Pregenerated sensors for MYL3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000059741Ensembl transcript IDs: ENSMUST00000079784.12, ENSMUST00000136695.3
Found 39 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | GGTAAGCCCATCCCAGCAGGGGCCAGGAAAGACTACCACACACAGAGTGATCCAGGGAGATGCTTGGCCTaGCCTGGGCTTCCTGAGAGG | + |
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Preference number: 2 (lower is better) Translates to: GKPIPAGARKDYHTQSDPGRCLA*PGLPER Trigger: CCTCTCAGGAAGCCCAGGGCAGGCCAAGCATCTCCC...TGGATCACTCTGTGTGTGGTAGTCTTTCCTGGCCCCTGCTGGGATGGGCTTACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079784.12 |
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| 3UTR-3UTR CCA 90 bp | AGGACAACCTGCAGGAGTCCGAACCACTCCTTCCCGAAGCTCCAGACATGGTGTTGGTTGGGAGATGCTTaGCCTGCCCTGGGCTTCCTG | + |
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Preference number: 2 (lower is better) Translates to: RTTCRSPNHSFPKLQTWCWLGDA*PALGFL Trigger: CAGGAAGCCCAGGGCAGGCCAAGCATCTCCCAACCA...ACACCATGTCTGGAGCTTCGGGAAGGAGTGGTTCGGACTCCTGCAGGTTGTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079784.12 |
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| 3UTR-3UTR CCA 90 bp | AGGGTGGATACAGAAAGGCAAGCACAGGTAGGTAAGCCCATCCCAGCAGGGGCCTGTCAGCATCATGGTTaGGAGATGCTTGGCCTGCCC | + |
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Preference number: 2 (lower is better) Translates to: RVDTERQAQVGKPIPAGACQHHG*EMLGLP Trigger: GGGCAGGCCAAGCATCTCCCAACCATGATGCTGACA...GGCCCCTGCTGGGATGGGCTTACCTACCTGTGCTTGCCTTTCTGTATCCACCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079784.12 |
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| 3UTR-3UTR CAA 90 bp | CCTGCAGGAGTCCGAACCACTCCTTCCCGAAGCTCCAGACATGGTGTCAGCATCATGGTTGGGAGATGCTaGGCCTGCCCTGGGCTTCCT | + |
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Preference number: 3 (lower is better) Translates to: PAGVRTTPSRSSRHGVSIMVGRC*ACPGLP Trigger: AGGAAGCCCAGGGCAGGCCAAGCATCTCCCAACCAT...GATGCTGACACCATGTCTGGAGCTTCGGGAAGGAGTGGTTCGGACTCCTGCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079784.12 |
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| 3UTR TCA 72 bp | CCCAGCAGGGGCCAGGAAAGACTACCACACACAGAGTaGTCCAGGACAACCTGCAGGAGTCCGAACCACTCC | + |
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Preference number: 3 (lower is better) Translates to: PSRGQERLPHTE*SRTTCRSPNHS Trigger: GGAGTGGTTCGGACTCCTGCAGGTTGTCCTGGATCACTCTGTGTGTGGTAGTCTTTCCTGGCCCCTGCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079784.12 |
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| 3UTR CCA 72 bp | CTCCTTCCCGAAGCTCCAGACATGGTGTCAGCATCATaGTTGGGAGATGCTTGGCCTGCCCTGGGCTTCCTG | + |
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Preference number: 3 (lower is better) Translates to: LLPEAPDMVSAS*LGDAWPALGFL Trigger: CAGGAAGCCCAGGGCAGGCCAAGCATCTCCCAACCATGATGCTGACACCATGTCTGGAGCTTCGGGAAGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079784.12 ENSMUST00000136695.3 |
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| 3UTR-3UTR CAA 90 bp | CAGGGGCCAGGAAAGACTACCACACACAGAGTGATCCAGGACAACCTGCAGGAGGTGTCAGCATCATGGTaGGGAGATGCTTGGCCTGCC | + |
