCTCATaGCCTCTTCTGAAAGCCAAC +
Preference number: 4 (lower is better)
Translates to: SLPILSVPALITKRKGAGLNSAS*PLLKAN
Trigger: GTTGGCTTTCAGAAGAGGCCATGAGGCTGAGTTCAG...CCCCGCACCCTTCCTTTTGGTAATAAGAGCAGGCACGCTCAGGATGGGCAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR CCA 90 bp AACGATTCTCCCTGCCTCATCAGCCATCAGTTGCCAGTAGCTCCGCCAGTAGGGGTTGCTGCTCCTCTTTaGCAGGGGTGGAAATGGTCT +
Preference number: 4 (lower is better)
Translates to: NDSPCLISHQLPVAPPVGVAAPL*QGWKWS
Trigger: AGACCATTTCCACCCCTGCCAAAGAGGAGCAGCAAC...CCCTACTGGCGGAGCTACTGGCAACTGATGGCTGATGAGGCAGGGAGAATCGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR CCA 90 bp AACGATTCTCCCTGCCTCATCAGCCATCAGTTGCCAGTAGCTCCGCCAGTAGGGCTTGCTGCAGGTCTGTaGTCCCAACAGTCTCATCTC +
Preference number: 4 (lower is better)
Translates to: NDSPCLISHQLPVAPPVGLAAGL*SQQSHL
Trigger: GAGATGAGACTGTTGGGACCACAGACCTGCAGCAAG...CCCTACTGGCGGAGCTACTGGCAACTGATGGCTGATGAGGCAGGGAGAATCGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR CCA 90 bp TCCCTGCCCATCCTGAGCGTGCCTGCTCTTATTACCAAAAGGAAGGGTGCGGGGCATCTAGAACCACAATaGCAGCCTCTGCAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: SLPILSVPALITKRKGAGHLEPQ*QPLQQK
Trigger: CTTCTGCTGCAGAGGCTGCCATTGTGGTTCTAGATG...CCCCGCACCCTTCCTTTTGGTAATAAGAGCAGGCACGCTCAGGATGGGCAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR CCA 90 bp ACTCTTACATTCTTTCTGCCCCTTCCTCTGAGACGCTCCCTGAGCCTTGCACAGTGGAGCCCGAGGCTTTaGCAGGCAGGTGACTTAACC +
Preference number: 4 (lower is better)
Translates to: TLTFFLPLPLRRSLSLAQWSPRL*QAGDLT
Trigger: GGTTAAGTCACCTGCCTGCCAAAGCCTCGGGCTCCA...CTGTGCAAGGCTCAGGGAGCGTCTCAGAGGAAGGGGCAGAAAGAATGTAAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR CCA 90 bp TCCCTGCCCATCCTGAGCGTGCCTGCTCTTATTACCAAAAGGAAGGGTGCGGGGTTCTGCAGCAGTTGTTaGGATCTGAGGCGAACGTTG +
Preference number: 4 (lower is better)
Translates to: SLPILSVPALITKRKGAGFCSSC*DLRRTL
Trigger: CAACGTTCGCCTCAGATCCCAACAACTGCTGCAGAA...CCCCGCACCCTTCCTTTTGGTAATAAGAGCAGGCACGCTCAGGATGGGCAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR TCA 90 bp AACGATTCTCCCTGCCTCATCAGCCATCAGTTGCCAGTAGCTCCGCCAGTAGGGTTGACCACCACCTTGTaGCATCTTGAGGCTAGTGAG +
Preference number: 4 (lower is better)
Translates to: NDSPCLISHQLPVAPPVGLTTTL*HLEASE
Trigger: CTCACTAGCCTCAAGATGTCACAAGGTGGTGGTCAA...CCCTACTGGCGGAGCTACTGGCAACTGATGGCTGATGAGGCAGGGAGAATCGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR GCA 90 bp ACTCTTACATTCTTTCTGCCCCTTCCTCTGAGACGCTCCCTGAGCCTTGCACAGTGCCACCATTGTTGCTaGTCCTCTTTGGCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: TLTFFLPLPLRRSLSLAQCHHCC*SSLAGV
Trigger: CACCCCTGCCAAAGAGGAGCAGCAACAATGGTGGCA...CTGTGCAAGGCTCAGGGAGCGTCTCAGAGGAAGGGGCAGAAAGAATGTAAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR GCA 90 bp AACGATTCTCCCTGCCTCATCAGCCATCAGTTGCCAGTAGCTCCGCCAGTAGGGCCCTATCTCCTCCTCTaGACTCATGCCACCATTGTT +
Preference number: 4 (lower is better)
Translates to: NDSPCLISHQLPVAPPVGPYLLL*THATIV
Trigger: AACAATGGTGGCATGAGTGCAGAGGAGGAGATAGGG...CCCTACTGGCGGAGCTACTGGCAACTGATGGCTGATGAGGCAGGGAGAATCGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR GCA 90 bp TCCCTGCCCATCCTGAGCGTGCCTGCTCTTATTACCAAAAGGAAGGGTGCGGGGTTTGATGATCTTGGCTaGCAGTGCAAGGCCTGTAGA +
Preference number: 4 (lower is better)
Translates to: SLPILSVPALITKRKGAGFDDLG*QCKACR
Trigger: TCTACAGGCCTTGCACTGGCAGCCAAGATCATCAAA...CCCCGCACCCTTCCTTTTGGTAATAAGAGCAGGCACGCTCAGGATGGGCAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR CCA 90 bp GCTCCGCCAGTAGGGGTGGGCCTCAGGAGTTTCCTCCCATTCTCATTGGAATTTGGGAAACAAAGTCCTTaGCTTCCTCCGACAGCCCTT +
Preference number: 4 (lower is better)
Translates to: APPVGVGLRSFLPFSLEFGKQSP*LPPTAL
Trigger: AAGGGCTGTCGGAGGAAGCCAAGGACTTTGTTTCCC...AAATTCCAATGAGAATGGGAGGAAACTCCTGAGGCCCACCCCTACTGGCGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR TCA 90 bp ATGTTTCCGTCAAATTCATCCCCCACTGTTGGACCTAATTCCTCCCTCTTCCATCTGAGGGAGAGGCCCTaGACTCAGCCTCATGGCCTC +
Preference number: 4 (lower is better)
Translates to: MFPSNSSPTVGPNSSLFHLRERP*TQPHGL
Trigger: GAGGCCATGAGGCTGAGTTCAGGGCCTCTCCCTCAG...ATGGAAGAGGGAGGAATTAGGTCCAACAGTGGGGGATGAATTTGACGGAAACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR TCA 90 bp ATGTTTCCGTCAAATTCATCCCCCACTGTTGGACCTAATTCCTCCCTCTTCCATAGTGGTCCTAGGGGCTaGGGGAGAGGCCCTGAACTC +
Preference number: 4 (lower is better)
Translates to: MFPSNSSPTVGPNSSLFHSGPRG*GRGPEL
Trigger: GAGTTCAGGGCCTCTCCCTCAGCCCCTAGGACCACT...ATGGAAGAGGGAGGAATTAGGTCCAACAGTGGGGGATGAATTTGACGGAAACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR TCA 90 bp ACTCTTACATTCTTTCTGCCCCTTCCTCTGAGACGCTCCCTGAGCCTTGCACAGCCACATCCAACTCAGTaGGGTGGTACTTCTCATCCG +
Preference number: 4 (lower is better)
Translates to: TLTFFLPLPLRRSLSLAQPHPTQ*GGTSHP
Trigger: CGGATGAGAAGTACCACCTCACTGAGTTGGATGTGG...CTGTGCAAGGCTCAGGGAGCGTCTCAGAGGAAGGGGCAGAAAGAATGTAAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR TCA 90 bp GCTCCGCCAGTAGGGGTGGGCCTCAGGAGTTTCCTCCCATTCTCATTGGAATTTGATGCCCTGTCTGGCTaGCACACAATATGTTCTCAG +
Preference number: 4 (lower is better)
Translates to: APPVGVGLRSFLPFSLEFDALSG*HTICSQ
Trigger: CTGAGAACATATTGTGTGTCAGCCAGACAGGGCATC...AAATTCCAATGAGAATGGGAGGAAACTCCTGAGGCCCACCCCTACTGGCGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR TCA 90 bp TCCCTGCCCATCCTGAGCGTGCCTGCTCTTATTACCAAAAGGAAGGGTGCGGGGTACAGCTCTTCTCTTTaGCCAGTAACCGGGAAACAA +
Preference number: 4 (lower is better)
Translates to: SLPILSVPALITKRKGAGYSSSL*PVTGKQ
Trigger: TTGTTTCCCGGTTACTGGTCAAAGAGAAGAGCTGTA...CCCCGCACCCTTCCTTTTGGTAATAAGAGCAGGCACGCTCAGGATGGGCAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR CCA 90 bp AACGATTCTCCCTGCCTCATCAGCCATCAGTTGCCAGTAGCTCCGCCAGTAGGGAACAGTCAGGCTTGCTaGATGAGGTTTCTTGACCAC +
Preference number: 4 (lower is better)
Translates to: NDSPCLISHQLPVAPPVGNSQAC*MRFLDH
Trigger: GTGGTCAAGAAACCTCATCCAGCAAGCCTGACTGTT...CCCTACTGGCGGAGCTACTGGCAACTGATGGCTGATGAGGCAGGGAGAATCGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR CCA 90 bp GCTCCGCCAGTAGGGGTGGGCCTCAGGAGTTTCCTCCCATTCTCATTGGAATTTCTGAACTCAGCCTCATaGCCTCTTCTGAAAGCCAAC +
Preference number: 4 (lower is better)
Translates to: APPVGVGLRSFLPFSLEFLNSAS*PLLKAN
Trigger: GTTGGCTTTCAGAAGAGGCCATGAGGCTGAGTTCAG...AAATTCCAATGAGAATGGGAGGAAACTCCTGAGGCCCACCCCTACTGGCGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR CCA 90 bp ACTCTTACATTCTTTCTGCCCCTTCCTCTGAGACGCTCCCTGAGCCTTGCACAGCCTTGTAGCCAAGCTTaGTCCTCTCATAGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: TLTFFLPLPLRRSLSLAQPCSQA*SSHRLS
Trigger: GCTGAGCCTATGAGAGGACCAAGCTTGGCTACAAGG...CTGTGCAAGGCTCAGGGAGCGTCTCAGAGGAAGGGGCAGAAAGAATGTAAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR TCA 90 bp ACTCTTACATTCTTTCTGCCCCTTCCTCTGAGACGCTCCCTGAGCCTTGCACAGAGATCTTGTTCCAGGTaGTCCATGCCTTGGCACACA +
Preference number: 4 (lower is better)
Translates to: TLTFFLPLPLRRSLSLAQRSCSR*SMPWHT
Trigger: TGTGTGCCAAGGCATGGATCACCTGGAACAAGATCT...CTGTGCAAGGCTCAGGGAGCGTCTCAGAGGAAGGGGCAGAAAGAATGTAAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034133.14
CDS-3UTR TCA 90 bp GCTCCGCCAGTAGGGGTGGGCCTCAGGAGTTTCCTCCCATTCTCATTGGAATTTAGTGCATCACCACTGTaGATGTCACTGTCTGGAGTT +
Preference number: 4 (lower is better)
Translates to: APPVGVGLRSFLPFSLEFSASPL*MSLSGV
Trigger: AACTCCAGACAGTGACATTCACAGTGGTGATGCACT...AAATTCCAATGAGAATGGGAGGAAACTCCTGAGGCCCACCCCTACTGGCGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR GCA 90 bp AACGATTCTCCCTGCCTCATCAGCCATCAGTTGCCAGTAGCTCCGCCAGTAGGGGGAGTAGCCATCTCTTaGATATTGATAGGGATCCTG +
Preference number: 4 (lower is better)
Translates to: NDSPCLISHQLPVAPPVGGVAIS*ILIGIL
Trigger: CAGGATCCCTATCAATATGCAAGAGATGGCTACTCC...CCCTACTGGCGGAGCTACTGGCAACTGATGGCTGATGAGGCAGGGAGAATCGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR GCA 90 bp GCTCCGCCAGTAGGGGTGGGCCTCAGGAGTTTCCTCCCATTCTCATTGGAATTTTTTGATGATCTTGGCTaGCAGTGCAAGGCCTGTAGA +
Preference number: 4 (lower is better)
Translates to: APPVGVGLRSFLPFSLEFFDDLG*QCKACR
Trigger: TCTACAGGCCTTGCACTGGCAGCCAAGATCATCAAA...AAATTCCAATGAGAATGGGAGGAAACTCCTGAGGCCCACCCCTACTGGCGGAGC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR CCA 90 bp GCTCCGCCAGTAGGGGTGGGCCTCAGGAGTTTCCTCCCATTCTCATTGGAATTTGCCACCTTGGAATTCTaGAATGTGGACCCTACCAAA +
Preference number: 4 (lower is better)
Translates to: APPVGVGLRSFLPFSLEFATLEF*NVDPTK
Trigger: TTTGGTAGGGTCCACATTCCAGAATTCCAAGGTGGC...AAATTCCAATGAGAATGGGAGGAAACTCCTGAGGCCCACCCCTACTGGCGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034133.14
CDS-3UTR CCA 90 bp CTCTTCATATTACCACTTCGTGTTGCCTCAAGAATTCCCAGGCCCAGTGGAACATGGAGCCCGAGGCTTTaGCAGGCAGGTGACTTAACC +
Preference number: 4 (lower is better)
Translates to: LFILPLRVASRIPRPSGTWSPRL*QAGDLT
Trigger: GGTTAAGTCACCTGCCTGCCAAAGCCTCGGGCTCCA...TGTTCCACTGGGCCTGGGAATTCTTGAGGCAACACGAAGTGGTAATATGAAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR TCA 90 bp CTCCGTAAAATCTTGAGTAATCTCTTCATATTACCACTTCGTGTTGCCTCAAGATCAGGCCATGCGGCCTaGGCCGTGGTTGGGGGAGTG +
Preference number: 4 (lower is better)
Translates to: LRKILSNLFILPLRVASRSGHAA*AVVGGV
Trigger: CACTCCCCCAACCACGGCTCAGGCCGCATGGCCTGA...TCTTGAGGCAACACGAAGTGGTAATATGAAGAGATTACTCAAGATTTTACGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034133.14
CDS-3UTR TCA 90 bp TCTCTTCATATTACCACTTCGTGTTGCCTCAAGAATTCCCAGGCCCAGTGGAACGTCAGGCTTGCTGGATaGGGTTTCTTGACCACCACC +
Preference number: 4 (lower is better)
Translates to: SLHITTSCCLKNSQAQWNVRLAG*GFLTTT
Trigger: GGTGGTGGTCAAGAAACCTCATCCAGCAAGCCTGAC...GTTCCACTGGGCCTGGGAATTCTTGAGGCAACACGAAGTGGTAATATGAAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR TCA 90 bp TCCCTGCCCATCCTGAGCGTGCCTGCTCTTATTACCAAAAGGAAGGGTGCGGGGTTCTTCCATTTACTCTaGGCCATATATTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SLPILSVPALITKRKGAGFFHLL*AIYFCS
Trigger: GCTGCAGAAATATATGGCTCAGAGTAAATGGAAGAA...CCCCGCACCCTTCCTTTTGGTAATAAGAGCAGGCACGCTCAGGATGGGCAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR GCA 90 bp TCTCTTCATATTACCACTTCGTGTTGCCTCAAGAATTCCCAGGCCCAGTGGAACCCAGCAACTTCTGCTTaGTCCTTGTTCTCCTCCGGG +
Preference number: 4 (lower is better)
Translates to: SLHITTSCCLKNSQAQWNPATSA*SLFSSG
Trigger: CCCGGAGGAGAACAAGGAGCAAGCAGAAGTTGCTGG...GTTCCACTGGGCCTGGGAATTCTTGAGGCAACACGAAGTGGTAATATGAAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034133.14
CDS-3UTR GCA 90 bp GCTCCGCCAGTAGGGGTGGGCCTCAGGAGTTTCCTCCCATTCTCATTGGAATTTGGAGTAGCCATCTCTTaGATATTGATAGGGATCCTG +
Preference number: 4 (lower is better)
Translates to: APPVGVGLRSFLPFSLEFGVAIS*ILIGIL
