Pregenerated sensors for MYLIP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038175Ensembl transcript IDs: ENSMUST00000038275.11, ENSMUST00000222178.2
Found 123 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGTTCAAGGAATGTGTCCGTGTCCCAGAGTTCTTCCTGGTGGCCATaGGGCCTGTTGCTTCTCCTCACGGAAGAGGTGTGGTCACATTCT | + |
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Preference number: 1 (lower is better) Translates to: SSRNVSVSQSSSWWP*GLLLLLTEEVWSHS Trigger: AGAATGTGACCACACCTCTTCCGTGAGGAGAAGCAACAGGCCCCATGGCCACCAGGAAGAACTCTGGGACACGGACACATTCCTTGAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| 3UTR TCA 90 bp | AAGTTTGATCTTCAAGCAAGGCGACACCCATGGGTGCAGCTGGAGTaGGTGCTTGGGAAAGTGAAGAACCACTCGGGCATACTGAGTGGC | + |
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Preference number: 1 (lower is better) Translates to: KFDLQARRHPWVQLE*VLGKVKNHSGILSG Trigger: GCCACTCAGTATGCCCGAGTGGTTCTTCACTTTCCCAAGCACTCACTCCAGCTGCACCCATGGGTGTCGCCTTGCTTGAAGATCAAACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038275.11 |
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| 3UTR GCA 90 bp | ATGTGTCCGTGTCCCAGAGTTCTTCCTGGTGGCCATGGGGCCTGTTaGTTCTCCTCACGGAAGAGGTGTGGTCACATTCTTGTTTTCTTT | + |
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Preference number: 1 (lower is better) Translates to: MCPCPRVLPGGHGAC*FSSRKRCGHILVFF Trigger: AAAGAAAACAAGAATGTGACCACACCTCTTCCGTGAGGAGAAGCAACAGGCCCCATGGCCACCAGGAAGAACTCTGGGACACGGACACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| 3UTR GCA 90 bp | AAGGAAGTCACCCACGGTGAGTTACCTATTGGCTCTCAGCCAGACTaGTTCCAATCTGACAACATTGCTGTCAACCCTTGGGAAGTCACA | + |
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Preference number: 1 (lower is better) Translates to: KEVTHGELPIGSQPD*FQSDNIAVNPWEVT Trigger: TGTGACTTCCCAAGGGTTGACAGCAATGTTGTCAGATTGGAAGCAGTCTGGCTGAGAGCCAATAGGTAACTCACCGTGGGTGACTTCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038275.11 |
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| 3UTR CAA 90 bp | AATGTGTCCGTGTCCCAGAGTTCTTCCTGGTGGCCATGGGGCCTGTaGCTTCTCCTCACGGAAGAGGTGTGGTCACATTCTTGTTTTCTT | + |
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Preference number: 2 (lower is better) Translates to: NVSVSQSSSWWPWGL*LLLTEEVWSHSCFL Trigger: AAGAAAACAAGAATGTGACCACACCTCTTCCGTGAGGAGAAGCAACAGGCCCCATGGCCACCAGGAAGAACTCTGGGACACGGACACATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| 3UTR-3UTR TCA 90 bp | TGGAAGACACCGAGGGGGCAGGACAATGAGTATGGAAGCACTGACATAGGAAAAGAGTGCTTGGGAAAGTaGAGAACCACTCGGGCATAC | + |
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Preference number: 2 (lower is better) Translates to: WKTPRGQDNEYGSTDIGKECLGK*RTTRAY Trigger: GTATGCCCGAGTGGTTCTTCACTTTCCCAAGCACTC...TTTTCCTATGTCAGTGCTTCCATACTCATTGTCCTGCCCCCTCGGTGTCTTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038275.11 |
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| 3UTR-3UTR GCA 90 bp | TCTCAGCCAGACTGCTTCCAATCTGACAACATTGCTGTCAACCCTTGGGAAGTCTCATTTCCTAAAAGGTaGCCACGGTTGGGCCATGTT | + |
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Preference number: 2 (lower is better) Translates to: SQPDCFQSDNIAVNPWEVSFPKR*PRLGHV Trigger: AACATGGCCCAACCGTGGGCACCTTTTAGGAAATGA...GACTTCCCAAGGGTTGACAGCAATGTTGTCAGATTGGAAGCAGTCTGGCTGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038275.11 |
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| 3UTR-3UTR CCA 90 bp | TGGAAGACACCGAGGGGGCAGGACAATGAGTATGGAAGCACTGACATAGGAAAACTCACGGAAGAGGTGTaGTCACATTCTTGTTTTCTT | + |
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Preference number: 2 (lower is better) Translates to: WKTPRGQDNEYGSTDIGKLTEEV*SHSCFL Trigger: AAGAAAACAAGAATGTGACCACACCTCTTCCGTGAG...TTTTCCTATGTCAGTGCTTCCATACTCATTGTCCTGCCCCCTCGGTGTCTTCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038275.11 |
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| 3UTR CAA 90 bp | ACAAAAAGGAGACACTATCTAGAAACCTATAAGGCTGTAGAAAGTTaGATCTTCAAGCAAGGCGACACCCATGGGTGCAGCTGGAGTGAG | + |
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Preference number: 2 (lower is better) Translates to: TKRRHYLETYKAVES*IFKQGDTHGCSWSE Trigger: CTCACTCCAGCTGCACCCATGGGTGTCGCCTTGCTTGAAGATCAAACTTTCTACAGCCTTATAGGTTTCTAGATAGTGTCTCCTTTTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038275.11 |
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| 3UTR CCA 72 bp | TCAAGGAATGTGTCCGTGTCCCAGAGTTCTTCCTGGTaGCCATGGGGCCTGTTGCTTCTCCTCACGGAAGAG | + |
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Preference number: 3 (lower is better) Translates to: SRNVSVSQSSSW*PWGLLLLLTEE Trigger: CTCTTCCGTGAGGAGAAGCAACAGGCCCCATGGCCACCAGGAAGAACTCTGGGACACGGACACATTCCTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| 3UTR CCA 72 bp | AAGGCGACACCCATGGGTGCAGCTGGAGTGAGTGCTTaGGAAAGTGAAGAACCACTCGGGCATACTGAGTGG | + |
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Preference number: 3 (lower is better) Translates to: KATPMGAAGVSA*ESEEPLGHTEW Trigger: CCACTCAGTATGCCCGAGTGGTTCTTCACTTTCCCAAGCACTCACTCCAGCTGCACCCATGGGTGTCGCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038275.11 |
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| 3UTR TCA 72 bp | CTTCAAGCAAGGCGACACCCATGGGTGCAGCTGGAGTaGGTGCTTGGGAAAGTGAAGAACCACTCGGGCATA | + |
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Preference number: 3 (lower is better) Translates to: LQARRHPWVQLE*VLGKVKNHSGI Trigger: TATGCCCGAGTGGTTCTTCACTTTCCCAAGCACTCACTCCAGCTGCACCCATGGGTGTCGCCTTGCTTGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038275.11 |
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| 3UTR GCA 72 bp | TGTCCCAGAGTTCTTCCTGGTGGCCATGGGGCCTGTTaGTTCTCCTCACGGAAGAGGTGTGGTCACATTCTT | + |
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Preference number: 3 (lower is better) Translates to: CPRVLPGGHGAC*FSSRKRCGHIL Trigger: AAGAATGTGACCACACCTCTTCCGTGAGGAGAAGCAACAGGCCCCATGGCCACCAGGAAGAACTCTGGGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| 3UTR CCA 72 bp | AGTTCAAGGAATGTGTCCGTGTCCCAGAGTTCTTCCTaGTGGCCATGGGGCCTGTTGCTTCTCCTCACGGAA | + |