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Preference number: 3 (lower is better) Translates to: QGPGKTTTHRVIQDNLQEVSASW*GDAWPA Trigger: GGCAGGCCAAGCATCTCCCAACCATGATGCTGACAC...CTCCTGCAGGTTGTCCTGGATCACTCTGTGTGTGGTAGTCTTTCCTGGCCCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079784.12 |
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| CDS-3UTR CCA 90 bp | CATGGTGTCAGCATCATGGTTGGGAGATGCTTGGCCTGCCCTGGGCTTCCTGAGTGCAGCCGCAGGAGCTaGAGCTGCTTTGGGGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: HGVSIMVGRCLACPGLPECSRRS*SCFGGS Trigger: GCTGCCCCCAAAGCAGCTCCAGCTCCTGCGGCTGCA...CTCAGGAAGCCCAGGGCAGGCCAAGCATCTCCCAACCATGATGCTGACACCATG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079784.12 |
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| CDS-3UTR TCA 90 bp | CCAGCAGGGGCCAGGAAAGACTACCACACACAGAGTGATCCAGGACAACCTGCAGCCTGGGTAGGATTCTaGCCCAGAGCCCGCAGGACA | + |
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Preference number: 4 (lower is better) Translates to: PAGARKDYHTQSDPGQPAAWVGF*PRARRT Trigger: TGTCCTGCGGGCTCTGGGTCAGAATCCTACCCAGGC...TGCAGGTTGTCCTGGATCACTCTGTGTGTGGTAGTCTTTCCTGGCCCCTGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079784.12 |
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| CDS-3UTR TCA 90 bp | GTCCGAACCACTCCTTCCCGAAGCTCCAGACATGGTGTCAGCATCATGGTTGGGGCCTGGGTAGGATTCTaGCCCAGAGCCCGCAGGACA | + |
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Preference number: 4 (lower is better) Translates to: VRTTPSRSSRHGVSIMVGAWVGF*PRARRT Trigger: TGTCCTGCGGGCTCTGGGTCAGAATCCTACCCAGGC...CCCAACCATGATGCTGACACCATGTCTGGAGCTTCGGGAAGGAGTGGTTCGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079784.12 ENSMUST00000136695.3 |
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| CDS-3UTR CCA 90 bp | AGCCCATCCCAGCAGGGGCCAGGAAAGACTACCACACACAGAGTGATCCAGGACCAAACTCGGCTTCCTTaGGGCGCTCAGGCTCTGGTG | + |
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Preference number: 4 (lower is better) Translates to: SPSQQGPGKTTTHRVIQDQTRLP*GAQALV Trigger: CACCAGAGCCTGAGCGCCCCAAGGAAGCCGAGTTTG...GTCCTGGATCACTCTGTGTGTGGTAGTCTTTCCTGGCCCCTGCTGGGATGGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079784.12 |
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| CDS-3UTR CCA 90 bp | CCGAACCACTCCTTCCCGAAGCTCCAGACATGGTGTCAGCATCATGGTTGGGAGGTCTCTCACCCAGCGTaGCCAGCACGTGTCGGAGCT | + |
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Preference number: 4 (lower is better) Translates to: PNHSFPKLQTWCQHHGWEVSHPA*PARVGA Trigger: AGCTCCGACACGTGCTGGCCACGCTGGGTGAGAGAC...CTCCCAACCATGATGCTGACACCATGTCTGGAGCTTCGGGAAGGAGTGGTTCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079784.12 ENSMUST00000136695.3 |
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| CDS-3UTR GCA 90 bp | GGAGTCCGAACCACTCCTTCCCGAAGCTCCAGACATGGTGTCAGCATCATGGTTCGCAGGAGCTGGAGCTaGTTTGGGGGCAGCCGCTTT | + |
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Preference number: 4 (lower is better) Translates to: GVRTTPSRSSRHGVSIMVRRSWS*FGGSRF Trigger: AAAGCGGCTGCCCCCAAAGCAGCTCCAGCTCCTGCG...AACCATGATGCTGACACCATGTCTGGAGCTTCGGGAAGGAGTGGTTCGGACTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079784.12 |
