Pregenerated sensors for MYL4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000061086Ensembl transcript IDs: ENSMUST00000018800.9, ENSMUST00000106956.10, ENSMUST00000106957.8, ENSMUST00000130588.8, ENSMUST00000136244.2, ENSMUST00000153761.8
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGGGCTCTTTATTTCCAGGGAAGGTTGTGGGTCAGAGAAGCCATGTaGGTCCAATACTCCGTAACAGTAACAGCCGCTGTGGATCTCTTG | + |
|
Preference number: 1 (lower is better) Translates to: GALYFQGRLWVREAM*VQYSVTVTAAVDLL Trigger: CAAGAGATCCACAGCGGCTGTTACTGTTACGGAGTATTGGACTCACATGGCTTCTCTGACCCACAACCTTCCCTGGAAATAAAGAGCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018800.9 ENSMUST00000106956.10 ENSMUST00000106957.8 |
||
| 3UTR CCA 90 bp | CTGCCTTGCCTTTATTTAAAAATCATTAAAGGAGGGTTAAGGATGTaGCTCAGCCAGGAGAGTGCTTGCCTAACAGTGGGCAAGGCCCTG | + |
|
Preference number: 1 (lower is better) Translates to: LPCLYLKIIKGGLRM*LSQESACLTVGKAL Trigger: CAGGGCCTTGCCCACTGTTAGGCAAGCACTCTCCTGGCTGAGCCACATCCTTAACCCTCCTTTAATGATTTTTAAATAAAGGCAAGGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136244.2 |
||
| 3UTR TCA 90 bp | CAGCTTTGGTTATGTATAATGAATTCAAAGGACTGCATCCAAAATTaGTTAAGGGCTGCTGGCAGGAAGTTGGCTCTCTTCATGGATGTG | + |
|
Preference number: 1 (lower is better) Translates to: QLWLCIMNSKDCIQN*LRAAGRKLALFMDV Trigger: CACATCCATGAAGAGAGCCAACTTCCTGCCAGCAGCCCTTAATCAATTTTGGATGCAGTCCTTTGAATTCATTATACATAACCAAAGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136244.2 |
||
| 3UTR-3UTR GCA 90 bp | AGGTGCCCTGCTCCTTGTTGCGGGAGATGTGTTGCAGGATGGGCAGGAACATCTCTTCAGGCTTGGGTTTaGCCAAAACGCGCAGCACCT | + |
|
Preference number: 2 (lower is better) Translates to: RCPAPCCGRCVAGWAGTSLQAWV*PKRAAP Trigger: AGGTGCTGCGCGTTTTGGGCAAACCCAAGCCTGAAG...AGATGTTCCTGCCCATCCTGCAACACATCTCCCGCAACAAGGAGCAGGGCACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130588.8 |
||
| 3UTR-3UTR TCA 90 bp | GTTATGTATAATGAATTCAAAGGACTGCATCCAAAATTGATTAAGGGCTGCTGGTGGATGTGGCCCCTTTaGGGTTGCCCACAGTCCAGC | + |
|
Preference number: 2 (lower is better) Translates to: VMYNEFKGLHPKLIKGCWWMWPL*GCPQSS Trigger: GCTGGACTGTGGGCAACCTCAAAGGGGCCACATCCA...CCAGCAGCCCTTAATCAATTTTGGATGCAGTCCTTTGAATTCATTATACATAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136244.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGAGTGCTTGCCTAACAGTGGGCAAGGCCCTGGGTGTGGTGACACATACACTTGCTGCTGGCAGGAAGTaGGCTCTCTTCATGGATGTG | + |
|
Preference number: 3 (lower is better) Translates to: ESACLTVGKALGVVTHTLAAGRK*ALFMDV Trigger: CACATCCATGAAGAGAGCCAACTTCCTGCCAGCAGC...AAGTGTATGTGTCACCACACCCAGGGCCTTGCCCACTGTTAGGCAAGCACTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136244.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTCCAGGGAAGGTTGTGGGTCAGAGAAGCCATGTGAGTCCAATACTCCGTAACGCCGCTGTGGATCTCTaGCTTTCTCACGCAGGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: FPGKVVGQRSHVSPILRNAAVDL*LSHAGP Trigger: TGGCCCTGCGTGAGAAAGCAAGAGATCCACAGCGGC...GTTACGGAGTATTGGACTCACATGGCTTCTCTGACCCACAACCTTCCCTGGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018800.9 ENSMUST00000106956.10 ENSMUST00000106957.8 |
||
| 3UTR CCA 72 bp | GGGTGTGGTGACACATACACTTCCAATCTCAGCACTTaGGACATAGAGGCAGGACGGTCAGGGTTGAAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: GCGDTYTSNLST*DIEAGRSGLKG Trigger: ACCCTTCAACCCTGACCGTCCTGCCTCTATGTCCCAAGTGCTGAGATTGGAAGTGTATGTGTCACCACACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136244.2 |
||
| CDS-3UTR GCA 90 bp | TACTCCGTAACAGTAACAGCCGCTGTGGATCTCTTGCTTTCTCACGCAGGGCCAGAGGGGCTCCGGAGCTaGGGATGCAGCTGGAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: YSVTVTAAVDLLLSHAGPEGLRS*GCSWSR Trigger: CCTGCTCCAGCTGCATCCGCAGCTCCGGAGCCCCTC...TGGCCCTGCGTGAGAAAGCAAGAGATCCACAGCGGCTGTTACTGTTACGGAGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018800.9 ENSMUST00000106956.10 ENSMUST00000106957.8 |
||
| CDS-3UTR GCA 90 bp | TGTTGCGGGAGATGTGTTGCAGGATGGGCAGGAACATCTCGAAGTCCAGTGTCTGAGGGGCTCCGGAGCTaGGGATGCAGCTGGAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CCGRCVAGWAGTSRSPVSEGLRS*GCSWSR Trigger: CCTGCTCCAGCTGCATCCGCAGCTCCGGAGCCCCTC...AGACACTGGACTTCGAGATGTTCCTGCCCATCCTGCAACACATCTCCCGCAACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130588.8 |