Trigger: CAGGATCCCTATCAATATGCAAGAGATGGCTACTCC...AAATTCCAATGAGAATGGGAGGAAACTCCTGAGGCCCACCCCTACTGGCGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR CCA 90 bp GTCTTAACGACATCTCGTAGGACTCGTCTTCATCTACCAACTCTTACATTCTTTTCTGATGCCCGCTGCTaGCCTCTGGTGCTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: VLTTSRRTRLHLPTLTFFSDARC*PLVLGL
Trigger: CAGGCCCAGCACCAGAGGCCAGCAGCGGGCATCAGA...AAAGAATGTAAGAGTTGGTAGATGAAGACGAGTCCTACGAGATGTCGTTAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000122452.8
CDS-3UTR CCA 90 bp GCCAATCTCCGTAAAATCTTGAGTAATCTCTTCATATTACCACTTCGTGTTGCCAGAGGGCTTCGAGCCTaGCACCATGCTGGGCACCCT +
Preference number: 4 (lower is better)
Translates to: ANLRKILSNLFILPLRVARGLRA*HHAGHP
Trigger: AGGGTGCCCAGCATGGTGCCAGGCTCGAAGCCCTCT...GGCAACACGAAGTGGTAATATGAAGAGATTACTCAAGATTTTACGGAGATTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034133.14
CDS-3UTR CCA 90 bp TCTCTTCATATTACCACTTCGTGTTGCCTCAAGAATTCCCAGGCCCAGTGGAACTGGATTCTGCTTCTGTaGGTAGGGGTACTTGGCCTG +
Preference number: 4 (lower is better)
Translates to: SLHITTSCCLKNSQAQWNWILLL*VGVLGL
Trigger: CAGGCCAAGTACCCCTACCCACAGAAGCAGAATCCA...GTTCCACTGGGCCTGGGAATTCTTGAGGCAACACGAAGTGGTAATATGAAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR CCA 90 bp CTCTTCATATTACCACTTCGTGTTGCCTCAAGAATTCCCAGGCCCAGTGGAACAGTTGCTGCTCCTCTTTaGCAGGGGTGGAAATGGTCT +
Preference number: 4 (lower is better)
Translates to: LFILPLRVASRIPRPSGTVAAPL*QGWKWS
Trigger: AGACCATTTCCACCCCTGCCAAAGAGGAGCAGCAAC...TGTTCCACTGGGCCTGGGAATTCTTGAGGCAACACGAAGTGGTAATATGAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR TCA 90 bp TCTCTTCATATTACCACTTCGTGTTGCCTCAAGAATTCCCAGGCCCAGTGGAACTTGACCACCACCTTGTaGCATCTTGAGGCTAGTGAG +
Preference number: 4 (lower is better)
Translates to: SLHITTSCCLKNSQAQWNLTTTL*HLEASE
Trigger: CTCACTAGCCTCAAGATGTCACAAGGTGGTGGTCAA...GTTCCACTGGGCCTGGGAATTCTTGAGGCAACACGAAGTGGTAATATGAAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR TCA 90 bp ACTCTTACATTCTTTCTGCCCCTTCCTCTGAGACGCTCCCTGAGCCTTGCACAGTCAATGATCTTAATTTaGTGCCCTGTCTGGCTGACA +
Preference number: 4 (lower is better)
Translates to: TLTFFLPLPLRRSLSLAQSMILI*CPVWLT
Trigger: TGTCAGCCAGACAGGGCATCAAATTAAGATCATTGA...CTGTGCAAGGCTCAGGGAGCGTCTCAGAGGAAGGGGCAGAAAGAATGTAAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR TCA 90 bp TGGGCCTCAGGAGTTTCCTCCCATTCTCATTGGAATTTTGACCAACTTGATCTTTATCTGGGTGTAATCTaGTGCCCGCTGCTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: WASGVSSHSHWNFDQLDLYLGVI*CPLLAS
Trigger: AGAGGCCAGCAGCGGGCATCAGATTACACCCAGATA...AAGATCAAGTTGGTCAAAATTCCAATGAGAATGGGAGGAAACTCCTGAGGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000122452.8
CDS-3UTR GCA 90 bp CTCTTCATATTACCACTTCGTGTTGCCTCAAGAATTCCCAGGCCCAGTGGAACACCTTGGCACACACACTaGAGCTTCTCTGTGACATCT +
Preference number: 4 (lower is better)
Translates to: LFILPLRVASRIPRPSGTPWHTH*SFSVTS
Trigger: AGATGTCACAGAGAAGCTGCAGTGTGTGTGCCAAGG...TGTTCCACTGGGCCTGGGAATTCTTGAGGCAACACGAAGTGGTAATATGAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034133.14
CDS-3UTR GCA 90 bp GTCTTAACGACATCTCGTAGGACTCGTCTTCATCTACCAACTCTTACATTCTTTTGGTTGGGGGAGTGCTaGCAGACCCTGCCAGACTCA +
Preference number: 4 (lower is better)
Translates to: VLTTSRRTRLHLPTLTFFWLGEC*QTLPDS
Trigger: TGAGTCTGGCAGGGTCTGGCAGCACTCCCCCAACCA...AAAGAATGTAAGAGTTGGTAGATGAAGACGAGTCCTACGAGATGTCGTTAAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034133.14
CDS-3UTR GCA 90 bp TCTCTTCATATTACCACTTCGTGTTGCCTCAAGAATTCCCAGGCCCAGTGGAACACACCCTCACAGATCTaGCTCGTGAACAAGACCACA +
Preference number: 4 (lower is better)
Translates to: SLHITTSCCLKNSQAQWNTPSQI*LVNKTT
Trigger: TGTGGTCTTGTTCACGAGGCAGATCTGTGAGGGTGT...GTTCCACTGGGCCTGGGAATTCTTGAGGCAACACGAAGTGGTAATATGAAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR CCA 90 bp TCTCTTCATATTACCACTTCGTGTTGCCTCAAGAATTCCCAGGCCCAGTGGAACCTGTCTCAGGAAGCCTaGATTCTGCTTCTGTGGGTA +
Preference number: 4 (lower is better)
Translates to: SLHITTSCCLKNSQAQWNLSQEA*ILLLWV
Trigger: TACCCACAGAAGCAGAATCCAGGCTTCCTGAGACAG...GTTCCACTGGGCCTGGGAATTCTTGAGGCAACACGAAGTGGTAATATGAAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR CCA 90 bp TGGGCCTCAGGAGTTTCCTCCCATTCTCATTGGAATTTTGACCAACTTGATCTTCGGACAATTCCAGGGTaGCTCCAGTGTTCTCACTGG +
Preference number: 4 (lower is better)
Translates to: WASGVSSHSHWNFDQLDLRTIPG*LQCSHW
Trigger: CCAGTGAGAACACTGGAGCCACCCTGGAATTGTCCG...AAGATCAAGTTGGTCAAAATTCCAATGAGAATGGGAGGAAACTCCTGAGGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR CCA 90 bp ATGTTTCCGTCAAATTCATCCCCCACTGTTGGACCTAATTCCTCCCTCTTCCATCTTGCTGCAGGTCTGTaGTCCCAACAGTCTCATCTC +
Preference number: 4 (lower is better)
Translates to: MFPSNSSPTVGPNSSLFHLAAGL*SQQSHL
Trigger: GAGATGAGACTGTTGGGACCACAGACCTGCAGCAAG...ATGGAAGAGGGAGGAATTAGGTCCAACAGTGGGGGATGAATTTGACGGAAACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR CCA 90 bp GCCAATCTCCGTAAAATCTTGAGTAATCTCTTCATATTACCACTTCGTGTTGCCAGCTTCAGTTCTTCCTaGGCCCTGGGCTGCGTGGTC +
Preference number: 4 (lower is better)
Translates to: ANLRKILSNLFILPLRVASFSSS*ALGCVV
Trigger: GACCACGCAGCCCAGGGCCCAGGAAGAACTGAAGCT...GGCAACACGAAGTGGTAATATGAAGAGATTACTCAAGATTTTACGGAGATTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR TCA 90 bp TGGGCCTCAGGAGTTTCCTCCCATTCTCATTGGAATTTTGACCAACTTGATCTTCCTCATGGCCTCTTCTaGAAGCCAACAGTCAGGCTT +
Preference number: 4 (lower is better)
Translates to: WASGVSSHSHWNFDQLDLPHGLF*KPTVRL
Trigger: AAGCCTGACTGTTGGCTTTCAGAAGAGGCCATGAGG...AAGATCAAGTTGGTCAAAATTCCAATGAGAATGGGAGGAAACTCCTGAGGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR TCA 90 bp TTCCATACCTCACTCCCTACTGGCTTCTTTAATCATGACAAGTTTAGAATTCAACTGAGGGAGAGGCCCTaGACTCAGCCTCATGGCCTC +
Preference number: 4 (lower is better)
Translates to: FHTSLPTGFFNHDKFRIQLRERP*TQPHGL
Trigger: GAGGCCATGAGGCTGAGTTCAGGGCCTCTCCCTCAG...TTGAATTCTAAACTTGTCATGATTAAAGAAGCCAGTAGGGAGTGAGGTATGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR TCA 90 bp CTCTTCATATTACCACTTCGTGTTGCCTCAAGAATTCCCAGGCCCAGTGGAACAAGTGCATCACCACTGTaGATGTCACTGTCTGGAGTT +
Preference number: 4 (lower is better)
Translates to: LFILPLRVASRIPRPSGTSASPL*MSLSGV
Trigger: AACTCCAGACAGTGACATTCACAGTGGTGATGCACT...TGTTCCACTGGGCCTGGGAATTCTTGAGGCAACACGAAGTGGTAATATGAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR TCA 90 bp TGGGCCTCAGGAGTTTCCTCCCATTCTCATTGGAATTTTGACCAACTTGATCTTGCTTTGGCAGGCAGGTaGCTTAACCACTCGTGTTTC +
Preference number: 4 (lower is better)
Translates to: WASGVSSHSHWNFDQLDLALAGR*LNHSCF
Trigger: GAAACACGAGTGGTTAAGTCACCTGCCTGCCAAAGC...AAGATCAAGTTGGTCAAAATTCCAATGAGAATGGGAGGAAACTCCTGAGGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR GCA 90 bp GTCTTAACGACATCTCGTAGGACTCGTCTTCATCTACCAACTCTTACATTCTTTCTGCTCCTGGGTCTATaGCTTGCTGCAGGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: VLTTSRRTRLHLPTLTFFLLLGL*LAAGLW
Trigger: CCACAGACCTGCAGCAAGGCATAGACCCAGGAGCAG...AAAGAATGTAAGAGTTGGTAGATGAAGACGAGTCCTACGAGATGTCGTTAAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR CCA 90 bp TTCTTTAAGAATTTTATACAATGTTTCCGTCAAATTCATCCCCCACTGTTGGACAATGCTGGCAGACCCTaGGGGGCCAGACCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: FFKNFIQCFRQIHPPLLDNAGRP*GARPSG
Trigger: CCCAGAGGGTCTGGCCCCCCAGGGTCTGCCAGCATT...GTCCAACAGTGGGGGATGAATTTGACGGAAACATTGTATAAAATTCTTAAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000034133.14
CDS-3UTR CCA 90 bp TCTTCCATACCTCACTCCCTACTGGCTTCTTTAATCATGACAAGTTTAGAATTCGTACACCTGTGCACCTaGCCAAACCGACCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: SSIPHSLLASLIMTSLEFVHLCT*PNRPPP
Trigger: AGGAGGGGGTCGGTTTGGCCAGGTGCACAGGTGTAC...GAATTCTAAACTTGTCATGATTAAAGAAGCCAGTAGGGAGTGAGGTATGGAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR TCA 90 bp ACTCTTACATTCTTTCTGCCCCTTCCTCTGAGACGCTCCCTGAGCCTTGCACAGCATGTCTGTTGGAAATaGCACAAACTCATAGTTAAC +
Preference number: 4 (lower is better)
Translates to: TLTFFLPLPLRRSLSLAQHVCWK*HKLIVN
Trigger: GTTAACTATGAGTTTGTGTCATTTCCAACAGACATG...CTGTGCAAGGCTCAGGGAGCGTCTCAGAGGAAGGGGCAGAAAGAATGTAAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR TCA 90 bp TCTCTTCATATTACCACTTCGTGTTGCCTCAAGAATTCCCAGGCCCAGTGGAACTACAGCTCTTCTCTTTaGCCAGTAACCGGGAAACAA +
Preference number: 4 (lower is better)
Translates to: SLHITTSCCLKNSQAQWNYSSSL*PVTGKQ
Trigger: TTGTTTCCCGGTTACTGGTCAAAGAGAAGAGCTGTA...GTTCCACTGGGCCTGGGAATTCTTGAGGCAACACGAAGTGGTAATATGAAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR CCA 90 bp CTCCGTAAAATCTTGAGTAATCTCTTCATATTACCACTTCGTGTTGCCTCAAGAAGTGAGGCTCCTGCCTaGGTTAGGTCAGCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: LRKILSNLFILPLRVASRSEAPA*VRSAPF
Trigger: GAAGGGAGCTGACCTAACCCAGGCAGGAGCCTCACT...TCTTGAGGCAACACGAAGTGGTAATATGAAGAGATTACTCAAGATTTTACGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR CCA 90 bp GCCAATCTCCGTAAAATCTTGAGTAATCTCTTCATATTACCACTTCGTGTTGCCCTCCAGTGTTCTCACTaGCTGTCTCAGGAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: ANLRKILSNLFILPLRVALQCSH*LSQEAW
Trigger: CCAGGCTTCCTGAGACAGCCAGTGAGAACACTGGAG...GGCAACACGAAGTGGTAATATGAAGAGATTACTCAAGATTTTACGGAGATTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR CCA 90 bp GTCTTAACGACATCTCGTAGGACTCGTCTTCATCTACCAACTCTTACATTCTTTCACAGTCCCAAGGCCTaGAGCTTCTGCAGAGCCAAT +
Preference number: 4 (lower is better)
Translates to: VLTTSRRTRLHLPTLTFFHSPKA*SFCRAN
Trigger: ATTGGCTCTGCAGAAGCTCCAGGCCTTGGGACTGTG...AAAGAATGTAAGAGTTGGTAGATGAAGACGAGTCCTACGAGATGTCGTTAAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR CCA 90 bp TGCATATTGATCATATCCGTCTACCTGCTTCCAACTGTCCCTAATGTCCTGCCCTTTACGTGGCTGAGCTaGTTCATGATGTTGACCTCA +
Preference number: 4 (lower is better)
Translates to: CILIISVYLLPTVPNVLPFTWLS*FMMLTS
Trigger: TGAGGTCAACATCATGAACCAGCTCAGCCACGTAAA...GGGCAGGACATTAGGGACAGTTGGAAGCAGGTAGACGGATATGATCAATATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034133.14
CDS-3UTR TCA 90 bp CTCCGTAAAATCTTGAGTAATCTCTTCATATTACCACTTCGTGTTGCCTCAAGAGTCAGGCTTGCTGGATaGGGTTTCTTGACCACCACC +
Preference number: 4 (lower is better)
Translates to: LRKILSNLFILPLRVASRVRLAG*GFLTTT
Trigger: GGTGGTGGTCAAGAAACCTCATCCAGCAAGCCTGAC...TCTTGAGGCAACACGAAGTGGTAATATGAAGAGATTACTCAAGATTTTACGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR TCA 90 bp GCCAATCTCCGTAAAATCTTGAGTAATCTCTTCATATTACCACTTCGTGTTGCCATTTCCGTAGCCTGTTaGCTGCAGTCACCACGTGGA +
Preference number: 4 (lower is better)
Translates to: ANLRKILSNLFILPLRVAISVAC*LQSPRG