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| CDS-3UTR CCA 90 bp | GCAGGGGCCAGGAAAGACTACCACACACAGAGTGATCCAGGACAACCTGCAGGAGAGCTGGAGCTGCTTTaGGGGCAGCCGCTTTGGCAT | + |
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Preference number: 4 (lower is better) Translates to: AGARKDYHTQSDPGQPAGELELL*GQPLWH Trigger: ATGCCAAAGCGGCTGCCCCCAAAGCAGCTCCAGCTC...TCCTGCAGGTTGTCCTGGATCACTCTGTGTGTGGTAGTCTTTCCTGGCCCCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079784.12 |
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| CDS-3UTR CCA 90 bp | GAGTCCGAACCACTCCTTCCCGAAGCTCCAGACATGGTGTCAGCATCATGGTTGGTCTCTCACCCAGCGTaGCCAGCACGTGTCGGAGCT | + |
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Preference number: 4 (lower is better) Translates to: ESEPLLPEAPDMVSASWLVSHPA*PARVGA Trigger: AGCTCCGACACGTGCTGGCCACGCTGGGTGAGAGAC...CAACCATGATGCTGACACCATGTCTGGAGCTTCGGGAAGGAGTGGTTCGGACTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079784.12 ENSMUST00000136695.3 |
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| CDS-3UTR GCA 90 bp | CTCCTTCCCGAAGCTCCAGACATGGTGTCAGCATCATGGTTGGGAGATGCTTGGTCTCGCCCTTGGGTGTaGGGTCGAACAGCAGGAAGG | + |
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Preference number: 4 (lower is better) Translates to: LLPEAPDMVSASWLGDAWSRPWV*GRTAGR Trigger: CCTTCCTGCTGTTCGACCGCACACCCAAGGGCGAGA...CCAAGCATCTCCCAACCATGATGCTGACACCATGTCTGGAGCTTCGGGAAGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079784.12 |
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| CDS-3UTR GCA 90 bp | CTCCTTCCCGAAGCTCCAGACATGGTGTCAGCATCATGGTTGGGAGATGCTTGGCACGTGTCGGAGCTCTaGACCCATGACCGTGCCGTT | + |
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Preference number: 4 (lower is better) Translates to: LLPEAPDMVSASWLGDAWHVSEL*THDRAV Trigger: AACGGCACGGTCATGGGTGCAGAGCTCCGACACGTG...CCAAGCATCTCCCAACCATGATGCTGACACCATGTCTGGAGCTTCGGGAAGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079784.12 ENSMUST00000136695.3 |
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| CDS-3UTR CCA 90 bp | CACAGAGTGATCCAGGACAACCTGCAGGAGTCCGAACCACTCCTTCCCGAAGCTTGGGGGCAGCCGCTTTaGCATCATCCTTCTTGGGCT | + |
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Preference number: 4 (lower is better) Translates to: HRVIQDNLQESEPLLPEAWGQPL*HHPSWA Trigger: AGCCCAAGAAGGATGATGCCAAAGCGGCTGCCCCCA...AGCTTCGGGAAGGAGTGGTTCGGACTCCTGCAGGTTGTCCTGGATCACTCTGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079784.12 |
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| CDS-3UTR TCA 90 bp | GCAGGAGTCCGAACCACTCCTTCCCGAAGCTCCAGACATGGTGTCAGCATCATGCACACTGCCCGTATGTaGTCTTCATCTCGCCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: AGVRTTPSRSSRHGVSIMHTARM*SSSRPW Trigger: CCAAGGGCGAGATGAAGATCACATACGGGCAGTGTG...CATGATGCTGACACCATGTCTGGAGCTTCGGGAAGGAGTGGTTCGGACTCCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079784.12 |
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| CDS-3UTR TCA 90 bp | GTGGATACAGAAAGGCAAGCACAGGTAGGTAAGCCCATCCCAGCAGGGGCCAGGCCGTTGGAGTCCTCTTaGCCAGCCATCAGTTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: VDTERQAQVGKPIPAGARPLESS*PAISFS Trigger: AGAGAAACTGATGGCTGGTCAAGAGGACTCCAACGG...CCTGGCCCCTGCTGGGATGGGCTTACCTACCTGTGCTTGCCTTTCTGTATCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079784.12 |
