Pregenerated sensors for MYL6B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039824Ensembl transcript IDs: ENSMUST00000026428.4
Found 16 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 72 bp | ACTGCCTGCGCTTCTATCTGGTGGATCGAGGACCCTTaGCTCTCAAGCGGATACCAGGGGCTGGCTGGAGGG | + |
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Preference number: 3 (lower is better) Translates to: TACASIWWIEDP*LSSGYQGLAGG Trigger: CCCTCCAGCCAGCCCCTGGTATCCGCTTGAGAGGCAAGGGTCCTCGATCCACCAGATAGAAGCGCAGGCAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026428.4 |
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| CDS-3UTR CCA 90 bp | GACCCTTGCCTCTCAAGCGGATACCAGGGGCTGGCTGGAGGGCCACCTGCGGAGCAGCCGGCTCAGCCTTaGCCTTGGCTAGAGGGGTCC | + |
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Preference number: 4 (lower is better) Translates to: DPCLSSGYQGLAGGPPAEQPAQP*PWLEGS Trigger: GGACCCCTCTAGCCAAGGCCAAGGCTGAGCCGGCTG...CTCCGCAGGTGGCCCTCCAGCCAGCCCCTGGTATCCGCTTGAGAGGCAAGGGTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026428.4 |
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| CDS-3UTR CCA 90 bp | GATCGAGGACCCTTGCCTCTCAAGCGGATACCAGGGGCTGGCTGGAGGGCCACCGCTCAGCCTTGGCCTTaGCTAGAGGGGTCCCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: DRGPLPLKRIPGAGWRATAQPWP*LEGSLV Trigger: CACCAGGGACCCCTCTAGCCAAGGCCAAGGCTGAGC...GGTGGCCCTCCAGCCAGCCCCTGGTATCCGCTTGAGAGGCAAGGGTCCTCGATC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026428.4 |
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| CDS-3UTR CCA 90 bp | GATCGAGGACCCTTGCCTCTCAAGCGGATACCAGGGGCTGGCTGGAGGGCCACCTCAACAGGGGGCTCCTaGGATTTTGCAGGTGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: DRGPLPLKRIPGAGWRATSTGGS*DFAGAW Trigger: CCAGGCACCTGCAAAATCCCAGGAGCCCCCTGTTGA...GGTGGCCCTCCAGCCAGCCCCTGGTATCCGCTTGAGAGGCAAGGGTCCTCGATC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026428.4 |
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| CDS-3UTR TCA 90 bp | GATCGAGGACCCTTGCCTCTCAAGCGGATACCAGGGGCTGGCTGGAGGGCCACCGCTCAAAGGCCTCTCTaGATTCCTCCAGCTGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: DRGPLPLKRIPGAGWRATAQRPL*IPPAGP Trigger: AGGACCAGCTGGAGGAATTCAGAGAGGCCTTTGAGC...GGTGGCCCTCCAGCCAGCCCCTGGTATCCGCTTGAGAGGCAAGGGTCCTCGATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026428.4 |
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| CDS-3UTR GCA 90 bp | TGGTGGATCGAGGACCCTTGCCTCTCAAGCGGATACCAGGGGCTGGCTGGAGGGAGAGATGGAGGGCCCTaGTGGTTTCTTCACGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: WWIEDPCLSSGYQGLAGGRDGGP*WFLHGS Trigger: GCTCCCGTGAAGAAACCAGCAGGGCCCTCCATCTCT...CCCTCCAGCCAGCCCCTGGTATCCGCTTGAGAGGCAAGGGTCCTCGATCCACCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026428.4 |
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| CDS-3UTR CCA 90 bp | CTGGTGGATCGAGGACCCTTGCCTCTCAAGCGGATACCAGGGGCTGGCTGGAGGGATGGAGGGCCCTGCTaGTTTCTTCACGGGAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: LVDRGPLPLKRIPGAGWRDGGPC*FLHGSI Trigger: GATGCTCCCGTGAAGAAACCAGCAGGGCCCTCCATC...CCTCCAGCCAGCCCCTGGTATCCGCTTGAGAGGCAAGGGTCCTCGATCCACCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026428.4 |
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| 3UTR CAA 72 bp | CACTGCCTGCGCTTCTATCTGGTGGATCGAGGACCCTaGCCTCTCAAGCGGATACCAGGGGCTGGCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: HCLRFYLVDRGP*PLKRIPGAGWR Trigger: CCTCCAGCCAGCCCCTGGTATCCGCTTGAGAGGCAAGGGTCCTCGATCCACCAGATAGAAGCGCAGGCAGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026428.4 |