Trigger: TCCACGTGGTGACTGCAGTCAACAGGCTACGGAAAT...GGCAACACGAAGTGGTAATATGAAGAGATTACTCAAGATTTTACGGAGATTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR GCA 90 bp TCTTCCATACCTCACTCCCTACTGGCTTCTTTAATCATGACAAGTTTAGAATTCAGAACTTCAACTCCCTaGCTCAGTGAGGCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: SSIPHSLLASLIMTSLEFRTSTP*LSEAPA
Trigger: GGCAGGAGCCTCACTGAGGCAGGGAGTTGAAGTTCT...GAATTCTAAACTTGTCATGATTAAAGAAGCCAGTAGGGAGTGAGGTATGGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR GCA 90 bp TCTTCCATACCTCACTCCCTACTGGCTTCTTTAATCATGACAAGTTTAGAATTCTGCCACCATTGTTGCTaGTCCTCTTTGGCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: SSIPHSLLASLIMTSLEFCHHCC*SSLAGV
Trigger: CACCCCTGCCAAAGAGGAGCAGCAACAATGGTGGCA...GAATTCTAAACTTGTCATGATTAAAGAAGCCAGTAGGGAGTGAGGTATGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR CCA 90 bp GTCTTAACGACATCTCGTAGGACTCGTCTTCATCTACCAACTCTTACATTCTTTTGGATTCTGCTTCTGTaGGTAGGGGTACTTGGCCTG +
Preference number: 4 (lower is better)
Translates to: VLTTSRRTRLHLPTLTFFWILLL*VGVLGL
Trigger: CAGGCCAAGTACCCCTACCCACAGAAGCAGAATCCA...AAAGAATGTAAGAGTTGGTAGATGAAGACGAGTCCTACGAGATGTCGTTAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR CCA 90 bp CTCCGTAAAATCTTGAGTAATCTCTTCATATTACCACTTCGTGTTGCCTCAAGACGGACAATTCCAGGGTaGCTCCAGTGTTCTCACTGG +
Preference number: 4 (lower is better)
Translates to: LRKILSNLFILPLRVASRRTIPG*LQCSHW
Trigger: CCAGTGAGAACACTGGAGCCACCCTGGAATTGTCCG...TCTTGAGGCAACACGAAGTGGTAATATGAAGAGATTACTCAAGATTTTACGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR CCA 90 bp GTCTTAACGACATCTCGTAGGACTCGTCTTCATCTACCAACTCTTACATTCTTTCCTTGTAGCCAAGCTTaGTCCTCTCATAGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: VLTTSRRTRLHLPTLTFFPCSQA*SSHRLS
Trigger: GCTGAGCCTATGAGAGGACCAAGCTTGGCTACAAGG...AAAGAATGTAAGAGTTGGTAGATGAAGACGAGTCCTACGAGATGTCGTTAAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR CCA 90 bp GTCTTAACGACATCTCGTAGGACTCGTCTTCATCTACCAACTCTTACATTCTTTGTTTCAGGCACTGTGTaGCGCTCATCCTACAGCTCT +
Preference number: 4 (lower is better)
Translates to: VLTTSRRTRLHLPTLTFFVSGTV*RSSYSS
Trigger: AGAGCTGTAGGATGAGCGCCACACAGTGCCTGAAAC...AAAGAATGTAAGAGTTGGTAGATGAAGACGAGTCCTACGAGATGTCGTTAAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR TCA 90 bp GCCAATCTCCGTAAAATCTTGAGTAATCTCTTCATATTACCACTTCGTGTTGCCCTGGATGAGGTTTCTTaGCCACCACCTTGTGACATC +
Preference number: 4 (lower is better)
Translates to: ANLRKILSNLFILPLRVALDEVS*PPPCDI
Trigger: GATGTCACAAGGTGGTGGTCAAGAAACCTCATCCAG...GGCAACACGAAGTGGTAATATGAAGAGATTACTCAAGATTTTACGGAGATTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR TCA 90 bp TCTTCCATACCTCACTCCCTACTGGCTTCTTTAATCATGACAAGTTTAGAATTCGGTACTTCTCATCCGTaGTCCGGTCAAAGAGTTCGC +
Preference number: 4 (lower is better)
Translates to: SSIPHSLLASLIMTSLEFGTSHP*SGQRVR
Trigger: GCGAACTCTTTGACCGGATCACGGATGAGAAGTACC...GAATTCTAAACTTGTCATGATTAAAGAAGCCAGTAGGGAGTGAGGTATGGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR TCA 90 bp CTCCGTAAAATCTTGAGTAATCTCTTCATATTACCACTTCGTGTTGCCTCAAGAGCTTTGGCAGGCAGGTaGCTTAACCACTCGTGTTTC +
Preference number: 4 (lower is better)
Translates to: LRKILSNLFILPLRVASRALAGR*LNHSCF
Trigger: GAAACACGAGTGGTTAAGTCACCTGCCTGCCAAAGC...TCTTGAGGCAACACGAAGTGGTAATATGAAGAGATTACTCAAGATTTTACGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR TCA 90 bp CTCTTCATATTACCACTTCGTGTTGCCTCAAGAATTCCCAGGCCCAGTGGAACATTCTTCCATTTACTCTaGGCCATATATTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LFILPLRVASRIPRPSGTFFHLL*AIYFCS
Trigger: GCTGCAGAAATATATGGCTCAGAGTAAATGGAAGAA...TGTTCCACTGGGCCTGGGAATTCTTGAGGCAACACGAAGTGGTAATATGAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR GCA 90 bp GCCAATCTCCGTAAAATCTTGAGTAATCTCTTCATATTACCACTTCGTGTTGCCCCCTATCTCCTCCTCTaGACTCATGCCACCATTGTT +
Preference number: 4 (lower is better)
Translates to: ANLRKILSNLFILPLRVAPYLLL*THATIV
Trigger: AACAATGGTGGCATGAGTGCAGAGGAGGAGATAGGG...GGCAACACGAAGTGGTAATATGAAGAGATTACTCAAGATTTTACGGAGATTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR CCA 90 bp TGGGCCTCAGGAGTTTCCTCCCATTCTCATTGGAATTTTGACCAACTTGATCTTTTTACGTGGCTGAGCTaGTTCATGATGTTGACCTCA +
Preference number: 4 (lower is better)
Translates to: WASGVSSHSHWNFDQLDLFTWLS*FMMLTS
Trigger: TGAGGTCAACATCATGAACCAGCTCAGCCACGTAAA...AAGATCAAGTTGGTCAAAATTCCAATGAGAATGGGAGGAAACTCCTGAGGCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR TCA 90 bp TCTTTAAGAATTTTATACAATGTTTCCGTCAAATTCATCCCCCACTGTTGGACCCCTCATGGCCTCTTCTaGAAGCCAACAGTCAGGCTT +
Preference number: 4 (lower is better)
Translates to: SLRILYNVSVKFIPHCWTPHGLF*KPTVRL
Trigger: AAGCCTGACTGTTGGCTTTCAGAAGAGGCCATGAGG...GGTCCAACAGTGGGGGATGAATTTGACGGAAACATTGTATAAAATTCTTAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR TCA 90 bp TTCCATACCTCACTCCCTACTGGCTTCTTTAATCATGACAAGTTTAGAATTCAAGGTACTTCTCATCCGTaGTCCGGTCAAAGAGTTCGC +
Preference number: 4 (lower is better)
Translates to: FHTSLPTGFFNHDKFRIQGTSHP*SGQRVR
Trigger: GCGAACTCTTTGACCGGATCACGGATGAGAAGTACC...TTGAATTCTAAACTTGTCATGATTAAAGAAGCCAGTAGGGAGTGAGGTATGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR TCA 90 bp TCTCTTCATATTACCACTTCGTGTTGCCTCAAGAATTCCCAGGCCCAGTGGAACCATGTCTGTTGGAAATaGCACAAACTCATAGTTAAC +
Preference number: 4 (lower is better)
Translates to: SLHITTSCCLKNSQAQWNHVCWK*HKLIVN
Trigger: GTTAACTATGAGTTTGTGTCATTTCCAACAGACATG...GTTCCACTGGGCCTGGGAATTCTTGAGGCAACACGAAGTGGTAATATGAAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR TCA 90 bp TTCCATACCTCACTCCCTACTGGCTTCTTTAATCATGACAAGTTTAGAATTCAAATTTCCGTAGCCTGTTaGCTGCAGTCACCACGTGGA +
Preference number: 4 (lower is better)
Translates to: FHTSLPTGFFNHDKFRIQISVAC*LQSPRG
Trigger: TCCACGTGGTGACTGCAGTCAACAGGCTACGGAAAT...TTGAATTCTAAACTTGTCATGATTAAAGAAGCCAGTAGGGAGTGAGGTATGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR GCA 90 bp TTCCATACCTCACTCCCTACTGGCTTCTTTAATCATGACAAGTTTAGAATTCAAGTTCCAGGTGATCCATaGCTTGGCACACACACTGCA +
Preference number: 4 (lower is better)
Translates to: FHTSLPTGFFNHDKFRIQVPGDP*LGTHTA
Trigger: TGCAGTGTGTGTGCCAAGGCATGGATCACCTGGAAC...TTGAATTCTAAACTTGTCATGATTAAAGAAGCCAGTAGGGAGTGAGGTATGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034133.14
CDS-3UTR GCA 90 bp TCTTCCATACCTCACTCCCTACTGGCTTCTTTAATCATGACAAGTTTAGAATTCCACTCCAGCAACTTCTaGTTGCTCCTTGTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: SSIPHSLLASLIMTSLEFHSSNF*LLLVLL
Trigger: GAGGAGAACAAGGAGCAAGCAGAAGTTGCTGGAGTG...GAATTCTAAACTTGTCATGATTAAAGAAGCCAGTAGGGAGTGAGGTATGGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034133.14
CDS-3UTR GCA 90 bp CTCCGTAAAATCTTGAGTAATCTCTTCATATTACCACTTCGTGTTGCCTCAAGAACACCCTCACAGATCTaGCTCGTGAACAAGACCACA +
Preference number: 4 (lower is better)
Translates to: LRKILSNLFILPLRVASRTPSQI*LVNKTT
Trigger: TGTGGTCTTGTTCACGAGGCAGATCTGTGAGGGTGT...TCTTGAGGCAACACGAAGTGGTAATATGAAGAGATTACTCAAGATTTTACGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR CCA 90 bp TCTTTAAGAATTTTATACAATGTTTCCGTCAAATTCATCCCCCACTGTTGGACCGGGAAACAAAGTCCTTaGCTTCCTCCGACAGCCCTT +
Preference number: 4 (lower is better)
Translates to: SLRILYNVSVKFIPHCWTGKQSP*LPPTAL
Trigger: AAGGGCTGTCGGAGGAAGCCAAGGACTTTGTTTCCC...GGTCCAACAGTGGGGGATGAATTTGACGGAAACATTGTATAAAATTCTTAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR TCA 90 bp TTCTTTAAGAATTTTATACAATGTTTCCGTCAAATTCATCCCCCACTGTTGGACCCACATCCAACTCAGTaGGGTGGTACTTCTCATCCG +
Preference number: 4 (lower is better)
Translates to: FFKNFIQCFRQIHPPLLDPHPTQ*GGTSHP
Trigger: CGGATGAGAAGTACCACCTCACTGAGTTGGATGTGG...GTCCAACAGTGGGGGATGAATTTGACGGAAACATTGTATAAAATTCTTAAAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR CCA 90 bp TCTTCCATACCTCACTCCCTACTGGCTTCTTTAATCATGACAAGTTTAGAATTCCCTGTAGTCAGTACATaGTTTGGCTTCACTCCAGCA +
Preference number: 4 (lower is better)
Translates to: SSIPHSLLASLIMTSLEFPVVST*FGFTPA
Trigger: TGCTGGAGTGAAGCCAAACCATGTACTGACTACAGG...GAATTCTAAACTTGTCATGATTAAAGAAGCCAGTAGGGAGTGAGGTATGGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR CCA 90 bp TCTTTAAGAATTTTATACAATGTTTCCGTCAAATTCATCCCCCACTGTTGGACCCATCTAGAACCACAATaGCAGCCTCTGCAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: SLRILYNVSVKFIPHCWTHLEPQ*QPLQQK
Trigger: CTTCTGCTGCAGAGGCTGCCATTGTGGTTCTAGATG...GGTCCAACAGTGGGGGATGAATTTGACGGAAACATTGTATAAAATTCTTAAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR CCA 90 bp GTCTTAACGACATCTCGTAGGACTCGTCTTCATCTACCAACTCTTACATTCTTTTGGATCAAGTTTACGTaGCTGAGCTGGTTCATGATG +
Preference number: 4 (lower is better)
Translates to: VLTTSRRTRLHLPTLTFFWIKFT*LSWFMM
Trigger: CATCATGAACCAGCTCAGCCACGTAAACTTGATCCA...AAAGAATGTAAGAGTTGGTAGATGAAGACGAGTCCTACGAGATGTCGTTAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR CCA 90 bp TCTTCCATACCTCACTCCCTACTGGCTTCTTTAATCATGACAAGTTTAGAATTCTCCAACTCAGTGAGGTaGTACTTCTCATCCGTGATC +
Preference number: 4 (lower is better)
Translates to: SSIPHSLLASLIMTSLEFSNSVR*YFSSVI
Trigger: GATCACGGATGAGAAGTACCACCTCACTGAGTTGGA...GAATTCTAAACTTGTCATGATTAAAGAAGCCAGTAGGGAGTGAGGTATGGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR CCA 90 bp TTCTTTAAGAATTTTATACAATGTTTCCGTCAAATTCATCCCCCACTGTTGGACGTTTCAGGCACTGTGTaGCGCTCATCCTACAGCTCT +
Preference number: 4 (lower is better)
Translates to: FFKNFIQCFRQIHPPLLDVSGTV*RSSYSS
Trigger: AGAGCTGTAGGATGAGCGCCACACAGTGCCTGAAAC...GTCCAACAGTGGGGGATGAATTTGACGGAAACATTGTATAAAATTCTTAAAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR CCA 90 bp TCTTTAAGAATTTTATACAATGTTTCCGTCAAATTCATCCCCCACTGTTGGACCTTCTGCAGCAGTTGTTaGGATCTGAGGCGAACGTTG +
Preference number: 4 (lower is better)
Translates to: SLRILYNVSVKFIPHCWTFCSSC*DLRRTL
Trigger: CAACGTTCGCCTCAGATCCCAACAACTGCTGCAGAA...GGTCCAACAGTGGGGGATGAATTTGACGGAAACATTGTATAAAATTCTTAAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR TCA 90 bp GTCTTAACGACATCTCGTAGGACTCGTCTTCATCTACCAACTCTTACATTCTTTTCAATGATCTTAATTTaGTGCCCTGTCTGGCTGACA +
Preference number: 4 (lower is better)
Translates to: VLTTSRRTRLHLPTLTFFSMILI*CPVWLT
Trigger: TGTCAGCCAGACAGGGCATCAAATTAAGATCATTGA...AAAGAATGTAAGAGTTGGTAGATGAAGACGAGTCCTACGAGATGTCGTTAAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR GCA 90 bp TTCCATACCTCACTCCCTACTGGCTTCTTTAATCATGACAAGTTTAGAATTCAACACTCCAGCAACTTCTaGTTGCTCCTTGTTCGCAAA +
Preference number: 4 (lower is better)
Translates to: FHTSLPTGFFNHDKFRIQHSSNF*LLLVRK
Trigger: TTTGCGAACAAGGAGCAAGCAGAAGTTGCTGGAGTG...TTGAATTCTAAACTTGTCATGATTAAAGAAGCCAGTAGGGAGTGAGGTATGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000122452.8
CDS-3UTR CCA 90 bp GTCTTAACGACATCTCGTAGGACTCGTCTTCATCTACCAACTCTTACATTCTTTTCTGTGACATCTTCTTaGAAATGCAAGAGTCTGTCG +