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| CDS-3UTR GCA 90 bp | CCAGGACAACCTGCAGGAGTCCGAACCACTCCTTCCCGAAGCTCCAGACATGGTCGAAGTCCTCGTACGTaGCAGTGTCCTTGTTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: PGQPAGVRTTPSRSSRHGRSPRT*QCPCSW Trigger: CCAAGAACAAGGACACTGGCACGTACGAGGACTTCG...ACCATGTCTGGAGCTTCGGGAAGGAGTGGTTCGGACTCCTGCAGGTTGTCCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079784.12 |
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| CDS-3UTR GCA 90 bp | ACTCCTTCCCGAAGCTCCAGACATGGTGTCAGCATCATGGTTGGGAGATGCTTGCACGTGTCGGAGCTCTaGACCCATGACCGTGCCGTT | + |
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Preference number: 4 (lower is better) Translates to: TPSRSSRHGVSIMVGRCLHVSEL*THDRAV Trigger: AACGGCACGGTCATGGGTGCAGAGCTCCGACACGTG...CAAGCATCTCCCAACCATGATGCTGACACCATGTCTGGAGCTTCGGGAAGGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079784.12 ENSMUST00000136695.3 |
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| CDS-3UTR CCA 90 bp | GACAACCTGCAGGAGTCCGAACCACTCCTTCCCGAAGCTCCAGACATGGTGTCAGAGCTCTTCCTGTTTTaGCTTCCCCAGGACACGGAG | + |
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Preference number: 4 (lower is better) Translates to: DNLQESEPLLPEAPDMVSELFLF*LPQDTE Trigger: CTCCGTGTCCTGGGGAAGCCAAAACAGGAAGAGCTC...TGACACCATGTCTGGAGCTTCGGGAAGGAGTGGTTCGGACTCCTGCAGGTTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079784.12 |
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| CDS-3UTR CCA 90 bp | AGGAGTCCGAACCACTCCTTCCCGAAGCTCCAGACATGGTGTCAGCATCATGGTGAGCTCTTCCTGTTTTaGCTTCCCCAGGACACGGAG | + |
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Preference number: 4 (lower is better) Translates to: RSPNHSFPKLQTWCQHHGELFLF*LPQDTE Trigger: CTCCGTGTCCTGGGGAAGCCAAAACAGGAAGAGCTC...ACCATGATGCTGACACCATGTCTGGAGCTTCGGGAAGGAGTGGTTCGGACTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079784.12 ENSMUST00000136695.3 |
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| CDS-3UTR CCA 90 bp | CATGGTGTCAGCATCATGGTTGGGAGATGCTTGGCCTGCCCTGGGCTTCCTGAGTTCTTGGAGATGTGCTaGAGCATAGGCAGGAACGTC | + |
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Preference number: 4 (lower is better) Translates to: HGVSIMVGRCLACPGLPEFLEMC*SIGRNV Trigger: GACGTTCCTGCCTATGCTCCAGCACATCTCCAAGAA...CTCAGGAAGCCCAGGGCAGGCCAAGCATCTCCCAACCATGATGCTGACACCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079784.12 ENSMUST00000136695.3 |
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| CDS-3UTR CCA 90 bp | ACTCCTTCCCGAAGCTCCAGACATGGTGTCAGCATCATGGTTGGGAGATGCTTGTCTTCATCTCGCCCTTaGGTGTGCGGTCGAACAGCA | + |
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Preference number: 4 (lower is better) Translates to: TPSRSSRHGVSIMVGRCLSSSRP*VCGRTA Trigger: TGCTGTTCGACCGCACACCCAAGGGCGAGATGAAGA...CAAGCATCTCCCAACCATGATGCTGACACCATGTCTGGAGCTTCGGGAAGGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079784.12 |
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| CDS-3UTR TCA 90 bp | TCCTTCCCGAAGCTCCAGACATGGTGTCAGCATCATGGTTGGGAGATGCTTGGCGCAGGAAGGCCTCCTTaGACTCTTCAATCTGTTCAG | + |