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| CDS-3UTR TCA 90 bp | TGGTGGATCGAGGACCCTTGCCTCTCAAGCGGATACCAGGGGCTGGCTGGAGGGGGAAGGCCTCATAGTTaGTGCAGCCGTTGCTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: WWIEDPCLSSGYQGLAGGGRPHS*CSRCCP Trigger: AGGACAGCAACGGCTGCATCAACTATGAGGCCTTCC...CCCTCCAGCCAGCCCCTGGTATCCGCTTGAGAGGCAAGGGTCCTCGATCCACCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026428.4 |
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| CDS-3UTR GCA 90 bp | GACCCTTGCCTCTCAAGCGGATACCAGGGGCTGGCTGGAGGGCCACCTGCGGAGAACATGTCTGAGCTCTaGACCCATGACCTTGCCGTT | + |
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Preference number: 4 (lower is better) Translates to: DPCLSSGYQGLAGGPPAENMSEL*THDLAV Trigger: AACGGCAAGGTCATGGGTGCAGAGCTCAGACATGTT...CTCCGCAGGTGGCCCTCCAGCCAGCCCCTGGTATCCGCTTGAGAGGCAAGGGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026428.4 |
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| CDS-3UTR CCA 90 bp | GACCCTTGCCTCTCAAGCGGATACCAGGGGCTGGCTGGAGGGCCACCTGCGGAGACTCGATCACCACTTTaGAGAGATCAACAGGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: DPCLSSGYQGLAGGPPAETRSPL*RDQQGA Trigger: AGCCCCCTGTTGATCTCTCCAAAGTGGTGATCGAGT...CTCCGCAGGTGGCCCTCCAGCCAGCCCCTGGTATCCGCTTGAGAGGCAAGGGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026428.4 |
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| CDS-3UTR CAA 90 bp | GACCCTTGCCTCTCAAGCGGATACCAGGGGCTGGCTGGAGGGCCACCTGCGGAGGGCTCAGCCTTGGCCTaGGCTAGAGGGGTCCCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: DPCLSSGYQGLAGGPPAEGSALA*ARGVPG Trigger: ACCAGGGACCCCTCTAGCCAAGGCCAAGGCTGAGCC...CTCCGCAGGTGGCCCTCCAGCCAGCCCCTGGTATCCGCTTGAGAGGCAAGGGTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026428.4 |
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| CDS-3UTR CAA 90 bp | CTGGTGGATCGAGGACCCTTGCCTCTCAAGCGGATACCAGGGGCTGGCTGGAGGGCAGCCGGCTCAGCCTaGGCCTTGGCTAGAGGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LVDRGPLPLKRIPGAGWRAAGSA*ALARGV Trigger: GACCCCTCTAGCCAAGGCCAAGGCTGAGCCGGCTGC...CCTCCAGCCAGCCCCTGGTATCCGCTTGAGAGGCAAGGGTCCTCGATCCACCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026428.4 |
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| CDS-3UTR CAA 90 bp | GACCCTTGCCTCTCAAGCGGATACCAGGGGCTGGCTGGAGGGCCACCTGCGGAGCCTTGGTCCCGGTTCTaGGCCACTGCCTGCAGCATG | + |
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Preference number: 5 (lower is better) Translates to: DPCLSSGYQGLAGGPPAEPWSRF*ATACSM Trigger: CATGCTGCAGGCAGTGGCCAAGAACCGGGACCAAGG...CTCCGCAGGTGGCCCTCCAGCCAGCCCCTGGTATCCGCTTGAGAGGCAAGGGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026428.4 |
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| CDS-3UTR CAA 90 bp | GACCCTTGCCTCTCAAGCGGATACCAGGGGCTGGCTGGAGGGCCACCTGCGGAGTTGCCGTTGCCCTCTTaGTCAAACACACGAAGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: DPCLSSGYQGLAGGPPAELPLPS*SNTRSP Trigger: GGGGCTTCGTGTGTTTGACAAAGAGGGCAACGGCAA...CTCCGCAGGTGGCCCTCCAGCCAGCCCCTGGTATCCGCTTGAGAGGCAAGGGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026428.4 |
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| CDS-3UTR CAA 90 bp | GATCGAGGACCCTTGCCTCTCAAGCGGATACCAGGGGCTGGCTGGAGGGCCACCAACTCGATCACCACTTaGGAGAGATCAACAGGGGGC | + |
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Preference number: 5 (lower is better) Translates to: DRGPLPLKRIPGAGWRATNSITT*ERSTGG Trigger: GCCCCCTGTTGATCTCTCCAAAGTGGTGATCGAGTT...GGTGGCCCTCCAGCCAGCCCCTGGTATCCGCTTGAGAGGCAAGGGTCCTCGATC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026428.4 |
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