Preference number: 4 (lower is better)
Translates to: VLTTSRRTRLHLPTLTFFSVTSS*KCKSLS
Trigger: CGACAGACTCTTGCATTTCCAAGAAGATGTCACAGA...AAAGAATGTAAGAGTTGGTAGATGAAGACGAGTCCTACGAGATGTCGTTAAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034133.14
CDS-3UTR CCA 90 bp TCTTCCATACCTCACTCCCTACTGGCTTCTTTAATCATGACAAGTTTAGAATTCAGTCAGTACATGGTTTaGCTTCACTCCAGCAACTTC +
Preference number: 4 (lower is better)
Translates to: SSIPHSLLASLIMTSLEFSQYMV*LHSSNF
Trigger: GAAGTTGCTGGAGTGAAGCCAAACCATGTACTGACT...GAATTCTAAACTTGTCATGATTAAAGAAGCCAGTAGGGAGTGAGGTATGGAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR CCA 90 bp TTCCATACCTCACTCCCTACTGGCTTCTTTAATCATGACAAGTTTAGAATTCAACCTGTAGTCAGTACATaGTTTGGCTTCACTCCAGCA +
Preference number: 4 (lower is better)
Translates to: FHTSLPTGFFNHDKFRIQPVVST*FGFTPA
Trigger: TGCTGGAGTGAAGCCAAACCATGTACTGACTACAGG...TTGAATTCTAAACTTGTCATGATTAAAGAAGCCAGTAGGGAGTGAGGTATGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR CCA 90 bp TCTTTAAGAATTTTATACAATGTTTCCGTCAAATTCATCCCCCACTGTTGGACCAACAGTCAGGCTTGCTaGATGAGGTTTCTTGACCAC +
Preference number: 4 (lower is better)
Translates to: SLRILYNVSVKFIPHCWTNSQAC*MRFLDH
Trigger: GTGGTCAAGAAACCTCATCCAGCAAGCCTGACTGTT...GGTCCAACAGTGGGGGATGAATTTGACGGAAACATTGTATAAAATTCTTAAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR CCA 90 bp CTCCGTAAAATCTTGAGTAATCTCTTCATATTACCACTTCGTGTTGCCTCAAGATGGATCAAGTTTACGTaGCTGAGCTGGTTCATGATG +
Preference number: 4 (lower is better)
Translates to: LRKILSNLFILPLRVASRWIKFT*LSWFMM
Trigger: CATCATGAACCAGCTCAGCCACGTAAACTTGATCCA...TCTTGAGGCAACACGAAGTGGTAATATGAAGAGATTACTCAAGATTTTACGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR CCA 90 bp TTCCATACCTCACTCCCTACTGGCTTCTTTAATCATGACAAGTTTAGAATTCAATCCAACTCAGTGAGGTaGTACTTCTCATCCGTGATC +
Preference number: 4 (lower is better)
Translates to: FHTSLPTGFFNHDKFRIQSNSVR*YFSSVI
Trigger: GATCACGGATGAGAAGTACCACCTCACTGAGTTGGA...TTGAATTCTAAACTTGTCATGATTAAAGAAGCCAGTAGGGAGTGAGGTATGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR GCA 90 bp CTCCGTAAAATCTTGAGTAATCTCTTCATATTACCACTTCGTGTTGCCTCAAGAACATCTTCTTGGAAATaGAAGAGTCTGTCGACCTTC +
Preference number: 4 (lower is better)
Translates to: LRKILSNLFILPLRVASRTSSWK*KSLSTF
Trigger: GAAGGTCGACAGACTCTTGCATTTCCAAGAAGATGT...TCTTGAGGCAACACGAAGTGGTAATATGAAGAGATTACTCAAGATTTTACGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034133.14
CDS-3UTR CCA 90 bp TTCTTTAAGAATTTTATACAATGTTTCCGTCAAATTCATCCCCCACTGTTGGACATAGTTAACAACTTCTaGGGCCAGGAACTCCGGAGT +
Preference number: 4 (lower is better)
Translates to: FFKNFIQCFRQIHPPLLDIVNNF*GQELRS
Trigger: ACTCCGGAGTTCCTGGCCCCAGAAGTTGTTAACTAT...GTCCAACAGTGGGGGATGAATTTGACGGAAACATTGTATAAAATTCTTAAAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR CCA 90 bp TTCCATACCTCACTCCCTACTGGCTTCTTTAATCATGACAAGTTTAGAATTCAAACTGCAGTCACCACGTaGAAATGTTTCTTCCATTTA +
Preference number: 4 (lower is better)
Translates to: FHTSLPTGFFNHDKFRIQTAVTT*KCFFHL
Trigger: TAAATGGAAGAAACATTTCCACGTGGTGACTGCAGT...TTGAATTCTAAACTTGTCATGATTAAAGAAGCCAGTAGGGAGTGAGGTATGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR CCA 90 bp TTCTTTAAGAATTTTATACAATGTTTCCGTCAAATTCATCCCCCACTGTTGGACACTGCAGTCACCACGTaGAAATGTTTCTTCCATTTA +
Preference number: 4 (lower is better)
Translates to: FFKNFIQCFRQIHPPLLDTAVTT*KCFFHL
Trigger: TAAATGGAAGAAACATTTCCACGTGGTGACTGCAGT...GTCCAACAGTGGGGGATGAATTTGACGGAAACATTGTATAAAATTCTTAAAGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
3UTR CAA 72 bp TATTATTTGAACACTCCATACATTAATACATGCATATaGATCATATCCGTCTACCTGCTTCCAACTGTCCCT +
Preference number: 4 (lower is better)
Translates to: YYLNTPYINTCI*IISVYLLPTVP
Trigger: AGGGACAGTTGGAAGCAGGTAGACGGATATGATCAATATGCATGTATTAATGTATGGAGTGTTCAAATAATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034133.14
CDS CCA 90 bp CCTCACCAGCTCCAGGACCTCAGGCCATGCGGCCTGAGCCGTGGTTaGGGGAGTGCTGCCAGACCCTGCCAGACTCAACTCCCGGGAGGC +
Preference number: 5 (lower is better)
Translates to: PHQLQDLRPCGLSRG*GSAARPCQTQLPGG
Trigger: GCCTCCCGGGAGTTGAGTCTGGCAGGGTCTGGCAGCACTCCCCCAACCACGGCTCAGGCCGCATGGCCTGAGGTCCTGGAGCTGGTGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034133.14
CDS CCA 90 bp GCTCCTTGTTCAGCTCCAGGACCTCAGGCCATGCGGCCTGAGCCGTaGTTGGGGGAGTGCTGCCAGACCCTGCCAGACTCAACTCCCGGG +
Preference number: 5 (lower is better)
Translates to: APCSAPGPQAMRPEP*LGECCQTLPDSTPG
Trigger: CCCGGGAGTTGAGTCTGGCAGGGTCTGGCAGCACTCCCCCAACCACGGCTCAGGCCGCATGGCCTGAGGTCCTGGAGCTGAACAAGGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000121972.8
CDS GCA 90 bp TCCTGGGCCCTGGGCTGCGTGGTCCTTCCCAGGCTCAGGGCTCACTaGTCCTGGGTCTATGCCTTGCTGCAGGTCTGTGGTCCCAACAGT +
Preference number: 5 (lower is better)
Translates to: SWALGCVVLPRLRAH*SWVYALLQVCGPNS
Trigger: ACTGTTGGGACCACAGACCTGCAGCAAGGCATAGACCCAGGAGCAGTGAGCCCTGAGCCTGGGAAGGACCACGCAGCCCAGGGCCCAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034133.14
ENSMUST00000121972.8
ENSMUST00000122452.8
CDS TCA 90 bp TCTGCTTGCTCCTTGTTCAGCTCCAGGACCTCAGGCCATGCGGCCTaGGCCGTGGTTGGGGGAGTGCTGCCAGACCCTGCCAGACTCAAC +
Preference number: 5 (lower is better)
Translates to: SACSLFSSRTSGHAA*AVVGGVLPDPARLN
Trigger: GTTGAGTCTGGCAGGGTCTGGCAGCACTCCCCCAACCACGGCTCAGGCCGCATGGCCTGAGGTCCTGGAGCTGAACAAGGAGCAAGCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000121972.8
CDS GCA 90 bp AGCAACTTCTGCTTGCTCCTTGTTCAGCTCCAGGACCTCAGGCCATaGGGCCTGAGCCGTGGTTGGGGGAGTGCTGCCAGACCCTGCCAG +
Preference number: 5 (lower is better)
Translates to: SNFCLLLVQLQDLRP*GLSRGWGSAARPCQ
Trigger: CTGGCAGGGTCTGGCAGCACTCCCCCAACCACGGCTCAGGCCGCATGGCCTGAGGTCCTGGAGCTGAACAAGGAGCAAGCAGAAGTTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000121972.8
CDS-3UTR CAA 90 bp TCCCTGCCCATCCTGAGCGTGCCTGCTCTTATTACCAAAAGGAAGGGTGCGGGGCCCGGGCACGGTTCCTaGCATGATGAAATCAGCCAC +
Preference number: 5 (lower is better)
Translates to: SLPILSVPALITKRKGAGPGHGS*HDEISH
Trigger: GTGGCTGATTTCATCATGCAAGGAACCGTGCCCGGG...CCCCGCACCCTTCCTTTTGGTAATAAGAGCAGGCACGCTCAGGATGGGCAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034133.14
CDS CCA 90 bp GCTGCCAGTGCAAGGCCTGTAGACCTCTCTGTACACCTGTGCACCTaGCCAAACCGACCCCCTCCTAAGACTTCATGTTGGGATACCGTG +
Preference number: 5 (lower is better)
Translates to: AASARPVDLSVHLCT*PNRPPPKTSCWDTV
Trigger: CACGGTATCCCAACATGAAGTCTTAGGAGGGGGTCGGTTTGGCCAGGTGCACAGGTGTACAGAGAGGTCTACAGGCCTTGCACTGGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000034133.14
ENSMUST00000121972.8
ENSMUST00000122452.8
CDS-3UTR CAA 90 bp TCCCTGCCCATCCTGAGCGTGCCTGCTCTTATTACCAAAAGGAAGGGTGCGGGGGCACTCATGCCACCATaGTTGCTGCTCCTCTTTGGC +
Preference number: 5 (lower is better)
Translates to: SLPILSVPALITKRKGAGALMPP*LLLLFG
Trigger: GCCAAAGAGGAGCAGCAACAATGGTGGCATGAGTGC...CCCCGCACCCTTCCTTTTGGTAATAAGAGCAGGCACGCTCAGGATGGGCAGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS TCA 90 bp CTCAACTCCCGGGAGGCCTCCAGCCGATGCAGATCTTGTTCCAGGTaGTCCATGCCTTGGCACACACACTGCAGCTTCTCTGTGACATCT +
Preference number: 5 (lower is better)
Translates to: LNSREASSRCRSCSR*SMPWHTHCSFSVTS
Trigger: AGATGTCACAGAGAAGCTGCAGTGTGTGTGCCAAGGCATGGATCACCTGGAACAAGATCTGCATCGGCTGGAGGCCTCCCGGGAGTTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000121972.8
CDS GCA 90 bp TCCGGGCCATCGGCCAGACTGCCTTTTCTCCCGGGCACGGTTCCTTaGATGATGAAATCAGCCACCTTGGAATTCTGGAATGTGGACCCT +
Preference number: 5 (lower is better)
Translates to: SGPSARLPFLPGTVP*MMKSATLEFWNVDP
Trigger: AGGGTCCACATTCCAGAATTCCAAGGTGGCTGATTTCATCATGCAAGGAACCGTGCCCGGGAGAAAAGGCAGTCTGGCCGATGGCCCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034133.14
CDS CCA 90 bp CCTGGGCCAAGAACTTCAACTCCCTGCCTCAGTGAGGCTCCTGCCTaGGTTAGGTCAGCTCCCTTCAGTGACGTATTGATGATGAGAGGC +
Preference number: 5 (lower is better)
Translates to: PGPRTSTPCLSEAPA*VRSAPFSDVLMMRG
Trigger: GCCTCTCATCATCAATACGTCACTGAAGGGAGCTGACCTAACCCAGGCAGGAGCCTCACTGAGGCAGGGAGTTGAAGTTCTTGGCCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034133.14
ENSMUST00000121972.8
ENSMUST00000122452.8
CDS CCA 90 bp CAGTGTTCTCACTGGCTGTCTCAGGAAGCCTGGATTCTGCTTCTGTaGGTAGGGGTACTTGGCCTGGGCCAAGAACTTCAACTCCCTGCC +
Preference number: 5 (lower is better)
Translates to: QCSHWLSQEAWILLL*VGVLGLGQELQLPA
Trigger: GGCAGGGAGTTGAAGTTCTTGGCCCAGGCCAAGTACCCCTACCCACAGAAGCAGAATCCAGGCTTCCTGAGACAGCCAGTGAGAACACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034133.14
ENSMUST00000121972.8
ENSMUST00000122452.8
CDS CCA 90 bp ATTCCAGGGTGGCTCCAGTGTTCTCACTGGCTGTCTCAGGAAGCCTaGATTCTGCTTCTGTGGGTAGGGGTACTTGGCCTGGGCCAAGAA +
Preference number: 5 (lower is better)
Translates to: IPGWLQCSHWLSQEA*ILLLWVGVLGLGQE
Trigger: TTCTTGGCCCAGGCCAAGTACCCCTACCCACAGAAGCAGAATCCAGGCTTCCTGAGACAGCCAGTGAGAACACTGGAGCCACCCTGGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034133.14
ENSMUST00000121972.8
ENSMUST00000122452.8
CDS-3UTR CAA 90 bp AACGATTCTCCCTGCCTCATCAGCCATCAGTTGCCAGTAGCTCCGCCAGTAGGGCCACCTTGTGACATCTaGAGGCTAGTGAGGACCTCG +
Preference number: 5 (lower is better)
Translates to: NDSPCLISHQLPVAPPVGPPCDI*RLVRTS
Trigger: CGAGGTCCTCACTAGCCTCAAGATGTCACAAGGTGG...CCCTACTGGCGGAGCTACTGGCAACTGATGGCTGATGAGGCAGGGAGAATCGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS GCA 90 bp ACCTCCTGTAGTCAGTACATGGTTTGGCTTCACTCCAGCAACTTCTaGTTGCTCCTTGTTCAGCTCCAGGACCTCAGGCCATGCGGCCTG +
Preference number: 5 (lower is better)
Translates to: TSCSQYMVWLHSSNF*LLLVQLQDLRPCGL
Trigger: CAGGCCGCATGGCCTGAGGTCCTGGAGCTGAACAAGGAGCAAGCAGAAGTTGCTGGAGTGAAGCCAAACCATGTACTGACTACAGGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121972.8
CDS CCA 90 bp TTAGTGGTCCTAGGGGCTGAGGGAGAGGCCCTGAACTCAGCCTCATaGCCTCTTCTGAAAGCCAACAGTCAGGCTTGCTGGATGAGGTTT +
Preference number: 5 (lower is better)
Translates to: LVVLGAEGEALNSAS*PLLKANSQACWMRF
Trigger: AAACCTCATCCAGCAAGCCTGACTGTTGGCTTTCAGAAGAGGCCATGAGGCTGAGTTCAGGGCCTCTCCCTCAGCCCCTAGGACCACTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034133.14
ENSMUST00000121972.8
ENSMUST00000122452.8
CDS CCA 90 bp CTCCTCTTTGGCAGGGGTGGAAATGGTCTGGCTCCTTTAGGGATCTaGTCTTCTAACACAGTCCCAAGGCCTGGAGCTTCTGCAGAGCCA +
Preference number: 5 (lower is better)
Translates to: LLFGRGGNGLAPLGI*SSNTVPRPGASAEP
Trigger: TGGCTCTGCAGAAGCTCCAGGCCTTGGGACTGTGTTAGAAGACCAGATCCCTAAAGGAGCCAGACCATTTCCACCCCTGCCAAAGAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034133.14
ENSMUST00000121972.8
ENSMUST00000122452.8
CDS-3UTR CAA 90 bp GCTCCGCCAGTAGGGGTGGGCCTCAGGAGTTTCCTCCCATTCTCATTGGAATTTCCACCTTGTGACATCTaGAGGCTAGTGAGGACCTCG +
