Pregenerated sensors for MYL6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000090841Ensembl transcript IDs: ENSMUST00000164181.2, ENSMUST00000217733.2, ENSMUST00000217776.2, ENSMUST00000217969.2, ENSMUST00000218127.2, ENSMUST00000219236.2, ENSMUST00000220307.2, ENSMUST00000220427.2
Found 31 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGAGAGGCGGAGTCAGCCGAGGAGAGGGCTGGGGAGGGGTACCCATaGGCCAGGAGACCACGAGACCATGAAGGTGGCAGGAGGGAACAT | + |
|
Preference number: 1 (lower is better) Translates to: REAESAEERAGEGYP*ARRPRDHEGGRREH Trigger: ATGTTCCCTCCTGCCACCTTCATGGTCTCGTGGTCTCCTGGCCCATGGGTACCCCTCCCCAGCCCTCTCCTCGGCTGACTCCGCCTCTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217733.2 |
||
| 3UTR CCA 90 bp | AGGTGCTGTGACAGGGGAGCCTCTGGAGCCACACAGAAATCACACTaGGCAAGGAACAGACTCGGGATACAGAATGTCCTCAGCCATTCA | + |
|
Preference number: 1 (lower is better) Translates to: RCCDRGASGATQKSH*ARNRLGIQNVLSHS Trigger: TGAATGGCTGAGGACATTCTGTATCCCGAGTCTGTTCCTTGCCCAGTGTGATTTCTGTGTGGCTCCAGAGGCTCCCCTGTCACAGCACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000217733.2 ENSMUST00000218127.2 ENSMUST00000219236.2 |
||
| 3UTR CCA 90 bp | CACCTACAGTTATGGTCAGCCACTGGCAGGAGGAGAGGTCAGCTTTaGGTTAGGGTACCTCCACGCTGTCCAGTAGAGGGATGGAAAAAG | + |
|
Preference number: 1 (lower is better) Translates to: HLQLWSATGRRRGQL*VRVPPRCPVEGWKK Trigger: CTTTTTCCATCCCTCTACTGGACAGCGTGGAGGTACCCTAACCCAAAGCTGACCTCTCCTCCTGCCAGTGGCTGACCATAACTGTAGGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217733.2 |
||
| 3UTR TCA 90 bp | GCCAACTCTAGAATCACCATCAGACCAGCCTTCCCTACAAGCTGGTaGGCGTTCCCAGACACCAGCACCAAGACCCCTGTAAGTCAAATC | + |
|
Preference number: 1 (lower is better) Translates to: ANSRITIRPAFPTSW*AFPDTSTKTPVSQI Trigger: GATTTGACTTACAGGGGTCTTGGTGCTGGTGTCTGGGAACGCTCACCAGCTTGTAGGGAAGGCTGGTCTGATGGTGATTCTAGAGTTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217733.2 |
||
| 3UTR GCA 90 bp | CTGCATTCCTCATTGAGGAATTTCTCCCCTCCCAAGCCAGCTCCATaGAGAGTCATGCCAGGAGTAAGGCAGATGGTAGTAGGGTATGGC | + |
|
Preference number: 1 (lower is better) Translates to: LHSSLRNFSPPKPAP*RVMPGVRQMVVGYG Trigger: GCCATACCCTACTACCATCTGCCTTACTCCTGGCATGACTCTGCATGGAGCTGGCTTGGGAGGGGAGAAATTCCTCAATGAGGAATGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217733.2 |
||
| 3UTR CCA 90 bp | AATGGTGAAGACAAGACACAGACATGGGGTGAAGGGGTCAGGCAGTaGAACAGACATTCTGTTTACGTCCCATTCCTAGCCCACCCTCCG | + |
|
Preference number: 1 (lower is better) Translates to: NGEDKTQTWGEGVRQ*NRHSVYVPFLAHPP Trigger: CGGAGGGTGGGCTAGGAATGGGACGTAAACAGAATGTCTGTTCCACTGCCTGACCCCTTCACCCCATGTCTGTGTCTTGTCTTCACCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217733.2 |
||
| 3UTR CCA 90 bp | GACCATGAAGGTGGCAGGAGGGAACATGCCCATAGCAACCAACCTTaGGTCAGTTTTCAAAAGAGCCACTCAGAGTGGCCAGTTCTCTCT | + |
|
Preference number: 1 (lower is better) Translates to: DHEGGRREHAHSNQP*VSFQKSHSEWPVLS Trigger: AGAGAGAACTGGCCACTCTGAGTGGCTCTTTTGAAAACTGACCCAAGGTTGGTTGCTATGGGCATGTTCCCTCCTGCCACCTTCATGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217733.2 |
||