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Preference number: 4 (lower is better) Translates to: SFPKLQTWCQHHGWEMLGAGRPP*TLQSVQ Trigger: CTGAACAGATTGAAGAGTTCAAGGAGGCCTTCCTGC...GCCAAGCATCTCCCAACCATGATGCTGACACCATGTCTGGAGCTTCGGGAAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079784.12 |
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| CDS-3UTR GCA 90 bp | ACAACCTGCAGGAGTCCGAACCACTCCTTCCCGAAGCTCCAGACATGGTGTCAGTTGTTCTTGGAGATGTaGTGGAGCATAGGCAGGAAC | + |
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Preference number: 4 (lower is better) Translates to: TTCRSPNHSFPKLQTWCQLFLEM*WSIGRN Trigger: GTTCCTGCCTATGCTCCAGCACATCTCCAAGAACAA...CTGACACCATGTCTGGAGCTTCGGGAAGGAGTGGTTCGGACTCCTGCAGGTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079784.12 |
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| CDS-3UTR CCA 90 bp | ATCCCAGCAGGGGCCAGGAAAGACTACCACACACAGAGTGATCCAGGACAACCTTTCTTGGAGATGTGCTaGAGCATAGGCAGGAACGTC | + |
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Preference number: 4 (lower is better) Translates to: IPAGARKDYHTQSDPGQPFLEMC*SIGRNV Trigger: GACGTTCCTGCCTATGCTCCAGCACATCTCCAAGAA...AGGTTGTCCTGGATCACTCTGTGTGTGGTAGTCTTTCCTGGCCCCTGCTGGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079784.12 |
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| CDS-3UTR GCA 90 bp | CTCCTTCCCGAAGCTCCAGACATGGTGTCAGCATCATGGTTGGGAGATGCTTGGTTGTTCTTGGAGATGTaGTGGAGCATAGGCAGGAAC | + |
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Preference number: 4 (lower is better) Translates to: LLPEAPDMVSASWLGDAWLFLEM*WSIGRN Trigger: GTTCCTGCCTATGCTCCAGCACATCTCCAAGAACAA...CCAAGCATCTCCCAACCATGATGCTGACACCATGTCTGGAGCTTCGGGAAGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079784.12 ENSMUST00000136695.3 |
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| CDS-3UTR CAA 90 bp | GTGATCCAGGACAACCTGCAGGAGTCCGAACCACTCCTTCCCGAAGCTCCAGACATCTTCATCTCGCCCTaGGGTGTGCGGTCGAACAGC | + |
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Preference number: 5 (lower is better) Translates to: VIQDNLQESEPLLPEAPDIFISP*GVRSNS Trigger: GCTGTTCGACCGCACACCCAAGGGCGAGATGAAGAT...GTCTGGAGCTTCGGGAAGGAGTGGTTCGGACTCCTGCAGGTTGTCCTGGATCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079784.12 |
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| CDS-3UTR CAA 90 bp | AGGAGTCCGAACCACTCCTTCCCGAAGCTCCAGACATGGTGTCAGCATCATGGTTCAAACTCGGCTTCCTaGGGGCGCTCAGGCTCTGGT | + |
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Preference number: 5 (lower is better) Translates to: RSPNHSFPKLQTWCQHHGSNSAS*GRSGSG Trigger: ACCAGAGCCTGAGCGCCCCAAGGAAGCCGAGTTTGA...ACCATGATGCTGACACCATGTCTGGAGCTTCGGGAAGGAGTGGTTCGGACTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079784.12 |
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| CDS-3UTR CAA 90 bp | GTGTCAGCATCATGGTTGGGAGATGCTTGGCCTGCCCTGGGCTTCCTGAGAGGCTACGTGCCAGTGTCCTaGTTCTTGGAGATGTGCTGG | + |
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Preference number: 5 (lower is better) Translates to: VSASWLGDAWPALGFLRGYVPVS*FLEMCW Trigger: CCAGCACATCTCCAAGAACAAGGACACTGGCACGTA...GCCTCTCAGGAAGCCCAGGGCAGGCCAAGCATCTCCCAACCATGATGCTGACAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079784.12 ENSMUST00000136695.3 |