||
| 3UTR CAA 72 bp | AGGAGGGTTAAGGATGTGGCTCAGCCAGGAGAGTGCTaGCCTAACAGTGGGCAAGGCCCTGGGTGTGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: RRVKDVAQPGEC*PNSGQGPGCGD Trigger: GTCACCACACCCAGGGCCTTGCCCACTGTTAGGCAAGCACTCTCCTGGCTGAGCCACATCCTTAACCCTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136244.2 |
||
| CDS-3UTR TCA 90 bp | GAAACTCCAAGCTGGGGCTCTTTATTTCCAGGGAAGGTTGTGGGTCAGAGAAGCCAAAGGCAGAGTCCTTaGGGGGCTCCGGAGCTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: ETPSWGSLFPGKVVGQRSQRQSP*GAPELR Trigger: CCGCAGCTCCGGAGCCCCTCAAGGACTCTGCCTTTG...GCTTCTCTGACCCACAACCTTCCCTGGAAATAAAGAGCCCCAGCTTGGAGTTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000018800.9 ENSMUST00000106956.10 ENSMUST00000106957.8 |
||
| CDS-3UTR GCA 90 bp | GAAACTCCAAGCTGGGGCTCTTTATTTCCAGGGAAGGTTGTGGGTCAGAGAAGCAGCTGGAGCAGGGGCTaGAGCCGGCTTGGCAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ETPSWGSLFPGKVVGQRSSWSRG*SRLGSL Trigger: GAGACTGCCAAGCCGGCTGCAGCCCCTGCTCCAGCT...GCTTCTCTGACCCACAACCTTCCCTGGAAATAAAGAGCCCCAGCTTGGAGTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018800.9 ENSMUST00000106956.10 ENSMUST00000106957.8 |
||
| CDS-3UTR GCA 90 bp | CCAGGGAAGGTTGTGGGTCAGAGAAGCCATGTGAGTCCAATACTCCGTAACAGTAGCTGGAGCAGGGGCTaGAGCCGGCTTGGCAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PGKVVGQRSHVSPILRNSSWSRG*SRLGSL Trigger: GAGACTGCCAAGCCGGCTGCAGCCCCTGCTCCAGCT...ACTGTTACGGAGTATTGGACTCACATGGCTTCTCTGACCCACAACCTTCCCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018800.9 ENSMUST00000106956.10 ENSMUST00000106957.8 |
||
| CDS-3UTR GCA 90 bp | CAGAGAAGCCATGTGAGTCCAATACTCCGTAACAGTAACAGCCGCTGTGGATCTGAGGGGCTCCGGAGCTaGGGATGCAGCTGGAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QRSHVSPILRNSNSRCGSEGLRS*GCSWSR Trigger: CCTGCTCCAGCTGCATCCGCAGCTCCGGAGCCCCTC...AGATCCACAGCGGCTGTTACTGTTACGGAGTATTGGACTCACATGGCTTCTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018800.9 ENSMUST00000106956.10 ENSMUST00000106957.8 |
||
| CDS-3UTR GCA 90 bp | GGGAAGGTTGTGGGTCAGAGAAGCCATGTGAGTCCAATACTCCGTAACAGTAACAGCTGGAGCAGGGGCTaGAGCCGGCTTGGCAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GKVVGQRSHVSPILRNSNSWSRG*SRLGSL Trigger: GAGACTGCCAAGCCGGCTGCAGCCCCTGCTCCAGCT...GTTACTGTTACGGAGTATTGGACTCACATGGCTTCTCTGACCCACAACCTTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018800.9 ENSMUST00000106956.10 ENSMUST00000106957.8 |
||
| CDS-3UTR GCA 90 bp | AATGAAACTCCAAGCTGGGGCTCTTTATTTCCAGGGAAGGTTGTGGGTCAGAGAGAGGGGCTCCGGAGCTaGGGATGCAGCTGGAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NETPSWGSLFPGKVVGQREGLRS*GCSWSR Trigger: CCTGCTCCAGCTGCATCCGCAGCTCCGGAGCCCCTC...TCTCTGACCCACAACCTTCCCTGGAAATAAAGAGCCCCAGCTTGGAGTTTCATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018800.9 ENSMUST00000106956.10 ENSMUST00000106957.8 |
||
| 3UTR CAA 72 bp | TCCAGTGTCTTGGAACTCATCTCTTCAGGCTTGGGTTaGCCCAAAACGCGCAGCACCTCTGCGTTGGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SSVLELISSGLG*PKTRSTSALVG Trigger: CCCCACCAACGCAGAGGTGCTGCGCGTTTTGGGCAAACCCAAGCCTGAAGAGATGAGTTCCAAGACACTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130588.8 |
||
| CDS-3UTR TCA 90 bp | AGGAACATCTCGAAGTCCAGTGTCTTGGAACTCATCTCTTCAGGCTTGGGTTTGCAAAGGCAGAGTCCTTaGGGGGCTCCGGAGCTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: RNISKSSVLELISSGLGLQRQSP*GAPELR Trigger: CCGCAGCTCCGGAGCCCCTCAAGGACTCTGCCTTTG...CAAACCCAAGCCTGAAGAGATGAGTTCCAAGACACTGGACTTCGAGATGTTCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000130588.8 |
||
| CDS-3UTR GCA 90 bp | CAGGAACATCTCGAAGTCCAGTGTCTTGGAACTCATCTCTTCAGGCTTGGGTTTAGCTGGAGCAGGGGCTaGAGCCGGCTTGGCAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: QEHLEVQCLGTHLFRLGFSWSRG*SRLGSL Trigger: GAGACTGCCAAGCCGGCTGCAGCCCCTGCTCCAGCT...AAACCCAAGCCTGAAGAGATGAGTTCCAAGACACTGGACTTCGAGATGTTCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130588.8 |
||