| 3UTR TCA 90 bp | CTTCTGGAACCAAGTCTAGGAATACAATGCCTCTTTAACATCTCCTaGACGACCATTTCCTCACAGGCCCCAGTTTATGGTCTGCCCCTC | + |
|
Preference number: 1 (lower is better) Translates to: LLEPSLGIQCLFNIS*TTISSQAPVYGLPL Trigger: GAGGGGCAGACCATAAACTGGGGCCTGTGAGGAAATGGTCGTTCAGGAGATGTTAAAGAGGCATTGTATTCCTAGACTTGGTTCCAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220427.2 |
||
| 3UTR-3UTR TCA 90 bp | CAGGCTGGACTGAGCCTTGCTTGCCCCTTTGACTCCCGACTCCCTTCTGGAACCGCTGGAAAGCCTCCTTaGATTCTTAAGGTGGTAGCC | + |
|
Preference number: 2 (lower is better) Translates to: QAGLSLACPFDSRLPSGTAGKPP*ILKVVA Trigger: GGCTACCACCTTAAGAATTCAAGGAGGCTTTCCAGC...GGTTCCAGAAGGGAGTCGGGAGTCAAAGGGGCAAGCAAGGCTCAGTCCAGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220427.2 |
||
| 3UTR-3UTR TCA 90 bp | GCCCATAGCAACCAACCTTGGGTCAGTTTTCAAAAGAGCCACTCAGAGTGGCCATTCCCTACAAGCTGGTaGGCGTTCCCAGACACCAGC | + |
|
Preference number: 2 (lower is better) Translates to: AHSNQPWVSFQKSHSEWPFPTSW*AFPDTS Trigger: GCTGGTGTCTGGGAACGCTCACCAGCTTGTAGGGAA...TGGCCACTCTGAGTGGCTCTTTTGAAAACTGACCCAAGGTTGGTTGCTATGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217733.2 |
||
| 3UTR-3UTR CCA 90 bp | AAGAAACCAAATGGGCAAGGTGCTGTGACAGGGGAGCCTCTGGAGCCACACAGACCAAAAGAAACCAAATaGGCAAGGTGCTGTGACAGG | + |
|
Preference number: 2 (lower is better) Translates to: KKPNGQGAVTGEPLEPHRPKETK*ARCCDR Trigger: CCTGTCACAGCACCTTGCCCATTTGGTTTCTTTTGG...TCTGTGTGGCTCCAGAGGCTCCCCTGTCACAGCACCTTGCCCATTTGGTTTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000164181.2 ENSMUST00000217733.2 ENSMUST00000217969.2 ENSMUST00000218127.2 ENSMUST00000219236.2 |
||
| 3UTR-3UTR CCA 90 bp | GAGGGGTACCCATGGGCCAGGAGACCACGAGACCATGAAGGTGGCAGGAGGGAATGTCCAGTAGAGGGATaGAAAAAGGACTTTTGTTTT | + |
|
Preference number: 2 (lower is better) Translates to: EGYPWARRPRDHEGGRRECPVEG*KKDFCF Trigger: AAAACAAAAGTCCTTTTTCCATCCCTCTACTGGACA...TTCCCTCCTGCCACCTTCATGGTCTCGTGGTCTCCTGGCCCATGGGTACCCCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000217733.2 |
||
| 3UTR CCA 72 bp | AAAGAGCCACTCAGAGTGGCCAGTTCTCTCTGTCCCTaGTTCCCCTCCCACTGGCTGTTAGCCCCCACCCCC | + |
|
Preference number: 3 (lower is better) Translates to: KEPLRVASSLCP*FPSHWLLAPTP Trigger: GGGGGTGGGGGCTAACAGCCAGTGGGAGGGGAACCAGGGACAGAGAGAACTGGCCACTCTGAGTGGCTCTTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217733.2 |
||
| 3UTR TCA 72 bp | CTGCTGTCTCCCCAACAGTTCCCTCCCAGGCTGGACTaGGCCTTGCTTGCCCCTTTGACTCCCGACTCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: LLSPQQFPPRLD*ALLAPLTPDSL Trigger: AAGGGAGTCGGGAGTCAAAGGGGCAAGCAAGGCTCAGTCCAGCCTGGGAGGGAACTGTTGGGGAGACAGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000217733.2 ENSMUST00000220427.2 |
||
| 3UTR CCA 72 bp | GACAGGGGAGCCTCTGGAGCCACACAGAAATCACACTaGGCAAGGAACAGACTCGGGATACAGAATGTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: DRGASGATQKSH*ARNRLGIQNVL Trigger: GAGGACATTCTGTATCCCGAGTCTGTTCCTTGCCCAGTGTGATTTCTGTGTGGCTCCAGAGGCTCCCCTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000217733.2 ENSMUST00000218127.2 ENSMUST00000219236.2 |
||