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Preference number: 3 (lower is better) Translates to: SSRNVSVSQSSS*WPWGLLLLLTE Trigger: TTCCGTGAGGAGAAGCAACAGGCCCCATGGCCACCAGGAAGAACTCTGGGACACGGACACATTCCTTGAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| 3UTR-3UTR CAA 90 bp | CCAACCCTAAAGTTCAAGGAATGTGTCCGTGTCCCAGAGTTCTTCCTGGTGGCCTTACAATACTGCAGCTaGTGGGGACATGGCTTGTCC | + |
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Preference number: 3 (lower is better) Translates to: PTLKFKECVRVPEFFLVALQYCS*WGHGLS Trigger: GGACAAGCCATGTCCCCACAAGCTGCAGTATTGTAA...GGCCACCAGGAAGAACTCTGGGACACGGACACATTCCTTGAACTTTAGGGTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| 3UTR-3UTR CAA 90 bp | CATGGGGCCTGTTGCTTCTCCTCACGGAAGAGGTGTGGTCACATTCTTGTTTTCTTACAATACTGCAGCTaGTGGGGACATGGCTTGTCC | + |
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Preference number: 3 (lower is better) Translates to: HGACCFSSRKRCGHILVFLQYCS*WGHGLS Trigger: GGACAAGCCATGTCCCCACAAGCTGCAGTATTGTAA...GAAAACAAGAATGTGACCACACCTCTTCCGTGAGGAGAAGCAACAGGCCCCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| 3UTR GCA 72 bp | ACCCACGGTGAGTTACCTATTGGCTCTCAGCCAGACTaGTTCCAATCTGACAACATTGCTGTCAACCCTTGG | + |
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Preference number: 3 (lower is better) Translates to: THGELPIGSQPD*FQSDNIAVNPW Trigger: CCAAGGGTTGACAGCAATGTTGTCAGATTGGAAGCAGTCTGGCTGAGAGCCAATAGGTAACTCACCGTGGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038275.11 |
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| 3UTR TCA 72 bp | AAAGGTGCCCACGGTTGGGCCATGTTGCCACTTGACTaGCGAAGACGATTCTATCTACTCCTTTACTTGATC | + |
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Preference number: 3 (lower is better) Translates to: KGAHGWAMLPLD*RRRFYLLLYLI Trigger: GATCAAGTAAAGGAGTAGATAGAATCGTCTTCGTCAGTCAAGTGGCAACATGGCCCAACCGTGGGCACCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| 3UTR TCA 72 bp | CCTAAAAGGTGCCCACGGTTGGGCCATGTTGCCACTTaGCTGACGAAGACGATTCTATCTACTCCTTTACTT | + |
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Preference number: 3 (lower is better) Translates to: PKRCPRLGHVAT*LTKTILSTPLL Trigger: AAGTAAAGGAGTAGATAGAATCGTCTTCGTCAGTCAAGTGGCAACATGGCCCAACCGTGGGCACCTTTTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| 3UTR GCA 72 bp | GCTACTCTCGCTTTCCAATCTCCAAAGCCCAGGGAGTaGTTGACTCTACCATGTATGTCTCTTAACCAAACT | + |
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Preference number: 3 (lower is better) Translates to: ATLAFQSPKPRE*LTLPCMSLNQT Trigger: AGTTTGGTTAAGAGACATACATGGTAGAGTCAAGCACTCCCTGGGCTTTGGAGATTGGAAAGCGAGAGTAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038275.11 |
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| 3UTR GCA 72 bp | TCTTCACAAAGTTATTATTCTTATAGTTTACAATACTaGAGCTTGTGGGGACATGGCTTGTCCATCGAGTGC | + |
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Preference number: 3 (lower is better) Translates to: SSQSYYSYSLQY*SLWGHGLSIEC Trigger: GCACTCGATGGACAAGCCATGTCCCCACAAGCTGCAGTATTGTAAACTATAAGAATAATAACTTTGTGAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| CDS-3UTR TCA 90 bp | GTCCCAGAGTTCTTCCTGGTGGCCATGGGGCCTGTTGCTTCTCCTCACGGAAGAGGGTCTGCTGGCAGCTaGGGCCCTCACAGCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: VPEFFLVAMGPVASPHGRGSAGS*GPHSCC Trigger: GCAGCAGCTGTGAGGGCCTCAGCTGCCAGCAGACCC...TCTTCCGTGAGGAGAAGCAACAGGCCCCATGGCCACCAGGAAGAACTCTGGGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| CDS-3UTR GCA 90 bp | TCCCAGAGTTCTTCCTGGTGGCCATGGGGCCTGTTGCTTCTCCTCACGGAAGAGCAGACCGGACAGGACTaGAGCTGGGCTGCACAGCTC | + |
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Preference number: 4 (lower is better) Translates to: SQSSSWWPWGLLLLLTEEQTGQD*SWAAQL Trigger: GAGCTGTGCAGCCCAGCTGCAGTCCTGTCCGGTCTG...CTCTTCCGTGAGGAGAAGCAACAGGCCCCATGGCCACCAGGAAGAACTCTGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| CDS-3UTR CCA 90 bp | TCCGTGTCCCAGAGTTCTTCCTGGTGGCCATGGGGCCTGTTGCTTCTCCTCACGAGACGCCTGCACACCTaGTTGAGACAGTCCTCGCCG | + |
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Preference number: 4 (lower is better) Translates to: SVSQSSSWWPWGLLLLLTRRLHT*LRQSSP Trigger: CGGCGAGGACTGTCTCAACCAGGTGTGCAGGCGTCT...CGTGAGGAGAAGCAACAGGCCCCATGGCCACCAGGAAGAACTCTGGGACACGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038275.11 |
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| CDS-3UTR CCA 90 bp | TCCCAGAGTTCTTCCTGGTGGCCATGGGGCCTGTTGCTTCTCCTCACGGAAGAGGGGGAACACTGGAGGTaGCCTGCCAAGAGGGACTCT | + |
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Preference number: 4 (lower is better) Translates to: SQSSSWWPWGLLLLLTEEGEHWR*PAKRDS Trigger: AGAGTCCCTCTTGGCAGGCCACCTCCAGTGTTCCCC...CTCTTCCGTGAGGAGAAGCAACAGGCCCCATGGCCACCAGGAAGAACTCTGGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| CDS-3UTR TCA 90 bp | GGCTCTCAGCCAGACTGCTTCCAATCTGACAACATTGCTGTCAACCCTTGGGAAGGGTCTGCTGGCAGCTaGGGCCCTCACAGCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: GSQPDCFQSDNIAVNPWEGSAGS*GPHSCC Trigger: GCAGCAGCTGTGAGGGCCTCAGCTGCCAGCAGACCC...TTCCCAAGGGTTGACAGCAATGTTGTCAGATTGGAAGCAGTCTGGCTGAGAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038275.11 |
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| CDS-3UTR GCA 90 bp | AAGGTGCCCACGGTTGGGCCATGTTGCCACTTGACTGACGAAGACGATTCTATCTGCAGCACCCGGGTCTaGTGGCAGCTGAGGCCCTCA | + |
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Preference number: 4 (lower is better) Translates to: KVPTVGPCCHLTDEDDSICSTRV*WQLRPS Trigger: TGAGGGCCTCAGCTGCCAGCAGACCCGGGTGCTGCA...GATAGAATCGTCTTCGTCAGTCAAGTGGCAACATGGCCCAACCGTGGGCACCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| CDS-3UTR CCA 90 bp | AGAGTTCTTCCTGGTGGCCATGGGGCCTGTTGCTTCTCCTCACGGAAGAGGTGTGGAGACTGGTGTGGGTaGGCAGGTAGACGTGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: RVLPGGHGACCFSSRKRCGDWCG*AGRRAG Trigger: TCCAGCACGTCTACCTGCCCACCCACACCAGTCTCC...ACACCTCTTCCGTGAGGAGAAGCAACAGGCCCCATGGCCACCAGGAAGAACTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| CDS-3UTR GCA 90 bp | TCCGTGTCCCAGAGTTCTTCCTGGTGGCCATGGGGCCTGTTGCTTCTCCTCACGAGCTGCTGCAGCTCATaGTGCTGTCTGAGGACTTCA | + |