| CDS-3UTR GCA 90 bp | TCTTTATTTCCAGGGAAGGTTGTGGGTCAGAGAAGCCATGTGAGTCCAATACTCCTCCGGAGCTGCGGATaGAGCTGGAGCAGGGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SLFPGKVVGQRSHVSPILLRSCG*SWSRGC Trigger: GCAGCCCCTGCTCCAGCTGCATCCGCAGCTCCGGAG...GAGTATTGGACTCACATGGCTTCTCTGACCCACAACCTTCCCTGGAAATAAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018800.9 ENSMUST00000106956.10 ENSMUST00000106957.8 |
||
| CDS-3UTR GCA 90 bp | TACTCCGTAACAGTAACAGCCGCTGTGGATCTCTTGCTTTCTCACGCAGGGCCACTTCAGGCTTGGGTTTaGCCAAAACGCGCAGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: YSVTVTAAVDLLLSHAGPLQAWV*PKRAAP Trigger: AGGTGCTGCGCGTTTTGGGCAAACCCAAGCCTGAAG...TGGCCCTGCGTGAGAAAGCAAGAGATCCACAGCGGCTGTTACTGTTACGGAGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018800.9 ENSMUST00000106956.10 ENSMUST00000106957.8 |
||
| CDS-3UTR GCA 90 bp | TACTCCGTAACAGTAACAGCCGCTGTGGATCTCTTGCTTTCTCACGCAGGGCCAGACATGCCGAAGCTCTaGACCCATGACTGTGCCGTT | + |
|
Preference number: 4 (lower is better) Translates to: YSVTVTAAVDLLLSHAGPDMPKL*THDCAV Trigger: AACGGCACAGTCATGGGTGCAGAGCTTCGGCATGTC...TGGCCCTGCGTGAGAAAGCAAGAGATCCACAGCGGCTGTTACTGTTACGGAGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018800.9 ENSMUST00000106956.10 ENSMUST00000106957.8 |
||
| CDS-3UTR GCA 90 bp | GTGGGTCAGAGAAGCCATGTGAGTCCAATACTCCGTAACAGTAACAGCCGCTGTCTTCAGGCTTGGGTTTaGCCAAAACGCGCAGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: VGQRSHVSPILRNSNSRCLQAWV*PKRAAP Trigger: AGGTGCTGCGCGTTTTGGGCAAACCCAAGCCTGAAG...ACAGCGGCTGTTACTGTTACGGAGTATTGGACTCACATGGCTTCTCTGACCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018800.9 ENSMUST00000106956.10 ENSMUST00000106957.8 |
||
| CDS-3UTR GCA 90 bp | TACTCCGTAACAGTAACAGCCGCTGTGGATCTCTTGCTTTCTCACGCAGGGCCATTGCGGGAGATGTGTTaGAGGATGGGCAGGAACATC | + |
|
Preference number: 4 (lower is better) Translates to: YSVTVTAAVDLLLSHAGPLREMC*RMGRNI Trigger: GATGTTCCTGCCCATCCTGCAACACATCTCCCGCAA...TGGCCCTGCGTGAGAAAGCAAGAGATCCACAGCGGCTGTTACTGTTACGGAGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018800.9 ENSMUST00000106956.10 ENSMUST00000106957.8 |
||
| CDS-3UTR GCA 90 bp | GTTGTGGGTCAGAGAAGCCATGTGAGTCCAATACTCCGTAACAGTAACAGCCGCTGCCCTGCTCCTTGTTaGGGGAGATGTGTTGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VVGQRSHVSPILRNSNSRCPAPC*GRCVAG Trigger: TCCTGCAACACATCTCCCGCAACAAGGAGCAGGGCA...GCGGCTGTTACTGTTACGGAGTATTGGACTCACATGGCTTCTCTGACCCACAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018800.9 ENSMUST00000106956.10 ENSMUST00000106957.8 |
||
| CDS-3UTR GCA 90 bp | CCAGGGAAGGTTGTGGGTCAGAGAAGCCATGTGAGTCCAATACTCCGTAACAGTGACATGCCGAAGCTCTaGACCCATGACTGTGCCGTT | + |
|
Preference number: 4 (lower is better) Translates to: PGKVVGQRSHVSPILRNSDMPKL*THDCAV Trigger: AACGGCACAGTCATGGGTGCAGAGCTTCGGCATGTC...ACTGTTACGGAGTATTGGACTCACATGGCTTCTCTGACCCACAACCTTCCCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018800.9 ENSMUST00000106956.10 ENSMUST00000106957.8 |
||
| 3UTR CAA 72 bp | CAATACTCCGTAACAGTAACAGCCGCTGTGGATCTCTaGCTTTCTCACGCAGGGCCAAGCACCCTGGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: QYSVTVTAAVDL*LSHAGPSTLEK Trigger: TTTCTCCAGGGTGCTTGGCCCTGCGTGAGAAAGCAAGAGATCCACAGCGGCTGTTACTGTTACGGAGTATTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018800.9 ENSMUST00000106956.10 ENSMUST00000106957.8 |
||
| CDS-3UTR GCA 90 bp | GTGGGTCAGAGAAGCCATGTGAGTCCAATACTCCGTAACAGTAACAGCCGCTGTTTGCGGGAGATGTGTTaGAGGATGGGCAGGAACATC | + |
|
Preference number: 4 (lower is better) Translates to: VGQRSHVSPILRNSNSRCLREMC*RMGRNI Trigger: GATGTTCCTGCCCATCCTGCAACACATCTCCCGCAA...ACAGCGGCTGTTACTGTTACGGAGTATTGGACTCACATGGCTTCTCTGACCCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018800.9 ENSMUST00000106956.10 ENSMUST00000106957.8 |
||
| CDS-3UTR GCA 90 bp | GGGAAGGTTGTGGGTCAGAGAAGCCATGTGAGTCCAATACTCCGTAACAGTAACGACATGCCGAAGCTCTaGACCCATGACTGTGCCGTT | + |
|
Preference number: 4 (lower is better) Translates to: GKVVGQRSHVSPILRNSNDMPKL*THDCAV Trigger: AACGGCACAGTCATGGGTGCAGAGCTTCGGCATGTC...GTTACTGTTACGGAGTATTGGACTCACATGGCTTCTCTGACCCACAACCTTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018800.9 ENSMUST00000106956.10 ENSMUST00000106957.8 |