Preference number: 5 (lower is better)
Translates to: APPVGVGLRSFLPFSLEFPPCDI*RLVRTS
Trigger: CGAGGTCCTCACTAGCCTCAAGATGTCACAAGGTGG...AAATTCCAATGAGAATGGGAGGAAACTCCTGAGGCCCACCCCTACTGGCGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR CAA 90 bp GCTCCGCCAGTAGGGGTGGGCCTCAGGAGTTTCCTCCCATTCTCATTGGAATTTTGTTGCTGCTCCTCTTaGGCAGGGGTGGAAATGGTC +
Preference number: 5 (lower is better)
Translates to: APPVGVGLRSFLPFSLEFCCCSS*AGVEMV
Trigger: GACCATTTCCACCCCTGCCAAAGAGGAGCAGCAACA...AAATTCCAATGAGAATGGGAGGAAACTCCTGAGGCCCACCCCTACTGGCGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS GCA 90 bp ACCTCCTGTAGTCAGTACATGGTTTGGCTTCACTCCAGCAACTTCTaGTTGCTCCTTGTTCTCCTCCGGGCCATCGGCCAGACTGCCTTT +
Preference number: 5 (lower is better)
Translates to: TSCSQYMVWLHSSNF*LLLVLLRAIGQTAF
Trigger: AAAGGCAGTCTGGCCGATGGCCCGGAGGAGAACAAGGAGCAAGCAGAAGTTGCTGGAGTGAAGCCAAACCATGTACTGACTACAGGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034133.14
CDS CCA 90 bp CCTAGAGGCGTCAGCTTGCACACCTCCTGTAGTCAGTACATGGTTTaGCTTCACTCCAGCAACTTCTGCTTGCTCCTTGTTCTCCTCCGG +
Preference number: 5 (lower is better)
Translates to: PRGVSLHTSCSQYMV*LHSSNFCLLLVLLR
Trigger: CCGGAGGAGAACAAGGAGCAAGCAGAAGTTGCTGGAGTGAAGCCAAACCATGTACTGACTACAGGAGGTGTGCAAGCTGACGCCTCTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034133.14
CDS CCA 90 bp TGTCGATTGCTACGGACAATTCCAGGGTGGCTCCAGTGTTCTCACTaGCTGTCTCAGGAAGCCTGGATTCTGCTTCTGTGGGTAGGGGTA +
Preference number: 5 (lower is better)
Translates to: CRLLRTIPGWLQCSH*LSQEAWILLLWVGV
Trigger: TACCCCTACCCACAGAAGCAGAATCCAGGCTTCCTGAGACAGCCAGTGAGAACACTGGAGCCACCCTGGAATTGTCCGTAGCAATCGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034133.14
ENSMUST00000121972.8
ENSMUST00000122452.8
CDS-3UTR CAA 90 bp GCTCCGCCAGTAGGGGTGGGCCTCAGGAGTTTCCTCCCATTCTCATTGGAATTTAGGTATGTCCTCCTTTaGGCTCTCTTCCCACAGCGT +
Preference number: 5 (lower is better)
Translates to: APPVGVGLRSFLPFSLEFRYVLL*ALFPQR
Trigger: ACGCTGTGGGAAGAGAGCCAAAAGGAGGACATACCT...AAATTCCAATGAGAATGGGAGGAAACTCCTGAGGCCCACCCCTACTGGCGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS GCA 90 bp CACATCCTCCCGGTCCTTTACGTTCTTCACTTTGATGATCTTGGCTaGCAGTGCAAGGCCTGTAGACCTCTCTGTACACCTGTGCACCTG +
Preference number: 5 (lower is better)
Translates to: HILPVLYVLHFDDLG*QCKACRPLCTPVHL
Trigger: CAGGTGCACAGGTGTACAGAGAGGTCTACAGGCCTTGCACTGGCAGCCAAGATCATCAAAGTGAAGAACGTAAAGGACCGGGAGGATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034133.14
ENSMUST00000121972.8
ENSMUST00000122452.8
CDS CCA 90 bp TATCTCCTCCTCTGCACTCATGCCACCATTGTTGCTGCTCCTCTTTaGCAGGGGTGGAAATGGTCTGGCTCCTTTAGGGATCTGGTCTTC +
Preference number: 5 (lower is better)
Translates to: YLLLCTHATIVAAPL*QGWKWSGSFRDLVF
Trigger: GAAGACCAGATCCCTAAAGGAGCCAGACCATTTCCACCCCTGCCAAAGAGGAGCAGCAACAATGGTGGCATGAGTGCAGAGGAGGAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034133.14
ENSMUST00000121972.8
ENSMUST00000122452.8
CDS-3UTR CAA 90 bp AACGATTCTCCCTGCCTCATCAGCCATCAGTTGCCAGTAGCTCCGCCAGTAGGGCTACAGCTCTTCTCTTaGACCAGTAACCGGGAAACA +
Preference number: 5 (lower is better)
Translates to: NDSPCLISHQLPVAPPVGLQLFS*TSNRET
Trigger: TGTTTCCCGGTTACTGGTCAAAGAGAAGAGCTGTAG...CCCTACTGGCGGAGCTACTGGCAACTGATGGCTGATGAGGCAGGGAGAATCGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS CCA 90 bp TCACAGATCTGCCTCGTGAACAAGACCACATCCAACTCAGTGAGGTaGTACTTCTCATCCGTGATCCGGTCAAAGAGTTCGCCTCCATCC +
Preference number: 5 (lower is better)
Translates to: SQICLVNKTTSNSVR*YFSSVIRSKSSPPS
Trigger: GGATGGAGGCGAACTCTTTGACCGGATCACGGATGAGAAGTACCACCTCACTGAGTTGGATGTGGTCTTGTTCACGAGGCAGATCTGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034133.14
ENSMUST00000121972.8
ENSMUST00000122452.8
CDS-3UTR CAA 90 bp TCTCTTCATATTACCACTTCGTGTTGCCTCAAGAATTCCCAGGCCCAGTGGAACCGGGAAACAAAGTCCTaGGCTTCCTCCGACAGCCCT +
Preference number: 5 (lower is better)
Translates to: SLHITTSCCLKNSQAQWNRETKS*ASSDSP
Trigger: AGGGCTGTCGGAGGAAGCCAAGGACTTTGTTTCCCG...GTTCCACTGGGCCTGGGAATTCTTGAGGCAACACGAAGTGGTAATATGAAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS TCA 90 bp TCCATTTACTCTGAGCCATATATTTCTGCAGCAGTTGTTGGGATCTaGGGCGAACGTTGGAGCCCGAGGCTTTGGCAGGCAGGTGACTTA +
Preference number: 5 (lower is better)
Translates to: SIYSEPYISAAVVGI*GERWSPRLWQAGDL
Trigger: TAAGTCACCTGCCTGCCAAAGCCTCGGGCTCCAACGTTCGCCTCAGATCCCAACAACTGCTGCAGAAATATATGGCTCAGAGTAAATGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034133.14
ENSMUST00000121972.8
ENSMUST00000122452.8
CDS-3UTR CAA 90 bp TCTCTTCATATTACCACTTCGTGTTGCCTCAAGAATTCCCAGGCCCAGTGGAACTGTTGCTGCTCCTCTTaGGCAGGGGTGGAAATGGTC +
Preference number: 5 (lower is better)
Translates to: SLHITTSCCLKNSQAQWNCCCSS*AGVEMV
Trigger: GACCATTTCCACCCCTGCCAAAGAGGAGCAGCAACA...GTTCCACTGGGCCTGGGAATTCTTGAGGCAACACGAAGTGGTAATATGAAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS TCA 90 bp GTTCCAGGTGATCCATGCCTTGGCACACACACTGCAGCTTCTCTGTaGCATCTTCTTGGAAATGCAAGAGTCTGTCGACCTTCTCAGTCA +
Preference number: 5 (lower is better)
Translates to: VPGDPCLGTHTAASL*HLLGNARVCRPSQS
Trigger: TGACTGAGAAGGTCGACAGACTCTTGCATTTCCAAGAAGATGTCACAGAGAAGCTGCAGTGTGTGTGCCAAGGCATGGATCACCTGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000121972.8
CDS-3UTR CAA 90 bp ACTCTTACATTCTTTCTGCCCCTTCCTCTGAGACGCTCCCTGAGCCTTGCACAGGTCAATGATCTTAATTaGATGCCCTGTCTGGCTGAC +
Preference number: 5 (lower is better)
Translates to: TLTFFLPLPLRRSLSLAQVNDLN*MPCLAD
Trigger: GTCAGCCAGACAGGGCATCAAATTAAGATCATTGAC...CTGTGCAAGGCTCAGGGAGCGTCTCAGAGGAAGGGGCAGAAAGAATGTAAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR CAA 90 bp ACTCTTACATTCTTTCTGCCCCTTCCTCTGAGACGCTCCCTGAGCCTTGCACAGTTTACGTTCTTCACTTaGATGATCTTGGCTGCCAGT +
Preference number: 5 (lower is better)
Translates to: TLTFFLPLPLRRSLSLAQFTFFT*MILAAS
Trigger: ACTGGCAGCCAAGATCATCAAAGTGAAGAACGTAAA...CTGTGCAAGGCTCAGGGAGCGTCTCAGAGGAAGGGGCAGAAAGAATGTAAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR CAA 90 bp GCCAATCTCCGTAAAATCTTGAGTAATCTCTTCATATTACCACTTCGTGTTGCCACTTCTGCTTGCTCCTaGTTCTCCTCCGGGCCATCG +
Preference number: 5 (lower is better)
Translates to: ANLRKILSNLFILPLRVATSACS*FSSGPS
Trigger: CGATGGCCCGGAGGAGAACAAGGAGCAAGCAGAAGT...GGCAACACGAAGTGGTAATATGAAGAGATTACTCAAGATTTTACGGAGATTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034133.14
CDS-3UTR CAA 90 bp GCCAATCTCCGTAAAATCTTGAGTAATCTCTTCATATTACCACTTCGTGTTGCCCAGGTGATCCATGCCTaGGCACACACACTGCAGCTT +
Preference number: 5 (lower is better)
Translates to: ANLRKILSNLFILPLRVAQVIHA*AHTLQL
Trigger: AAGCTGCAGTGTGTGTGCCAAGGCATGGATCACCTG...GGCAACACGAAGTGGTAATATGAAGAGATTACTCAAGATTTTACGGAGATTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034133.14
CDS-3UTR CAA 90 bp TCTCTTCATATTACCACTTCGTGTTGCCTCAAGAATTCCCAGGCCCAGTGGAACATGAAATCAGCCACCTaGGAATTCTGGAATGTGGAC +
Preference number: 5 (lower is better)
Translates to: SLHITTSCCLKNSQAQWNMKSAT*EFWNVD
Trigger: GTCCACATTCCAGAATTCCAAGGTGGCTGATTTCAT...GTTCCACTGGGCCTGGGAATTCTTGAGGCAACACGAAGTGGTAATATGAAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034133.14
CDS-3UTR CAA 90 bp TGGGCCTCAGGAGTTTCCTCCCATTCTCATTGGAATTTTGACCAACTTGATCTTTTTCTGCAGCAGTTGTaGGGATCTGAGGCGAACGTT +
Preference number: 5 (lower is better)
Translates to: WASGVSSHSHWNFDQLDLFLQQL*GSEANV
Trigger: AACGTTCGCCTCAGATCCCAACAACTGCTGCAGAAA...AAGATCAAGTTGGTCAAAATTCCAATGAGAATGGGAGGAAACTCCTGAGGCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR CAA 90 bp TCTCTTCATATTACCACTTCGTGTTGCCTCAAGAATTCCCAGGCCCAGTGGAACTCCAGCAACTTCTGCTaGCTCCTTGTTCGCAAATAT +
Preference number: 5 (lower is better)
Translates to: SLHITTSCCLKNSQAQWNSSNFC*LLVRKY
Trigger: ATATTTGCGAACAAGGAGCAAGCAGAAGTTGCTGGA...GTTCCACTGGGCCTGGGAATTCTTGAGGCAACACGAAGTGGTAATATGAAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000122452.8
CDS-3UTR CAA 90 bp GTCTTAACGACATCTCGTAGGACTCGTCTTCATCTACCAACTCTTACATTCTTTAGGTATGTCCTCCTTTaGGCTCTCTTCCCACAGCGT +
Preference number: 5 (lower is better)
Translates to: VLTTSRRTRLHLPTLTFFRYVLL*ALFPQR
Trigger: ACGCTGTGGGAAGAGAGCCAAAAGGAGGACATACCT...AAAGAATGTAAGAGTTGGTAGATGAAGACGAGTCCTACGAGATGTCGTTAAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR CAA 90 bp TCTTCCATACCTCACTCCCTACTGGCTTCTTTAATCATGACAAGTTTAGAATTCCTCATGCCACCATTGTaGCTGCTCCTCTTTGGCAGG +
Preference number: 5 (lower is better)
Translates to: SSIPHSLLASLIMTSLEFLMPPL*LLLFGR
Trigger: CCTGCCAAAGAGGAGCAGCAACAATGGTGGCATGAG...GAATTCTAAACTTGTCATGATTAAAGAAGCCAGTAGGGAGTGAGGTATGGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR CAA 90 bp TCTCTTCATATTACCACTTCGTGTTGCCTCAAGAATTCCCAGGCCCAGTGGAACTTTACGTTCTTCACTTaGATGATCTTGGCTGCCAGT +
Preference number: 5 (lower is better)
Translates to: SLHITTSCCLKNSQAQWNFTFFT*MILAAS
Trigger: ACTGGCAGCCAAGATCATCAAAGTGAAGAACGTAAA...GTTCCACTGGGCCTGGGAATTCTTGAGGCAACACGAAGTGGTAATATGAAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR CAA 90 bp TGGGCCTCAGGAGTTTCCTCCCATTCTCATTGGAATTTTGACCAACTTGATCTTATATTTCTGCAGCAGTaGTTGGGATCTGAGGCGAAC +
Preference number: 5 (lower is better)
Translates to: WASGVSSHSHWNFDQLDLIFLQQ*LGSEAN
Trigger: GTTCGCCTCAGATCCCAACAACTGCTGCAGAAATAT...AAGATCAAGTTGGTCAAAATTCCAATGAGAATGGGAGGAAACTCCTGAGGCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR CAA 90 bp GCCAATCTCCGTAAAATCTTGAGTAATCTCTTCATATTACCACTTCGTGTTGCCAATTTCCGTAGCCTGTaGACTGCAGTCACCACGTGG +
Preference number: 5 (lower is better)
Translates to: ANLRKILSNLFILPLRVANFRSL*TAVTTW
Trigger: CCACGTGGTGACTGCAGTCAACAGGCTACGGAAATT...GGCAACACGAAGTGGTAATATGAAGAGATTACTCAAGATTTTACGGAGATTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR CAA 90 bp TCTTTAAGAATTTTATACAATGTTTCCGTCAAATTCATCCCCCACTGTTGGACCCAGCCGATGCAGATCTaGTTCCAGGTGATCCATGCC +
Preference number: 5 (lower is better)
Translates to: SLRILYNVSVKFIPHCWTQPMQI*FQVIHA
Trigger: GGCATGGATCACCTGGAACAAGATCTGCATCGGCTG...GGTCCAACAGTGGGGGATGAATTTGACGGAAACATTGTATAAAATTCTTAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034133.14
CDS-3UTR CAA 90 bp TTCCATACCTCACTCCCTACTGGCTTCTTTAATCATGACAAGTTTAGAATTCAATCCAGCAACTTCTGCTaGCTCCTTGTTCTCCTCCGG +
Preference number: 5 (lower is better)
Translates to: FHTSLPTGFFNHDKFRIQSSNFC*LLVLLR
Trigger: CCGGAGGAGAACAAGGAGCAAGCAGAAGTTGCTGGA...TTGAATTCTAAACTTGTCATGATTAAAGAAGCCAGTAGGGAGTGAGGTATGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034133.14
CDS-3UTR CAA 90 bp TTCCATACCTCACTCCCTACTGGCTTCTTTAATCATGACAAGTTTAGAATTCAACTCATGCCACCATTGTaGCTGCTCCTCTTTGGCAGG +
Preference number: 5 (lower is better)