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Preference number: 4 (lower is better) Translates to: SVSQSSSWWPWGLLLLLTSCCSS*CCLRTS Trigger: TGAAGTCCTCAGACAGCAGCATGAGCTGCAGCAGCT...CGTGAGGAGAAGCAACAGGCCCCATGGCCACCAGGAAGAACTCTGGGACACGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| CDS-3UTR GCA 90 bp | CATGGGGCCTGTTGCTTCTCCTCACGGAAGAGGTGTGGTCACATTCTTGTTTTCTGCAGCACCCGGGTCTaGTGGCAGCTGAGGCCCTCA | + |
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Preference number: 4 (lower is better) Translates to: HGACCFSSRKRCGHILVFCSTRV*WQLRPS Trigger: TGAGGGCCTCAGCTGCCAGCAGACCCGGGTGCTGCA...GAAAACAAGAATGTGACCACACCTCTTCCGTGAGGAGAAGCAACAGGCCCCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| CDS-3UTR CCA 90 bp | CCAACCCTAAAGTTCAAGGAATGTGTCCGTGTCCCAGAGTTCTTCCTGGTGGCCTACTCGGCAGAGGCCTaGCTGATGCCCTCCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: PTLKFKECVRVPEFFLVAYSAEA*LMPSSS Trigger: GGAGCTGGAGGGCATCAGCCAGGCCTCTGCCGAGTA...GGCCACCAGGAAGAACTCTGGGACACGGACACATTCCTTGAACTTTAGGGTTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| CDS-3UTR CCA 90 bp | GGCTCTCAGCCAGACTGCTTCCAATCTGACAACATTGCTGTCAACCCTTGGGAAAGCACCCGGGTCTGCTaGCAGCTGAGGCCCTCACAG | + |
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Preference number: 4 (lower is better) Translates to: GSQPDCFQSDNIAVNPWESTRVC*QLRPSQ Trigger: CTGTGAGGGCCTCAGCTGCCAGCAGACCCGGGTGCT...TTCCCAAGGGTTGACAGCAATGTTGTCAGATTGGAAGCAGTCTGGCTGAGAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038275.11 |
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| CDS-3UTR TCA 90 bp | GTCCCAGAGTTCTTCCTGGTGGCCATGGGGCCTGTTGCTTCTCCTCACGGAAGATCTCCAAATTTGGTCTaGGCCAGGAGGGCACTGAGT | + |
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Preference number: 4 (lower is better) Translates to: VPEFFLVAMGPVASPHGRSPNLV*ARRALS Trigger: ACTCAGTGCCCTCCTGGCTCAGACCAAATTTGGAGA...TCTTCCGTGAGGAGAAGCAACAGGCCCCATGGCCACCAGGAAGAACTCTGGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| CDS-3UTR GCA 90 bp | AAGGTGCCCACGGTTGGGCCATGTTGCCACTTGACTGACGAAGACGATTCTATCCTGAGTTCCACGGCCTaGTCTGGGGAACACTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: KVPTVGPCCHLTDEDDSILSSTA*SGEHWR Trigger: CCTCCAGTGTTCCCCAGAGCAGGCCGTGGAACTCAG...GATAGAATCGTCTTCGTCAGTCAAGTGGCAACATGGCCCAACCGTGGGCACCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| CDS-3UTR GCA 90 bp | AGAGTTCTTCCTGGTGGCCATGGGGCCTGTTGCTTCTCCTCACGGAAGAGGTGTGTAGAGGCCGCTGGCTaGTCTGGTGCTGATCATCTT | + |
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Preference number: 4 (lower is better) Translates to: RVLPGGHGACCFSSRKRCVEAAG*SGADHL Trigger: AAGATGATCAGCACCAGAGCAGCCAGCGGCCTCTAC...ACACCTCTTCCGTGAGGAGAAGCAACAGGCCCCATGGCCACCAGGAAGAACTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| CDS-3UTR GCA 90 bp | GCTCTCAGCCAGACTGCTTCCAATCTGACAACATTGCTGTCAACCCTTGGGAAGTTGCGCAGCTTCTCCTaGAGCACCCGGGTCTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: ALSQTASNLTTLLSTLGKLRSFS*STRVCW Trigger: CCAGCAGACCCGGGTGCTGCAGGAGAAGCTGCGCAA...CTTCCCAAGGGTTGACAGCAATGTTGTCAGATTGGAAGCAGTCTGGCTGAGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038275.11 |
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| CDS-3UTR GCA 90 bp | CATGGGGCCTGTTGCTTCTCCTCACGGAAGAGGTGTGGTCACATTCTTGTTTTCTTGCGCAGCTTCTCCTaGAGCACCCGGGTCTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: HGACCFSSRKRCGHILVFLRSFS*STRVCW Trigger: CCAGCAGACCCGGGTGCTGCAGGAGAAGCTGCGCAA...GAAAACAAGAATGTGACCACACCTCTTCCGTGAGGAGAAGCAACAGGCCCCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| CDS-3UTR CCA 90 bp | CCAACCCTAAAGTTCAAGGAATGTGTCCGTGTCCCAGAGTTCTTCCTGGTGGCCTGCTCTGGGGAACACTaGAGGTGGCCTGCCAAGAGG | + |
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Preference number: 4 (lower is better) Translates to: PTLKFKECVRVPEFFLVACSGEH*RWPAKR Trigger: CCTCTTGGCAGGCCACCTCCAGTGTTCCCCAGAGCA...GGCCACCAGGAAGAACTCTGGGACACGGACACATTCCTTGAACTTTAGGGTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| CDS-3UTR CCA 90 bp | CCAACCCTAAAGTTCAAGGAATGTGTCCGTGTCCCAGAGTTCTTCCTGGTGGCCGGAGACTGGTGTGGGTaGGCAGGTAGACGTGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: PTLKFKECVRVPEFFLVAGDWCG*AGRRAG Trigger: TCCAGCACGTCTACCTGCCCACCCACACCAGTCTCC...GGCCACCAGGAAGAACTCTGGGACACGGACACATTCCTTGAACTTTAGGGTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| 3UTR CAA 72 bp | GTGTCCCAGAGTTCTTCCTGGTGGCCATGGGGCCTGTaGCTTCTCCTCACGGAAGAGGTGTGGTCACATTCT | + |
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Preference number: 4 (lower is better) Translates to: VSQSSSWWPWGL*LLLTEEVWSHS Trigger: AGAATGTGACCACACCTCTTCCGTGAGGAGAAGCAACAGGCCCCATGGCCACCAGGAAGAACTCTGGGACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| CDS-3UTR TCA 90 bp | CATGGGGCCTGTTGCTTCTCCTCACGGAAGAGGTGTGGTCACATTCTTGTTTTCGGCAGAAGGTGGAGTTaGTCTCCTCCTCGCAGCACG | + |
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Preference number: 4 (lower is better) Translates to: HGACCFSSRKRCGHILVFGRRWS*SPPRST Trigger: CGTGCTGCGAGGAGGAGATCAACTCCACCTTCTGCC...GAAAACAAGAATGTGACCACACCTCTTCCGTGAGGAGAAGCAACAGGCCCCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| CDS-3UTR GCA 90 bp | ATCTTCAAGCAAGGCGACACCCATGGGTGCAGCTGGAGTGAGTGCTTGGGAAAGTGCTGCAGCTCATGCTaGTGTCTGAGGACTTCAGGG | + |
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Preference number: 4 (lower is better) Translates to: IFKQGDTHGCSWSECLGKCCSSC*CLRTSG Trigger: CCCTGAAGTCCTCAGACAGCAGCATGAGCTGCAGCA...CTTTCCCAAGCACTCACTCCAGCTGCACCCATGGGTGTCGCCTTGCTTGAAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038275.11 |
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| CDS-3UTR CCA 90 bp | TGGAAGACACCGAGGGGGCAGGACAATGAGTATGGAAGCACTGACATAGGAAAATCGCAGCACACAGTGTaGCCGCAGGGGCAGAAGGTG | + |
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Preference number: 4 (lower is better) Translates to: WKTPRGQDNEYGSTDIGKSQHTV*PQGQKV Trigger: CACCTTCTGCCCCTGCGGCCACACTGTGTGCTGCGA...TTTTCCTATGTCAGTGCTTCCATACTCATTGTCCTGCCCCCTCGGTGTCTTCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038275.11 |
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| CDS-3UTR TCA 90 bp | TCTCAGCCAGACTGCTTCCAATCTGACAACATTGCTGTCAACCCTTGGGAAGTCGGCAGAAGGTGGAGTTaGTCTCCTCCTCGCAGCACG | + |