||
| CDS-3UTR GCA 90 bp | CAGTGTCTTGGAACTCATCTCTTCAGGCTTGGGTTTGCCCAAAACGCGCAGCACTCCTTCTCTGGAAAATaGAACAGAGCGTGCGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: QCLGTHLFRLGFAQNAQHSFSGK*NRACGG Trigger: ACCACCGCACGCTCTGTTGCATTTTCCAGAGAAGGA...GTGCTGCGCGTTTTGGGCAAACCCAAGCCTGAAGAGATGAGTTCCAAGACACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130588.8 |
||
| CDS-3UTR GCA 90 bp | CATGTGAGTCCAATACTCCGTAACAGTAACAGCCGCTGTGGATCTCTTGCTTTCTGCCCTGCTCCTTGTTaGGGGAGATGTGTTGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: HVSPILRNSNSRCGSLAFCPAPC*GRCVAG Trigger: TCCTGCAACACATCTCCCGCAACAAGGAGCAGGGCA...GAAAGCAAGAGATCCACAGCGGCTGTTACTGTTACGGAGTATTGGACTCACATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018800.9 ENSMUST00000106956.10 ENSMUST00000106957.8 |
||
| CDS-3UTR GCA 90 bp | AGAAGCCATGTGAGTCCAATACTCCGTAACAGTAACAGCCGCTGTGGATCTCTTTGCCCTGCTCCTTGTTaGGGGAGATGTGTTGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RSHVSPILRNSNSRCGSLCPAPC*GRCVAG Trigger: TCCTGCAACACATCTCCCGCAACAAGGAGCAGGGCA...AAGAGATCCACAGCGGCTGTTACTGTTACGGAGTATTGGACTCACATGGCTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018800.9 ENSMUST00000106956.10 ENSMUST00000106957.8 |
||
| CDS-3UTR CCA 90 bp | TACTCCGTAACAGTAACAGCCGCTGTGGATCTCTTGCTTTCTCACGCAGGGCCAAGATGTGTTGCAGGATaGGCAGGAACATCTCGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: YSVTVTAAVDLLLSHAGPRCVAG*AGTSRS Trigger: ACTTCGAGATGTTCCTGCCCATCCTGCAACACATCT...TGGCCCTGCGTGAGAAAGCAAGAGATCCACAGCGGCTGTTACTGTTACGGAGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018800.9 ENSMUST00000106956.10 ENSMUST00000106957.8 |
||
| CDS-3UTR GCA 90 bp | CATGTGAGTCCAATACTCCGTAACAGTAACAGCCGCTGTGGATCTCTTGCTTTCTTGCGGGAGATGTGTTaGAGGATGGGCAGGAACATC | + |
|
Preference number: 4 (lower is better) Translates to: HVSPILRNSNSRCGSLAFLREMC*RMGRNI Trigger: GATGTTCCTGCCCATCCTGCAACACATCTCCCGCAA...GAAAGCAAGAGATCCACAGCGGCTGTTACTGTTACGGAGTATTGGACTCACATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018800.9 ENSMUST00000106956.10 ENSMUST00000106957.8 |
||
| CDS-3UTR CCA 90 bp | TTTCCAGGGAAGGTTGTGGGTCAGAGAAGCCATGTGAGTCCAATACTCCGTAACCGAAGTCCAGTGTCTTaGAACTCATCTCTTCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: FPGKVVGQRSHVSPILRNRSPVS*NSSLQA Trigger: AGCCTGAAGAGATGAGTTCCAAGACACTGGACTTCG...GTTACGGAGTATTGGACTCACATGGCTTCTCTGACCCACAACCTTCCCTGGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018800.9 ENSMUST00000106956.10 ENSMUST00000106957.8 |
||
| CDS-3UTR CCA 90 bp | GTCCAATACTCCGTAACAGTAACAGCCGCTGTGGATCTCTTGCTTTCTCACGCACGAAGTCCAGTGTCTTaGAACTCATCTCTTCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VQYSVTVTAAVDLLLSHARSPVS*NSSLQA Trigger: AGCCTGAAGAGATGAGTTCCAAGACACTGGACTTCG...TGCGTGAGAAAGCAAGAGATCCACAGCGGCTGTTACTGTTACGGAGTATTGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018800.9 ENSMUST00000106956.10 ENSMUST00000106957.8 |
||
| CDS-3UTR CCA 90 bp | AGAAGCCATGTGAGTCCAATACTCCGTAACAGTAACAGCCGCTGTGGATCTCTTAGATGTGTTGCAGGATaGGCAGGAACATCTCGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: RSHVSPILRNSNSRCGSLRCVAG*AGTSRS Trigger: ACTTCGAGATGTTCCTGCCCATCCTGCAACACATCT...AAGAGATCCACAGCGGCTGTTACTGTTACGGAGTATTGGACTCACATGGCTTCT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018800.9 ENSMUST00000106956.10 ENSMUST00000106957.8 |
||
| CDS-3UTR CCA 90 bp | AATGAAACTCCAAGCTGGGGCTCTTTATTTCCAGGGAAGGTTGTGGGTCAGAGAAGATGTGTTGCAGGATaGGCAGGAACATCTCGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: NETPSWGSLFPGKVVGQRRCVAG*AGTSRS Trigger: ACTTCGAGATGTTCCTGCCCATCCTGCAACACATCT...TCTCTGACCCACAACCTTCCCTGGAAATAAAGAGCCCCAGCTTGGAGTTTCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018800.9 ENSMUST00000106956.10 ENSMUST00000106957.8 |
||
| CDS-3UTR CCA 90 bp | AGGAACATCTCGAAGTCCAGTGTCTTGGAACTCATCTCTTCAGGCTTGGGTTTGCACTCACCTTCGATCTaGTCAGCACTGAAGTCTATC | + |
|