| 3UTR CCA 72 bp | GACAAGACACAGACATGGGGTGAAGGGGTCAGGCAGTaGAACAGACATTCTGTTTACGTCCCATTCCTAGCC | + |
|
Preference number: 3 (lower is better) Translates to: DKTQTWGEGVRQ*NRHSVYVPFLA Trigger: GGCTAGGAATGGGACGTAAACAGAATGTCTGTTCCACTGCCTGACCCCTTCACCCCATGTCTGTGTCTTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217733.2 |
||
| 3UTR CCA 72 bp | CAGAGGCAGAAAAGTTCTCAGCTACACCTACAGTTATaGTCAGCCACTGGCAGGAGGAGAGGTCAGCTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: QRQKSSQLHLQL*SATGRRRGQLW Trigger: CCAAAGCTGACCTCTCCTCCTGCCAGTGGCTGACCATAACTGTAGGTGTAGCTGAGAACTTTTCTGCCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217733.2 |
||
| 3UTR-3UTR CAA 90 bp | TACAGTTATGGTCAGCCACTGGCAGGAGGAGAGGTCAGCTTTGGGTTAGGGTACAAACTGCATTCCTCATaGAGGAATTTCTCCCCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: YSYGQPLAGGEVSFGLGYKLHSS*RNFSPP Trigger: GGGAGGGGAGAAATTCCTCAATGAGGAATGCAGTTT...GTACCCTAACCCAAAGCTGACCTCTCCTCCTGCCAGTGGCTGACCATAACTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217733.2 |
||
| 3UTR CCA 72 bp | GGAAGAGACATTAATGGTGAAGACAAGACACAGACATaGGGTGAAGGGGTCAGGCAGTGGAACAGACATTCT | + |
|
Preference number: 3 (lower is better) Translates to: GRDINGEDKTQT*GEGVRQWNRHS Trigger: AGAATGTCTGTTCCACTGCCTGACCCCTTCACCCCATGTCTGTGTCTTGTCTTCACCATTAATGTCTCTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217733.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGAAACCAAATGGGCAAGGTGCTGTGACAGGGGAGCCTCTGGAGCCACACAGAGAGAGCAAATTTTATTaGGTGAAGGCAAACATCATC | + |
|
Preference number: 3 (lower is better) Translates to: KKPNGQGAVTGEPLEPHRESKFY*VKANII Trigger: GATGATGTTTGCCTTCACCAAATAAAATTTGCTCTC...TCTGTGTGGCTCCAGAGGCTCCCCTGTCACAGCACCTTGCCCATTTGGTTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000164181.2 ENSMUST00000217733.2 ENSMUST00000217969.2 ENSMUST00000218127.2 ENSMUST00000219236.2 |
||
| CDS-3UTR GCA 90 bp | GGACTGAGCCTTGCTTGCCCCTTTGACTCCCGACTCCCTTCTGGAACCAAGTCTGCCCAGGCTAGGTCCTaGGGTCTGGTCCTCGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: GLSLACPFDSRLPSGTKSAQARS*GLVLGE Trigger: TTCACCGAGGACCAGACCGCAGGACCTAGCCTGGGC...AGACTTGGTTCCAGAAGGGAGTCGGGAGTCAAAGGGGCAAGCAAGGCTCAGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220427.2 |
||
| CDS-3UTR GCA 90 bp | ACATCTCCTGAACGACCATTTCCTCACAGGCCCCAGTTTATGGTCTGCCCCTCAACACACCCCCTGAGCTaGGGCAGGCTAGGCTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TSPERPFPHRPQFMVCPSTHPLS*GRLGSP Trigger: TGGAGAGCCTAGCCTGCCGCAGCTCAGGGGGTGTGT...TGAGGGGCAGACCATAAACTGGGGCCTGTGAGGAAATGGTCGTTCAGGAGATGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000220427.2 |
||
| CDS-3UTR CCA 90 bp | GCAAGGAACAGACTCGGGATACAGAATGTCCTCAGCCATTCAGCACCATCCGGAAGGAGAGGTCAGCTTTaGGTTAGGGTACCTCCACGC | + |
|
Preference number: 4 (lower is better) Translates to: ARNRLGIQNVLSHSAPSGRRGQL*VRVPPR Trigger: GCGTGGAGGTACCCTAACCCAAAGCTGACCTCTCCT...TCCGGATGGTGCTGAATGGCTGAGGACATTCTGTATCCCGAGTCTGTTCCTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000217776.2 ENSMUST00000219236.2 |
||
| CDS-3UTR CCA 90 bp | ACACTGGGCAAGGAACAGACTCGGGATACAGAATGTCCTCAGCCATTCAGCACCAGGAGAGGTCAGCTTTaGGTTAGGGTACCTCCACGC | + |
