Pregenerated sensors for MYL9 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000067818

Ensembl transcript IDs: ENSMUST00000088552.7

Found 25 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR CCA 90 bp	ACACGGGTGCTTCCTTCCTCAGGCCAGCCCGGGAATGGGAGGGCATaGCTGAGTGCTATCTTCAGTGGCTTTACCTTGGTGCTTGCTGGC	+
Preference number: 1 (lower is better) Translates to: TRVLPSSGQPGNGRA*LSAIFSGFTLVLAG Trigger: GCCAGCAAGCACCAAGGTAAAGCCACTGAAGATAGCACTCAGCCATGCCCTCCCATTCCCGGGCTGGCCTGAGGAAGGAAGCACCCGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088552.7
3UTR GCA 90 bp	CCTTGTATTAAGAGACTGTCCCTCAGGCAGCTTCCCTTCCCTCAATaGATTCTGGGGGTGCTGAGACAACTCCACAAGCCTAAGAGCAGA	+
Preference number: 1 (lower is better) Translates to: PCIKRLSLRQLPFPQ*ILGVLRQLHKPKSR Trigger: TCTGCTCTTAGGCTTGTGGAGTTGTCTCAGCACCCCCAGAATGCATTGAGGGAAGGGAAGCTGCCTGAGGGACAGTCTCTTAATACAAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088552.7
3UTR CCA 90 bp	ACAAGCCTAAGAGCAGACTGTCATCCTCTGAAGGGACATGGTGAATaGGTGTGTACCTTTGTGGGGATGCTGGGAATTAGTGTCCGACAC	+
Preference number: 1 (lower is better) Translates to: TSLRADCHPLKGHGE*VCTFVGMLGISVRH Trigger: GTGTCGGACACTAATTCCCAGCATCCCCACAAAGGTACACACCCATTCACCATGTCCCTTCAGAGGATGACAGTCTGCTCTTAGGCTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088552.7
3UTR-3UTR TCA 90 bp	TGGTGCTTGCTGGCCCCACCCTCGGCTCACCTCCCCACTGTGGTCCCTCCTTGTTGTTGGGGAGGTAGGTaGCTGGGATGGGGTCTAGGC	+
Preference number: 2 (lower is better) Translates to: WCLLAPPSAHLPTVVPPCCWGGR*LGWGLG Trigger: GCCTAGACCCCATCCCAGTCACCTACCTCCCCAACA...ACAAGGAGGGACCACAGTGGGGAGGTGAGCCGAGGGTGGGGCCAGCAAGCACCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000088552.7
3UTR-3UTR CCA 90 bp	GTGAATGGGTGTGTACCTTTGTGGGGATGCTGGGAATTAGTGTCCGACACCAGAAGGCCAGCCCGGGAATaGGAGGGCATGGCTGAGTGC	+
Preference number: 2 (lower is better) Translates to: VNGCVPLWGCWELVSDTRRPARE*EGMAEC Trigger: GCACTCAGCCATGCCCTCCCATTCCCGGGCTGGCCT...TCTGGTGTCGGACACTAATTCCCAGCATCCCCACAAAGGTACACACCCATTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088552.7
3UTR-3UTR CCA 90 bp	AGTGCTATCTTCAGTGGCTTTACCTTGGTGCTTGCTGGCCCCACCCTCGGCTCAACCTGCCTCACCCTGTaGGTCTTACGGTTCAGTTCC	+
Preference number: 2 (lower is better) Translates to: SAIFSGFTLVLAGPTLGSTCLTL*VLRFSS Trigger: GGAACTGAACCGTAAGACCCACAGGGTGAGGCAGGT...TGAGCCGAGGGTGGGGCCAGCAAGCACCAAGGTAAAGCCACTGAAGATAGCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088552.7
3UTR-3UTR CCA 90 bp	CAGCCTTGTATTAAGAGACTGTCCCTCAGGCAGCTTCCCTTCCCTCAATGCATTGGGAATGGGAGGGCATaGCTGAGTGCTATCTTCAGT	+
Preference number: 2 (lower is better) Translates to: QPCIKRLSLRQLPFPQCIGNGRA*LSAIFS Trigger: ACTGAAGATAGCACTCAGCCATGCCCTCCCATTCCC...AATGCATTGAGGGAAGGGAAGCTGCCTGAGGGACAGTCTCTTAATACAAGGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088552.7
3UTR GCA 72 bp	GCTGAGTGCTATCTTCAGTGGCTTTACCTTGGTGCTTaGTGGCCCCACCCTCGGCTCACCTCCCCACTGTGG	+
Preference number: 3 (lower is better) Translates to: AECYLQWLYLGA*WPHPRLTSPLW Trigger: CCACAGTGGGGAGGTGAGCCGAGGGTGGGGCCAGCAAGCACCAAGGTAAAGCCACTGAAGATAGCACTCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088552.7