Preference number: 4 (lower is better) Translates to: RNISKSSVLELISSGLGLHSPSI*SALKSI Trigger: GATAGACTTCAGTGCTGACCAGATCGAAGGTGAGTG...CAAACCCAAGCCTGAAGAGATGAGTTCCAAGACACTGGACTTCGAGATGTTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130588.8 |
||
| CDS-3UTR CCA 90 bp | GGGAAGGTTGTGGGTCAGAGAAGCCATGTGAGTCCAATACTCCGTAACAGTAACTTGAATTCTTCGATCTaGTCAGCACTGAAGTCTATC | + |
|
Preference number: 4 (lower is better) Translates to: GKVVGQRSHVSPILRNSNLNSSI*SALKSI Trigger: GATAGACTTCAGTGCTGACCAGATCGAAGAATTCAA...GTTACTGTTACGGAGTATTGGACTCACATGGCTTCTCTGACCCACAACCTTCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018800.9 ENSMUST00000106956.10 ENSMUST00000106957.8 |
||
| CDS-3UTR CCA 90 bp | AGCCATGTGAGTCCAATACTCCGTAACAGTAACAGCCGCTGTGGATCTCTTGCTTTGAATTCTTCGATCTaGTCAGCACTGAAGTCTATC | + |
|
Preference number: 4 (lower is better) Translates to: SHVSPILRNSNSRCGSLALNSSI*SALKSI Trigger: GATAGACTTCAGTGCTGACCAGATCGAAGAATTCAA...AGCAAGAGATCCACAGCGGCTGTTACTGTTACGGAGTATTGGACTCACATGGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018800.9 ENSMUST00000106956.10 ENSMUST00000106957.8 |
||
| CDS-3UTR CCA 90 bp | TCTTTATTTCCAGGGAAGGTTGTGGGTCAGAGAAGCCATGTGAGTCCAATACTCTTGAATTCTTCGATCTaGTCAGCACTGAAGTCTATC | + |
|
Preference number: 4 (lower is better) Translates to: SLFPGKVVGQRSHVSPILLNSSI*SALKSI Trigger: GATAGACTTCAGTGCTGACCAGATCGAAGAATTCAA...GAGTATTGGACTCACATGGCTTCTCTGACCCACAACCTTCCCTGGAAATAAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018800.9 ENSMUST00000106956.10 ENSMUST00000106957.8 |
||
| CDS GCA 90 bp | GTCCTTGAGGGGCTCCGGAGCTGCGGATGCAGCTGGAGCAGGGGCTaGAGCCGGCTTGGCAGTCTCCTTCTTAGGCTCGGGTTTCTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: VLEGLRSCGCSWSRG*SRLGSLLLRLGFLG Trigger: CCCAAGAAACCCGAGCCTAAGAAGGAGACTGCCAAGCCGGCTGCAGCCCCTGCTCCAGCTGCATCCGCAGCTCCGGAGCCCCTCAAGGAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018800.9 ENSMUST00000106956.10 ENSMUST00000106957.8 ENSMUST00000130588.8 ENSMUST00000153761.8 |
||
| CDS CCA 90 bp | GTCAAAGGCAGAGTCCTTGAGGGGCTCCGGAGCTGCGGATGCAGCTaGAGCAGGGGCTGCAGCCGGCTTGGCAGTCTCCTTCTTAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: VKGRVLEGLRSCGCS*SRGCSRLGSLLLRL Trigger: GAGCCTAAGAAGGAGACTGCCAAGCCGGCTGCAGCCCCTGCTCCAGCTGCATCCGCAGCTCCGGAGCCCCTCAAGGACTCTGCCTTTGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018800.9 ENSMUST00000106956.10 ENSMUST00000106957.8 ENSMUST00000130588.8 ENSMUST00000153761.8 |
||
| CDS GCA 90 bp | CTTTGGGTCAAAGGCAGAGTCCTTGAGGGGCTCCGGAGCTGCGGATaGAGCTGGAGCAGGGGCTGCAGCCGGCTTGGCAGTCTCCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LWVKGRVLEGLRSCG*SWSRGCSRLGSLLL Trigger: AAGAAGGAGACTGCCAAGCCGGCTGCAGCCCCTGCTCCAGCTGCATCCGCAGCTCCGGAGCCCCTCAAGGACTCTGCCTTTGACCCAAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018800.9 ENSMUST00000106956.10 ENSMUST00000106957.8 ENSMUST00000130588.8 ENSMUST00000153761.8 |
||
| CDS-3UTR CAA 90 bp | AGTGTCTTGGAACTCATCTCTTCAGGCTTGGGTTTGCCCAAAACGCGCAGCACCGGGGCTGCAGCCGGCTaGGCAGTCTCCTTCTTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SVLELISSGLGLPKTRSTGAAAG*AVSFLG Trigger: GCCTAAGAAGGAGACTGCCAAGCCGGCTGCAGCCCC...GGTGCTGCGCGTTTTGGGCAAACCCAAGCCTGAAGAGATGAGTTCCAAGACACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130588.8 |
||
| CDS-3UTR CAA 90 bp | GTTGTGGGTCAGAGAAGCCATGTGAGTCCAATACTCCGTAACAGTAACAGCCGCGGGGCTGCAGCCGGCTaGGCAGTCTCCTTCTTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: VVGQRSHVSPILRNSNSRGAAAG*AVSFLG Trigger: GCCTAAGAAGGAGACTGCCAAGCCGGCTGCAGCCCC...GCGGCTGTTACTGTTACGGAGTATTGGACTCACATGGCTTCTCTGACCCACAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018800.9 ENSMUST00000106956.10 ENSMUST00000106957.8 |
||
| CDS-3UTR CAA 90 bp | CAGAGAAGCCATGTGAGTCCAATACTCCGTAACAGTAACAGCCGCTGTGGATCTGGGGCTGCAGCCGGCTaGGCAGTCTCCTTCTTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: QRSHVSPILRNSNSRCGSGAAAG*AVSFLG Trigger: GCCTAAGAAGGAGACTGCCAAGCCGGCTGCAGCCCC...AGATCCACAGCGGCTGTTACTGTTACGGAGTATTGGACTCACATGGCTTCTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018800.9 ENSMUST00000106956.10 ENSMUST00000106957.8 |