|
Preference number: 4 (lower is better) Translates to: TLGKEQTRDTECPQPFSTRRGQL*VRVPPR Trigger: GCGTGGAGGTACCCTAACCCAAAGCTGACCTCTCCT...GGTGCTGAATGGCTGAGGACATTCTGTATCCCGAGTCTGTTCCTTGCCCAGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219236.2 |
||
| CDS-3UTR CAA 90 bp | CAGGCTGGACTGAGCCTTGCTTGCCCCTTTGACTCCCGACTCCCTTCTGGAACCAGCTGGAAAGCCTCCTaGAATTCTGCGGTCTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: QAGLSLACPFDSRLPSGTSWKAS*NSAVWS Trigger: GGACCAGACCGCAGAATTCAAGGAGGCTTTCCAGCT...GGTTCCAGAAGGGAGTCGGGAGTCAAAGGGGCAAGCAAGGCTCAGTCCAGCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217733.2 |
||
| CDS-3UTR CAA 90 bp | CAAGGTGCTGTGACAGGGGAGCCTCTGGAGCCACACAGAAATCACACTGGGCAAAGCTGGAAAGCCTCCTaGAATTCTGCGGTCTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: QGAVTGEPLEPHRNHTGQSWKAS*NSAVWS Trigger: GGACCAGACCGCAGAATTCAAGGAGGCTTTCCAGCT...TTGCCCAGTGTGATTTCTGTGTGGCTCCAGAGGCTCCCCTGTCACAGCACCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000164181.2 ENSMUST00000217733.2 ENSMUST00000218127.2 ENSMUST00000219236.2 |
||
| CDS-3UTR CAA 90 bp | GGCAAGGAACAGACTCGGGATACAGAATGTCCTCAGCCATTCAGCACCATCCGGAGCTGGAAAGCCTCCTaGAATTCTGCGGTCTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: GKEQTRDTECPQPFSTIRSWKAS*NSAVWS Trigger: GGACCAGACCGCAGAATTCAAGGAGGCTTTCCAGCT...CCGGATGGTGCTGAATGGCTGAGGACATTCTGTATCCCGAGTCTGTTCCTTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000217733.2 ENSMUST00000218127.2 ENSMUST00000219236.2 |
||
| CDS-3UTR CAA 90 bp | GCAAGGAACAGACTCGGGATACAGAATGTCCTCAGCCATTCAGCACCATCCGGAAGCTGGAAAGCCTCCTaGAATTCTGCGGTCTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: ARNRLGIQNVLSHSAPSGSWKAS*NSAVWS Trigger: GGACCAGACCGCAGAATTCAAGGAGGCTTTCCAGCT...TCCGGATGGTGCTGAATGGCTGAGGACATTCTGTATCCCGAGTCTGTTCCTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000217733.2 ENSMUST00000217776.2 ENSMUST00000218127.2 ENSMUST00000219236.2 |
||
| CDS-3UTR CAA 90 bp | AAACCAAATGGGCAAGGTGCTGTGACAGGGGAGCCTCTGGAGCCACACAGAAATAGCTGGAAAGCCTCCTaGAATTCTGCGGTCTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: KPNGQGAVTGEPLEPHRNSWKAS*NSAVWS Trigger: GGACCAGACCGCAGAATTCAAGGAGGCTTTCCAGCT...ATTTCTGTGTGGCTCCAGAGGCTCCCCTGTCACAGCACCTTGCCCATTTGGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000164181.2 ENSMUST00000217733.2 ENSMUST00000218127.2 ENSMUST00000219236.2 |
||
| CDS TCA 72 bp | ACACAAGGACGGCCAGAAGAGGGAATCAGAACTGGATaGGACAAAACTTGCTCAAGTTTGGCACCTGCGGTC | + |
|
Preference number: 6 (lower is better) Translates to: TQGRPEEGIRTG*DKTCSSLAPAV Trigger: GACCGCAGGTGCCAAACTTGAGCAAGTTTTGTCTCATCCAGTTCTGATTCCCTCTTCTGGCCGTCCTTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220307.2 |
||
| CDS CCA 72 bp | GGGAACACAAGGACGGCCAGAAGAGGGAATCAGAACTaGATGAGACAAAACTTGCTCAAGTTTGGCACCTGC | + |
|
Preference number: 6 (lower is better) Translates to: GNTRTARRGNQN*MRQNLLKFGTC Trigger: GCAGGTGCCAAACTTGAGCAAGTTTTGTCTCATCCAGTTCTGATTCCCTCTTCTGGCCGTCCTTGTGTTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220307.2 |
||