Translates to: FHTSLPTGFFNHDKFRIQLMPPL*LLLFGR
Trigger: CCTGCCAAAGAGGAGCAGCAACAATGGTGGCATGAG...TTGAATTCTAAACTTGTCATGATTAAAGAAGCCAGTAGGGAGTGAGGTATGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR CAA 90 bp GCCAATCTCCGTAAAATCTTGAGTAATCTCTTCATATTACCACTTCGTGTTGCCTTCACTTTGATGATCTaGGCTGCCAGTGCAAGGCCT +
Preference number: 5 (lower is better)
Translates to: ANLRKILSNLFILPLRVAFTLMI*AASARP
Trigger: AGGCCTTGCACTGGCAGCCAAGATCATCAAAGTGAA...GGCAACACGAAGTGGTAATATGAAGAGATTACTCAAGATTTTACGGAGATTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR CAA 90 bp TTCTTTAAGAATTTTATACAATGTTTCCGTCAAATTCATCCCCCACTGTTGGACCGGGAAACAAAGTCCTaGGCTTCCTCCGACAGCCCT +
Preference number: 5 (lower is better)
Translates to: FFKNFIQCFRQIHPPLLDRETKS*ASSDSP
Trigger: AGGGCTGTCGGAGGAAGCCAAGGACTTTGTTTCCCG...GTCCAACAGTGGGGGATGAATTTGACGGAAACATTGTATAAAATTCTTAAAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR CAA 90 bp TCTTCCATACCTCACTCCCTACTGGCTTCTTTAATCATGACAAGTTTAGAATTCAATTTCCGTAGCCTGTaGACTGCAGTCACCACGTGG +
Preference number: 5 (lower is better)
Translates to: SSIPHSLLASLIMTSLEFNFRSL*TAVTTW
Trigger: CCACGTGGTGACTGCAGTCAACAGGCTACGGAAATT...GAATTCTAAACTTGTCATGATTAAAGAAGCCAGTAGGGAGTGAGGTATGGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR CAA 90 bp TTCTTTAAGAATTTTATACAATGTTTCCGTCAAATTCATCCCCCACTGTTGGACGCACTCATGCCACCATaGTTGCTGCTCCTCTTTGGC +
Preference number: 5 (lower is better)
Translates to: FFKNFIQCFRQIHPPLLDALMPP*LLLLFG
Trigger: GCCAAAGAGGAGCAGCAACAATGGTGGCATGAGTGC...GTCCAACAGTGGGGGATGAATTTGACGGAAACATTGTATAAAATTCTTAAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR CAA 90 bp CTCCGTAAAATCTTGAGTAATCTCTTCATATTACCACTTCGTGTTGCCTCAAGATTCACTTTGATGATCTaGGCTGCCAGTGCAAGGCCT +
Preference number: 5 (lower is better)
Translates to: LRKILSNLFILPLRVASRFTLMI*AASARP
Trigger: AGGCCTTGCACTGGCAGCCAAGATCATCAAAGTGAA...TCTTGAGGCAACACGAAGTGGTAATATGAAGAGATTACTCAAGATTTTACGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR CAA 90 bp CTCCGTAAAATCTTGAGTAATCTCTTCATATTACCACTTCGTGTTGCCTCAAGATTTCTGCAGCAGTTGTaGGGATCTGAGGCGAACGTT +
Preference number: 5 (lower is better)
Translates to: LRKILSNLFILPLRVASRFLQQL*GSEANV
Trigger: AACGTTCGCCTCAGATCCCAACAACTGCTGCAGAAA...TCTTGAGGCAACACGAAGTGGTAATATGAAGAGATTACTCAAGATTTTACGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR CAA 90 bp CTCCGTAAAATCTTGAGTAATCTCTTCATATTACCACTTCGTGTTGCCTCAAGACTACAGCTCTTCTCTTaGACCAGTAACCGGGAAACA +
Preference number: 5 (lower is better)
Translates to: LRKILSNLFILPLRVASRLQLFS*TSNRET
Trigger: TGTTTCCCGGTTACTGGTCAAAGAGAAGAGCTGTAG...TCTTGAGGCAACACGAAGTGGTAATATGAAGAGATTACTCAAGATTTTACGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR CAA 90 bp CTCCGTAAAATCTTGAGTAATCTCTTCATATTACCACTTCGTGTTGCCTCAAGAATATTTCTGCAGCAGTaGTTGGGATCTGAGGCGAAC +
Preference number: 5 (lower is better)
Translates to: LRKILSNLFILPLRVASRIFLQQ*LGSEAN
Trigger: GTTCGCCTCAGATCCCAACAACTGCTGCAGAAATAT...TCTTGAGGCAACACGAAGTGGTAATATGAAGAGATTACTCAAGATTTTACGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR CAA 90 bp CTCCGTAAAATCTTGAGTAATCTCTTCATATTACCACTTCGTGTTGCCTCAAGAGTCAATGATCTTAATTaGATGCCCTGTCTGGCTGAC +
Preference number: 5 (lower is better)
Translates to: LRKILSNLFILPLRVASRVNDLN*MPCLAD
Trigger: GTCAGCCAGACAGGGCATCAAATTAAGATCATTGAC...TCTTGAGGCAACACGAAGTGGTAATATGAAGAGATTACTCAAGATTTTACGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR CAA 90 bp TCTTTAAGAATTTTATACAATGTTTCCGTCAAATTCATCCCCCACTGTTGGACCAGGAGTAGCCATCTCTaGCATATTGATAGGGATCCT +
Preference number: 5 (lower is better)
Translates to: SLRILYNVSVKFIPHCWTRSSHL*HIDRDP
Trigger: AGGATCCCTATCAATATGCAAGAGATGGCTACTCCT...GGTCCAACAGTGGGGGATGAATTTGACGGAAACATTGTATAAAATTCTTAAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS-3UTR CAA 90 bp TTCCATACCTCACTCCCTACTGGCTTCTTTAATCATGACAAGTTTAGAATTCAAAGGAGTAGCCATCTCTaGCATATTGATAGGGATCCT +
Preference number: 5 (lower is better)
Translates to: FHTSLPTGFFNHDKFRIQRSSHL*HIDRDP
Trigger: AGGATCCCTATCAATATGCAAGAGATGGCTACTCCT...TTGAATTCTAAACTTGTCATGATTAAAGAAGCCAGTAGGGAGTGAGGTATGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS TCA 72 bp GCCCTCACCAGCTCCAGGACCTCAGGCCATGCGGCCTaGGCCGTGGTTGGGGGAGTGCTGCCAGACCCTGCC +
Preference number: 6 (lower is better)
Translates to: ALTSSRTSGHAA*AVVGGVLPDPA
Trigger: GGCAGGGTCTGGCAGCACTCCCCCAACCACGGCTCAGGCCGCATGGCCTGAGGTCCTGGAGCTGGTGAGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034133.14
CDS CAA 90 bp CCCTCACCAGCTCCAGGACCTCAGGCCATGCGGCCTGAGCCGTGGTaGGGGGAGTGCTGCCAGACCCTGCCAGACTCAACTCCCGGGAGG +
Preference number: 6 (lower is better)
Translates to: PSPAPGPQAMRPEPW*GECCQTLPDSTPGR
Trigger: CCTCCCGGGAGTTGAGTCTGGCAGGGTCTGGCAGCACTCCCCCAACCACGGCTCAGGCCGCATGGCCTGAGGTCCTGGAGCTGGTGAGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034133.14
CDS GCA 72 bp CAGGCCATGCGGCCTGAGCCGTGGTTGGGGGAGTGCTaGCAGACCCTGCCAGACTCAACTCCCGGGAGGCCT +
Preference number: 6 (lower is better)
Translates to: QAMRPEPWLGEC*QTLPDSTPGRP
Trigger: AGGCCTCCCGGGAGTTGAGTCTGGCAGGGTCTGGCAGCACTCCCCCAACCACGGCTCAGGCCGCATGGCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000121972.8
CDS GCA 72 bp CCTCAGGCCATGCGGCCTGAGCCGTGGTTGGGGGAGTaGTGCCAGACCCTGCCAGACTCAACTCCCGGGAGG +
Preference number: 6 (lower is better)
Translates to: PQAMRPEPWLGE*CQTLPDSTPGR
Trigger: CCTCCCGGGAGTTGAGTCTGGCAGGGTCTGGCAGCACTCCCCCAACCACGGCTCAGGCCGCATGGCCTGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000121972.8
CDS TCA 72 bp TCCTTGTTCAGCTCCAGGACCTCAGGCCATGCGGCCTaGGCCGTGGTTGGGGGAGTGCTGCCAGACCCTGCC +
Preference number: 6 (lower is better)
Translates to: SLFSSRTSGHAA*AVVGGVLPDPA
Trigger: GGCAGGGTCTGGCAGCACTCCCCCAACCACGGCTCAGGCCGCATGGCCTGAGGTCCTGGAGCTGAACAAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000121972.8
CDS CAA 72 bp GCTCCAGGACCTCAGGCCATGCGGCCTGAGCCGTGGTaGGGGGAGTGCTGCCAGACCCTGCCAGACTCAACT +
Preference number: 6 (lower is better)
Translates to: APGPQAMRPEPW*GECCQTLPDST
Trigger: AGTTGAGTCTGGCAGGGTCTGGCAGCACTCCCCCAACCACGGCTCAGGCCGCATGGCCTGAGGTCCTGGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000121972.8
CDS GCA 72 bp ACCACCATCTTGAAGAGGGCTTCGAGCCTGGCACCATaGTGGGCACCCTCCTGCCGCACAGCCCTCACCAGC +
Preference number: 6 (lower is better)
Translates to: TTILKRASSLAP*WAPSCRTALTS
Trigger: GCTGGTGAGGGCTGTGCGGCAGGAGGGTGCCCAGCATGGTGCCAGGCTCGAAGCCCTCTTCAAGATGGTGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034133.14
CDS CCA 72 bp GTGGCTAAGCAGGCTCCGCCCAATGCTGGCAGACCCTaGGGGGCCAGACCCTCTGGGTCCTCCTCTGAAACT +
Preference number: 6 (lower is better)
Translates to: VAKQAPPNAGRP*GARPSGSSSET
Trigger: AGTTTCAGAGGAGGACCCAGAGGGTCTGGCCCCCCAGGGTCTGCCAGCATTGGGCGGAGCCTGCTTAGCCAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000121972.8
CDS CCA 72 bp ACCATCTTGAAGAGGGCTTCGAGCCTGGCACCATGCTaGGCACCCTCCTGCCGCACAGCCCTCACCAGCTCC +
Preference number: 6 (lower is better)
Translates to: TILKRASSLAPC*APSCRTALTSS
Trigger: GGAGCTGGTGAGGGCTGTGCGGCAGGAGGGTGCCCAGCATGGTGCCAGGCTCGAAGCCCTCTTCAAGATGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034133.14
CDS GCA 72 bp CTGGGCTGCGTGGTCCTTCCCAGGCTCAGGGCTCACTaGTCCTGGGTCTATGCCTTGCTGCAGGTCTGTGGT +
Preference number: 6 (lower is better)
Translates to: LGCVVLPRLRAH*SWVYALLQVCG
Trigger: ACCACAGACCTGCAGCAAGGCATAGACCCAGGAGCAGTGAGCCCTGAGCCTGGGAAGGACCACGCAGCCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034133.14
ENSMUST00000121972.8
ENSMUST00000122452.8
CDS CCA 72 bp ATATCTGGGTGTAATCTGATGCCCGCTGCTGGCCTCTaGTGCTGGGCCTGCACAGTGCTGGGACAGGGCACA +
Preference number: 6 (lower is better)
Translates to: ISGCNLMPAAGL*CWACTVLGQGT
Trigger: TGTGCCCTGTCCCAGCACTGTGCAGGCCCAGCACCAGAGGCCAGCAGCGGGCATCAGATTACACCCAGATAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000122452.8
CDS CAA 90 bp CCCTGCCAGACTCAACTCCCGGGAGGCCTCCAGCCGATGCAGATCTaGTTCCAGGTGATCCATGCCTTGGCACACACACTGCAGCTTCTC +
Preference number: 6 (lower is better)
Translates to: PCQTQLPGGLQPMQI*FQVIHALAHTLQLL
Trigger: GAGAAGCTGCAGTGTGTGTGCCAAGGCATGGATCACCTGGAACAAGATCTGCATCGGCTGGAGGCCTCCCGGGAGTTGAGTCTGGCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000121972.8
CDS CAA 90 bp GTGGACCCTACCAAAGTAATAGCCCTGTCCACAGCCACCACCATCTaGAAGAGGGCTTCGAGCCTGGCACCATGCTGGGCACCCTCCTGC +
Preference number: 6 (lower is better)
Translates to: VDPTKVIALSTATTI*KRASSLAPCWAPSC
Trigger: GCAGGAGGGTGCCCAGCATGGTGCCAGGCTCGAAGCCCTCTTCAAGATGGTGGTGGCTGTGGACAGGGCTATTACTTTGGTAGGGTCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034133.14
CDS GCA 72 bp AGGGGTACTTGGCCTGGGCCAAGAACTTCAACTCCCTaGCTCAGTGAGGCTCCTGCCTGGGTTAGGTCAGCT +
Preference number: 6 (lower is better)
Translates to: RGTWPGPRTSTP*LSEAPAWVRSA
Trigger: AGCTGACCTAACCCAGGCAGGAGCCTCACTGAGGCAGGGAGTTGAAGTTCTTGGCCCAGGCCAAGTACCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034133.14
ENSMUST00000121972.8
ENSMUST00000122452.8
CDS GCA 72 bp GCTCAGCCCCAGACCCTATCTCCTCCTCTGCACTCATaGCACCATTGTTGCTGCTCCTCTTTGGCAGGGGTG +
Preference number: 6 (lower is better)
Translates to: AQPQTLSPPLHS*HHCCCSSLAGV
Trigger: CACCCCTGCCAAAGAGGAGCAGCAACAATGGTGGCATGAGTGCAGAGGAGGAGATAGGGTCTGGGGCTGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034133.14
ENSMUST00000121972.8
ENSMUST00000122452.8
CDS GCA 72 bp GGCTCAGGGCTCACTGCTCCTGGGTCTATGCCTTGCTaGAGGTCTGTGGTCCCAACAGTCTCATCTCTCCAG +
Preference number: 6 (lower is better)
Translates to: GSGLTAPGSMPC*RSVVPTVSSLQ
Trigger: CTGGAGAGATGAGACTGTTGGGACCACAGACCTGCAGCAAGGCATAGACCCAGGAGCAGTGAGCCCTGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034133.14
ENSMUST00000121972.8
ENSMUST00000122452.8
CDS GCA 72 bp CCTTCCCAGGCTCAGGGCTCACTGCTCCTGGGTCTATaGCTTGCTGCAGGTCTGTGGTCCCAACAGTCTCAT +
Preference number: 6 (lower is better)
Translates to: PSQAQGSLLLGL*LAAGLWSQQSH
Trigger: ATGAGACTGTTGGGACCACAGACCTGCAGCAAGGCATAGACCCAGGAGCAGTGAGCCCTGAGCCTGGGAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034133.14
ENSMUST00000121972.8
ENSMUST00000122452.8
CDS CCA 72 bp CTAGGGGCTGAGGGAGAGGCCCTGAACTCAGCCTCATaGCCTCTTCTGAAAGCCAACAGTCAGGCTTGCTGG +
Preference number: 6 (lower is better)
Translates to: LGAEGEALNSAS*PLLKANSQACW
Trigger: CCAGCAAGCCTGACTGTTGGCTTTCAGAAGAGGCCATGAGGCTGAGTTCAGGGCCTCTCCCTCAGCCCCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034133.14
ENSMUST00000121972.8
ENSMUST00000122452.8
CDS CAA 72 bp CAGCCCCTCCACTGTTCGCACAGGTATGTCCTCCTTTaGGCTCTCTTCCCACAGCGTCCTAGAGGCGTCAGC +
Preference number: 6 (lower is better)