||
| CDS-3UTR CAA 90 bp | AATGAAACTCCAAGCTGGGGCTCTTTATTTCCAGGGAAGGTTGTGGGTCAGAGAGGGGCTGCAGCCGGCTaGGCAGTCTCCTTCTTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: NETPSWGSLFPGKVVGQRGAAAG*AVSFLG Trigger: GCCTAAGAAGGAGACTGCCAAGCCGGCTGCAGCCCC...TCTCTGACCCACAACCTTCCCTGGAAATAAAGAGCCCCAGCTTGGAGTTTCATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018800.9 ENSMUST00000106956.10 ENSMUST00000106957.8 |
||
| CDS-3UTR CAA 90 bp | AGCCATGTGAGTCCAATACTCCGTAACAGTAACAGCCGCTGTGGATCTCTTGCTTCAAAGGCAGAGTCCTaGAGGGGCTCCGGAGCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: SHVSPILRNSNSRCGSLASKAES*RGSGAA Trigger: CGCAGCTCCGGAGCCCCTCAAGGACTCTGCCTTTGA...AGCAAGAGATCCACAGCGGCTGTTACTGTTACGGAGTATTGGACTCACATGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018800.9 ENSMUST00000106956.10 ENSMUST00000106957.8 |
||
| CDS-3UTR CAA 90 bp | TACTCCGTAACAGTAACAGCCGCTGTGGATCTCTTGCTTTCTCACGCAGGGCCATCTTCAGGCTTGGGTTaGCCCAAAACGCGCAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: YSVTVTAAVDLLLSHAGPSSGLG*PKTRST Trigger: GGTGCTGCGCGTTTTGGGCAAACCCAAGCCTGAAGA...TGGCCCTGCGTGAGAAAGCAAGAGATCCACAGCGGCTGTTACTGTTACGGAGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018800.9 ENSMUST00000106956.10 ENSMUST00000106957.8 |
||
| CDS-3UTR CAA 90 bp | GGGAAGGTTGTGGGTCAGAGAAGCCATGTGAGTCCAATACTCCGTAACAGTAACGTGCCCTGCTCCTTGTaGCGGGAGATGTGTTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GKVVGQRSHVSPILRNSNVPCSL*REMCCR Trigger: CCTGCAACACATCTCCCGCAACAAGGAGCAGGGCAC...GTTACTGTTACGGAGTATTGGACTCACATGGCTTCTCTGACCCACAACCTTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018800.9 ENSMUST00000106956.10 ENSMUST00000106957.8 |
||
| CDS-3UTR CAA 90 bp | CAGAGAAGCCATGTGAGTCCAATACTCCGTAACAGTAACAGCCGCTGTGGATCTTCTTCAGGCTTGGGTTaGCCCAAAACGCGCAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: QRSHVSPILRNSNSRCGSSSGLG*PKTRST Trigger: GGTGCTGCGCGTTTTGGGCAAACCCAAGCCTGAAGA...AGATCCACAGCGGCTGTTACTGTTACGGAGTATTGGACTCACATGGCTTCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018800.9 ENSMUST00000106956.10 ENSMUST00000106957.8 |
||
| CDS-3UTR CAA 90 bp | GTGGGTCAGAGAAGCCATGTGAGTCCAATACTCCGTAACAGTAACAGCCGCTGTGTTGCGGGAGATGTGTaGCAGGATGGGCAGGAACAT | + |
|
Preference number: 5 (lower is better) Translates to: VGQRSHVSPILRNSNSRCVAGDV*QDGQEH Trigger: ATGTTCCTGCCCATCCTGCAACACATCTCCCGCAAC...ACAGCGGCTGTTACTGTTACGGAGTATTGGACTCACATGGCTTCTCTGACCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018800.9 ENSMUST00000106956.10 ENSMUST00000106957.8 |
||
| CDS-3UTR CAA 90 bp | CATGTGAGTCCAATACTCCGTAACAGTAACAGCCGCTGTGGATCTCTTGCTTTCGTGCCCTGCTCCTTGTaGCGGGAGATGTGTTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: HVSPILRNSNSRCGSLAFVPCSL*REMCCR Trigger: CCTGCAACACATCTCCCGCAACAAGGAGCAGGGCAC...GAAAGCAAGAGATCCACAGCGGCTGTTACTGTTACGGAGTATTGGACTCACATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018800.9 ENSMUST00000106956.10 ENSMUST00000106957.8 |
||
| CDS-3UTR CAA 90 bp | TACTCCGTAACAGTAACAGCCGCTGTGGATCTCTTGCTTTCTCACGCAGGGCCATCTTCATCTCTCCCGTaGGAGTCCGGTCAAACAATG | + |
|
Preference number: 5 (lower is better) Translates to: YSVTVTAAVDLLLSHAGPSSSLP*ESGQTM Trigger: CATTGTTTGACCGGACTCCAACGGGAGAGATGAAGA...TGGCCCTGCGTGAGAAAGCAAGAGATCCACAGCGGCTGTTACTGTTACGGAGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018800.9 ENSMUST00000106956.10 ENSMUST00000106957.8 |
||
| CDS-3UTR CAA 90 bp | AGAAGCCATGTGAGTCCAATACTCCGTAACAGTAACAGCCGCTGTGGATCTCTTTCTTCAGGCTTGGGTTaGCCCAAAACGCGCAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: RSHVSPILRNSNSRCGSLSSGLG*PKTRST Trigger: GGTGCTGCGCGTTTTGGGCAAACCCAAGCCTGAAGA...AAGAGATCCACAGCGGCTGTTACTGTTACGGAGTATTGGACTCACATGGCTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018800.9 ENSMUST00000106956.10 ENSMUST00000106957.8 |
||
| CDS-3UTR CAA 90 bp | AGAAGCCATGTGAGTCCAATACTCCGTAACAGTAACAGCCGCTGTGGATCTCTTGTGCCGTTGCTTTCTTaGTCAAAGACCCGCAGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: RSHVSPILRNSNSRCGSLVPLLS*SKTRSP Trigger: GGGGCTGCGGGTCTTTGACAAAGAAAGCAACGGCAC...AAGAGATCCACAGCGGCTGTTACTGTTACGGAGTATTGGACTCACATGGCTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018800.9 ENSMUST00000106956.10 ENSMUST00000106957.8 |