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Preference number: 4 (lower is better) Translates to: SQPDCFQSDNIAVNPWEVGRRWS*SPPRST Trigger: CGTGCTGCGAGGAGGAGATCAACTCCACCTTCTGCC...GACTTCCCAAGGGTTGACAGCAATGTTGTCAGATTGGAAGCAGTCTGGCTGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038275.11 |
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| CDS-3UTR CCA 90 bp | CTGTTGCTTCTCCTCACGGAAGAGGTGTGGTCACATTCTTGTTTTCTTTTCCTCAGCACCCGGGTCTGCTaGCAGCTGAGGCCCTCACAG | + |
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Preference number: 4 (lower is better) Translates to: LLLLLTEEVWSHSCFLFLSTRVC*QLRPSQ Trigger: CTGTGAGGGCCTCAGCTGCCAGCAGACCCGGGTGCT...GAGGAAAAGAAAACAAGAATGTGACCACACCTCTTCCGTGAGGAGAAGCAACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| CDS-3UTR GCA 90 bp | TCTCAGCCAGACTGCTTCCAATCTGACAACATTGCTGTCAACCCTTGGGAAGTCGCCAGCCCATCCATCTaGTGGGAGATCCGGTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SQPDCFQSDNIAVNPWEVASPSI*WEIRFL Trigger: GAGAAACCGGATCTCCCAGCAGATGGATGGGCTGGC...GACTTCCCAAGGGTTGACAGCAATGTTGTCAGATTGGAAGCAGTCTGGCTGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038275.11 |
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| CDS-3UTR CCA 90 bp | GTCCCAGAGTTCTTCCTGGTGGCCATGGGGCCTGTTGCTTCTCCTCACGGAAGATGTTCAAAGTGGAGCTaGAGAGCTCTTTCTCACACA | + |
|
Preference number: 4 (lower is better) Translates to: VPEFFLVAMGPVASPHGRCSKWS*RALSHT Trigger: TGTGTGAGAAAGAGCTCTCCAGCTCCACTTTGAACA...TCTTCCGTGAGGAGAAGCAACAGGCCCCATGGCCACCAGGAAGAACTCTGGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| CDS-3UTR CCA 90 bp | GTTGCTTCTCCTCACGGAAGAGGTGTGGTCACATTCTTGTTTTCTTTTCCTCCTTACTCGGCAGAGGCCTaGCTGATGCCCTCCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VASPHGRGVVTFLFSFPPYSAEA*LMPSSS Trigger: GGAGCTGGAGGGCATCAGCCAGGCCTCTGCCGAGTA...AGGAGGAAAAGAAAACAAGAATGTGACCACACCTCTTCCGTGAGGAGAAGCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| CDS-3UTR CCA 90 bp | ATCTTCAAGCAAGGCGACACCCATGGGTGCAGCTGGAGTGAGTGCTTGGGAAAGTGTACAGAGCCCTCCTaGCATGGTCATAGACCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: IFKQGDTHGCSWSECLGKCTEPS*HGHRPL Trigger: AAGAGGTCTATGACCATGCCAGGAGGGCTCTGTACA...CTTTCCCAAGCACTCACTCCAGCTGCACCCATGGGTGTCGCCTTGCTTGAAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038275.11 |
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| CDS-3UTR CCA 90 bp | CTGTTGCTTCTCCTCACGGAAGAGGTGTGGTCACATTCTTGTTTTCTTTTCCTCTCGCAGCACACAGTGTaGCCGCAGGGGCAGAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LLLLLTEEVWSHSCFLFLSQHTV*PQGQKV Trigger: CACCTTCTGCCCCTGCGGCCACACTGTGTGCTGCGA...GAGGAAAAGAAAACAAGAATGTGACCACACCTCTTCCGTGAGGAGAAGCAACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| CDS-3UTR TCA 90 bp | GGCTCTCAGCCAGACTGCTTCCAATCTGACAACATTGCTGTCAACCCTTGGGAATCTCCAAATTTGGTCTaGGCCAGGAGGGCACTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GSQPDCFQSDNIAVNPWESPNLV*ARRALS Trigger: ACTCAGTGCCCTCCTGGCTCAGACCAAATTTGGAGA...TTCCCAAGGGTTGACAGCAATGTTGTCAGATTGGAAGCAGTCTGGCTGAGAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038275.11 |
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| CDS-3UTR GCA 90 bp | TGGAAGACACCGAGGGGGCAGGACAATGAGTATGGAAGCACTGACATAGGAAAACTCGCCGTTGGCTTTTaGCTCCACCTCTACCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: WKTPRGQDNEYGSTDIGKLAVGF*LHLYLH Trigger: ATGGAGGTAGAGGTGGAGGCAAAAGCCAACGGCGAG...TTTTCCTATGTCAGTGCTTCCATACTCATTGTCCTGCCCCCTCGGTGTCTTCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038275.11 |
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| CDS-3UTR GCA 90 bp | CATGGGGCCTGTTGCTTCTCCTCACGGAAGAGGTGTGGTCACATTCTTGTTTTCAGCTGCTGCAGCTCATaGTGCTGTCTGAGGACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: HGACCFSSRKRCGHILVFSCCSS*CCLRTS Trigger: TGAAGTCCTCAGACAGCAGCATGAGCTGCAGCAGCT...GAAAACAAGAATGTGACCACACCTCTTCCGTGAGGAGAAGCAACAGGCCCCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| CDS-3UTR CCA 90 bp | GTTGCTTCTCCTCACGGAAGAGGTGTGGTCACATTCTTGTTTTCTTTTCCTCCTGGGGAACACTGGAGGTaGCCTGCCAAGAGGGACTCT | + |
|
Preference number: 4 (lower is better) Translates to: VASPHGRGVVTFLFSFPPGEHWR*PAKRDS Trigger: AGAGTCCCTCTTGGCAGGCCACCTCCAGTGTTCCCC...AGGAGGAAAAGAAAACAAGAATGTGACCACACCTCTTCCGTGAGGAGAAGCAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
||
| CDS-3UTR CCA 90 bp | AGAGTTCTTCCTGGTGGCCATGGGGCCTGTTGCTTCTCCTCACGGAAGAGGTGTTGTTCAAAGTGGAGCTaGAGAGCTCTTTCTCACACA | + |
|
Preference number: 4 (lower is better) Translates to: RVLPGGHGACCFSSRKRCCSKWS*RALSHT Trigger: TGTGTGAGAAAGAGCTCTCCAGCTCCACTTTGAACA...ACACCTCTTCCGTGAGGAGAAGCAACAGGCCCCATGGCCACCAGGAAGAACTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
||
| CDS-3UTR CCA 90 bp | GCTCTCAGCCAGACTGCTTCCAATCTGACAACATTGCTGTCAACCCTTGGGAAGACGCCATACACAGCATaGCTTCCTTCAGCTTGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: ALSQTASNLTTLLSTLGKTPYTA*LPSACA Trigger: TGCGCAAGCTGAAGGAAGCCATGCTGTGTATGGCGT...CTTCCCAAGGGTTGACAGCAATGTTGTCAGATTGGAAGCAGTCTGGCTGAGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038275.11 |
||
| CDS-3UTR GCA 90 bp | TCTCAGCCAGACTGCTTCCAATCTGACAACATTGCTGTCAACCCTTGGGAAGTCTTTAAGGCGGTAAGGTaGCAGCCCATCCATCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SQPDCFQSDNIAVNPWEVFKAVR*QPIHLL Trigger: CAGCAGATGGATGGGCTGGCACCTTACCGCCTTAAA...GACTTCCCAAGGGTTGACAGCAATGTTGTCAGATTGGAAGCAGTCTGGCTGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038275.11 |
||
| CDS-3UTR GCA 90 bp | GGGCCTGTTGCTTCTCCTCACGGAAGAGGTGTGGTCACATTCTTGTTTTCTTTTTGCTGCAGCTCATGCTaGTGTCTGAGGACTTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GPVASPHGRGVVTFLFSFCCSSC*CLRTSG Trigger: CCCTGAAGTCCTCAGACAGCAGCATGAGCTGCAGCA...AAAAGAAAACAAGAATGTGACCACACCTCTTCCGTGAGGAGAAGCAACAGGCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
||
| CDS-3UTR GCA 90 bp | TTCTTTTCCTCCTTGTTTCTGAAAATGTCTCATGGCAGATGGGTGTTGAGAGTGCAGACCGGACAGGACTaGAGCTGGGCTGCACAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FFSSLFLKMSHGRWVLRVQTGQD*SWAAQL Trigger: GAGCTGTGCAGCCCAGCTGCAGTCCTGTCCGGTCTG...CACTCTCAACACCCATCTGCCATGAGACATTTTCAGAAACAAGGAGGAAAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