3UTR CCA 72 bp	GAGTGCTATCTTCAGTGGCTTTACCTTGGTGCTTGCTaGCCCCACCCTCGGCTCACCTCCCCACTGTGGTCC	+
Preference number: 3 (lower is better) Translates to: ECYLQWLYLGAC*PHPRLTSPLWS Trigger: GGACCACAGTGGGGAGGTGAGCCGAGGGTGGGGCCAGCAAGCACCAAGGTAAAGCCACTGAAGATAGCACTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088552.7
3UTR CCA 72 bp	CGGGAATGGGAGGGCATGGCTGAGTGCTATCTTCAGTaGCTTTACCTTGGTGCTTGCTGGCCCCACCCTCGG	+
Preference number: 3 (lower is better) Translates to: REWEGMAECYLQ*LYLGACWPHPR Trigger: CCGAGGGTGGGGCCAGCAAGCACCAAGGTAAAGCCACTGAAGATAGCACTCAGCCATGCCCTCCCATTCCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088552.7
3UTR TCA 72 bp	CTTCCTCAGGCCAGCCCGGGAATGGGAGGGCATGGCTaGGTGCTATCTTCAGTGGCTTTACCTTGGTGCTTG	+
Preference number: 3 (lower is better) Translates to: LPQASPGMGGHG*VLSSVALPWCL Trigger: CAAGCACCAAGGTAAAGCCACTGAAGATAGCACTCAGCCATGCCCTCCCATTCCCGGGCTGGCCTGAGGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088552.7
3UTR GCA 72 bp	AAGAGACTGTCCCTCAGGCAGCTTCCCTTCCCTCAATaGATTCTGGGGGTGCTGAGACAACTCCACAAGCCT	+
Preference number: 3 (lower is better) Translates to: KRLSLRQLPFPQ*ILGVLRQLHKP Trigger: AGGCTTGTGGAGTTGTCTCAGCACCCCCAGAATGCATTGAGGGAAGGGAAGCTGCCTGAGGGACAGTCTCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088552.7
3UTR TCA 72 bp	GGCAGCTTCCCTTCCCTCAATGCATTCTGGGGGTGCTaGGACAACTCCACAAGCCTAAGAGCAGACTGTCAT	+
Preference number: 3 (lower is better) Translates to: GSFPSLNAFWGC*DNSTSLRADCH Trigger: ATGACAGTCTGCTCTTAGGCTTGTGGAGTTGTCTCAGCACCCCCAGAATGCATTGAGGGAAGGGAAGCTGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088552.7
3UTR CCA 72 bp	GACATGGTGAATGGGTGTGTACCTTTGTGGGGATGCTaGGAATTAGTGTCCGACACCAGAACACGGGTGCTT	+
Preference number: 3 (lower is better) Translates to: DMVNGCVPLWGC*ELVSDTRTRVL Trigger: AAGCACCCGTGTTCTGGTGTCGGACACTAATTCCCAGCATCCCCACAAAGGTACACACCCATTCACCATGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088552.7
3UTR TCA 72 bp	CCTAAGAGCAGACTGTCATCCTCTGAAGGGACATGGTaGATGGGTGTGTACCTTTGTGGGGATGCTGGGAAT	+
Preference number: 3 (lower is better) Translates to: PKSRLSSSEGTW*MGVYLCGDAGN Trigger: ATTCCCAGCATCCCCACAAAGGTACACACCCATTCACCATGTCCCTTCAGAGGATGACAGTCTGCTCTTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088552.7
CDS-3UTR TCA 90 bp	TTCAGTGGCTTTACCTTGGTGCTTGCTGGCCCCACCCTCGGCTCACCTCCCCACGGTGGTCCTCGTGGATaGAGCCTGAGGCCTCCTCAT	+
Preference number: 4 (lower is better) Translates to: FSGFTLVLAGPTLGSPPHGGPRG*SLRPPH Trigger: ATGAGGAGGCCTCAGGCTTCATCCACGAGGACCACC...GTGGGGAGGTGAGCCGAGGGTGGGGCCAGCAAGCACCAAGGTAAAGCCACTGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088552.7
CDS-3UTR GCA 90 bp	TTGGTGCTTGCTGGCCCCACCCTCGGCTCACCTCCCCACTGTGGTCCCTCCTTGGAGGCCAGCATGTCGTaGAGGTCCTCCTTATCAATG	+
Preference number: 4 (lower is better) Translates to: LVLAGPTLGSPPHCGPSLEASMS*RSSLSM Trigger: CATTGATAAGGAGGACCTGCACGACATGCTGGCCTC...CAAGGAGGGACCACAGTGGGGAGGTGAGCCGAGGGTGGGGCCAGCAAGCACCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088552.7