Translates to: QPLHCSHRYVLL*ALFPQRPRGVS
Trigger: GCTGACGCCTCTAGGACGCTGTGGGAAGAGAGCCAAAAGGAGGACATACCTGTGCGAACAGTGGAGGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034133.14
ENSMUST00000121972.8
ENSMUST00000122452.8
ENSMUST00000137290.2
CDS CAA 90 bp GATGAGAGGCAGCCCCTCCACTGTTCGCACAGGTATGTCCTCCTTTaGGCTCTCTTCCCACAGCGTCCTAGAGGCGTCAGCTTGCACACC +
Preference number: 6 (lower is better)
Translates to: DERQPLHCSHRYVLL*ALFPQRPRGVSLHT
Trigger: GGTGTGCAAGCTGACGCCTCTAGGACGCTGTGGGAAGAGAGCCAAAAGGAGGACATACCTGTGCGAACAGTGGAGGGGCTGCCTCTCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034133.14
ENSMUST00000121972.8
ENSMUST00000122452.8
ENSMUST00000137290.2
CDS CAA 90 bp GGCTCAGCCCCAGACCCTATCTCCTCCTCTGCACTCATGCCACCATaGTTGCTGCTCCTCTTTGGCAGGGGTGGAAATGGTCTGGCTCCT +
Preference number: 6 (lower is better)
Translates to: GSAPDPISSSALMPP*LLLLFGRGGNGLAP
Trigger: AGGAGCCAGACCATTTCCACCCCTGCCAAAGAGGAGCAGCAACAATGGTGGCATGAGTGCAGAGGAGGAGATAGGGTCTGGGGCTGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034133.14
ENSMUST00000121972.8
ENSMUST00000122452.8
CDS CAA 90 bp CTCCGGGCCATCGGCCAGACTGCCTTTTCTCCCGGGCACGGTTCCTaGCATGATGAAATCAGCCACCTTGGAATTCTGGAATGTGGACCC +
Preference number: 6 (lower is better)
Translates to: LRAIGQTAFSPGHGS*HDEISHLGILECGP
Trigger: GGGTCCACATTCCAGAATTCCAAGGTGGCTGATTTCATCATGCAAGGAACCGTGCCCGGGAGAAAAGGCAGTCTGGCCGATGGCCCGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034133.14
CDS CCA 72 bp AGCCCCTCCACTGTTCGCACAGGTATGTCCTCCTTTTaGCTCTCTTCCCACAGCGTCCTAGAGGCGTCAGCT +
Preference number: 6 (lower is better)
Translates to: SPSTVRTGMSSF*LSSHSVLEASA
Trigger: AGCTGACGCCTCTAGGACGCTGTGGGAAGAGAGCCAAAAGGAGGACATACCTGTGCGAACAGTGGAGGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000034133.14
ENSMUST00000121972.8
ENSMUST00000122452.8
ENSMUST00000137290.2
CDS CCA 72 bp ACACAGTCCCAAGGCCTGGAGCTTCTGCAGAGCCAATaGGACTGCCACTTTGGGTCTCAAGCAACTCCCCAG +
Preference number: 6 (lower is better)
Translates to: TQSQGLELLQSQ*DCHFGSQATPQ
Trigger: CTGGGGAGTTGCTTGAGACCCAAAGTGGCAGTCCCATTGGCTCTGCAGAAGCTCCAGGCCTTGGGACTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034133.14
ENSMUST00000121972.8
ENSMUST00000122452.8
CDS CCA 72 bp GGGCTGGGGGTGCTGCGCTGTCATCTAGAACCACAATaGCAGCCTCTGCAGCAGAAGATAGCCTTCCAGCTT +
Preference number: 6 (lower is better)
Translates to: GLGVLRCHLEPQ*QPLQQKIAFQL
Trigger: AAGCTGGAAGGCTATCTTCTGCTGCAGAGGCTGCCATTGTGGTTCTAGATGACAGCGCAGCACCCCCAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000034133.14
ENSMUST00000121972.8
ENSMUST00000122452.8
CDS CAA 72 bp ACTCAACTCCCGGGAGGCCTCCAGCCGATGCAGATCTaGTTCCAGGTGATCCATGCCTTGGCACACACACTG +
Preference number: 6 (lower is better)
Translates to: TQLPGGLQPMQI*FQVIHALAHTL
Trigger: CAGTGTGTGTGCCAAGGCATGGATCACCTGGAACAAGATCTGCATCGGCTGGAGGCCTCCCGGGAGTTGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000121972.8
CDS CAA 72 bp GCCTGGAGCTTCTGCAGAGCCAATGGGACTGCCACTTaGGGTCTCAAGCAACTCCCCAGGAGTAGCCATCTC +
Preference number: 6 (lower is better)
Translates to: AWSFCRANGTAT*GLKQLPRSSHL
Trigger: GAGATGGCTACTCCTGGGGAGTTGCTTGAGACCCAAAGTGGCAGTCCCATTGGCTCTGCAGAAGCTCCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034133.14
ENSMUST00000121972.8
ENSMUST00000122452.8
CDS CAA 90 bp AGTGAGGCTCCTGCCTGGGTTAGGTCAGCTCCCTTCAGTGACGTATaGATGATGAGAGGCAGCCCCTCCACTGTTCGCACAGGTATGTCC +
Preference number: 6 (lower is better)
Translates to: SEAPAWVRSAPFSDV*MMRGSPSTVRTGMS
Trigger: GGACATACCTGTGCGAACAGTGGAGGGGCTGCCTCTCATCATCAATACGTCACTGAAGGGAGCTGACCTAACCCAGGCAGGAGCCTCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034133.14
ENSMUST00000121972.8
ENSMUST00000122452.8
CDS TCA 72 bp TGCTTGCTCCTTGTTCGCAAATATCTGGGTGTAATCTaGTGCCCGCTGCTGGCCTCTGGTGCTGGGCCTGCA +
Preference number: 6 (lower is better)
Translates to: CLLLVRKYLGVI*CPLLASGAGPA
Trigger: TGCAGGCCCAGCACCAGAGGCCAGCAGCGGGCATCAGATTACACCCAGATATTTGCGAACAAGGAGCAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000122452.8
CDS CCA 72 bp GGAAGCCTGGATTCTGCTTCTGTGGGTAGGGGTACTTaGCCTGGGCCAAGAACTTCAACTCCCTGCCTCAGT +
Preference number: 6 (lower is better)
Translates to: GSLDSASVGRGT*PGPRTSTPCLS
Trigger: ACTGAGGCAGGGAGTTGAAGTTCTTGGCCCAGGCCAAGTACCCCTACCCACAGAAGCAGAATCCAGGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034133.14
ENSMUST00000121972.8
ENSMUST00000122452.8
CDS CCA 72 bp CCTGGAGCTTCTGCAGAGCCAATGGGACTGCCACTTTaGGTCTCAAGCAACTCCCCAGGAGTAGCCATCTCT +
Preference number: 6 (lower is better)
Translates to: PGASAEPMGLPL*VSSNSPGVAIS
Trigger: AGAGATGGCTACTCCTGGGGAGTTGCTTGAGACCCAAAGTGGCAGTCCCATTGGCTCTGCAGAAGCTCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034133.14
ENSMUST00000121972.8
ENSMUST00000122452.8
CDS CAA 72 bp ACCAAAGTAATAGCCCTGTCCACAGCCACCACCATCTaGAAGAGGGCTTCGAGCCTGGCACCATGCTGGGCA +
Preference number: 6 (lower is better)
Translates to: TKVIALSTATTI*KRASSLAPCWA
Trigger: TGCCCAGCATGGTGCCAGGCTCGAAGCCCTCTTCAAGATGGTGGTGGCTGTGGACAGGGCTATTACTTTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034133.14
CDS CAA 72 bp CCTGCCTGGGTTAGGTCAGCTCCCTTCAGTGACGTATaGATGATGAGAGGCAGCCCCTCCACTGTTCGCACA +
Preference number: 6 (lower is better)
Translates to: PAWVRSAPFSDV*MMRGSPSTVRT
Trigger: TGTGCGAACAGTGGAGGGGCTGCCTCTCATCATCAATACGTCACTGAAGGGAGCTGACCTAACCCAGGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034133.14
ENSMUST00000121972.8
ENSMUST00000122452.8
CDS TCA 72 bp GGGATACCGTGTAGCCTGCTGAGATCAGGGTATCTTTaGTGCTCACTACCCGGTGTTCAAAAGGGGCTGGGG +
Preference number: 6 (lower is better)
Translates to: GIPCSLLRSGYL*CSLPGVQKGLG
Trigger: CCCCAGCCCCTTTTGAACACCGGGTAGTGAGCATCAAAGATACCCTGATCTCAGCAGGCTACACGGTATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034133.14
ENSMUST00000121972.8
ENSMUST00000122452.8
CDS GCA 72 bp AGTACATGGTTTGGCTTCACTCCAGCAACTTCTGCTTaGTCCTTGTTCTCCTCCGGGCCATCGGCCAGACTG +
Preference number: 6 (lower is better)
Translates to: STWFGFTPATSA*SLFSSGPSARL
Trigger: CAGTCTGGCCGATGGCCCGGAGGAGAACAAGGAGCAAGCAGAAGTTGCTGGAGTGAAGCCAAACCATGTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034133.14
CDS GCA 72 bp TCTCATAGGCTCAGCCCCAGACCCTATCTCCTCCTCTaGACTCATGCCACCATTGTTGCTGCTCCTCTTTGG +
Preference number: 6 (lower is better)
Translates to: SHRLSPRPYLLL*THATIVAAPLW
Trigger: CCAAAGAGGAGCAGCAACAATGGTGGCATGAGTGCAGAGGAGGAGATAGGGTCTGGGGCTGAGCCTATGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034133.14
ENSMUST00000121972.8
ENSMUST00000122452.8
CDS CCA 72 bp CTACGGACAATTCCAGGGTGGCTCCAGTGTTCTCACTaGCTGTCTCAGGAAGCCTGGATTCTGCTTCTGTGG +
Preference number: 6 (lower is better)
Translates to: LRTIPGWLQCSH*LSQEAWILLLW
Trigger: CCACAGAAGCAGAATCCAGGCTTCCTGAGACAGCCAGTGAGAACACTGGAGCCACCCTGGAATTGTCCGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034133.14
ENSMUST00000121972.8
ENSMUST00000122452.8
CDS CCA 72 bp GGCAGGGGTGGAAATGGTCTGGCTCCTTTAGGGATCTaGTCTTCTAACACAGTCCCAAGGCCTGGAGCTTCT +
Preference number: 6 (lower is better)
Translates to: GRGGNGLAPLGI*SSNTVPRPGAS
Trigger: AGAAGCTCCAGGCCTTGGGACTGTGTTAGAAGACCAGATCCCTAAAGGAGCCAGACCATTTCCACCCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034133.14
ENSMUST00000121972.8
ENSMUST00000122452.8
CDS CAA 72 bp TGGTTTGGCTTCACTCCAGCAACTTCTGCTTGCTCCTaGTTCTCCTCCGGGCCATCGGCCAGACTGCCTTTT +
Preference number: 6 (lower is better)
Translates to: WFGFTPATSACS*FSSGPSARLPF
Trigger: AAAAGGCAGTCTGGCCGATGGCCCGGAGGAGAACAAGGAGCAAGCAGAAGTTGCTGGAGTGAAGCCAAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034133.14
CDS CAA 72 bp CCAGACCCTATCTCCTCCTCTGCACTCATGCCACCATaGTTGCTGCTCCTCTTTGGCAGGGGTGGAAATGGT +
Preference number: 6 (lower is better)
Translates to: PDPISSSALMPP*LLLLFGRGGNG
Trigger: ACCATTTCCACCCCTGCCAAAGAGGAGCAGCAACAATGGTGGCATGAGTGCAGAGGAGGAGATAGGGTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034133.14
ENSMUST00000121972.8
ENSMUST00000122452.8
CDS TCA 72 bp TCTGAGCCATATATTTCTGCAGCAGTTGTTGGGATCTaGGGCGAACGTTGGAGCCCGAGGCTTTGGCAGGCA +
Preference number: 6 (lower is better)
Translates to: SEPYISAAVVGI*GERWSPRLWQA
Trigger: TGCCTGCCAAAGCCTCGGGCTCCAACGTTCGCCTCAGATCCCAACAACTGCTGCAGAAATATATGGCTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034133.14
ENSMUST00000121972.8
ENSMUST00000122452.8
CDS GCA 72 bp CTTGAGGCTAGTGAGGACCTCGCTGATTCTGTCGATTaGTACGGACAATTCCAGGGTGGCTCCAGTGTTCTC +
Preference number: 6 (lower is better)
Translates to: LEASEDLADSVD*YGQFQGGSSVL
Trigger: GAGAACACTGGAGCCACCCTGGAATTGTCCGTAGCAATCGACAGAATCAGCGAGGTCCTCACTAGCCTCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034133.14
ENSMUST00000121972.8
ENSMUST00000122452.8
CDS GCA 72 bp AGTACATGGTTTGGCTTCACTCCAGCAACTTCTGCTTaGTCCTTGTTCAGCTCCAGGACCTCAGGCCATGCG +
Preference number: 6 (lower is better)
Translates to: STWFGFTPATSA*SLFSSRTSGHA
Trigger: CGCATGGCCTGAGGTCCTGGAGCTGAACAAGGAGCAAGCAGAAGTTGCTGGAGTGAAGCCAAACCATGTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121972.8
CDS CCA 72 bp GAGGCGTCAGCTTGCACACCTCCTGTAGTCAGTACATaGTTTGGCTTCACTCCAGCAACTTCTGCTTGCTCC +
Preference number: 6 (lower is better)
Translates to: EASACTPPVVST*FGFTPATSACS
Trigger: GGAGCAAGCAGAAGTTGCTGGAGTGAAGCCAAACCATGTACTGACTACAGGAGGTGTGCAAGCTGACGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034133.14
ENSMUST00000121972.8
ENSMUST00000122452.8
ENSMUST00000137290.2
CDS CCA 72 bp CATGCCACCATTGTTGCTGCTCCTCTTTGGCAGGGGTaGAAATGGTCTGGCTCCTTTAGGGATCTGGTCTTC +
Preference number: 6 (lower is better)
Translates to: HATIVAAPLWQG*KWSGSFRDLVF
Trigger: GAAGACCAGATCCCTAAAGGAGCCAGACCATTTCCACCCCTGCCAAAGAGGAGCAGCAACAATGGTGGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034133.14
ENSMUST00000121972.8
ENSMUST00000122452.8
CDS CCA 72 bp CTCTGCACTCATGCCACCATTGTTGCTGCTCCTCTTTaGCAGGGGTGGAAATGGTCTGGCTCCTTTAGGGAT +
Preference number: 6 (lower is better)
Translates to: LCTHATIVAAPL*QGWKWSGSFRD
Trigger: ATCCCTAAAGGAGCCAGACCATTTCCACCCCTGCCAAAGAGGAGCAGCAACAATGGTGGCATGAGTGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034133.14
ENSMUST00000121972.8
ENSMUST00000122452.8
CDS CCA 72 bp AACAGTCTCATCTCTCCAGTCCCTTGTAGCCAAGCTTaGTCCTCTCATAGGCTCAGCCCCAGACCCTATCTC +
Preference number: 6 (lower is better)
Translates to: NSLISPVPCSQA*SSHRLSPRPYL
Trigger: GAGATAGGGTCTGGGGCTGAGCCTATGAGAGGACCAAGCTTGGCTACAAGGGACTGGAGAGATGAGACTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034133.14
ENSMUST00000121972.8
ENSMUST00000122452.8