||
| CDS-3UTR CCA 90 bp | AACCCTAAAGTTCAAGGAATGTGTCCGTGTCCCAGAGTTCTTCCTGGTGGCCATACGCCATACACAGCATaGCTTCCTTCAGCTTGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: NPKVQGMCPCPRVLPGGHTPYTA*LPSACA Trigger: TGCGCAAGCTGAAGGAAGCCATGCTGTGTATGGCGT...ATGGCCACCAGGAAGAACTCTGGGACACGGACACATTCCTTGAACTTTAGGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
||
| CDS-3UTR TCA 90 bp | AACCCTAAAGTTCAAGGAATGTGTCCGTGTCCCAGAGTTCTTCCTGGTGGCCATCACCTTTGCTCCCCGTaGACTGCAGCCCAAAATAAT | + |
|
Preference number: 4 (lower is better) Translates to: NPKVQGMCPCPRVLPGGHHLCSP*TAAQNN Trigger: ATTATTTTGGGCTGCAGTTCACGGGGAGCAAAGGTG...ATGGCCACCAGGAAGAACTCTGGGACACGGACACATTCCTTGAACTTTAGGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038275.11 |
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| CDS-3UTR CCA 90 bp | GGGCCTGTTGCTTCTCCTCACGGAAGAGGTGTGGTCACATTCTTGTTTTCTTTTAGCCCATCCATCTGCTaGGAGATCCGGTTTCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GPVASPHGRGVVTFLFSFSPSIC*EIRFLR Trigger: TCTGAGAAACCGGATCTCCCAGCAGATGGATGGGCT...AAAAGAAAACAAGAATGTGACCACACCTCTTCCGTGAGGAGAAGCAACAGGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038275.11 |
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| CDS-3UTR CCA 90 bp | TGGAAGACACCGAGGGGGCAGGACAATGAGTATGGAAGCACTGACATAGGAAAATGTAGTCTCCAAATTTaGTCTGAGCCAGGAGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: WKTPRGQDNEYGSTDIGKCSLQI*SEPGGH Trigger: GTGCCCTCCTGGCTCAGACCAAATTTGGAGACTACA...TTTTCCTATGTCAGTGCTTCCATACTCATTGTCCTGCCCCCTCGGTGTCTTCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038275.11 |
||
| CDS-3UTR CCA 90 bp | AACCCTAAAGTTCAAGGAATGTGTCCGTGTCCCAGAGTTCTTCCTGGTGGCCATTGTAGTCTCCAAATTTaGTCTGAGCCAGGAGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: NPKVQGMCPCPRVLPGGHCSLQI*SEPGGH Trigger: GTGCCCTCCTGGCTCAGACCAAATTTGGAGACTACA...ATGGCCACCAGGAAGAACTCTGGGACACGGACACATTCCTTGAACTTTAGGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| CDS-3UTR CCA 90 bp | TGGAAGACACCGAGGGGGCAGGACAATGAGTATGGAAGCACTGACATAGGAAAAACATTCTTTCCTGACTaGGTGGCCATCTGCACCACA | + |
|
Preference number: 4 (lower is better) Translates to: WKTPRGQDNEYGSTDIGKTFFPD*VAICTT Trigger: TGTGGTGCAGATGGCCACCCAGTCAGGAAAGAATGT...TTTTCCTATGTCAGTGCTTCCATACTCATTGTCCTGCCCCCTCGGTGTCTTCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000038275.11 |
||
| CDS-3UTR TCA 90 bp | AACCCTAAAGTTCAAGGAATGTGTCCGTGTCCCAGAGTTCTTCCTGGTGGCCATTCTGCTCCTGTAAGATaGGATGAGGCTCCACAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: NPKVQGMCPCPRVLPGGHSAPVR*DEAPQR Trigger: TCTTTGTGGAGCCTCATCTCATCTTACAGGAGCAGA...ATGGCCACCAGGAAGAACTCTGGGACACGGACACATTCCTTGAACTTTAGGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| 3UTR CAA 72 bp | TTGGCTCTCAGCCAGACTGCTTCCAATCTGACAACATaGCTGTCAACCCTTGGGAAGTCACAGGATTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LALSQTASNLTT*LSTLGKSQDCF Trigger: AAAGCAATCCTGTGACTTCCCAAGGGTTGACAGCAATGTTGTCAGATTGGAAGCAGTCTGGCTGAGAGCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038275.11 |
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| CDS-3UTR TCA 90 bp | CAAAGTTATTATTCTTATAGTTTACAATACTGCAGCTTGTGGGGACATGGCTTGGCCTGCACACCTGGTTaGGACAGTCCTCGCCGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: QSYYSYSLQYCSLWGHGLACTPG*DSPRRW Trigger: CCAACGGCGAGGACTGTCTCAACCAGGTGTGCAGGC...CAAGCCATGTCCCCACAAGCTGCAGTATTGTAAACTATAAGAATAATAACTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038275.11 |
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| CDS-3UTR GCA 90 bp | TTCTTTTCCTCCTTGTTTCTGAAAATGTCTCATGGCAGATGGGTGTTGAGAGTGGTAGAGGCCGCTGGCTaGTCTGGTGCTGATCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: FFSSLFLKMSHGRWVLRVVEAAG*SGADHL Trigger: AAGATGATCAGCACCAGAGCAGCCAGCGGCCTCTAC...CACTCTCAACACCCATCTGCCATGAGACATTTTCAGAAACAAGGAGGAAAAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| CDS-3UTR TCA 90 bp | CATGGGGCCTGTTGCTTCTCCTCACGGAAGAGGTGTGGTCACATTCTTGTTTTCCTTTGGATGTTCTCTTaGTGTCGAAGACGTATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: HGACCFSSRKRCGHILVFLWMFS*CRRRIS Trigger: AGAAATACGTCTTCGACATCAAGAGAACATCCAAAG...GAAAACAAGAATGTGACCACACCTCTTCCGTGAGGAGAAGCAACAGGCCCCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| CDS-3UTR TCA 90 bp | CTGTTGCTTCTCCTCACGGAAGAGGTGTGGTCACATTCTTGTTTTCTTTTCCTCTCCTGTAAGATGAGATaGGGCTCCACAAAGAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: LLLLLTEEVWSHSCFLFLSCKMR*GSTKNL Trigger: CAAGTTCTTTGTGGAGCCTCATCTCATCTTACAGGA...GAGGAAAAGAAAACAAGAATGTGACCACACCTCTTCCGTGAGGAGAAGCAACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| CDS-3UTR TCA 90 bp | GTTGCTTCTCCTCACGGAAGAGGTGTGGTCACATTCTTGTTTTCTTTTCCTCCTTCCTGTAAGATGAGATaGGGCTCCACAAAGAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: VASPHGRGVVTFLFSFPPSCKMR*GSTKNL Trigger: CAAGTTCTTTGTGGAGCCTCATCTCATCTTACAGGA...AGGAGGAAAAGAAAACAAGAATGTGACCACACCTCTTCCGTGAGGAGAAGCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| CDS-3UTR GCA 90 bp | CTGTTGCTTCTCCTCACGGAAGAGGTGTGGTCACATTCTTGTTTTCTTTTCCTCTGCAAGAAAAAGATATaGCTTGTCTGCTCCTGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: LLLLLTEEVWSHSCFLFLCKKKI*LVCSCK Trigger: CTTACAGGAGCAGACAAGGCATATCTTTTTCTTGCA...GAGGAAAAGAAAACAAGAATGTGACCACACCTCTTCCGTGAGGAGAAGCAACAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| CDS-3UTR CCA 90 bp | CAAAGTTATTATTCTTATAGTTTACAATACTGCAGCTTGTGGGGACATGGCTTGACATTCTTTCCTGACTaGGTGGCCATCTGCACCACA | + |
|
Preference number: 4 (lower is better) Translates to: QSYYSYSLQYCSLWGHGLTFFPD*VAICTT Trigger: TGTGGTGCAGATGGCCACCCAGTCAGGAAAGAATGT...CAAGCCATGTCCCCACAAGCTGCAGTATTGTAAACTATAAGAATAATAACTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| CDS-3UTR CCA 90 bp | CAAAGTTATTATTCTTATAGTTTACAATACTGCAGCTTGTGGGGACATGGCTTGTGTACAGAGCCCTCCTaGCATGGTCATAGACCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QSYYSYSLQYCSLWGHGLCTEPS*HGHRPL Trigger: AAGAGGTCTATGACCATGCCAGGAGGGCTCTGTACA...CAAGCCATGTCCCCACAAGCTGCAGTATTGTAAACTATAAGAATAATAACTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| CDS-3UTR TCA 90 bp | CAAAGTTATTATTCTTATAGTTTACAATACTGCAGCTTGTGGGGACATGGCTTGCTTTGGATGTTCTCTTaGTGTCGAAGACGTATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QSYYSYSLQYCSLWGHGLLWMFS*CRRRIS Trigger: AGAAATACGTCTTCGACATCAAGAGAACATCCAAAG...CAAGCCATGTCCCCACAAGCTGCAGTATTGTAAACTATAAGAATAATAACTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| CDS GCA 90 bp | TGTGGGTGGGCAGGTAGACGTGCTGGACATGCTCCACACGGGATCTaGAGACCGGACAGGACTGCAGCTGGGCTGCACAGCTCTCGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: CGWAGRRAGHAPHGI*RPDRTAAGLHSSRS Trigger: GCTGCGAGAGCTGTGCAGCCCAGCTGCAGTCCTGTCCGGTCTGCAGATCCCGTGTGGAGCATGTCCAGCACGTCTACCTGCCCACCCACA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