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| CDS-3UTR CAA 90 bp | CAGGGGCCAGGAAAGACTACCACACACAGAGTGATCCAGGACAACCTGCAGGAGGCCGTTGGAGTCCTCTaGACCAGCCATCAGTTTCTC | + |
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Preference number: 5 (lower is better) Translates to: QGPGKTTTHRVIQDNLQEAVGVL*TSHQFL Trigger: GAGAAACTGATGGCTGGTCAAGAGGACTCCAACGGC...CTCCTGCAGGTTGTCCTGGATCACTCTGTGTGTGGTAGTCTTTCCTGGCCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079784.12 |
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| CDS-3UTR CAA 90 bp | GTCCGAACCACTCCTTCCCGAAGCTCCAGACATGGTGTCAGCATCATGGTTGGGGCCGTTGGAGTCCTCTaGACCAGCCATCAGTTTCTC | + |
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Preference number: 5 (lower is better) Translates to: VRTTPSRSSRHGVSIMVGAVGVL*TSHQFL Trigger: GAGAAACTGATGGCTGGTCAAGAGGACTCCAACGGC...CCCAACCATGATGCTGACACCATGTCTGGAGCTTCGGGAAGGAGTGGTTCGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079784.12 ENSMUST00000136695.3 |
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| CDS-3UTR CAA 90 bp | ATCCAGGACAACCTGCAGGAGTCCGAACCACTCCTTCCCGAAGCTCCAGACATGTACGTGCCAGTGTCCTaGTTCTTGGAGATGTGCTGG | + |
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Preference number: 5 (lower is better) Translates to: IQDNLQESEPLLPEAPDMYVPVS*FLEMCW Trigger: CCAGCACATCTCCAAGAACAAGGACACTGGCACGTA...CATGTCTGGAGCTTCGGGAAGGAGTGGTTCGGACTCCTGCAGGTTGTCCTGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079784.12 |
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| CDS-3UTR CAA 90 bp | AGTGATCCAGGACAACCTGCAGGAGTCCGAACCACTCCTTCCCGAAGCTCCAGACCAGTGTCCTTGTTCTaGGAGATGTGCTGGAGCATA | + |
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Preference number: 5 (lower is better) Translates to: SDPGQPAGVRTTPSRSSRPVSLF*EMCWSI Trigger: TATGCTCCAGCACATCTCCAAGAACAAGGACACTGG...TCTGGAGCTTCGGGAAGGAGTGGTTCGGACTCCTGCAGGTTGTCCTGGATCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079784.12 |
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| CDS-3UTR CAA 90 bp | CATGGTGTCAGCATCATGGTTGGGAGATGCTTGGCCTGCCCTGGGCTTCCTGAGTCCATCATCTTGGAATaGAGCTCTTCCTGTTTTGGC | + |
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Preference number: 5 (lower is better) Translates to: HGVSIMVGRCLACPGLPESIILE*SSSCFG Trigger: GCCAAAACAGGAAGAGCTCAATTCCAAGATGATGGA...CTCAGGAAGCCCAGGGCAGGCCAAGCATCTCCCAACCATGATGCTGACACCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079784.12 ENSMUST00000136695.3 |
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| CDS-3UTR CAA 90 bp | CCACTCCTTCCCGAAGCTCCAGACATGGTGTCAGCATCATGGTTGGGAGATGCTTCCATCATCTTGGAATaGAGCTCTTCCTGTTTTGGC | + |
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Preference number: 5 (lower is better) Translates to: PLLPEAPDMVSASWLGDASIILE*SSSCFG Trigger: GCCAAAACAGGAAGAGCTCAATTCCAAGATGATGGA...AGCATCTCCCAACCATGATGCTGACACCATGTCTGGAGCTTCGGGAAGGAGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079784.12 ENSMUST00000136695.3 |
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