||
| CDS-3UTR CAA 90 bp | CATGTGAGTCCAATACTCCGTAACAGTAACAGCCGCTGTGGATCTCTTGCTTTCGTGCCGTTGCTTTCTTaGTCAAAGACCCGCAGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: HVSPILRNSNSRCGSLAFVPLLS*SKTRSP Trigger: GGGGCTGCGGGTCTTTGACAAAGAAAGCAACGGCAC...GAAAGCAAGAGATCCACAGCGGCTGTTACTGTTACGGAGTATTGGACTCACATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018800.9 ENSMUST00000106956.10 ENSMUST00000106957.8 |
||
| CDS-3UTR CAA 90 bp | GTCCAGTGTCTTGGAACTCATCTCTTCAGGCTTGGGTTTGCCCAAAACGCGCAGCTATCTTCACACTCTTaGGGTCAAAGGCAGAGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: VQCLGTHLFRLGFAQNAQLSSHS*GQRQSP Trigger: AGGACTCTGCCTTTGACCCAAAGAGTGTGAAGATAG...CTGCGCGTTTTGGGCAAACCCAAGCCTGAAGAGATGAGTTCCAAGACACTGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130588.8 |
||
| CDS-3UTR CAA 90 bp | GTTGTGGGTCAGAGAAGCCATGTGAGTCCAATACTCCGTAACAGTAACAGCCGCTCTTCATCTCTCCCGTaGGAGTCCGGTCAAACAATG | + |
|
Preference number: 5 (lower is better) Translates to: VVGQRSHVSPILRNSNSRSSSLP*ESGQTM Trigger: CATTGTTTGACCGGACTCCAACGGGAGAGATGAAGA...GCGGCTGTTACTGTTACGGAGTATTGGACTCACATGGCTTCTCTGACCCACAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018800.9 ENSMUST00000106956.10 ENSMUST00000106957.8 |
||
| CDS-3UTR CAA 90 bp | TCTTTATTTCCAGGGAAGGTTGTGGGTCAGAGAAGCCATGTGAGTCCAATACTCGTGCCGTTGCTTTCTTaGTCAAAGACCCGCAGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: SLFPGKVVGQRSHVSPILVPLLS*SKTRSP Trigger: GGGGCTGCGGGTCTTTGACAAAGAAAGCAACGGCAC...GAGTATTGGACTCACATGGCTTCTCTGACCCACAACCTTCCCTGGAAATAAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018800.9 ENSMUST00000106956.10 ENSMUST00000106957.8 |
||
| CDS CCA 90 bp | GGAAAATGCAACAGAGCGTGCGGTGGTTCACACTCACCTTCGATCTaGTCAGCACTGAAGTCTATCTTCACACTCTTTGGGTCAAAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: GKCNRACGGSHSPSI*SALKSIFTLFGSKA Trigger: TGCCTTTGACCCAAAGAGTGTGAAGATAGACTTCAGTGCTGACCAGATCGAAGGTGAGTGTGAACCACCGCACGCTCTGTTGCATTTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130588.8 |
||
| CDS-3UTR CAA 90 bp | GAAACTCCAAGCTGGGGCTCTTTATTTCCAGGGAAGGTTGTGGGTCAGAGAAGCCTATCTTCACACTCTTaGGGTCAAAGGCAGAGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: ETPSWGSLFPGKVVGQRSLSSHS*GQRQSP Trigger: AGGACTCTGCCTTTGACCCAAAGAGTGTGAAGATAG...GCTTCTCTGACCCACAACCTTCCCTGGAAATAAAGAGCCCCAGCTTGGAGTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018800.9 ENSMUST00000106956.10 ENSMUST00000106957.8 |
||
| CDS-3UTR CAA 90 bp | GTTGTGGGTCAGAGAAGCCATGTGAGTCCAATACTCCGTAACAGTAACAGCCGCCTATCTTCACACTCTTaGGGTCAAAGGCAGAGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: VVGQRSHVSPILRNSNSRLSSHS*GQRQSP Trigger: AGGACTCTGCCTTTGACCCAAAGAGTGTGAAGATAG...GCGGCTGTTACTGTTACGGAGTATTGGACTCACATGGCTTCTCTGACCCACAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018800.9 ENSMUST00000106956.10 ENSMUST00000106957.8 |
||
| CDS-3UTR CAA 90 bp | CCAGGGAAGGTTGTGGGTCAGAGAAGCCATGTGAGTCCAATACTCCGTAACAGTCTATCTTCACACTCTTaGGGTCAAAGGCAGAGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: PGKVVGQRSHVSPILRNSLSSHS*GQRQSP Trigger: AGGACTCTGCCTTTGACCCAAAGAGTGTGAAGATAG...ACTGTTACGGAGTATTGGACTCACATGGCTTCTCTGACCCACAACCTTCCCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018800.9 ENSMUST00000106956.10 ENSMUST00000106957.8 |
||
| CDS-3UTR CAA 90 bp | TCTTTATTTCCAGGGAAGGTTGTGGGTCAGAGAAGCCATGTGAGTCCAATACTCGTTGCGGGAGATGTGTaGCAGGATGGGCAGGAACAT | + |
|
Preference number: 5 (lower is better) Translates to: SLFPGKVVGQRSHVSPILVAGDV*QDGQEH Trigger: ATGTTCCTGCCCATCCTGCAACACATCTCCCGCAAC...GAGTATTGGACTCACATGGCTTCTCTGACCCACAACCTTCCCTGGAAATAAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018800.9 ENSMUST00000106956.10 ENSMUST00000106957.8 |
||
| CDS-3UTR CAA 90 bp | CATGTGAGTCCAATACTCCGTAACAGTAACAGCCGCTGTGGATCTCTTGCTTTCTCTTCATCTCTCCCGTaGGAGTCCGGTCAAACAATG | + |
|