CDS CAA 72 bp TTGGCTCTCTTCCCACAGCGTCCTAGAGGCGTCAGCTaGCACACCTCCTGTAGTCAGTACATGGTTTGGCTT +
Preference number: 6 (lower is better)
Translates to: LALFPQRPRGVS*HTSCSQYMVWL
Trigger: AAGCCAAACCATGTACTGACTACAGGAGGTGTGCAAGCTGACGCCTCTAGGACGCTGTGGGAAGAGAGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034133.14
ENSMUST00000121972.8
ENSMUST00000122452.8
ENSMUST00000137290.2
CDS CAA 72 bp CAGTACATGGTTTGGCTTCACTCCAGCAACTTCTGCTaGCTCCTTGTTCAGCTCCAGGACCTCAGGCCATGC +
Preference number: 6 (lower is better)
Translates to: QYMVWLHSSNFC*LLVQLQDLRPC
Trigger: GCATGGCCTGAGGTCCTGGAGCTGAACAAGGAGCAAGCAGAAGTTGCTGGAGTGAAGCCAAACCATGTACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121972.8
CDS CAA 90 bp GGAGGCCTCCAGCCGATGCAGATCTTGTTCCAGGTGATCCATGCCTaGGCACACACACTGCAGCTTCTCTGTGACATCTTCTTGGAAATG +
Preference number: 6 (lower is better)
Translates to: GGLQPMQILFQVIHA*AHTLQLLCDIFLEM
Trigger: CATTTCCAAGAAGATGTCACAGAGAAGCTGCAGTGTGTGTGCCAAGGCATGGATCACCTGGAACAAGATCTGCATCGGCTGGAGGCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000121972.8
CDS CAA 90 bp TCCTGTAGTCAGTACATGGTTTGGCTTCACTCCAGCAACTTCTGCTaGCTCCTTGTTCTCCTCCGGGCCATCGGCCAGACTGCCTTTTCT +
Preference number: 6 (lower is better)
Translates to: SCSQYMVWLHSSNFC*LLVLLRAIGQTAFS
Trigger: AGAAAAGGCAGTCTGGCCGATGGCCCGGAGGAGAACAAGGAGCAAGCAGAAGTTGCTGGAGTGAAGCCAAACCATGTACTGACTACAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034133.14
CDS GCA 72 bp TCGGCCAGACTGCCTTTTCTCCCGGGCACGGTTCCTTaGATGATGAAATCAGCCACCTTGGAATTCTGGAAT +
Preference number: 6 (lower is better)
Translates to: SARLPFLPGTVP*MMKSATLEFWN
Trigger: ATTCCAGAATTCCAAGGTGGCTGATTTCATCATGCAAGGAACCGTGCCCGGGAGAAAAGGCAGTCTGGCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034133.14
CDS GCA 72 bp AGTCAGTACATGGTTTGGCTTCACTCCAGCAACTTCTaGTTGCTCCTTGTTCAGCTCCAGGACCTCAGGCCA +
Preference number: 6 (lower is better)
Translates to: SQYMVWLHSSNF*LLLVQLQDLRP
Trigger: TGGCCTGAGGTCCTGGAGCTGAACAAGGAGCAAGCAGAAGTTGCTGGAGTGAAGCCAAACCATGTACTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121972.8
CDS CAA 72 bp CAGCCGATGCAGATCTTGTTCCAGGTGATCCATGCCTaGGCACACACACTGCAGCTTCTCTGTGACATCTTC +
Preference number: 6 (lower is better)
Translates to: QPMQILFQVIHA*AHTLQLLCDIF
Trigger: GAAGATGTCACAGAGAAGCTGCAGTGTGTGTGCCAAGGCATGGATCACCTGGAACAAGATCTGCATCGGCTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000121972.8
CDS CAA 72 bp CGGGAAACAAAGTCCTTGGCTTCCTCCGACAGCCCTTaGAAGGTATCAGCATCGAAATCCCAGCTGCAGTTC +
Preference number: 6 (lower is better)
Translates to: RETKSLASSDSP*KVSASKSQLQF
Trigger: GAACTGCAGCTGGGATTTCGATGCTGATACCTTCAAAGGGCTGTCGGAGGAAGCCAAGGACTTTGTTTCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034133.14
ENSMUST00000121972.8
ENSMUST00000122452.8
CDS CAA 90 bp TTCTTCACATCCTCCCGGTCCTTTACGTTCTTCACTTTGATGATCTaGGCTGCCAGTGCAAGGCCTGTAGACCTCTCTGTACACCTGTGC +
Preference number: 6 (lower is better)
Translates to: FFTSSRSFTFFTLMI*AASARPVDLSVHLC
Trigger: GCACAGGTGTACAGAGAGGTCTACAGGCCTTGCACTGGCAGCCAAGATCATCAAAGTGAAGAACGTAAAGGACCGGGAGGATGTGAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034133.14
ENSMUST00000121972.8
ENSMUST00000122452.8
CDS TCA 72 bp GAAAGCCAACAGTCAGGCTTGCTGGATGAGGTTTCTTaGCCACCACCTTGTGACATCTTGAGGCTAGTGAGG +
Preference number: 6 (lower is better)
Translates to: ESQQSGLLDEVS*PPPCDILRLVR
Trigger: CCTCACTAGCCTCAAGATGTCACAAGGTGGTGGTCAAGAAACCTCATCCAGCAAGCCTGACTGTTGGCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034133.14
ENSMUST00000121972.8
ENSMUST00000122452.8
CDS TCA 72 bp GGGAAACAAAGTCCTTGGCTTCCTCCGACAGCCCTTTaGAGGTATCAGCATCGAAATCCCAGCTGCAGTTCA +
Preference number: 6 (lower is better)
Translates to: GKQSPWLPPTAL*RYQHRNPSCSS
Trigger: TGAACTGCAGCTGGGATTTCGATGCTGATACCTTCAAAGGGCTGTCGGAGGAAGCCAAGGACTTTGTTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034133.14
ENSMUST00000121972.8
ENSMUST00000122452.8
CDS GCA 72 bp TGGGTCTCAAGCAACTCCCCAGGAGTAGCCATCTCTTaGATATTGATAGGGATCCTGGGAAGTGCATCACCA +
Preference number: 6 (lower is better)
Translates to: WVSSNSPGVAIS*ILIGILGSASP
Trigger: TGGTGATGCACTTCCCAGGATCCCTATCAATATGCAAGAGATGGCTACTCCTGGGGAGTTGCTTGAGACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034133.14
ENSMUST00000121972.8
ENSMUST00000122452.8
CDS CCA 72 bp TGCCTCGTGAACAAGACCACATCCAACTCAGTGAGGTaGTACTTCTCATCCGTGATCCGGTCAAAGAGTTCG +
Preference number: 6 (lower is better)
Translates to: CLVNKTTSNSVR*YFSSVIRSKSS
Trigger: CGAACTCTTTGACCGGATCACGGATGAGAAGTACCACCTCACTGAGTTGGATGTGGTCTTGTTCACGAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034133.14
ENSMUST00000121972.8
ENSMUST00000122452.8
CDS CAA 72 bp TTGGGTCTCAAGCAACTCCCCAGGAGTAGCCATCTCTaGCATATTGATAGGGATCCTGGGAAGTGCATCACC +
Preference number: 6 (lower is better)
Translates to: LGLKQLPRSSHL*HIDRDPGKCIT
Trigger: GGTGATGCACTTCCCAGGATCCCTATCAATATGCAAGAGATGGCTACTCCTGGGGAGTTGCTTGAGACCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034133.14
ENSMUST00000121972.8
ENSMUST00000122452.8
CDS CAA 72 bp CTTCCATTTACTCTGAGCCATATATTTCTGCAGCAGTaGTTGGGATCTGAGGCGAACGTTGGAGCCCGAGGC +
Preference number: 6 (lower is better)
Translates to: LPFTLSHIFLQQ*LGSEANVGARG
Trigger: GCCTCGGGCTCCAACGTTCGCCTCAGATCCCAACAACTGCTGCAGAAATATATGGCTCAGAGTAAATGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034133.14
ENSMUST00000121972.8
ENSMUST00000122452.8
CDS CAA 90 bp ACTGCCACTTTGGGTCTCAAGCAACTCCCCAGGAGTAGCCATCTCTaGCATATTGATAGGGATCCTGGGAAGTGCATCACCACTGTGAAT +
Preference number: 6 (lower is better)
Translates to: TATLGLKQLPRSSHL*HIDRDPGKCITTVN
Trigger: ATTCACAGTGGTGATGCACTTCCCAGGATCCCTATCAATATGCAAGAGATGGCTACTCCTGGGGAGTTGCTTGAGACCCAAAGTGGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034133.14
ENSMUST00000121972.8
ENSMUST00000122452.8
CDS CAA 90 bp ATGTTTCTTCCATTTACTCTGAGCCATATATTTCTGCAGCAGTTGTaGGGATCTGAGGCGAACGTTGGAGCCCGAGGCTTTGGCAGGCAG +
Preference number: 6 (lower is better)
Translates to: MFLPFTLSHIFLQQL*GSEANVGARGFGRQ
Trigger: CTGCCTGCCAAAGCCTCGGGCTCCAACGTTCGCCTCAGATCCCAACAACTGCTGCAGAAATATATGGCTCAGAGTAAATGGAAGAAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS TCA 72 bp ATATTGATAGGGATCCTGGGAAGTGCATCACCACTGTaGATGTCACTGTCTGGAGTTAGTGGTCCTAGGGGC +
Preference number: 6 (lower is better)
Translates to: ILIGILGSASPL*MSLSGVSGPRG
Trigger: GCCCCTAGGACCACTAACTCCAGACAGTGACATTCACAGTGGTGATGCACTTCCCAGGATCCCTATCAATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034133.14
ENSMUST00000121972.8
ENSMUST00000122452.8
CDS CAA 72 bp AGTCTGTCGACCTTCTCAGTCAGCACATTAAGTTTTTaGTCCATGGTGGCTAAGCAGGCTCCGCCCAATGCT +
Preference number: 6 (lower is better)
Translates to: SLSTFSVSTLSF*SMVAKQAPPNA
Trigger: AGCATTGGGCGGAGCCTGCTTAGCCACCATGGACAAAAAACTTAATGTGCTGACTGAGAAGGTCGACAGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000121972.8
CDS CAA 72 bp TTCTTCACATCCTCCCGGTCCTTTACGTTCTTCACTTaGATGATCTTGGCTGCCAGTGCAAGGCCTGTAGAC +
Preference number: 6 (lower is better)
Translates to: FFTSSRSFTFFT*MILAASARPVD
Trigger: GTCTACAGGCCTTGCACTGGCAGCCAAGATCATCAAAGTGAAGAACGTAAAGGACCGGGAGGATGTGAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034133.14
ENSMUST00000121972.8
ENSMUST00000122452.8
CDS CAA 72 bp CTCTTCTCTTTGACCAGTAACCGGGAAACAAAGTCCTaGGCTTCCTCCGACAGCCCTTTGAAGGTATCAGCA +
Preference number: 6 (lower is better)
Translates to: LFSLTSNRETKS*ASSDSPLKVSA
Trigger: TGCTGATACCTTCAAAGGGCTGTCGGAGGAAGCCAAGGACTTTGTTTCCCGGTTACTGGTCAAAGAGAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034133.14
ENSMUST00000121972.8
ENSMUST00000122452.8
CDS CAA 72 bp CCATTTACTCTGAGCCATATATTTCTGCAGCAGTTGTaGGGATCTGAGGCGAACGTTGGAGCCCGAGGCTTT +
Preference number: 6 (lower is better)
Translates to: PFTLSHIFLQQL*GSEANVGARGF
Trigger: AAAGCCTCGGGCTCCAACGTTCGCCTCAGATCCCAACAACTGCTGCAGAAATATATGGCTCAGAGTAAATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034133.14
ENSMUST00000121972.8
ENSMUST00000122452.8
CDS CAA 90 bp TTGACCTCATTCTTCACATCCTCCCGGTCCTTTACGTTCTTCACTTaGATGATCTTGGCTGCCAGTGCAAGGCCTGTAGACCTCTCTGTA +
Preference number: 6 (lower is better)
Translates to: LTSFFTSSRSFTFFT*MILAASARPVDLSV
Trigger: TACAGAGAGGTCTACAGGCCTTGCACTGGCAGCCAAGATCATCAAAGTGAAGAACGTAAAGGACCGGGAGGATGTGAAGAATGAGGTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034133.14
ENSMUST00000121972.8
ENSMUST00000122452.8
CDS CAA 90 bp ATCCTACAGCTCTTCTCTTTGACCAGTAACCGGGAAACAAAGTCCTaGGCTTCCTCCGACAGCCCTTTGAAGGTATCAGCATCGAAATCC +
Preference number: 6 (lower is better)
Translates to: ILQLFSLTSNRETKS*ASSDSPLKVSASKS
Trigger: GGATTTCGATGCTGATACCTTCAAAGGGCTGTCGGAGGAAGCCAAGGACTTTGTTTCCCGGTTACTGGTCAAAGAGAAGAGCTGTAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034133.14
ENSMUST00000121972.8
ENSMUST00000122452.8
CDS CAA 90 bp GAAATGTTTCTTCCATTTACTCTGAGCCATATATTTCTGCAGCAGTaGTTGGGATCTGAGGCGAACGTTGGAGCCCGAGGCTTTGGCAGG +
Preference number: 6 (lower is better)
Translates to: EMFLPFTLSHIFLQQ*LGSEANVGARGFGR
Trigger: CCTGCCAAAGCCTCGGGCTCCAACGTTCGCCTCAGATCCCAACAACTGCTGCAGAAATATATGGCTCAGAGTAAATGGAAGAAACATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034133.14
ENSMUST00000122452.8
CDS CAA 72 bp CCGGGCACGGTTCCTTGCATGATGAAATCAGCCACCTaGGAATTCTGGAATGTGGACCCTACCAAAGTAATA +
Preference number: 6 (lower is better)
Translates to: PGTVPCMMKSAT*EFWNVDPTKVI
Trigger: TATTACTTTGGTAGGGTCCACATTCCAGAATTCCAAGGTGGCTGATTTCATCATGCAAGGAACCGTGCCCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034133.14
CDS CAA 90 bp ACCAGTAACCGGGAAACAAAGTCCTTGGCTTCCTCCGACAGCCCTTaGAAGGTATCAGCATCGAAATCCCAGCTGCAGTTCACAATAAAA +
Preference number: 6 (lower is better)
Translates to: TSNRETKSLASSDSP*KVSASKSQLQFTIK
Trigger: TTTTATTGTGAACTGCAGCTGGGATTTCGATGCTGATACCTTCAAAGGGCTGTCGGAGGAAGCCAAGGACTTTGTTTCCCGGTTACTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034133.14
ENSMUST00000121972.8
ENSMUST00000122452.8
CDS CCA 72 bp GTTCCTTGCATGATGAAATCAGCCACCTTGGAATTCTaGAATGTGGACCCTACCAAAGTAATAGCCCTGTCC +
Preference number: 6 (lower is better)
Translates to: VPCMMKSATLEF*NVDPTKVIALS
Trigger: GGACAGGGCTATTACTTTGGTAGGGTCCACATTCCAGAATTCCAAGGTGGCTGATTTCATCATGCAAGGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034133.14
CDS GCA 72 bp AGTCAGTACATGGTTTGGCTTCACTCCAGCAACTTCTaGTTGCTCCTTGTTCGCAAATATCTGGGTGTAATC +
Preference number: 6 (lower is better)
Translates to: SQYMVWLHSSNF*LLLVRKYLGVI
Trigger: GATTACACCCAGATATTTGCGAACAAGGAGCAAGCAGAAGTTGCTGGAGTGAAGCCAAACCATGTACTGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000122452.8