||
| CDS-3UTR CAA 90 bp | TCCGTGTCCCAGAGTTCTTCCTGGTGGCCATGGGGCCTGTTGCTTCTCCTCACGTCCACAACGCCGGCGTaGTACAGAGCCCTCCTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SVSQSSSWWPWGLLLLLTSTTPA*YRALLA Trigger: TGCCAGGAGGGCTCTGTACAACGCCGGCGTTGTGGA...CGTGAGGAGAAGCAACAGGCCCCATGGCCACCAGGAAGAACTCTGGGACACGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| CDS TCA 90 bp | AGCTCTCGCAGCACACAGTGTGGCCGCAGGGGCAGAAGGTGGAGTTaGTCTCCTCCTCGCAGCACGCCATACACAGCATGGCTTCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SSRSTQCGRRGRRWS*SPPRSTPYTAWLPS Trigger: TGAAGGAAGCCATGCTGTGTATGGCGTGCTGCGAGGAGGAGATCAACTCCACCTTCTGCCCCTGCGGCCACACTGTGTGCTGCGAGAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| CDS-3UTR CAA 90 bp | AGAGTTCTTCCTGGTGGCCATGGGGCCTGTTGCTTCTCCTCACGGAAGAGGTGTGGGCAGAAGGTGGAGTaGATCTCCTCCTCGCAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: RVLPGGHGACCFSSRKRCGQKVE*ISSSQH Trigger: GTGCTGCGAGGAGGAGATCAACTCCACCTTCTGCCC...ACACCTCTTCCGTGAGGAGAAGCAACAGGCCCCATGGCCACCAGGAAGAACTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| CDS TCA 90 bp | TGTTCTGGTTGTAGTCTCCAAATTTGGTCTGAGCCAGGAGGGCACTaGGTTCCACGGCCTGCTCTGGGGAACACTGGAGGTGGCCTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: CSGCSLQIWSEPGGH*VPRPALGNTGGGLP Trigger: TGGCAGGCCACCTCCAGTGTTCCCCAGAGCAGGCCGTGGAACTCAGTGCCCTCCTGGCTCAGACCAAATTTGGAGACTACAACCAGAACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
||
| CDS-3UTR CAA 90 bp | AGAGTTCTTCCTGGTGGCCATGGGGCCTGTTGCTTCTCCTCACGGAAGAGGTGTAGACAGTCCTCGCCGTaGGCTTTTGCCTCCACCTCT | + |
|
Preference number: 5 (lower is better) Translates to: RVLPGGHGACCFSSRKRCRQSSP*AFASTS Trigger: AGAGGTGGAGGCAAAAGCCAACGGCGAGGACTGTCT...ACACCTCTTCCGTGAGGAGAAGCAACAGGCCCCATGGCCACCAGGAAGAACTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038275.11 |
||
| CDS TCA 90 bp | GCTGTCCCTCACAGCATGCCACTCTATGCCGTAGTTCTCCATCGCTaGCACAATCTGCAGAACCTGGTACTCGGCAGAGGCCTGGCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: AVPHSMPLYAVVLHR*HNLQNLVLGRGLAD Trigger: ATCAGCCAGGCCTCTGCCGAGTACCAGGTTCTGCAGATTGTGTCAGCGATGGAGAACTACGGCATAGAGTGGCATGCTGTGAGGGACAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
||
| CDS GCA 90 bp | ACCTGGTACTCGGCAGAGGCCTGGCTGATGCCCTCCAGCTCCTTATaGTTCGCAACGATGCTGTTCAAAGTGGAGCTGGAGAGCTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: TWYSAEAWLMPSSSL*FATMLFKVELESSF Trigger: GAAAGAGCTCTCCAGCTCCACTTTGAACAGCATCGTTGCGAAGCATAAGGAGCTGGAGGGCATCAGCCAGGCCTCTGCCGAGTACCAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
||
| CDS CCA 90 bp | AAATTTGGTCTGAGCCAGGAGGGCACTGAGTTCCACGGCCTGCTCTaGGGAACACTGGAGGTGGCCTGCCAAGAGGGACTCTTTAATGTG | + |
|
Preference number: 5 (lower is better) Translates to: KFGLSQEGTEFHGLL*GTLEVACQEGLFNV Trigger: CACATTAAAGAGTCCCTCTTGGCAGGCCACCTCCAGTGTTCCCCAGAGCAGGCCGTGGAACTCAGTGCCCTCCTGGCTCAGACCAAATTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
||
| CDS CCA 90 bp | TCCATCGCTGACACAATCTGCAGAACCTGGTACTCGGCAGAGGCCTaGCTGATGCCCTCCAGCTCCTTATGCTTCGCAACGATGCTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SIADTICRTWYSAEA*LMPSSSLCFATMLF Trigger: GAACAGCATCGTTGCGAAGCATAAGGAGCTGGAGGGCATCAGCCAGGCCTCTGCCGAGTACCAGGTTCTGCAGATTGTGTCAGCGATGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
||
| CDS-3UTR CAA 90 bp | TGGAAGACACCGAGGGGGCAGGACAATGAGTATGGAAGCACTGACATAGGAAAACGCCTGCACACCTGGTaGAGACAGTCCTCGCCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: WKTPRGQDNEYGSTDIGKRLHTW*RQSSPL Trigger: CAACGGCGAGGACTGTCTCAACCAGGTGTGCAGGCG...TTTTCCTATGTCAGTGCTTCCATACTCATTGTCCTGCCCCCTCGGTGTCTTCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038275.11 |
||
| CDS-3UTR CAA 90 bp | TCCCAGAGTTCTTCCTGGTGGCCATGGGGCCTGTTGCTTCTCCTCACGGAAGAGGTCCTCATAGCTGTATaGGGCGGTGTTCTGGTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: SQSSSWWPWGLLLLLTEEVLIAV*GGVLVV Trigger: TACAACCAGAACACCGCCCAATACAGCTATGAGGAC...CTCTTCCGTGAGGAGAAGCAACAGGCCCCATGGCCACCAGGAAGAACTCTGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
||
| CDS-3UTR CAA 90 bp | GTATTGCACCCGATGAGGTCAGCTAGGTTTCCTGACACCCTAGAAAACCCCCTAAGGAGCACGATGCTGTaGCCGGACTCCTTGGTGACG | + |
|
Preference number: 5 (lower is better) Translates to: VLHPMRSARFPDTLENPLRSTML*PDSLVT Trigger: CGTCACCAAGGAGTCCGGCAACAGCATCGTGCTCCT...TAGGGGGTTTTCTAGGGTGTCAGGAAACCTAGCTGACCTCATCGGGTGCAATAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038275.11 |
||
| CDS CCA 90 bp | AGGAGGGCACTGAGTTCCACGGCCTGCTCTGGGGAACACTGGAGGTaGCCTGCCAAGAGGGACTCTTTAATGTGCAAGAAAAAGATATGC | + |
|
Preference number: 5 (lower is better) Translates to: RRALSSTACSGEHWR*PAKRDSLMCKKKIC Trigger: GCATATCTTTTTCTTGCACATTAAAGAGTCCCTCTTGGCAGGCCACCTCCAGTGTTCCCCAGAGCAGGCCGTGGAACTCAGTGCCCTCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| CDS-3UTR CAA 90 bp | AACCCTAAAGTTCAAGGAATGTGTCCGTGTCCCAGAGTTCTTCCTGGTGGCCATAGGAGCACGATGCTGTaGCCGGACTCCTTGGTGACG | + |
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Preference number: 5 (lower is better) Translates to: NPKVQGMCPCPRVLPGGHRSTML*PDSLVT Trigger: CGTCACCAAGGAGTCCGGCAACAGCATCGTGCTCCT...ATGGCCACCAGGAAGAACTCTGGGACACGGACACATTCCTTGAACTTTAGGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| CDS GCA 90 bp | GGCACTGAGTTCCACGGCCTGCTCTGGGGAACACTGGAGGTGGCCTaGCAAGAGGGACTCTTTAATGTGCAAGAAAAAGATATGCCTTGT | + |
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Preference number: 5 (lower is better) Translates to: GTEFHGLLWGTLEVA*QEGLFNVQEKDMPC Trigger: ACAAGGCATATCTTTTTCTTGCACATTAAAGAGTCCCTCTTGGCAGGCCACCTCCAGTGTTCCCCAGAGCAGGCCGTGGAACTCAGTGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| CDS GCA 90 bp | ATAGAATGCATGTGTTTCGGTGATGGCTCGGTAGAGGCCGCTGGCTaGTCTGGTGCTGATCATCTTAAACAGGAGCACGATGCTGTTGCC | + |