Preference number: 5 (lower is better) Translates to: HVSPILRNSNSRCGSLAFSSSLP*ESGQTM Trigger: CATTGTTTGACCGGACTCCAACGGGAGAGATGAAGA...GAAAGCAAGAGATCCACAGCGGCTGTTACTGTTACGGAGTATTGGACTCACATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018800.9 ENSMUST00000106956.10 ENSMUST00000106957.8 |
||
| CDS CCA 90 bp | GCCTCTTTGAATTTCCTTCTCTGGAAAATGCAACAGAGCGTGCGGTaGTTCACACTCACCTTCGATCTGGTCAGCACTGAAGTCTATCTT | + |
|
Preference number: 5 (lower is better) Translates to: ASLNFLLWKMQQSVR*FTLTFDLVSTEVYL Trigger: AAGATAGACTTCAGTGCTGACCAGATCGAAGGTGAGTGTGAACCACCGCACGCTCTGTTGCATTTTCCAGAGAAGGAAATTCAAAGAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130588.8 |
||
| CDS-3UTR CAA 90 bp | GTGGGTCAGAGAAGCCATGTGAGTCCAATACTCCGTAACAGTAACAGCCGCTGTAATGAAAAGGCCTCTTaGAATTCTTCGATCTGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: VGQRSHVSPILRNSNSRCNEKAS*NSSIWS Trigger: TGACCAGATCGAAGAATTCAAAGAGGCCTTTTCATT...ACAGCGGCTGTTACTGTTACGGAGTATTGGACTCACATGGCTTCTCTGACCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018800.9 ENSMUST00000106956.10 ENSMUST00000106957.8 |
||
| CDS-3UTR CAA 90 bp | AGTGTCTTGGAACTCATCTCTTCAGGCTTGGGTTTGCCCAAAACGCGCAGCACCAATGAAAAGGCCTCTTaGAATTTCCTTCTCTGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: SVLELISSGLGLPKTRSTNEKAS*NFLLWK Trigger: TTTCCAGAGAAGGAAATTCAAAGAGGCCTTTTCATT...GGTGCTGCGCGTTTTGGGCAAACCCAAGCCTGAAGAGATGAGTTCCAAGACACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130588.8 |
||
| CDS-3UTR CAA 90 bp | GGGAAGGTTGTGGGTCAGAGAAGCCATGTGAGTCCAATACTCCGTAACAGTAACAATGAAAAGGCCTCTTaGAATTCTTCGATCTGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: GKVVGQRSHVSPILRNSNNEKAS*NSSIWS Trigger: TGACCAGATCGAAGAATTCAAAGAGGCCTTTTCATT...GTTACTGTTACGGAGTATTGGACTCACATGGCTTCTCTGACCCACAACCTTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018800.9 ENSMUST00000106956.10 ENSMUST00000106957.8 |
||
| CDS-3UTR CAA 90 bp | CATGTGAGTCCAATACTCCGTAACAGTAACAGCCGCTGTGGATCTCTTGCTTTCAATGAAAAGGCCTCTTaGAATTCTTCGATCTGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: HVSPILRNSNSRCGSLAFNEKAS*NSSIWS Trigger: TGACCAGATCGAAGAATTCAAAGAGGCCTTTTCATT...GAAAGCAAGAGATCCACAGCGGCTGTTACTGTTACGGAGTATTGGACTCACATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018800.9 ENSMUST00000106956.10 ENSMUST00000106957.8 |
||
| CDS GCA 72 bp | TGGGTCAAAGGCAGAGTCCTTGAGGGGCTCCGGAGCTaGGGATGCAGCTGGAGCAGGGGCTGCAGCCGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: WVKGRVLEGLRS*GCSWSRGCSRL Trigger: AAGCCGGCTGCAGCCCCTGCTCCAGCTGCATCCGCAGCTCCGGAGCCCCTCAAGGACTCTGCCTTTGACCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018800.9 ENSMUST00000106956.10 ENSMUST00000106957.8 ENSMUST00000130588.8 ENSMUST00000153761.8 |
||
| CDS TCA 72 bp | CTATCTTCACACTCTTTGGGTCAAAGGCAGAGTCCTTaGGGGGCTCCGGAGCTGCGGATGCAGCTGGAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LSSHSLGQRQSP*GAPELRMQLEQ Trigger: CTGCTCCAGCTGCATCCGCAGCTCCGGAGCCCCTCAAGGACTCTGCCTTTGACCCAAAGAGTGTGAAGATAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000018800.9 ENSMUST00000106956.10 ENSMUST00000106957.8 ENSMUST00000130588.8 ENSMUST00000153761.8 |
||
| CDS TCA 72 bp | GCGGTGGTTCACACTCACCTTCGATCTGGTCAGCACTaGAGTCTATCTTCACACTCTTTGGGTCAAAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: AVVHTHLRSGQH*SLSSHSLGQRQ Trigger: CTGCCTTTGACCCAAAGAGTGTGAAGATAGACTTCAGTGCTGACCAGATCGAAGGTGAGTGTGAACCACCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130588.8 |
||
| CDS CCA 72 bp | AACAGAGCGTGCGGTGGTTCACACTCACCTTCGATCTaGTCAGCACTGAAGTCTATCTTCACACTCTTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: NRACGGSHSPSI*SALKSIFTLFG Trigger: CCCAAAGAGTGTGAAGATAGACTTCAGTGCTGACCAGATCGAAGGTGAGTGTGAACCACCGCACGCTCTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130588.8 |
||
| CDS CCA 72 bp | AATTTCCTTCTCTGGAAAATGCAACAGAGCGTGCGGTaGTTCACACTCACCTTCGATCTGGTCAGCACTGAA | + |
|
Preference number: 6 (lower is better) Translates to: NFLLWKMQQSVR*FTLTFDLVSTE Trigger: TTCAGTGCTGACCAGATCGAAGGTGAGTGTGAACCACCGCACGCTCTGTTGCATTTTCCAGAGAAGGAAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130588.8 |
||