CDS-3UTR CCA 90 bp	GTGGCTTTACCTTGGTGCTTGCTGGCCCCACCCTCGGCTCACCTCCCCACTGTGCCAGATACTCGTCTGTaGGGTTCTTCCCCAGAGAGG	+
Preference number: 4 (lower is better) Translates to: VALPWCLLAPPSAHLPTVPDTRL*GSSPER Trigger: CCTCTCTGGGGAAGAACCCCACAGACGAGTATCTGG...CACAGTGGGGAGGTGAGCCGAGGGTGGGGCCAGCAAGCACCAAGGTAAAGCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000088552.7
CDS-3UTR TCA 90 bp	GTGGCTTTACCTTGGTGCTTGCTGGCCCCACCCTCGGCTCACCTCCCCACTGTGGGTCCTCCTTATCAATaGAGCCATCTCGGTTCTGAT	+
Preference number: 4 (lower is better) Translates to: VALPWCLLAPPSAHLPTVGPPYQ*SHLGSD Trigger: ATCAGAACCGAGATGGCTTCATTGATAAGGAGGACC...CACAGTGGGGAGGTGAGCCGAGGGTGGGGCCAGCAAGCACCAAGGTAAAGCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088552.7
CDS-3UTR TCA 90 bp	TGGGCCCATTGTAGAGCACCTGCCTCACCCTGTGGGTCTTACGGTTCAGTTCCGCTCGTGGATGAAGCCTaGGGCCTCCTCATCAAAGCA	+
Preference number: 4 (lower is better) Translates to: WAHCRAPASPCGSYGSVPLVDEA*GLLIKA Trigger: TGCTTTGATGAGGAGGCCTCAGGCTTCATCCACGAG...CGGAACTGAACCGTAAGACCCACAGGGTGAGGCAGGTGCTCTACAATGGGCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088552.7
CDS-3UTR CCA 90 bp	AGTGCTATCTTCAGTGGCTTTACCTTGGTGCTTGCTGGCCCCACCCTCGGCTCATTGGACGTAGCCCTCTaGGGCCTCTTCTTGGTGGTC	+
Preference number: 4 (lower is better) Translates to: SAIFSGFTLVLAGPTLGSLDVAL*GLFLVV Trigger: GACCACCAAGAAGAGGCCCCAGAGGGCTACGTCCAA...TGAGCCGAGGGTGGGGCCAGCAAGCACCAAGGTAAAGCCACTGAAGATAGCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088552.7
CDS-3UTR TCA 90 bp	CAGCCTTGTATTAAGAGACTGTCCCTCAGGCAGCTTCCCTTCCCTCAATGCATTCCACCTCCTCATCCGTaGATCGGTCGCCCATGGTGG	+
Preference number: 4 (lower is better) Translates to: QPCIKRLSLRQLPFPQCIPPPHP*IGRPWW Trigger: CCACCATGGGCGACCGATTCACGGATGAGGAGGTGG...AATGCATTGAGGGAAGGGAAGCTGCCTGAGGGACAGTCTCTTAATACAAGGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088552.7
CDS-3UTR CCA 90 bp	GTGAATGGGTGTGTACCTTTGTGGGGATGCTGGGAATTAGTGTCCGACACCAGAAGCAGCTCCCTCAGGTaGTCCTCGTGGATGAAGCCT	+
Preference number: 4 (lower is better) Translates to: VNGCVPLWGCWELVSDTRSSSLR*SSWMKP Trigger: AGGCTTCATCCACGAGGACCACCTGAGGGAGCTGCT...TCTGGTGTCGGACACTAATTCCCAGCATCCCCACAAAGGTACACACCCATTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088552.7
CDS-3UTR CAA 90 bp	GTGAATGGGTGTGTACCTTTGTGGGGATGCTGGGAATTAGTGTCCGACACCAGAAAGCAGGCAAAGGCATaGCGGATCACATCCTCGGGG	+
Preference number: 5 (lower is better) Translates to: VNGCVPLWGCWELVSDTRKQAKA*RITSSG Trigger: CCCCGAGGATGTGATCCGCAATGCCTTTGCCTGCTT...TCTGGTGTCGGACACTAATTCCCAGCATCCCCACAAAGGTACACACCCATTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088552.7
CDS-3UTR CAA 90 bp	AGGGACATGGTGAATGGGTGTGTACCTTTGTGGGGATGCTGGGAATTAGTGTCCTCCTTGGCGCCGTGTTaGAGGATGCGAGTGAACTCC	+
Preference number: 5 (lower is better) Translates to: RDMVNGCVPLWGCWELVSSLAPC*RMRVNS Trigger: GGAGTTCACTCGCATCCTCAAACACGGCGCCAAGGA...GGACACTAATTCCCAGCATCCCCACAAAGGTACACACCCATTCACCATGTCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088552.7