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Preference number: 5 (lower is better) Translates to: IECMCFGDGSVEAAG*SGADHLKQEHDAVA Trigger: GGCAACAGCATCGTGCTCCTGTTTAAGATGATCAGCACCAGAGCAGCCAGCGGCCTCTACCGAGCCATCACCGAAACACATGCATTCTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| CDS-3UTR CAA 90 bp | GTTGCTTCTCCTCACGGAAGAGGTGTGGTCACATTCTTGTTTTCTTTTCCTCCTTCCACAACGCCGGCGTaGTACAGAGCCCTCCTGGCA | + |
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Preference number: 5 (lower is better) Translates to: VASPHGRGVVTFLFSFPPSTTPA*YRALLA Trigger: TGCCAGGAGGGCTCTGTACAACGCCGGCGTTGTGGA...AGGAGGAAAAGAAAACAAGAATGTGACCACACCTCTTCCGTGAGGAGAAGCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| CDS TCA 90 bp | GCTGTTGCCGGACTCCTTGGTGACGGTCAAGTAGACATTCTTTCCTaGCTGGGTGGCCATCTGCACCACAGGATAAGCTATCCTGTTAAT | + |
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Preference number: 5 (lower is better) Translates to: AVAGLLGDGQVDILS*LGGHLHHRISYPVN Trigger: ATTAACAGGATAGCTTATCCTGTGGTGCAGATGGCCACCCAGTCAGGAAAGAATGTCTACTTGACCGTCACCAAGGAGTCCGGCAACAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| CDS CCA 90 bp | TTCTTACCAAGGTTAATGTTTTCGTTCAGAAACAGAGACGCCAAGTaGCCCTTCAGGTCGCGACTGTACTGCATCATGACGGCACTGGTG | + |
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Preference number: 5 (lower is better) Translates to: FLPRLMFSFRNRDAK*PFRSRLYCIMTALV Trigger: CACCAGTGCCGTCATGATGCAGTACAGTCGCGACCTGAAGGGCCACTTGGCGTCTCTGTTTCTGAACGAAAACATTAACCTTGGTAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| CDS-3UTR CAA 90 bp | TTCTTTTCCTCCTTGTTTCTGAAAATGTCTCATGGCAGATGGGTGTTGAGAGTGGGGCAGAAGGTGGAGTaGATCTCCTCCTCGCAGCAC | + |
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Preference number: 5 (lower is better) Translates to: FFSSLFLKMSHGRWVLRVGQKVE*ISSSQH Trigger: GTGCTGCGAGGAGGAGATCAACTCCACCTTCTGCCC...CACTCTCAACACCCATCTGCCATGAGACATTTTCAGAAACAAGGAGGAAAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| CDS-3UTR CAA 90 bp | CAAAGTTATTATTCTTATAGTTTACAATACTGCAGCTTGTGGGGACATGGCTTGCCTCGCCGTTGGCTTTaGCCTCCACCTCTACCTCCA | + |
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Preference number: 5 (lower is better) Translates to: QSYYSYSLQYCSLWGHGLPRRWL*PPPLPP Trigger: TGGAGGTAGAGGTGGAGGCAAAAGCCAACGGCGAGG...CAAGCCATGTCCCCACAAGCTGCAGTATTGTAAACTATAAGAATAATAACTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038275.11 |
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| CDS-3UTR CAA 90 bp | CATGGGGCCTGTTGCTTCTCCTCACGGAAGAGGTGTGGTCACATTCTTGTTTTCTCTTTGGATGTTCTCTaGATGTCGAAGACGTATTTC | + |
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Preference number: 5 (lower is better) Translates to: HGACCFSSRKRCGHILVFSLDVL*MSKTYF Trigger: GAAATACGTCTTCGACATCAAGAGAACATCCAAAGA...GAAAACAAGAATGTGACCACACCTCTTCCGTGAGGAGAAGCAACAGGCCCCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| CDS-3UTR CAA 90 bp | TTCTTTTCCTCCTTGTTTCTGAAAATGTCTCATGGCAGATGGGTGTTGAGAGTGCAGATGACAGTCAGATaGAGGAGACTGGTGTGGGTG | + |
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Preference number: 5 (lower is better) Translates to: FFSSLFLKMSHGRWVLRVQMTVR*RRLVWV Trigger: CACCCACACCAGTCTCCTCAATCTGACTGTCATCTG...CACTCTCAACACCCATCTGCCATGAGACATTTTCAGAAACAAGGAGGAAAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| CDS-3UTR CAA 90 bp | CTGTTGCTTCTCCTCACGGAAGAGGTGTGGTCACATTCTTGTTTTCTTTTCCTCTCTTTGGATGTTCTCTaGATGTCGAAGACGTATTTC | + |
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Preference number: 5 (lower is better) Translates to: LLLLLTEEVWSHSCFLFLSLDVL*MSKTYF Trigger: GAAATACGTCTTCGACATCAAGAGAACATCCAAAGA...GAGGAAAAGAAAACAAGAATGTGACCACACCTCTTCCGTGAGGAGAAGCAACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| CDS-3UTR CAA 90 bp | CAAAGTTATTATTCTTATAGTTTACAATACTGCAGCTTGTGGGGACATGGCTTGGTCCTCATAGCTGTATaGGGCGGTGTTCTGGTTGTA | + |
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Preference number: 5 (lower is better) Translates to: QSYYSYSLQYCSLWGHGLVLIAV*GGVLVV Trigger: TACAACCAGAACACCGCCCAATACAGCTATGAGGAC...CAAGCCATGTCCCCACAAGCTGCAGTATTGTAAACTATAAGAATAATAACTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| CDS GCA 72 bp | ACGGGATCTGCAGACCGGACAGGACTGCAGCTGGGCTaGACAGCTCTCGCAGCACACAGTGTGGCCGCAGGG | + |
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Preference number: 6 (lower is better) Translates to: TGSADRTGLQLG*TALAAHSVAAG Trigger: CCCTGCGGCCACACTGTGTGCTGCGAGAGCTGTGCAGCCCAGCTGCAGTCCTGTCCGGTCTGCAGATCCCGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| CDS CCA 72 bp | CTGAGCCAGGAGGGCACTGAGTTCCACGGCCTGCTCTaGGGAACACTGGAGGTGGCCTGCCAAGAGGGACTC | + |
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Preference number: 6 (lower is better) Translates to: LSQEGTEFHGLL*GTLEVACQEGL Trigger: GAGTCCCTCTTGGCAGGCCACCTCCAGTGTTCCCCAGAGCAGGCCGTGGAACTCAGTGCCCTCCTGGCTCAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| CDS CCA 72 bp | TCCACACGGGATCTGCAGACCGGACAGGACTGCAGCTaGGCTGCACAGCTCTCGCAGCACACAGTGTGGCCG | + |
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Preference number: 6 (lower is better) Translates to: STRDLQTGQDCS*AAQLSQHTVWP Trigger: CGGCCACACTGTGTGCTGCGAGAGCTGTGCAGCCCAGCTGCAGTCCTGTCCGGTCTGCAGATCCCGTGTGGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| CDS GCA 72 bp | GCAGGTAGACGTGCTGGACATGCTCCACACGGGATCTaGAGACCGGACAGGACTGCAGCTGGGCTGCACAGC | + |
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Preference number: 6 (lower is better) Translates to: AGRRAGHAPHGI*RPDRTAAGLHS Trigger: GCTGTGCAGCCCAGCTGCAGTCCTGTCCGGTCTGCAGATCCCGTGTGGAGCATGTCCAGCACGTCTACCTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| CDS CAA 90 bp | CAGCTCTCGCAGCACACAGTGTGGCCGCAGGGGCAGAAGGTGGAGTaGATCTCCTCCTCGCAGCACGCCATACACAGCATGGCTTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: QLSQHTVWPQGQKVE*ISSSQHAIHSMASF Trigger: GAAGGAAGCCATGCTGTGTATGGCGTGCTGCGAGGAGGAGATCAACTCCACCTTCTGCCCCTGCGGCCACACTGTGTGCTGCGAGAGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| CDS CAA 72 bp | AGACGCCTGCACACCTGGTTGAGACAGTCCTCGCCGTaGGCTTTTGCCTCCACCTCTACCTCCATCAGCACC | + |
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Preference number: 6 (lower is better) Translates to: RRLHTWLRQSSP*AFASTSTSIST Trigger: GGTGCTGATGGAGGTAGAGGTGGAGGCAAAAGCCAACGGCGAGGACTGTCTCAACCAGGTGTGCAGGCGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038275.11 |
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| CDS TCA 72 bp | CAATCTGCAGAACCTGGTACTCGGCAGAGGCCTGGCTaGTGCCCTCCAGCTCCTTATGCTTCGCAACGATGC | + |
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Preference number: 6 (lower is better) Translates to: QSAEPGTRQRPG*CPPAPYASQRC Trigger: GCATCGTTGCGAAGCATAAGGAGCTGGAGGGCATCAGCCAGGCCTCTGCCGAGTACCAGGTTCTGCAGATTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| CDS GCA 72 bp | TCGGCAGAGGCCTGGCTGATGCCCTCCAGCTCCTTATaGTTCGCAACGATGCTGTTCAAAGTGGAGCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: SAEAWLMPSSSL*FATMLFKVELE Trigger: CTCCAGCTCCACTTTGAACAGCATCGTTGCGAAGCATAAGGAGCTGGAGGGCATCAGCCAGGCCTCTGCCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| CDS CCA 72 bp | GACACAATCTGCAGAACCTGGTACTCGGCAGAGGCCTaGCTGATGCCCTCCAGCTCCTTATGCTTCGCAACG | + |
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Preference number: 6 (lower is better) Translates to: DTICRTWYSAEA*LMPSSSLCFAT Trigger: CGTTGCGAAGCATAAGGAGCTGGAGGGCATCAGCCAGGCCTCTGCCGAGTACCAGGTTCTGCAGATTGTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| CDS TCA 72 bp | TGTAGTCTCCAAATTTGGTCTGAGCCAGGAGGGCACTaGGTTCCACGGCCTGCTCTGGGGAACACTGGAGGT | + |
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Preference number: 6 (lower is better) Translates to: CSLQIWSEPGGH*VPRPALGNTGG Trigger: ACCTCCAGTGTTCCCCAGAGCAGGCCGTGGAACTCAGTGCCCTCCTGGCTCAGACCAAATTTGGAGACTACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| CDS GCA 72 bp | AGAGACGCCAAGTGGCCCTTCAGGTCGCGACTGTACTaGATCATGACGGCACTGGTGACTGTGTCACACCTA | + |
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Preference number: 6 (lower is better) Translates to: RDAKWPFRSRLY*IMTALVTVSHL Trigger: TAGGTGTGACACAGTCACCAGTGCCGTCATGATGCAGTACAGTCGCGACCTGAAGGGCCACTTGGCGTCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| CDS TCA 72 bp | CACAGCATGCCACTCTATGCCGTAGTTCTCCATCGCTaGCACAATCTGCAGAACCTGGTACTCGGCAGAGGC | + |
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Preference number: 6 (lower is better) Translates to: HSMPLYAVVLHR*HNLQNLVLGRG Trigger: GCCTCTGCCGAGTACCAGGTTCTGCAGATTGTGTCAGCGATGGAGAACTACGGCATAGAGTGGCATGCTGTG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| CDS CCA 72 bp | CTGAGTTCCACGGCCTGCTCTGGGGAACACTGGAGGTaGCCTGCCAAGAGGGACTCTTTAATGTGCAAGAAA | + |
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Preference number: 6 (lower is better) Translates to: LSSTACSGEHWR*PAKRDSLMCKK Trigger: TTTCTTGCACATTAAAGAGTCCCTCTTGGCAGGCCACCTCCAGTGTTCCCCAGAGCAGGCCGTGGAACTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| CDS GCA 72 bp | ATGTGTTTCGGTGATGGCTCGGTAGAGGCCGCTGGCTaGTCTGGTGCTGATCATCTTAAACAGGAGCACGAT | + |
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Preference number: 6 (lower is better) Translates to: MCFGDGSVEAAG*SGADHLKQEHD Trigger: ATCGTGCTCCTGTTTAAGATGATCAGCACCAGAGCAGCCAGCGGCCTCTACCGAGCCATCACCGAAACACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| CDS TCA 72 bp | CTTTACAGATCGAGATGCCTTCAGGTCCGACCCCAATaGGGAGTTTCTGTCCTTCGCTGTCCCTCACAGCAT | + |
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Preference number: 6 (lower is better) Translates to: LYRSRCLQVRPQ*GVSVLRCPSQH Trigger: ATGCTGTGAGGGACAGCGAAGGACAGAAACTCCTCATTGGGGTCGGACCTGAAGGCATCTCGATCTGTAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| CDS GCA 72 bp | CACAAAGAACTTGACCCTCAGTTTAAGGCGGTAAGGTaGCAGCCCATCCATCTGCTGGGAGATCCGGTTTCT | + |
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Preference number: 6 (lower is better) Translates to: HKELDPQFKAVR*QPIHLLGDPVS Trigger: AGAAACCGGATCTCCCAGCAGATGGATGGGCTGGCACCTTACCGCCTTAAACTGAGGGTCAAGTTCTTTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038275.11 |
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| CDS CAA 90 bp | AGTGGAGCTGGAGAGCTCTTTCTCACACAGGTCCTCATAGCTGTATaGGGCGGTGTTCTGGTTGTAGTCTCCAAATTTGGTCTGAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: SGAGELFLTQVLIAV*GGVLVVVSKFGLSQ Trigger: CTGGCTCAGACCAAATTTGGAGACTACAACCAGAACACCGCCCAATACAGCTATGAGGACCTGTGTGAGAAAGAGCTCTCCAGCTCCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| CDS CCA 72 bp | CCAGCTCCTTATGCTTCGCAACGATGCTGTTCAAAGTaGAGCTGGAGAGCTCTTTCTCACACAGGTCCTCAT | + |
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Preference number: 6 (lower is better) Translates to: PAPYASQRCCSK*SWRALSHTGPH Trigger: ATGAGGACCTGTGTGAGAAAGAGCTCTCCAGCTCCACTTTGAACAGCATCGTTGCGAAGCATAAGGAGCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| CDS CCA 72 bp | CCTTATGCTTCGCAACGATGCTGTTCAAAGTGGAGCTaGAGAGCTCTTTCTCACACAGGTCCTCATAGCTGT | + |
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Preference number: 6 (lower is better) Translates to: PYASQRCCSKWS*RALSHTGPHSC Trigger: ACAGCTATGAGGACCTGTGTGAGAAAGAGCTCTCCAGCTCCACTTTGAACAGCATCGTTGCGAAGCATAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| CDS CAA 72 bp | GGAGAGCTCTTTCTCACACAGGTCCTCATAGCTGTATaGGGCGGTGTTCTGGTTGTAGTCTCCAAATTTGGT | + |
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Preference number: 6 (lower is better) Translates to: GELFLTQVLIAV*GGVLVVVSKFG Trigger: ACCAAATTTGGAGACTACAACCAGAACACCGCCCAATACAGCTATGAGGACCTGTGTGAGAAAGAGCTCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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| CDS TCA 72 bp | AAAAAGATATGCCTTGTCTGCTCCTGTAAGATGAGATaGGGCTCCACAAAGAACTTGACCCTCAGTTTAAGG | + |
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Preference number: 6 (lower is better) Translates to: KKICLVCSCKMR*GSTKNLTLSLR Trigger: CCTTAAACTGAGGGTCAAGTTCTTTGTGGAGCCTCATCTCATCTTACAGGAGCAGACAAGGCATATCTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038275.11 ENSMUST00000222178.2 |
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